1092
10000
1 77508786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7373;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77508903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0629;AVGPOST=0.9994;RSQ=0.9951;ERATE=0.0004;THETA=0.0003;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 77508917 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3983;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=868;AN=2184 GT:DS:GL:BD 0.39743590 0
1 77508948 . A AAT 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77508973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6241;ERATE=0.0006;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77509126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5841;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77509194 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77509224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77509263 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8841;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77509334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8936;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77509517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1939;AVGPOST=0.9982;RSQ=0.9954;ERATE=0.0005;THETA=0.0009;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 77509525 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8036;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77509560 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7588;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77509599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77509618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77509670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8853;ERATE=0.0014;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77509681 . CT C 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.5804;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77509689 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77509736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9270;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77509780 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77509836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77509984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77510003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77510008 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0211;AVGPOST=0.9996;RSQ=0.9916;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77510016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.7623;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77510062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8852;ERATE=0.0011;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77510111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77510119 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77510175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77510267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77510526 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77510613 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6387;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77510628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6151;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77510647 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8070;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77510771 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77510775 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77510895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3902;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77510998 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77511047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77511157 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3271;AVGPOST=0.9965;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 77511200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8121;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77511263 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.9113;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77511347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77511360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0108;AVGPOST=0.9987;RSQ=0.9587;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77511532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8586;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77511551 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77511560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5215;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77511588 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77511651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77511792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8567;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77511815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7312;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77511827 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0704;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 77511970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77512084 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9893;ERATE=0.0003;THETA=0.0027;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77512145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0112;AVGPOST=0.9990;RSQ=0.9685;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77512196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9990;RSQ=0.9759;ERATE=0.0003;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77512451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77512572 . A AT 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5402;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77512593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6457;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77512604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9336;ERATE=0.0004;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77512810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7215;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77512835 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8758;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77513034 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7604;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77513040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77513059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0045;AVGPOST=0.9987;RSQ=0.8583;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77513104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77513192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77513463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8635;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77513498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0817;AVGPOST=0.9954;RSQ=0.9783;ERATE=0.0006;THETA=0.0008;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 77513604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0285;AVGPOST=0.9993;RSQ=0.9895;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77513616 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77513642 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8280;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77513703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77513708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7785;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77513749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0086;AVGPOST=0.9991;RSQ=0.9573;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77513808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77513967 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0556;AVGPOST=0.9992;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 77513981 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77514000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7985;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77514104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0136;AVGPOST=0.9991;RSQ=0.9774;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77514203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1873;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0004;THETA=0.0005;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 77514327 . GCCC G 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5515;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77514352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9572;ERATE=0.0003;THETA=0.0026;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77514368 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8594;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77514452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77514455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4029;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=880;AN=2184 GT:DS:GL:BD 0.40293041 0
1 77514463 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77514466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9771;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77514502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77514631 . A AC 20096 PASS INDEL;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.4018;AVGPOST=0.9931;RSQ=0.9892;ERATE=0.0005;THETA=0.0006;AC=876;AN=2184 GT:DS:GL:BD 0.40109891 0
1 77514632 rs76014444 C CG 49075 PASS INDEL;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.4023;AVGPOST=0.9846;RSQ=0.9767;ERATE=0.0035;THETA=0.0004;AC=874;AN=2184 GT:DS:GL:BD 0.40018314 0
1 77514661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77514828 . A AT 61 PASS INDEL;BAVGPOST=0.984;BRSQ=0.547;LDAF=0.0274;AVGPOST=0.9646;RSQ=0.4774;ERATE=0.0095;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77515048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77515084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0291;AVGPOST=0.9990;RSQ=0.9844;ERATE=0.0005;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77515090 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77515138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8345;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77515196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9307;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77515228 . GA G 2344 PASS INDEL;BAVGPOST=0.996;BRSQ=0.968;LDAF=0.0234;AVGPOST=0.9956;RSQ=0.9236;ERATE=0.0005;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 77515266 . TA T 2465 PASS INDEL;BAVGPOST=0.988;BRSQ=0.730;LDAF=0.0245;AVGPOST=0.9876;RSQ=0.7917;ERATE=0.0010;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 77515276 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9834;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77515359 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0345;AVGPOST=0.9990;RSQ=0.9883;ERATE=0.0003;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 77515982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77515997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77516081 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77516085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77516138 . TCTAA T 105 PASS INDEL;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7749;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77516274 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77516340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0152;AVGPOST=0.9984;RSQ=0.9509;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77516483 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9598;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77516819 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77516848 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9071;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77516849 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7116;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77516853 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77516926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9069;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77516949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9501;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77516959 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6858;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77517009 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0346;AVGPOST=0.9985;RSQ=0.9838;ERATE=0.0003;THETA=0.0014;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 77517124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77517175 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4060;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0008;AC=886;AN=2184 GT:DS:GL:BD 0.40567765 0
1 77517187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77517217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8653;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77517238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77517277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6920;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77517349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8291;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77517399 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77517444 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5586;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77517512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0106;AVGPOST=0.9969;RSQ=0.8946;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77517513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5404;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77517542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0051;AVGPOST=0.9994;RSQ=0.9477;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77517709 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9994;RSQ=0.9708;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77517807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77517840 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77517865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0053;AVGPOST=0.9970;RSQ=0.7959;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77517876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7111;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77517887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0104;AVGPOST=0.9993;RSQ=0.9752;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77518136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7063;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77518202 . G GTATT 7413 PASS INDEL;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0350;AVGPOST=0.9977;RSQ=0.9762;ERATE=0.0003;THETA=0.0031;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 77518203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0338;AVGPOST=0.9965;RSQ=0.9635;ERATE=0.0003;THETA=0.0008;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 77518203 . C CAGTATTCAGT 14098 PASS INDEL;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0349;AVGPOST=0.9976;RSQ=0.9742;ERATE=0.0003;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 77518225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1689;AVGPOST=0.9929;RSQ=0.9820;ERATE=0.0003;THETA=0.0007;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 77518321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6307;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77518471 . G GT 304 PASS INDEL;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0042;AVGPOST=0.9985;RSQ=0.8476;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77518496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0188;AVGPOST=0.9991;RSQ=0.9794;ERATE=0.0004;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77518510 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0554;AVGPOST=0.9994;RSQ=0.9944;ERATE=0.0004;THETA=0.0005;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 77518518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8821;ERATE=0.0003;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77518597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.933;LDAF=0.0331;AVGPOST=0.9968;RSQ=0.9596;ERATE=0.0004;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 77518620 . AAAAAC A 4495 PASS INDEL;BAVGPOST=0.913;BRSQ=0.785;LDAF=0.2687;AVGPOST=0.8551;RSQ=0.7110;ERATE=0.0394;THETA=0.0004;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 77518686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0233;AVGPOST=0.9993;RSQ=0.9875;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 77518733 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8786;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77518815 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77518902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6681;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77518958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77519068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77519089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0131;AVGPOST=0.9993;RSQ=0.9798;ERATE=0.0003;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77519194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77519243 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9632;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77519348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9973;RSQ=0.8808;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77519377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0099;AVGPOST=0.9987;RSQ=0.9482;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77519455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0315;AVGPOST=0.9988;RSQ=0.9822;ERATE=0.0004;THETA=0.0007;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 77519553 rs56155335 CT C 8632 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0563;AVGPOST=0.9993;RSQ=0.9940;ERATE=0.0003;THETA=0.0002;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 77519620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77519881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7863;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77519984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.928;LDAF=0.0192;AVGPOST=0.9948;RSQ=0.9039;ERATE=0.0004;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77520066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77520088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.8388;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77520171 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77520374 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5301;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77520381 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6765;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77520428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4722;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77520488 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77520584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0647;AVGPOST=0.9975;RSQ=0.9853;ERATE=0.0006;THETA=0.0004;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 77520626 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0248;AVGPOST=0.9973;RSQ=0.9594;ERATE=0.0004;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 77520631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77520927 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7747;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77520990 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77521004 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8913;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77521033 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9402;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77521091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77521138 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4755;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77521349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9196;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77521368 rs55848854 CCT C 9663 PASS INDEL;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0570;AVGPOST=0.9971;RSQ=0.9807;ERATE=0.0004;THETA=0.0008;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 77521369 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8599;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77521440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9996;RSQ=0.8685;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77521496 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6330;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77521497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.7134;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77521643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7890;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77521663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77521957 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.9108;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77521986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77522013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9988;RSQ=0.9481;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77522015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4117;AVGPOST=0.9977;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 77522046 . A AC 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77522161 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77522211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5607;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77522267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0387;AVGPOST=0.9992;RSQ=0.9915;ERATE=0.0003;THETA=0.0006;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 77522375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77522505 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9177;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77522552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.949;LDAF=0.0151;AVGPOST=0.9980;RSQ=0.9499;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77522662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5023;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77522665 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0063;AVGPOST=0.9995;RSQ=0.9718;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77522880 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5204;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77522944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3275;AVGPOST=0.9966;RSQ=0.9942;ERATE=0.0014;THETA=0.0003;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 77522970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8666;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77522971 . GA G 795 PASS INDEL;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0116;AVGPOST=0.9963;RSQ=0.8773;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77523083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77523145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1133;AVGPOST=0.9971;RSQ=0.9885;ERATE=0.0004;THETA=0.0006;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 77523310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77523328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9831;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77523491 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0122;AVGPOST=0.9971;RSQ=0.9062;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77523618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0004;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77523625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6066;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77523690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77523775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9983;RSQ=0.8946;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77523797 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9517;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77523973 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6161;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77524028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0080;AVGPOST=0.9972;RSQ=0.8674;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77524193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.540;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5830;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77524318 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4106;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0007;THETA=0.0005;AC=896;AN=2184 GT:DS:GL:BD 0.41025642 0
1 77524345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4846;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77524593 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77524621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77524766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.6712;AVGPOST=0.9777;RSQ=0.9648;ERATE=0.0013;THETA=0.0003;AC=1464;AN=2184 GT:DS:GL:BD 0.67032969 1
1 77524768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6317;ERATE=0.0007;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77524905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5720;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77524938 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0378;AVGPOST=0.9993;RSQ=0.9923;ERATE=0.0003;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 77524959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2920;AVGPOST=0.9980;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 77524974 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0188;AVGPOST=0.9991;RSQ=0.9788;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77525005 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77525020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0038;AVGPOST=0.9993;RSQ=0.9158;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77525114 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6765;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77525131 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0388;AVGPOST=0.9983;RSQ=0.9810;ERATE=0.0005;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 77525202 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=0.9997;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 77525211 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3896;AVGPOST=0.9980;RSQ=0.9967;ERATE=0.0005;THETA=0.0008;AC=851;AN=2184 GT:DS:GL:BD 0.38965201 0
1 77525225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7784;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77525425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0291;AVGPOST=0.9993;RSQ=0.9881;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77525452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77525527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8441;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77525535 . GTTTA G 154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5209;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77525690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5542;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77525727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9845;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77525743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8819;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77525792 . G GA 2243 PASS INDEL;BAVGPOST=0.990;BRSQ=0.903;LDAF=0.0578;AVGPOST=0.9696;RSQ=0.7890;ERATE=0.0062;THETA=0.0006;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 77525826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77525858 . T TG 753 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9445;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77525921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.8986;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77525925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77525986 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0062;AVGPOST=0.9992;RSQ=0.9485;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77526011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7913;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77526121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6602;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77526146 . G GT 1940 PASS INDEL;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0095;AVGPOST=0.9963;RSQ=0.8464;ERATE=0.0006;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77526188 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77526213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7993;ERATE=0.0003;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77526221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0038;AVGPOST=0.9985;RSQ=0.8265;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77526242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0422;AVGPOST=0.9987;RSQ=0.9866;ERATE=0.0004;THETA=0.0067;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 77526340 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6944;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77526472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0089;AVGPOST=0.9936;RSQ=0.7206;ERATE=0.0018;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77526482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4079;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0005;THETA=0.0004;AC=890;AN=2184 GT:DS:GL:BD 0.40750915 0
1 77526607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77526723 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6692;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77526871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0049;AVGPOST=0.9976;RSQ=0.7864;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77527167 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77527295 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8593;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77527428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77527490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4118;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0005;THETA=0.0002;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 77527526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.976;LDAF=0.0879;AVGPOST=0.9931;RSQ=0.9678;ERATE=0.0004;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 77527596 . T TG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77527619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6638;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77527703 . TC T 497 PASS INDEL;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9087;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77527757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0142;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77527758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77528100 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77528168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7747;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77528189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8383;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77528404 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77528426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4116;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0003;THETA=0.0025;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 77528463 . G GA 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6451;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77528500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77528654 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77528901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77528915 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77529024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.6956;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77529138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8529;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77529288 . G GTA 1680 PASS INDEL;BAVGPOST=0.997;BRSQ=0.921;LDAF=0.0183;AVGPOST=0.9992;RSQ=0.9821;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77529293 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.897;LDAF=0.0182;AVGPOST=0.9984;RSQ=0.9650;ERATE=0.0004;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77529294 . TAA T 1160 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0183;AVGPOST=0.9994;RSQ=0.9865;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77529298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77529321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6274;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77529356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77529358 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9765;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77529367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0128;AVGPOST=0.9973;RSQ=0.9127;ERATE=0.0006;THETA=0.0017;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77529461 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6611;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77529565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.8793;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77529583 . TG T 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5096;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77529652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6751;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77529653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7194;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77529667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77529696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77530081 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8542;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77530294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0046;AVGPOST=0.9994;RSQ=0.9372;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77530295 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5400;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77530389 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77530395 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9990;RSQ=0.9486;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77530463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0543;AVGPOST=0.9989;RSQ=0.9903;ERATE=0.0003;THETA=0.0004;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 77530742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7193;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77530966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.860;LDAF=0.0177;AVGPOST=0.9933;RSQ=0.8602;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77530988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5895;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77531011 . ATCTG A 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77531120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5926;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77531157 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0180;AVGPOST=0.9989;RSQ=0.9761;ERATE=0.0004;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77531207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8461;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77531223 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1974;AVGPOST=0.9969;RSQ=0.9918;ERATE=0.0008;THETA=0.0011;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 77531643 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0017;AVGPOST=0.9997;RSQ=0.9431;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77531705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77531713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.919;LDAF=0.0499;AVGPOST=0.9916;RSQ=0.9389;ERATE=0.0007;THETA=0.0014;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 77531714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4110;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0004;THETA=0.0006;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 77531780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4115;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 77531821 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77531837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7397;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77532004 . GTC G 236 PASS INDEL;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8662;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77532243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6460;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77532376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77532388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77532418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5296;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77532419 . T TG 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7398;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77532449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0103;AVGPOST=0.9991;RSQ=0.9702;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77532511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77532553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4110;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 77532580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0539;AVGPOST=0.9988;RSQ=0.9903;ERATE=0.0003;THETA=0.0007;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 77532595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0183;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77532602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4112;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0007;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 77532703 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.564;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6030;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77532816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77532843 rs72506819 T TG 34106 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4115;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0006;THETA=0.0008;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 77532885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7600;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77532897 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0121;AVGPOST=0.9968;RSQ=0.9200;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77532978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8128;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77533061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7882;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77533131 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8629;ERATE=0.0003;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77533195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77533288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77533294 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6089;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77533312 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6273;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77533355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7523;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77533484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.7275;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77533485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.916;LDAF=0.0168;AVGPOST=0.9964;RSQ=0.9171;ERATE=0.0005;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77533488 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4600;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77533619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8818;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77533728 rs3067299 GAAAC G 33187 PASS INDEL;BAVGPOST=0.986;BRSQ=0.977;LDAF=0.3098;AVGPOST=0.9879;RSQ=0.9782;ERATE=0.0032;THETA=0.0015;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 77533739 rs60568268 AC A 6175 PASS INDEL;BAVGPOST=0.942;BRSQ=0.860;LDAF=0.2569;AVGPOST=0.9346;RSQ=0.8768;ERATE=0.0114;THETA=0.0009;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 77533747 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0141;AVGPOST=0.9995;RSQ=0.9868;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77533747 . AC A 170 PASS INDEL;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.7041;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77533757 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6879;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77533761 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77533909 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0534;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 77533941 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6249;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77533991 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8839;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77533994 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0074;AVGPOST=0.9985;RSQ=0.9188;ERATE=0.0003;THETA=0.0014;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77534051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0726;AVGPOST=0.9975;RSQ=0.9871;ERATE=0.0004;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 77534108 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.7185;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77534304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6068;ERATE=0.0015;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77534305 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0077;AVGPOST=0.9988;RSQ=0.9384;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77534692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2935;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 77534786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0112;AVGPOST=0.9962;RSQ=0.8676;ERATE=0.0004;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77534788 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0387;AVGPOST=0.9993;RSQ=0.9927;ERATE=0.0003;THETA=0.0006;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 77534866 . C CT 26 PASS INDEL;BAVGPOST=0.998;BRSQ=0.541;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4040;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77534975 . T TA 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.3754;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77534981 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7577;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77535213 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6553;ERATE=0.0012;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77535218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5692;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77535248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7374;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77535295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5205;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77535433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4084;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0005;THETA=0.0007;AC=892;AN=2184 GT:DS:GL:BD 0.40842491 0
1 77535450 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0197;AVGPOST=0.9988;RSQ=0.9732;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77535524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5375;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77535632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5746;ERATE=0.0003;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77535724 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8567;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77535742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77535907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4631;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77536091 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4866;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77536227 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6448;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77536287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5248;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77536331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8211;ERATE=0.0005;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77536394 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77536435 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.856;LDAF=0.3564;AVGPOST=0.9092;RSQ=0.8630;ERATE=0.0102;THETA=0.0009;AC=792;AN=2184 GT:DS:GL:BD 0.36263737 0
1 77536442 . CAT C 10998 PASS INDEL;BAVGPOST=0.725;BRSQ=0.516;LDAF=0.6332;AVGPOST=0.8222;RSQ=0.7126;ERATE=0.0015;THETA=0.0004;AC=1412;AN=2184 GT:DS:GL:BD 0.64652014 1
1 77536456 . TA T 293 PASS INDEL;BAVGPOST=0.934;BRSQ=0.531;LDAF=0.1064;AVGPOST=0.8732;RSQ=0.4686;ERATE=0.0098;THETA=0.0005;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 77536457 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.568;LDAF=0.1008;AVGPOST=0.8973;RSQ=0.5520;ERATE=0.0070;THETA=0.0005;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 77536458 rs71075725 TA T 12076 PASS INDEL;BAVGPOST=0.725;BRSQ=0.514;LDAF=0.6394;AVGPOST=0.8313;RSQ=0.7227;ERATE=0.0013;THETA=0.0003;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 77536460 rs57742240;rs57838623 T TATATA 2300 PASS INDEL;BAVGPOST=0.802;BRSQ=0.530;LDAF=0.2612;AVGPOST=0.8773;RSQ=0.7644;ERATE=0.0025;THETA=0.0006;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 77536536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.632;LDAF=0.0058;AVGPOST=0.9951;RSQ=0.6343;ERATE=0.0010;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77537079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0533;AVGPOST=0.9987;RSQ=0.9902;ERATE=0.0003;THETA=0.0006;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 77537347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5953;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77537480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9986;RSQ=0.9266;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77537517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1886;AVGPOST=0.9969;RSQ=0.9921;ERATE=0.0005;THETA=0.0005;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 77537770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0087;AVGPOST=0.9951;RSQ=0.8037;ERATE=0.0005;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77537785 . GTC G 233 PASS INDEL;BAVGPOST=0.987;BRSQ=0.606;LDAF=0.0248;AVGPOST=0.9728;RSQ=0.5555;ERATE=0.0076;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77537843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7878;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77537862 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0145;AVGPOST=0.9978;RSQ=0.9451;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77537941 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77537942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7359;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77538402 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0090;AVGPOST=0.9957;RSQ=0.8231;ERATE=0.0007;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77538496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.870;BRSQ=0.373;LDAF=0.8702;AVGPOST=0.8394;RSQ=0.4457;ERATE=0.0140;THETA=0.0007;AC=2008;AN=2184 GT:DS:GL:BD 0.91941392 1
1 77538526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0172;AVGPOST=0.9935;RSQ=0.8512;ERATE=0.0007;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77538544 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.931;LDAF=0.0263;AVGPOST=0.9880;RSQ=0.8481;ERATE=0.0005;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 77538692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8772;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77538719 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5043;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77538866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77539038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0142;AVGPOST=0.9995;RSQ=0.9839;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77539044 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7691;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77539083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77539202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7623;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77539280 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5706;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77539392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9674;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77539393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9034;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77539415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77539423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9387;ERATE=0.0005;THETA=0.0001;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77539447 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0396;AVGPOST=0.9994;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 77539455 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7307;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77539578 . A AT 332 PASS INDEL;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9492;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77539709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8148;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77539818 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9726;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77539874 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0167;AVGPOST=0.9995;RSQ=0.9839;ERATE=0.0003;THETA=0.0008;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77539932 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.585;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4416;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77540171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.951;LDAF=0.0460;AVGPOST=0.9896;RSQ=0.9161;ERATE=0.0008;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 77540215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.663;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.7001;ERATE=0.0006;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77540364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9045;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77540397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4668;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77540579 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0098;AVGPOST=0.9993;RSQ=0.9652;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77540606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8021;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77540656 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.852;LDAF=0.0106;AVGPOST=0.9973;RSQ=0.9070;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77540661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3343;AVGPOST=0.9974;RSQ=0.9954;ERATE=0.0007;THETA=0.0003;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 77540671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6217;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77540694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77540860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9253;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77540959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77540993 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77541040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77541063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0081;AVGPOST=0.9990;RSQ=0.9520;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77541069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7343;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77541156 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.4136;AVGPOST=0.9962;RSQ=0.9940;ERATE=0.0004;THETA=0.0006;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 77541170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0088;AVGPOST=0.9981;RSQ=0.9210;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77541319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77541336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0029;AVGPOST=0.9965;RSQ=0.5909;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77541434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0145;AVGPOST=0.9963;RSQ=0.9137;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77541458 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77541521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1963;AVGPOST=0.9967;RSQ=0.9917;ERATE=0.0006;THETA=0.0008;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 77541537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0627;AVGPOST=0.9985;RSQ=0.9902;ERATE=0.0003;THETA=0.0009;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 77541590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9456;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77541749 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5558;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77541772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77541773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9901;ERATE=0.0003;THETA=0.0010;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77541863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4090;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0004;THETA=0.0012;AC=893;AN=2184 GT:DS:GL:BD 0.40888280 0
1 77541870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9765;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77541962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0200;AVGPOST=0.9990;RSQ=0.9796;ERATE=0.0004;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77541979 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77541986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.805;LDAF=0.0574;AVGPOST=0.9673;RSQ=0.7520;ERATE=0.0330;THETA=0.0011;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 77542384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2826;AVGPOST=0.9959;RSQ=0.9933;ERATE=0.0004;THETA=0.0010;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 77542395 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3169;AVGPOST=0.9966;RSQ=0.9944;ERATE=0.0003;THETA=0.0006;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 77542468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9106;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77542740 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77542860 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77542878 . T TA 648 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.9298;ERATE=0.0003;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77542949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77543116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8719;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77543329 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77543348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0704;AVGPOST=0.9980;RSQ=0.9892;ERATE=0.0004;THETA=0.0007;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 77543428 . G GGT 68 PASS INDEL;BAVGPOST=0.998;BRSQ=0.832;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8471;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77543478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0531;AVGPOST=0.9989;RSQ=0.9929;ERATE=0.0003;THETA=0.0006;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 77543555 . CACAG C 2835 PASS INDEL;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0135;AVGPOST=0.9985;RSQ=0.9534;ERATE=0.0004;THETA=0.0014;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77543689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77543788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0615;AVGPOST=0.9973;RSQ=0.9828;ERATE=0.0003;THETA=0.0007;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 77543953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1595;AVGPOST=0.9968;RSQ=0.9911;ERATE=0.0003;THETA=0.0010;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 77543988 . GT G 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6131;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77544046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77544162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6680;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77544186 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77544483 . T TG 610 PASS INDEL;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9231;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77544611 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0096;AVGPOST=0.9980;RSQ=0.9143;ERATE=0.0003;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77544616 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7887;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77544657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77544742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7645;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77544743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0092;AVGPOST=0.9990;RSQ=0.9549;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77544755 . ACAT A 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77544829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9465;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77544963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77544973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9592;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77545211 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6710;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77545267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7973;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77545340 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6408;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77545538 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9728;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77545588 . CT C 4104 PASS INDEL;BAVGPOST=0.996;BRSQ=0.939;LDAF=0.0321;AVGPOST=0.9954;RSQ=0.9444;ERATE=0.0005;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 77545745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77545768 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8537;ERATE=0.0003;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77545845 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3614;AVGPOST=0.9967;RSQ=0.9948;ERATE=0.0005;THETA=0.0005;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 77545854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9806;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77545913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77545914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0166;AVGPOST=0.9996;RSQ=0.9893;ERATE=0.0003;THETA=0.0013;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77545974 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7913;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77546084 . T TC 205 PASS INDEL;BAVGPOST=0.997;BRSQ=0.735;LDAF=0.0070;AVGPOST=0.9935;RSQ=0.6245;ERATE=0.0009;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77546085 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77546090 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8435;ERATE=0.0008;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77546091 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2851;AVGPOST=0.9955;RSQ=0.9929;ERATE=0.0003;THETA=0.0021;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 77546162 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5628;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77546235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0699;AVGPOST=0.9985;RSQ=0.9915;ERATE=0.0004;THETA=0.0026;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 77546254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77546501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7947;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77546546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6013;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77546554 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9316;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77546575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9634;ERATE=0.0003;THETA=0.0038;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77546768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4548;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77546779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.994;LDAF=0.3568;AVGPOST=0.9917;RSQ=0.9870;ERATE=0.0005;THETA=0.0096;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 77546883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9448;ERATE=0.0003;THETA=0.0054;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77547038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0057;AVGPOST=0.9974;RSQ=0.8195;ERATE=0.0005;THETA=0.0032;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77547106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.952;LDAF=0.2022;AVGPOST=0.9719;RSQ=0.9381;ERATE=0.0006;THETA=0.0145;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 77547124 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.967;LDAF=0.0626;AVGPOST=0.9898;RSQ=0.9325;ERATE=0.0006;THETA=0.0277;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 77547220 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0215;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77547233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.789;LDAF=0.0140;AVGPOST=0.9938;RSQ=0.8199;ERATE=0.0004;THETA=0.0166;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77547271 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0084;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77547425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0185;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77547442 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6920;ERATE=0.0004;THETA=0.0136;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77547518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5611;ERATE=0.0003;THETA=0.0279;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77547527 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0089;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77547557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0233;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77547689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6326;ERATE=0.0003;THETA=0.0258;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77547692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0219;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77547764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0185;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77547831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.888;LDAF=0.4429;AVGPOST=0.9316;RSQ=0.9028;ERATE=0.0271;THETA=0.0293;AC=957;AN=2184 GT:DS:GL:BD 0.43818682 0
1 77547909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0100;AVGPOST=0.9978;RSQ=0.9103;ERATE=0.0004;THETA=0.0561;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77548011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7966;ERATE=0.0005;THETA=0.0281;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77548108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8161;ERATE=0.0003;THETA=0.0287;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77548137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7606;ERATE=0.0004;THETA=0.0334;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77548142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.826;LDAF=0.0264;AVGPOST=0.9888;RSQ=0.8278;ERATE=0.0043;THETA=0.0155;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 77548189 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.533;LDAF=0.0105;AVGPOST=0.9883;RSQ=0.5780;ERATE=0.0039;THETA=0.0134;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77548265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4989;ERATE=0.0004;THETA=0.0321;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77548360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0003;THETA=0.0249;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77548370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0206;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77548382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0185;AVGPOST=0.9947;RSQ=0.8906;ERATE=0.0008;THETA=0.0191;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77548386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.855;LDAF=0.6316;AVGPOST=0.9124;RSQ=0.8708;ERATE=0.0114;THETA=0.0043;AC=1387;AN=2184 GT:DS:GL:BD 0.63507324 1
1 77548411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0004;THETA=0.0171;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77548427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7201;ERATE=0.0005;THETA=0.0220;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77548467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0278;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77548504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.8607;ERATE=0.0005;THETA=0.0131;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77548518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.918;BRSQ=0.872;LDAF=0.6335;AVGPOST=0.9230;RSQ=0.8971;ERATE=0.0061;THETA=0.0095;AC=1396;AN=2184 GT:DS:GL:BD 0.63919413 1
1 77548519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.433;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4595;ERATE=0.0003;THETA=0.0263;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77548531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0004;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77548600 . GA G 247 PASS INDEL;BAVGPOST=0.998;BRSQ=0.861;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8756;ERATE=0.0003;THETA=0.0073;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77548604 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7055;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77548650 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.6082;ERATE=0.0003;THETA=0.0112;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77548834 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.967;LDAF=0.1010;AVGPOST=0.9905;RSQ=0.9654;ERATE=0.0003;THETA=0.0008;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 77548843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.947;LDAF=0.1155;AVGPOST=0.9880;RSQ=0.9597;ERATE=0.0003;THETA=0.0013;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 77548873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0128;AVGPOST=0.9980;RSQ=0.9402;ERATE=0.0003;THETA=0.0058;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77548874 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0090;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77548909 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0156;AVGPOST=0.9988;RSQ=0.9677;ERATE=0.0003;THETA=0.0060;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77548918 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0062;AVGPOST=0.9992;RSQ=0.9419;ERATE=0.0003;THETA=0.0033;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77548934 . GCCA G 1064 PASS INDEL;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0078;AVGPOST=0.9976;RSQ=0.8805;ERATE=0.0003;THETA=0.0130;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77548951 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0122;AVGPOST=0.9993;RSQ=0.9753;ERATE=0.0003;THETA=0.0077;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77548968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4922;ERATE=0.0004;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77548975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6841;ERATE=0.0005;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77549051 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0059;AVGPOST=0.9986;RSQ=0.8988;ERATE=0.0004;THETA=0.0085;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77549057 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9314;ERATE=0.0004;THETA=0.0073;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77549090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6583;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77549114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9901;ERATE=0.0003;THETA=0.0016;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77549367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9395;ERATE=0.0003;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77549372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77549483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9359;ERATE=0.0003;THETA=0.0023;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77549863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8084;ERATE=0.0003;THETA=0.0057;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77549883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0073;AVGPOST=0.9972;RSQ=0.8503;ERATE=0.0003;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77549934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8603;ERATE=0.0004;THETA=0.0061;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77549940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77550164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8622;ERATE=0.0003;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77550273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1071;AVGPOST=0.9978;RSQ=0.9913;ERATE=0.0003;THETA=0.0036;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 77550360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7700;ERATE=0.0005;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77550431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6679;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0003;THETA=0.0017;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 77550438 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.783;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8631;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77550507 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6673;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0003;THETA=0.0010;AC=1459;AN=2184 GT:DS:GL:BD 0.66804028 1
1 77550946 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1004;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0003;THETA=0.0025;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 77551052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0170;AVGPOST=0.9983;RSQ=0.9603;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77551090 . A AT 18707 PASS INDEL;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.1632;AVGPOST=0.9912;RSQ=0.9789;ERATE=0.0006;THETA=0.0002;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 77551270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5817;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77551289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9470;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77551537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2069;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 77551693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77551699 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77551780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77551908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9050;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77552240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77552261 . A AT 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4088;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77552509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0038;AVGPOST=0.9965;RSQ=0.6491;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77552582 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77552626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77552639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2666;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0003;THETA=0.0002;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 77552685 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0367;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 77552753 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6021;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77552809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0327;AVGPOST=0.9994;RSQ=0.9924;ERATE=0.0003;THETA=0.0009;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 77552841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77552856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77552983 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77553038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9724;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77553041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0637;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77553117 . CA C 2216 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0183;AVGPOST=0.9989;RSQ=0.9739;ERATE=0.0005;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77553124 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0147;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77553138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4808;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77553177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7748;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77553251 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6371;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77553271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8903;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77553345 . TAAAG T 1081 PASS INDEL;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0082;AVGPOST=0.9983;RSQ=0.9174;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77553355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7867;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77553449 . CAG C 2819 PASS INDEL;BAVGPOST=0.992;BRSQ=0.872;LDAF=0.0298;AVGPOST=0.9836;RSQ=0.7928;ERATE=0.0038;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 77553458 . AG A 1520 PASS INDEL;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0179;AVGPOST=0.9988;RSQ=0.9675;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77553460 . AG A 1516 PASS INDEL;BAVGPOST=0.997;BRSQ=0.949;LDAF=0.0179;AVGPOST=0.9989;RSQ=0.9685;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77553461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2690;AVGPOST=0.9980;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 77553487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8718;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77553724 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1069;AVGPOST=0.9988;RSQ=0.9947;ERATE=0.0004;THETA=0.0001;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 77553782 . AAAG A 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77554093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5592;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77554131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.880;LDAF=0.0396;AVGPOST=0.9899;RSQ=0.8913;ERATE=0.0014;THETA=0.0009;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 77554132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.821;LDAF=0.0455;AVGPOST=0.9876;RSQ=0.8856;ERATE=0.0009;THETA=0.0002;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 77554206 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8493;ERATE=0.0006;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77554403 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5520;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77554442 . AC A 27 PASS INDEL;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0032;AVGPOST=0.9960;RSQ=0.5457;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77554453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.969;LDAF=0.2531;AVGPOST=0.9672;RSQ=0.9373;ERATE=0.0104;THETA=0.0008;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 77554542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4772;AVGPOST=0.9988;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 77554549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4966;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77554641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0637;AVGPOST=0.9992;RSQ=0.9943;ERATE=0.0004;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77554647 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9376;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77554775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0642;AVGPOST=0.9985;RSQ=0.9898;ERATE=0.0005;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77554810 . G GA 83 PASS INDEL;BAVGPOST=0.987;BRSQ=0.508;LDAF=0.0245;AVGPOST=0.9666;RSQ=0.4555;ERATE=0.0079;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77555058 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7132;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77555142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77555374 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77555411 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77555481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6677;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0003;THETA=0.0002;AC=1459;AN=2184 GT:DS:GL:BD 0.66804028 1
1 77555537 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77555675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5743;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77555737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2372;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 77555743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6697;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77555928 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77556018 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4788;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77556019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9251;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77556083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0117;AVGPOST=0.9957;RSQ=0.8599;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77556307 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77556341 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6657;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77556583 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77556636 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77556763 . AT A 1112 PASS INDEL;BAVGPOST=0.945;BRSQ=0.587;LDAF=0.0709;AVGPOST=0.9428;RSQ=0.7119;ERATE=0.0013;THETA=0.0006;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 77556766 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.975;LDAF=0.1634;AVGPOST=0.9925;RSQ=0.9797;ERATE=0.0009;THETA=0.0007;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 77556767 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1397;AVGPOST=0.9976;RSQ=0.9926;ERATE=0.0005;THETA=0.0004;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 77556851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6392;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77557005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6279;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77557241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8846;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77557298 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77557339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.906;LDAF=0.0625;AVGPOST=0.9930;RSQ=0.9525;ERATE=0.0005;THETA=0.0004;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 77557485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6231;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77557583 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9614;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77557629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.9086;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77557636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6122;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77557671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6597;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77557866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9414;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77557891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0190;AVGPOST=0.9995;RSQ=0.9902;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77558057 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3515;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0004;THETA=0.0002;AC=768;AN=2184 GT:DS:GL:BD 0.35164836 0
1 77558234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77558358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1350;AVGPOST=0.9984;RSQ=0.9946;ERATE=0.0005;THETA=0.0003;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 77558424 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9999;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77558556 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7931;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77558622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7890;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77558713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7641;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77558842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0636;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77558865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77558905 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77558938 . A AT 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5532;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77559086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6540;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77559136 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8545;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77559163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5338;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77559236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5241;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77559249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77559325 . C CA 726 PASS INDEL;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0055;AVGPOST=0.9965;RSQ=0.7468;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77559413 . T TC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5430;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77559534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4919;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77559642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4727;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77559703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8541;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77559718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77559756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.7698;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77559806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0160;AVGPOST=0.9986;RSQ=0.9711;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77559845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77559860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.915;LDAF=0.9849;AVGPOST=0.9972;RSQ=0.9354;ERATE=0.0004;THETA=0.0003;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 77560060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0637;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77560200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1075;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 77560216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4780;AVGPOST=0.9981;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 77560392 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77560463 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0279;AVGPOST=0.9981;RSQ=0.9761;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 77560532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9677;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77560705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77560811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77560932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0179;AVGPOST=0.9989;RSQ=0.9792;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77560969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8862;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77561087 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77561369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77561575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6072;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77561696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77561769 rs68002709 TAAAG T 26313 PASS INDEL;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.2362;AVGPOST=0.9978;RSQ=0.9946;ERATE=0.0004;THETA=0.0004;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 77561783 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6568;AVGPOST=0.9979;RSQ=0.9957;ERATE=0.0005;THETA=0.0004;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 77561950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77562103 . TG T 776 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77562166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77562184 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1075;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 77562243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77562292 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8657;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77562557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0094;AVGPOST=0.9969;RSQ=0.8611;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77562574 . T TG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.653;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5135;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77562625 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.521;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4802;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77562656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.708;LDAF=0.0073;AVGPOST=0.9938;RSQ=0.6676;ERATE=0.0018;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77562668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.755;LDAF=0.0079;AVGPOST=0.9918;RSQ=0.6021;ERATE=0.0026;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77562690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.5189;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77562698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0108;AVGPOST=0.9967;RSQ=0.8901;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77562806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9454;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77562861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2792;AVGPOST=0.9985;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 77563099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7775;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77563106 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3727;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77563268 . TC T 20575 PASS INDEL;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1608;AVGPOST=0.9977;RSQ=0.9935;ERATE=0.0003;THETA=0.0003;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 77563274 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77563350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7350;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77563417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77563468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77563488 . T TA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5172;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77563623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8954;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77563681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7298;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77563688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77563728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.7911;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77563729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8707;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77563775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5198;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77563820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0069;AVGPOST=0.9963;RSQ=0.8101;ERATE=0.0005;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77563871 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77563917 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8802;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77563929 . G GA 55 PASS INDEL;BAVGPOST=0.996;BRSQ=0.525;LDAF=0.0070;AVGPOST=0.9899;RSQ=0.4258;ERATE=0.0031;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77563950 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9603;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77563988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4781;AVGPOST=0.9958;RSQ=0.9942;ERATE=0.0005;THETA=0.0002;AC=1047;AN=2184 GT:DS:GL:BD 0.47939560 0
1 77564001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0330;AVGPOST=0.9988;RSQ=0.9871;ERATE=0.0003;THETA=0.0008;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 77564209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6783;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77564472 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77564556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5309;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77564590 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0189;AVGPOST=0.9986;RSQ=0.9697;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77564636 . C CT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4147;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77564646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7959;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77564686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6577;AVGPOST=0.9968;RSQ=0.9939;ERATE=0.0006;THETA=0.0001;AC=1438;AN=2184 GT:DS:GL:BD 0.65842491 1
1 77564707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2368;AVGPOST=0.9978;RSQ=0.9947;ERATE=0.0007;THETA=0.0003;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 77564719 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.637;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.6174;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77564768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0054;AVGPOST=0.9971;RSQ=0.8077;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77564855 . AAAT A 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0039;AVGPOST=0.9963;RSQ=0.6308;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77564973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6213;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77565156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77565348 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5205;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77565386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0082;AVGPOST=0.9988;RSQ=0.9492;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77565415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4779;AVGPOST=0.9991;RSQ=0.9986;ERATE=0.0003;THETA=0.0008;AC=1045;AN=2184 GT:DS:GL:BD 0.47847986 0
1 77565461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0637;AVGPOST=0.9993;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77565540 . CCT C 9823 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2372;AVGPOST=0.9980;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 77565573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.949;LDAF=0.0345;AVGPOST=0.9966;RSQ=0.9657;ERATE=0.0003;THETA=0.0001;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 77565660 rs11314658 CT C 16446 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2089;AVGPOST=0.9960;RSQ=0.9902;ERATE=0.0007;THETA=0.0003;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 77565662 . TA T 519 PASS INDEL;BAVGPOST=0.912;BRSQ=0.725;LDAF=0.1645;AVGPOST=0.8956;RSQ=0.7313;ERATE=0.0056;THETA=0.0003;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 77565711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77565818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6659;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77565864 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7225;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77566089 . AT A 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77566103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2101;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0008;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 77566111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9810;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77566199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9540;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77566301 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77566336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0327;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 77566386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5246;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77566427 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77566478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77566773 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2474;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 77566850 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9059;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77566911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0140;AVGPOST=0.9980;RSQ=0.9441;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77567040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9998;AVGPOST=0.9996;RSQ=0.0496;ERATE=0.0004;THETA=0.0004;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 77567042 . TACCC T 7159 PASS INDEL;BAVGPOST=0.996;BRSQ=0.943;LDAF=0.0373;AVGPOST=0.9974;RSQ=0.9739;ERATE=0.0005;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 77567078 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9457;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77567088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0053;AVGPOST=0.9987;RSQ=0.9086;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77567176 . CA C 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4415;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77567250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6819;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77567275 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9360;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77567277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9536;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77567463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9690;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77567589 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.925;LDAF=0.1079;AVGPOST=0.9974;RSQ=0.9887;ERATE=0.0004;THETA=0.0004;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 77567677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.7082;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77567695 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.803;LDAF=0.0063;AVGPOST=0.9984;RSQ=0.8998;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77567720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7710;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77567761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77567780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9576;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77567862 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5972;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77568083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7857;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77568162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77568167 . TA T 346 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.9154;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77568291 . CT C 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6107;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77568425 . ACAG A 387 PASS INDEL;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8443;ERATE=0.0004;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77568527 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77568881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0636;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77568906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0195;AVGPOST=0.9984;RSQ=0.9660;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77569022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0205;AVGPOST=0.9964;RSQ=0.9417;ERATE=0.0004;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77569023 . T TC 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77569112 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0303;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 77569142 . T TTAA 239 PASS INDEL;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7356;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77569211 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0039;AVGPOST=0.9993;RSQ=0.9331;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77569260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77569403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5641;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77569489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4788;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=1047;AN=2184 GT:DS:GL:BD 0.47939560 0
1 77569514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0302;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 77569545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1612;AVGPOST=0.9982;RSQ=0.9948;ERATE=0.0005;THETA=0.0005;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 77569547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6885;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77569599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8202;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77569982 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9217;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77570034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0642;AVGPOST=0.9987;RSQ=0.9908;ERATE=0.0003;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77570044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7504;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77570069 . CAT C 46 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77570293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0634;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77570294 . TAA T 58 PASS INDEL;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0053;AVGPOST=0.9968;RSQ=0.7775;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77570300 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0639;AVGPOST=0.9992;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77570359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77570360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4467;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77570361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0302;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 77570386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2372;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 77570446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9595;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77570589 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0161;AVGPOST=0.9942;RSQ=0.8720;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77570620 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7807;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77570633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9998;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77570705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0165;AVGPOST=0.9994;RSQ=0.9823;ERATE=0.0004;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77570772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2103;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0004;THETA=0.0003;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 77570905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77571069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0307;AVGPOST=0.9984;RSQ=0.9793;ERATE=0.0004;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 77571165 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6027;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77571224 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77571258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6330;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77571274 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1092;AVGPOST=0.9979;RSQ=0.9924;ERATE=0.0005;THETA=0.0010;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 77571446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0031;AVGPOST=0.9972;RSQ=0.6434;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77571449 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7722;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77571474 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77571509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4677;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77571653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0036;AVGPOST=0.9973;RSQ=0.6905;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77571753 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0002;AVGPOST=0.9995;RSQ=0.3297;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77571784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8426;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77571794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8008;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77571820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1080;AVGPOST=0.9987;RSQ=0.9944;ERATE=0.0004;THETA=0.0002;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77572054 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6178;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77572058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77572062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4435;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77572120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6670;AVGPOST=0.9967;RSQ=0.9939;ERATE=0.0005;THETA=0.0005;AC=1459;AN=2184 GT:DS:GL:BD 0.66804028 1
1 77572126 . TAAAC T 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5647;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77572137 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5189;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77572211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7867;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77572381 . CTAA C 183 PASS INDEL;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3746;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77572471 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77572559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8338;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77572689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.2282;AVGPOST=0.9904;RSQ=0.9785;ERATE=0.0011;THETA=0.0005;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 77572701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7269;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77572724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.1079;AVGPOST=0.9980;RSQ=0.9917;ERATE=0.0004;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 77572737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77572792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.522;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3355;ERATE=0.0008;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77572943 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0038;AVGPOST=0.9959;RSQ=0.6092;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77573118 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.882;LDAF=0.0882;AVGPOST=0.9888;RSQ=0.9554;ERATE=0.0003;THETA=0.0005;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 77573173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9044;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77573420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1111;AVGPOST=0.9955;RSQ=0.9819;ERATE=0.0007;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 77573529 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77573670 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5754;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77573715 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0088;AVGPOST=0.9978;RSQ=0.8900;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77573842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77573901 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9980;RSQ=0.8318;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77573928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77574000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4304;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77574017 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4390;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77574086 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8565;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77574181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.833;LDAF=0.2204;AVGPOST=0.9606;RSQ=0.9160;ERATE=0.0016;THETA=0.0004;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 77574210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.628;LDAF=0.0141;AVGPOST=0.9872;RSQ=0.6486;ERATE=0.0008;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77574241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.312;LDAF=0.0261;AVGPOST=0.9762;RSQ=0.6546;ERATE=0.0031;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77574241 . TA T 375 PASS INDEL;BAVGPOST=0.911;BRSQ=0.271;LDAF=0.0886;AVGPOST=0.9022;RSQ=0.5514;ERATE=0.0089;THETA=0.0004;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 77574278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.555;LDAF=0.0176;AVGPOST=0.9791;RSQ=0.5420;ERATE=0.0035;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77574358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1613;AVGPOST=0.9988;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 77574421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6344;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77574444 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9980;RSQ=0.8854;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77574509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4912;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77574751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.913;LDAF=0.0271;AVGPOST=0.9952;RSQ=0.9302;ERATE=0.0003;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 77574774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0638;AVGPOST=0.9992;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77574872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6340;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77574997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1613;AVGPOST=0.9981;RSQ=0.9945;ERATE=0.0005;THETA=0.0005;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 77575115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6805;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77575158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8576;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77575225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9099;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77575226 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0113;AVGPOST=0.9985;RSQ=0.9447;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77575537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.860;LDAF=0.0563;AVGPOST=0.9915;RSQ=0.9361;ERATE=0.0009;THETA=0.0003;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 77575626 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0208;AVGPOST=0.9995;RSQ=0.9907;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77575730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.855;BRSQ=0.764;LDAF=0.4018;AVGPOST=0.8807;RSQ=0.8437;ERATE=0.0077;THETA=0.0003;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 77575833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.905;LDAF=0.0143;AVGPOST=0.9968;RSQ=0.9174;ERATE=0.0005;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77575851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5912;ERATE=0.0006;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77575883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77575907 . G GC 42 PASS INDEL;BAVGPOST=0.996;BRSQ=0.610;LDAF=0.0075;AVGPOST=0.9906;RSQ=0.5007;ERATE=0.0019;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77576036 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1667;AVGPOST=0.9876;RSQ=0.9696;ERATE=0.0008;THETA=0.0002;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 77576188 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.910;BRSQ=0.807;LDAF=0.2912;AVGPOST=0.9117;RSQ=0.8564;ERATE=0.0126;THETA=0.0004;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 77576200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0031;AVGPOST=0.9955;RSQ=0.4004;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77576211 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1631;AVGPOST=0.9951;RSQ=0.9864;ERATE=0.0010;THETA=0.0002;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 77576217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0524;AVGPOST=0.9948;RSQ=0.9596;ERATE=0.0005;THETA=0.0002;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 77576343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6318;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77576397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.813;LDAF=0.1890;AVGPOST=0.9748;RSQ=0.9422;ERATE=0.0012;THETA=0.0003;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 77576431 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.862;LDAF=0.0194;AVGPOST=0.9920;RSQ=0.8590;ERATE=0.0008;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77576644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0672;AVGPOST=0.9950;RSQ=0.9692;ERATE=0.0005;THETA=0.0018;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 77576940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0297;AVGPOST=0.9983;RSQ=0.9818;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 77577003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0653;AVGPOST=0.9977;RSQ=0.9866;ERATE=0.0003;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 77577219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1027;AVGPOST=0.9933;RSQ=0.9711;ERATE=0.0007;THETA=0.0003;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 77577231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.767;LDAF=0.0146;AVGPOST=0.9934;RSQ=0.8142;ERATE=0.0010;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77577298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8449;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77577341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.804;LDAF=0.0126;AVGPOST=0.9943;RSQ=0.8346;ERATE=0.0005;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77577382 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77577392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.656;LDAF=0.0079;AVGPOST=0.9952;RSQ=0.8058;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77577411 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.645;LDAF=0.0045;AVGPOST=0.9963;RSQ=0.6653;ERATE=0.0007;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77577607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6225;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77577639 . CA C 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.5970;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77577670 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1616;AVGPOST=0.9968;RSQ=0.9919;ERATE=0.0005;THETA=0.0005;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 77577791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77577891 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77578101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6685;AVGPOST=0.9973;RSQ=0.9949;ERATE=0.0005;THETA=0.0003;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 77578103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.790;LDAF=0.0054;AVGPOST=0.9978;RSQ=0.8218;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77578283 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7085;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77578394 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0084;AVGPOST=0.9978;RSQ=0.8926;ERATE=0.0005;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77578612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0066;AVGPOST=0.9967;RSQ=0.7859;ERATE=0.0005;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77578824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0023;AVGPOST=0.9966;RSQ=0.4565;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77579043 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2372;AVGPOST=0.9984;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 77579144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1002;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 77579402 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77579526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9841;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77579658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5678;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77579666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8786;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77579717 . A ATT 401 PASS INDEL;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7643;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77579790 . G GT 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6080;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77579836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0153;AVGPOST=0.9992;RSQ=0.9802;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77579946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1091;AVGPOST=0.9988;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 77580064 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6875;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77580192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1104;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 77580257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1096;AVGPOST=0.9989;RSQ=0.9947;ERATE=0.0005;THETA=0.0005;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 77580265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6089;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77580424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5426;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77580441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0639;AVGPOST=0.9991;RSQ=0.9934;ERATE=0.0003;THETA=0.0001;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77580462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77580648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0091;AVGPOST=0.9997;RSQ=0.9862;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77580669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6256;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77580696 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2090;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 77580826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77580864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77580874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9725;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77580933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77581148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7944;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77581246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.8020;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77581250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9260;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77581283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0639;AVGPOST=0.9992;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77581302 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77581375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77581489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6065;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77581634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5905;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77581664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8726;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77581766 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9366;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77581815 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77581958 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77581970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0100;AVGPOST=0.9959;RSQ=0.8416;ERATE=0.0005;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77582029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0056;AVGPOST=0.9961;RSQ=0.6819;ERATE=0.0011;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77582046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.931;LDAF=0.0526;AVGPOST=0.9926;RSQ=0.9407;ERATE=0.0008;THETA=0.0007;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 77582056 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0375;AVGPOST=0.9979;RSQ=0.9731;ERATE=0.0006;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 77582098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7254;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77582131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.955;LDAF=0.0636;AVGPOST=0.9947;RSQ=0.9650;ERATE=0.0006;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77582170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5248;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77582284 rs71592400 CGT C 463 PASS INDEL;BAVGPOST=0.860;BRSQ=0.385;LDAF=0.1625;AVGPOST=0.8332;RSQ=0.5173;ERATE=0.0201;THETA=0.0003;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 77582300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77582341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6684;AVGPOST=0.9970;RSQ=0.9947;ERATE=0.0005;THETA=0.0003;AC=1459;AN=2184 GT:DS:GL:BD 0.66804028 1
1 77582366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5958;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77582469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6200;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77582680 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0064;AVGPOST=0.9988;RSQ=0.9377;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77582863 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77582873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77582942 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77583001 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77583016 rs59911395 AT A 825 PASS INDEL;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0066;AVGPOST=0.9985;RSQ=0.9004;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77583096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0301;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 77583311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77583331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9034;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77583402 . TTG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5911;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77583455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0154;AVGPOST=0.9992;RSQ=0.9796;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77583513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9865;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77583610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77583802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.5055;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77583916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6776;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77583923 . T TTTTC 140 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5819;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77583984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0045;AVGPOST=0.9976;RSQ=0.7815;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77583996 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7172;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77584071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0628;AVGPOST=0.9980;RSQ=0.9874;ERATE=0.0005;THETA=0.0003;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 77584073 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0327;AVGPOST=0.9995;RSQ=0.9943;ERATE=0.0003;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 77584163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0003;AVGPOST=0.9996;RSQ=0.5697;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77584197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77584246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9372;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77584365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0109;AVGPOST=0.9959;RSQ=0.8559;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77584366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8591;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77584406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77584430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9812;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77584466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8792;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77584626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77584631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7830;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77584737 . ATAT A 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7499;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77584738 . TATA T 277 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6577;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77584843 . T TC 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7441;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77584846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6680;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=1459;AN=2184 GT:DS:GL:BD 0.66804028 1
1 77584863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1002;AVGPOST=0.9994;RSQ=0.9969;ERATE=0.0004;THETA=0.0002;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 77584968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77584988 . A AT 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4264;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77585111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0371;AVGPOST=0.9989;RSQ=0.9875;ERATE=0.0004;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 77585175 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77585259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0096;AVGPOST=0.9988;RSQ=0.9452;ERATE=0.0003;THETA=0.0001;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77585297 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77585486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9247;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77585523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2673;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 77585612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0304;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 77585981 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6018;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77586029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5628;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77586190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1105;AVGPOST=0.9983;RSQ=0.9927;ERATE=0.0005;THETA=0.0003;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 77586212 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9802;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77586227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8182;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77586253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77586520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7265;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77586684 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.7285;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77586773 . AGAT A 156 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77586884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77586950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77587019 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6686;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=1461;AN=2184 GT:DS:GL:BD 0.66895604 1
1 77587212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9077;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77587219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0085;AVGPOST=0.9981;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77587262 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9980;RSQ=0.8538;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77587313 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4979;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77587464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7174;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77587475 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5163;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77587485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6772;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77587560 . AT A 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5459;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77587652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77587797 . T TG 670 PASS INDEL;BAVGPOST=0.997;BRSQ=0.799;LDAF=0.0070;AVGPOST=0.9967;RSQ=0.7894;ERATE=0.0007;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77587823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77587838 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77587996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77588015 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77588077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77588131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2475;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 77588144 . AG A 168 PASS INDEL;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.6163;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77588234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6288;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77588349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77588431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0144;AVGPOST=0.9986;RSQ=0.9629;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77588467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0151;AVGPOST=0.9988;RSQ=0.9651;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77588522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4052;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77588582 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.803;LDAF=0.9896;AVGPOST=0.9942;RSQ=0.7968;ERATE=0.0003;THETA=0.0003;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 77588626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9980;RSQ=0.3799;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77588661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0022;AVGPOST=0.9969;RSQ=0.5049;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77589089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4520;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77589117 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9341;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77589139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9072;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77589147 . GA G 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8250;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77589340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0636;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77589393 . T TG 108 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77589504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8017;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77589613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5179;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77589671 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0001;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77589724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1778;AVGPOST=0.9987;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 77589761 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77589771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77589834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77589996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0328;AVGPOST=0.9989;RSQ=0.9850;ERATE=0.0004;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 77590112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.4685;AVGPOST=0.9874;RSQ=0.9830;ERATE=0.0011;THETA=0.0003;AC=1030;AN=2184 GT:DS:GL:BD 0.47161171 0
1 77590114 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0046;AVGPOST=0.9957;RSQ=0.6427;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77590123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.4405;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77590302 . C CA 9212 PASS INDEL;BAVGPOST=0.878;BRSQ=0.639;LDAF=0.2362;AVGPOST=0.8346;RSQ=0.6498;ERATE=0.0426;THETA=0.0003;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 77590304 . AC A 17990 PASS INDEL;BAVGPOST=0.966;BRSQ=0.935;LDAF=0.6231;AVGPOST=0.9312;RSQ=0.8976;ERATE=0.0120;THETA=0.0005;AC=1393;AN=2184 GT:DS:GL:BD 0.63782054 1
1 77590315 . A AC 4155 PASS INDEL;BAVGPOST=0.973;BRSQ=0.712;LDAF=0.0527;AVGPOST=0.9707;RSQ=0.7831;ERATE=0.0039;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 77590326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6580;AVGPOST=0.9969;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=1438;AN=2184 GT:DS:GL:BD 0.65842491 1
1 77590360 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0391;AVGPOST=0.9982;RSQ=0.9793;ERATE=0.0004;THETA=0.0002;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 77590417 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0637;AVGPOST=0.9994;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77590510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1920;AVGPOST=0.9981;RSQ=0.9946;ERATE=0.0004;THETA=0.0004;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 77590535 . T TGA 2802 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0190;AVGPOST=0.9995;RSQ=0.9892;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77590559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9996;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77590565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0366;AVGPOST=0.9996;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 77590594 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.442;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5554;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77590642 . T TG 324 PASS INDEL;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0053;AVGPOST=0.9968;RSQ=0.7540;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77590742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8515;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77590847 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8360;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77590914 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77590961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4755;AVGPOST=0.9975;RSQ=0.9960;ERATE=0.0005;THETA=0.0004;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 77591040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6661;AVGPOST=0.9958;RSQ=0.9930;ERATE=0.0005;THETA=0.0005;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 77591190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0051;AVGPOST=0.9980;RSQ=0.8348;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77591360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6249;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77591376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.4219;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77591391 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4100;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77591531 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77591535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8348;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77591626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6525;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77591682 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6045;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77591713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77591842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8050;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77592049 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7993;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77592056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77592070 . AG A 6334 PASS INDEL;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0389;AVGPOST=0.9986;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 77592085 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0188;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77592196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77592306 . CATT C 207 PASS INDEL;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0032;AVGPOST=0.9964;RSQ=0.5414;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77592351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2384;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0007;THETA=0.0004;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 77592357 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9360;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77592466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0197;AVGPOST=0.9969;RSQ=0.9419;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77592579 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9583;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77592876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6548;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77592890 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5023;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77593056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9780;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77593086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0334;AVGPOST=0.9989;RSQ=0.9869;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 77593127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6743;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77593143 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0098;AVGPOST=0.9990;RSQ=0.9661;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77593195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6321;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77593303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77593345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77593372 . TAA T 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77593380 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1920;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0004;THETA=0.0002;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 77593388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7328;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77593636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6000;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77593672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0197;AVGPOST=0.9991;RSQ=0.9790;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77593780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.6675;AVGPOST=0.9974;RSQ=0.9949;ERATE=0.0006;THETA=0.0003;AC=1459;AN=2184 GT:DS:GL:BD 0.66804028 1
1 77593938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5149;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77593990 . CAAGTT C 734 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9789;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77594103 . TAAG T 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4446;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77594116 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1004;AVGPOST=0.9993;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 77594164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1082;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 77594181 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0098;AVGPOST=0.9992;RSQ=0.9660;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77594245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77594291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77594540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7585;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77594546 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77594548 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7455;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77594572 . GT G 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7608;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77594574 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2112;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 77594606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0613;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 77594643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77594657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2103;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 77594694 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77594742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6815;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77594766 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7796;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77595091 . CAG C 744 PASS INDEL;BAVGPOST=0.994;BRSQ=0.671;LDAF=0.0109;AVGPOST=0.9961;RSQ=0.8620;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77595155 . G GA 4451 PASS INDEL;BAVGPOST=0.977;BRSQ=0.927;LDAF=0.1024;AVGPOST=0.9823;RSQ=0.9329;ERATE=0.0007;THETA=0.0003;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 77595290 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0190;AVGPOST=0.9985;RSQ=0.9640;ERATE=0.0005;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77595608 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77595705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6106;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77595788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5957;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77595817 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9981;RSQ=0.8585;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77595892 . CTA C 930 PASS INDEL;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0207;AVGPOST=0.9949;RSQ=0.8945;ERATE=0.0009;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77595906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.737;LDAF=0.0215;AVGPOST=0.9904;RSQ=0.8249;ERATE=0.0014;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 77595946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4791;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0004;THETA=0.0006;AC=1047;AN=2184 GT:DS:GL:BD 0.47939560 0
1 77596156 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6656;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77596203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.1089;AVGPOST=0.9968;RSQ=0.9884;ERATE=0.0003;THETA=0.0004;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 77596204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77596216 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1610;AVGPOST=0.9988;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 77596243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0154;AVGPOST=0.9984;RSQ=0.9586;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77596301 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77596321 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77596450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.933;LDAF=0.0233;AVGPOST=0.9975;RSQ=0.9560;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 77596468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77596519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77596625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6037;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77596801 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0025;AVGPOST=0.9961;RSQ=0.5053;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77597170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0040;AVGPOST=0.9977;RSQ=0.7900;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77597173 . G GA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6070;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77597256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77597383 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7541;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77597388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2372;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0007;THETA=0.0004;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 77597507 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77597544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5313;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77597586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.5314;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77597633 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1083;AVGPOST=0.9989;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 77597658 . AAACCATCT A 475 PASS INDEL;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6852;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77597703 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77597795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0083;AVGPOST=0.9984;RSQ=0.9028;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77597797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2473;AVGPOST=0.9976;RSQ=0.9949;ERATE=0.0004;THETA=0.0006;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 77597802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77597969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8870;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77597986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.800;LDAF=0.0090;AVGPOST=0.9966;RSQ=0.8392;ERATE=0.0004;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77598050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77598093 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77598102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0313;AVGPOST=0.9981;RSQ=0.9734;ERATE=0.0003;THETA=0.0006;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 77598207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8479;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77598219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7892;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77598419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5855;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77598424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8640;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77598435 . TTC T 937 PASS INDEL;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0087;AVGPOST=0.9986;RSQ=0.9304;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77598437 . CTCTG C 602 PASS INDEL;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9063;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77598451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0051;AVGPOST=0.9987;RSQ=0.8841;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77598553 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9002;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77598557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7862;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77598640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8622;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77598730 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77598836 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77598863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.940;LDAF=0.9839;AVGPOST=0.9973;RSQ=0.9387;ERATE=0.0004;THETA=0.0003;AC=2149;AN=2184 GT:DS:GL:BD 0.98397434 1
1 77598869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77598871 . CTGTT C 389 PASS INDEL;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8977;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77598911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1099;AVGPOST=0.9981;RSQ=0.9930;ERATE=0.0003;THETA=0.0002;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 77598923 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8617;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77599131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6111;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77599275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77599330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77599417 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7808;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77599422 . G GC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4178;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77599450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7348;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77599490 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9725;ERATE=0.0003;THETA=0.0020;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77599580 . T TTGGC 1091 PASS INDEL;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0091;AVGPOST=0.9994;RSQ=0.9671;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77599585 . AT A 480 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9643;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77599597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4805;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77599648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9615;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77599801 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9842;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77599809 . CAAG C 1029 PASS INDEL;BAVGPOST=0.995;BRSQ=0.824;LDAF=0.0120;AVGPOST=0.9988;RSQ=0.9539;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77599878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77599895 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7364;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77600000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77600018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77600077 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7084;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77600150 . T TG 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6413;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77600190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0045;AVGPOST=0.9957;RSQ=0.6624;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77600258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7552;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77600379 rs78785949 C CT 20311 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2478;AVGPOST=0.9963;RSQ=0.9913;ERATE=0.0006;THETA=0.0005;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 77600579 . CAA C 193 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6779;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77600602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0327;AVGPOST=0.9971;RSQ=0.9701;ERATE=0.0003;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 77600690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2105;AVGPOST=0.9977;RSQ=0.9944;ERATE=0.0005;THETA=0.0006;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 77600695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.9276;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77600908 . TATC T 624 PASS INDEL;BAVGPOST=0.998;BRSQ=0.727;LDAF=0.0052;AVGPOST=0.9950;RSQ=0.6040;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77601060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.880;LDAF=0.0231;AVGPOST=0.9952;RSQ=0.9187;ERATE=0.0005;THETA=0.0006;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 77601160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5022;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77601161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77601175 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77601246 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77601327 . CATTG C 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77601329 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6182;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77601418 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.589;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.5141;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77601625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6348;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77601675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77601807 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7290;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77602011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.429;LDAF=0.0145;AVGPOST=0.9834;RSQ=0.5222;ERATE=0.0020;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77602085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.945;LDAF=0.1144;AVGPOST=0.9870;RSQ=0.9459;ERATE=0.0010;THETA=0.0004;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 77602127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.607;BRSQ=0.339;LDAF=0.4203;AVGPOST=0.7092;RSQ=0.5280;ERATE=0.0262;THETA=0.0004;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 77602667 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7966;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77602705 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1090;AVGPOST=0.9963;RSQ=0.9871;ERATE=0.0004;THETA=0.0005;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 77602748 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7673;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77602765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5410;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77602908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6264;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77602926 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0326;AVGPOST=0.9996;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 77602987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8675;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77603226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0999;AVGPOST=0.9973;RSQ=0.9898;ERATE=0.0003;THETA=0.0031;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 77603284 . G GAATTT 10049 PASS INDEL;BAVGPOST=0.992;BRSQ=0.950;LDAF=0.0641;AVGPOST=0.9987;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77603285 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.858;LDAF=0.0538;AVGPOST=0.9896;RSQ=0.9253;ERATE=0.0004;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 77603349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4944;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77603414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0213;AVGPOST=0.9976;RSQ=0.9561;ERATE=0.0004;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77603477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.977;LDAF=0.1090;AVGPOST=0.9946;RSQ=0.9790;ERATE=0.0007;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 77603492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6209;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77603495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1073;AVGPOST=0.9982;RSQ=0.9921;ERATE=0.0004;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 77603541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.932;LDAF=0.0277;AVGPOST=0.9966;RSQ=0.9504;ERATE=0.0003;THETA=0.0007;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77603752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6176;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77603808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6599;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77603836 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1002;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 77603965 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7239;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77603971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2375;AVGPOST=0.9969;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 77604019 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77604137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.8088;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77604169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0635;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77604242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8079;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77604265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7160;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77604431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9210;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77604438 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8872;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77604588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7374;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77604742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77604811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2367;AVGPOST=0.9982;RSQ=0.9959;ERATE=0.0005;THETA=0.0005;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 77604888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7576;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77604905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77605076 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77605193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4190;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77605223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9813;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77605261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0269;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0003;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 77605415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6569;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77605461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77605540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1063;AVGPOST=0.9993;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 77605553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6257;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77605578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77605673 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6835;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77605780 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77605871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77606092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77606112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7623;ERATE=0.0003;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77606130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7937;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77606265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5825;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77606274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77606280 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77606321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77606353 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6467;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77606408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0044;AVGPOST=0.9976;RSQ=0.7974;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77606497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77606613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0190;AVGPOST=0.9995;RSQ=0.9900;ERATE=0.0003;THETA=0.0013;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77606646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0038;AVGPOST=0.9984;RSQ=0.8308;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77606683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3663;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77606700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8247;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77606726 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0031;AVGPOST=0.9966;RSQ=0.5978;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77606774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1448;AVGPOST=0.9991;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 77606800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0030;AVGPOST=0.9966;RSQ=0.5665;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77606879 rs11290883 GC G 17653 PASS INDEL;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1468;AVGPOST=0.9953;RSQ=0.9853;ERATE=0.0010;THETA=0.0004;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 77606979 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6948;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77607032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77607082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0030;AVGPOST=0.9974;RSQ=0.7129;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77607101 . T TA 1393 PASS INDEL;BAVGPOST=0.994;BRSQ=0.813;LDAF=0.0138;AVGPOST=0.9967;RSQ=0.8961;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77607160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.977;LDAF=0.2247;AVGPOST=0.9948;RSQ=0.9889;ERATE=0.0009;THETA=0.0004;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 77607220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5687;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77607494 . AT A 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4228;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77607496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0190;AVGPOST=0.9967;RSQ=0.9356;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77607578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.8409;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77607721 . TA T 244 PASS INDEL;BAVGPOST=0.998;BRSQ=0.661;LDAF=0.0060;AVGPOST=0.9941;RSQ=0.6210;ERATE=0.0012;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77607842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8809;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77607995 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7986;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77608081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77608137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77608221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6169;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77608226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77608252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9764;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77608319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0074;AVGPOST=0.9986;RSQ=0.9162;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77608500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8410;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77608518 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0080;AVGPOST=0.9993;RSQ=0.9675;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77608541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8888;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77608544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1451;AVGPOST=0.9976;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 77608615 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7382;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77608665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77608669 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9206;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77608760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1619;AVGPOST=0.9985;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 77608769 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7537;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77608908 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4655;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77608928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9681;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77608943 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9485;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77608965 . TG T 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0033;AVGPOST=0.9963;RSQ=0.5133;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77608977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5720;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77609028 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4781;AVGPOST=0.9951;RSQ=0.9928;ERATE=0.0006;THETA=0.0005;AC=1045;AN=2184 GT:DS:GL:BD 0.47847986 0
1 77609083 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4864;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77609244 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.744;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.8052;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77609268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4856;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77609378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.732;LDAF=0.0040;AVGPOST=0.9977;RSQ=0.8117;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77609450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7425;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77609512 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77609740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0495;AVGPOST=0.9993;RSQ=0.9928;ERATE=0.0003;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 77609763 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77609778 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9382;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77610030 . ATAC A 1601 PASS INDEL;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0180;AVGPOST=0.9939;RSQ=0.8872;ERATE=0.0005;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77610045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6808;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77610315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5736;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77610342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0639;AVGPOST=0.9989;RSQ=0.9928;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77610456 . T TA 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4139;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77610484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0027;AVGPOST=0.9955;RSQ=0.3916;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77610619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2092;AVGPOST=0.9976;RSQ=0.9951;ERATE=0.0004;THETA=0.0003;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 77610680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.4794;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77610689 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6579;AVGPOST=0.9962;RSQ=0.9933;ERATE=0.0004;THETA=0.0005;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 77610789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1455;AVGPOST=0.9985;RSQ=0.9951;ERATE=0.0005;THETA=0.0003;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 77610817 . ACAAT A 392 PASS INDEL;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3800;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77610855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0197;AVGPOST=0.9980;RSQ=0.9612;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77611002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0647;AVGPOST=0.9979;RSQ=0.9868;ERATE=0.0004;THETA=0.0005;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 77611050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8458;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77611128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6076;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77611151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0182;AVGPOST=0.9981;RSQ=0.9659;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77611159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0091;AVGPOST=0.9997;RSQ=0.9857;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77611258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8006;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77611443 . G GA 15 PASS INDEL;BAVGPOST=0.987;BRSQ=0.499;LDAF=0.0379;AVGPOST=0.9473;RSQ=0.4364;ERATE=0.0098;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77611456 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0045;AVGPOST=0.9947;RSQ=0.5352;ERATE=0.0011;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77611728 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0045;AVGPOST=0.9985;RSQ=0.8688;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77611791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1950;AVGPOST=0.9967;RSQ=0.9910;ERATE=0.0005;THETA=0.0004;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 77611825 . G GA 15 PASS INDEL;BAVGPOST=0.991;BRSQ=0.566;LDAF=0.0241;AVGPOST=0.9725;RSQ=0.5559;ERATE=0.0044;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77611839 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0067;AVGPOST=0.9944;RSQ=0.7146;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77612138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9345;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77612189 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77612299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9270;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77612302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1450;AVGPOST=0.9961;RSQ=0.9885;ERATE=0.0005;THETA=0.0006;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 77612310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0042;AVGPOST=0.9959;RSQ=0.6177;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77612329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7618;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77612344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0034;AVGPOST=0.9960;RSQ=0.5789;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77612414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1493;AVGPOST=0.9946;RSQ=0.9856;ERATE=0.0007;THETA=0.0006;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 77612480 . TA T 122 PASS INDEL;BAVGPOST=0.953;BRSQ=0.398;LDAF=0.0769;AVGPOST=0.8968;RSQ=0.4369;ERATE=0.0141;THETA=0.0003;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 77612489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2398;AVGPOST=0.9961;RSQ=0.9910;ERATE=0.0007;THETA=0.0002;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 77612515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.892;LDAF=0.0234;AVGPOST=0.9949;RSQ=0.9215;ERATE=0.0004;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 77612711 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77612764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8893;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77613058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77613059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1067;AVGPOST=0.9993;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 77613061 . GA G 1465 PASS INDEL;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0148;AVGPOST=0.9977;RSQ=0.9495;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77613074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9530;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77613113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5730;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77613138 . T TA 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77613434 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5646;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77613455 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0190;AVGPOST=0.9995;RSQ=0.9889;ERATE=0.0003;THETA=0.0010;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77613713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.8776;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77613718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.4405;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77613744 . TCTAA T 407 PASS INDEL;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9109;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77613754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0267;AVGPOST=0.9995;RSQ=0.9908;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 77613756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5890;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77613950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0097;AVGPOST=0.9990;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77614045 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4045;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77614068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0204;AVGPOST=0.9979;RSQ=0.9569;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 77614119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.0549;ERATE=0.0005;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77614123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.694;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6311;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77614129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9553;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77614206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8633;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77614268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77614285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8251;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77614398 . GT G 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4229;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77614417 . T TTG 544 PASS INDEL;BAVGPOST=0.924;BRSQ=0.629;LDAF=0.1015;AVGPOST=0.9279;RSQ=0.7235;ERATE=0.0039;THETA=0.0005;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 77614424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.969;LDAF=0.1686;AVGPOST=0.9864;RSQ=0.9670;ERATE=0.0016;THETA=0.0005;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 77614425 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9141;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77614469 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6781;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77614535 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6242;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77614547 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1077;AVGPOST=0.9974;RSQ=0.9890;ERATE=0.0005;THETA=0.0006;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 77614691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0515;AVGPOST=0.9975;RSQ=0.9791;ERATE=0.0003;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 77614727 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9985;RSQ=0.9409;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77614733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5636;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77614745 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7777;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77614751 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0191;AVGPOST=0.9992;RSQ=0.9825;ERATE=0.0004;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77614778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1609;AVGPOST=0.9985;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 77614810 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4408;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77614942 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7291;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77615016 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5711;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77615031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9172;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77615036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77615057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7780;ERATE=0.0005;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77615149 . TA T 1827 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0189;AVGPOST=0.9995;RSQ=0.9878;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77615256 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0636;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77615401 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8581;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77615473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2392;AVGPOST=0.9979;RSQ=0.9950;ERATE=0.0006;THETA=0.0006;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 77615495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77615526 . TA T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8083;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77615528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8806;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77615581 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77615653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0029;AVGPOST=0.9967;RSQ=0.5595;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77615769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.6582;AVGPOST=0.9965;RSQ=0.9941;ERATE=0.0007;THETA=0.0005;AC=1438;AN=2184 GT:DS:GL:BD 0.65842491 1
1 77615806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6158;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77615867 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77615927 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5907;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77615928 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6012;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77615949 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1655;AVGPOST=0.9978;RSQ=0.9941;ERATE=0.0007;THETA=0.0002;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 77615956 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9990;RSQ=0.9304;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77615968 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2380;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 77615976 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5588;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77616120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4647;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77616137 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77616145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7046;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77616148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2309;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 77616185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4240;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77616284 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6753;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77616394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77616397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6803;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77616412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.910;LDAF=0.0196;AVGPOST=0.9964;RSQ=0.9318;ERATE=0.0003;THETA=0.0027;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77616469 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77616545 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77616681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8342;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77616701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0191;AVGPOST=0.9994;RSQ=0.9890;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77616824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1452;AVGPOST=0.9988;RSQ=0.9960;ERATE=0.0005;THETA=0.0006;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 77616826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77616933 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77616960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0223;AVGPOST=0.9986;RSQ=0.9755;ERATE=0.0004;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77617074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7371;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77617076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77617125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77617143 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77617182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77617243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77617323 . AT A 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7775;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77617441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0037;AVGPOST=0.9992;RSQ=0.9175;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77617457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77617560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1614;AVGPOST=0.9991;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 77617660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77617700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6159;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77617726 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77617745 . GA G 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7053;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77617761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77617962 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.867;LDAF=0.0184;AVGPOST=0.9979;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77618034 . T TC 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6828;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77618042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77618217 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77618260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77618343 . AAAAAC A 106 PASS INDEL;BAVGPOST=0.993;BRSQ=0.688;LDAF=0.0164;AVGPOST=0.9870;RSQ=0.6833;ERATE=0.0016;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77618358 . CAAAACAAA C 1744 PASS INDEL;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0224;AVGPOST=0.9936;RSQ=0.8964;ERATE=0.0007;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77618363 . C CA 1645 PASS INDEL;BAVGPOST=0.995;BRSQ=0.861;LDAF=0.0171;AVGPOST=0.9963;RSQ=0.9162;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77618396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2396;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 77618450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0637;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77618470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2404;AVGPOST=0.9976;RSQ=0.9952;ERATE=0.0004;THETA=0.0004;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 77618648 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6166;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77618726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77618889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2374;AVGPOST=0.9980;RSQ=0.9957;ERATE=0.0005;THETA=0.0006;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 77618911 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6083;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77618983 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1083;AVGPOST=0.9989;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77619064 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77619238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4587;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77619537 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0040;AVGPOST=0.9996;RSQ=0.9633;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77619548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9776;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77619600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77619621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0973;AVGPOST=0.9987;RSQ=0.9932;ERATE=0.0004;THETA=0.0004;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 77619762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0376;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 77619935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8403;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77619958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0311;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 77619973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7215;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77620001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77620035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9904;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=2163;AN=2184 GT:DS:GL:BD 0.99038464 1
1 77620129 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8383;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77620151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77620288 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77620319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77620375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9156;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77620392 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77620465 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77620531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9395;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77620554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8888;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77620586 . T TA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5192;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77620759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0084;AVGPOST=0.9986;RSQ=0.9331;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77621019 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8275;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77621266 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4683;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77621401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5569;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77621466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77621509 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0190;AVGPOST=0.9994;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77621829 . GATAAA G 9204 PASS INDEL;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0532;AVGPOST=0.9941;RSQ=0.9519;ERATE=0.0004;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 77621916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7877;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77622023 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2299;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 77622215 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9996;RSQ=0.9628;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77622348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77622431 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9289;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77622448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77622501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9988;RSQ=0.9775;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77622502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9179;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77622573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77622577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0651;AVGPOST=0.9988;RSQ=0.9913;ERATE=0.0003;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 77622731 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9419;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77622733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1668;AVGPOST=0.9973;RSQ=0.9930;ERATE=0.0006;THETA=0.0005;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 77622764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77622769 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0140;AVGPOST=0.9993;RSQ=0.9769;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77622836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.9921;AVGPOST=0.9994;RSQ=0.9668;ERATE=0.0003;THETA=0.0007;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 77622883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6401;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77623057 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77623138 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6217;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77623139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.728;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.7428;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77623184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2369;AVGPOST=0.9987;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 77623207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0099;AVGPOST=0.9992;RSQ=0.9652;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77623289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77623304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6762;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77623313 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77623411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6078;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77623741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8039;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77623753 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0034;AVGPOST=0.9980;RSQ=0.7625;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77623762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8033;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77623763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.4802;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77623802 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8873;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77623806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7403;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77623890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.813;LDAF=0.9777;AVGPOST=0.9787;RSQ=0.6442;ERATE=0.0021;THETA=0.0003;AC=2142;AN=2184 GT:DS:GL:BD 0.98076922 1
1 77623944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0039;AVGPOST=0.9964;RSQ=0.6077;ERATE=0.0008;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77623986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3411;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 77624001 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5309;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77624013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4798;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77624101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.963;LDAF=0.0896;AVGPOST=0.9912;RSQ=0.9675;ERATE=0.0006;THETA=0.0004;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 77624169 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8303;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77624257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7414;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77624395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77624465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77624501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0646;AVGPOST=0.9989;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 77624618 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2296;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0003;THETA=0.0011;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 77624786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0208;AVGPOST=0.9978;RSQ=0.9705;ERATE=0.0004;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77624853 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.744;LDAF=0.0068;AVGPOST=0.9951;RSQ=0.7454;ERATE=0.0005;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77624907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3416;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 77624997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9990;RSQ=0.9083;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77625005 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0082;AVGPOST=0.9975;RSQ=0.8697;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77625104 . GGGT G 153 PASS INDEL;BAVGPOST=0.997;BRSQ=0.745;LDAF=0.0076;AVGPOST=0.9978;RSQ=0.8791;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77625166 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5367;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77625238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9764;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77625284 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9917;AVGPOST=0.9988;RSQ=0.9323;ERATE=0.0004;THETA=0.0004;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 77625377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7384;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77625391 . TG T 292 PASS INDEL;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8115;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77625671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.879;LDAF=0.0130;AVGPOST=0.9968;RSQ=0.9026;ERATE=0.0005;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77625789 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77625840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2306;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 77625974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0644;AVGPOST=0.9992;RSQ=0.9955;ERATE=0.0003;THETA=0.0019;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 77626002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7487;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77626186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.489;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6236;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77626202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0647;AVGPOST=0.9984;RSQ=0.9903;ERATE=0.0003;THETA=0.0004;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 77626203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9126;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77626230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0051;AVGPOST=0.9971;RSQ=0.7629;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77626263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77626434 . G GA 19 PASS INDEL;BAVGPOST=0.998;BRSQ=0.456;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4507;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77626443 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77626458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9490;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77626937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77627096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9908;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 77627250 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77627257 . C CA 264 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6746;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77627279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77627282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77627450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0640;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0006;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 77627534 rs113085801 CA C 8364 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0638;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77627590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9570;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77627598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9806;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77627713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0011;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77627783 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.9046;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77627810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0636;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77627816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77627962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77628000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0182;AVGPOST=0.9985;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77628158 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77628281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8440;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77628452 rs71588886 GA G 13771 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1085;AVGPOST=0.9985;RSQ=0.9933;ERATE=0.0004;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77628638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1664;AVGPOST=0.9987;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 77628733 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2373;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 77628734 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3419;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 77628882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7969;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77628906 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7447;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77628961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77628985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5857;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77629074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9307;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77629164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1668;AVGPOST=0.9974;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 77629171 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.9923;AVGPOST=0.9960;RSQ=0.8213;ERATE=0.0004;THETA=0.0003;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 77629407 . TAA T 190 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6220;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77629420 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0036;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77629444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0640;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0003;THETA=0.0003;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 77629445 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77629563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0205;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77629824 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77629840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3421;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0005;THETA=0.0003;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 77629953 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77630023 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2372;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0004;THETA=0.0001;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 77630053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5210;AVGPOST=0.9968;RSQ=0.9954;ERATE=0.0009;THETA=0.0003;AC=1136;AN=2184 GT:DS:GL:BD 0.52014655 1
1 77630064 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7858;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77630065 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0348;AVGPOST=0.9984;RSQ=0.9836;ERATE=0.0003;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 77630232 . G GA 180 PASS INDEL;BAVGPOST=0.974;BRSQ=0.569;LDAF=0.0511;AVGPOST=0.9416;RSQ=0.5168;ERATE=0.0163;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 77630336 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6620;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77630377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7376;ERATE=0.0007;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77630396 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77630419 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2324;AVGPOST=0.9968;RSQ=0.9942;ERATE=0.0005;THETA=0.0003;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 77630429 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2373;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 77630517 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0065;AVGPOST=0.9993;RSQ=0.9601;ERATE=0.0003;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77630607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9536;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77630731 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77630796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7406;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77630854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6949;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77630872 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5744;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77630916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77630959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5016;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77631093 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8222;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77631190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1068;AVGPOST=0.9992;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 77631258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77631269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77631417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5169;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77631526 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6714;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77631680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6827;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77631844 . CTATAT C 166 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4556;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77631955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9876;AVGPOST=0.9997;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=2157;AN=2184 GT:DS:GL:BD 0.98763734 1
1 77632065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0636;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77632170 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0139;AVGPOST=0.9993;RSQ=0.9780;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77632188 rs67710068 T TA 19912 PASS INDEL;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1626;AVGPOST=0.9962;RSQ=0.9901;ERATE=0.0010;THETA=0.0002;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 77632198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1672;AVGPOST=0.9988;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 77632216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0635;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77632270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9886;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0003;THETA=0.0002;AC=2159;AN=2184 GT:DS:GL:BD 0.98855311 1
1 77632448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77632469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77632554 . AC A 1400 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0149;AVGPOST=0.9993;RSQ=0.9789;ERATE=0.0004;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77632637 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77632773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.8052;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77632843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1617;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 77632872 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1065;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 77632884 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8803;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77632948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77632991 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0654;AVGPOST=0.9973;RSQ=0.9853;ERATE=0.0004;THETA=0.0003;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 77633066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1614;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 77633093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8438;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77633212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9986;RSQ=0.9001;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77633247 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77633256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9993;RSQ=0.9860;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77633465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9298;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77633591 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2370;AVGPOST=0.9968;RSQ=0.9933;ERATE=0.0004;THETA=0.0005;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 77633625 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0186;AVGPOST=0.9991;RSQ=0.9779;ERATE=0.0004;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77633715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9621;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77633716 . AG A 9407 PASS INDEL;BAVGPOST=0.982;BRSQ=0.960;LDAF=0.2477;AVGPOST=0.9816;RSQ=0.9640;ERATE=0.0017;THETA=0.0003;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 77633717 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.2372;AVGPOST=0.9929;RSQ=0.9856;ERATE=0.0007;THETA=0.0003;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 77633735 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0182;AVGPOST=0.9980;RSQ=0.9525;ERATE=0.0004;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77634037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6144;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77634074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0635;AVGPOST=0.9991;RSQ=0.9937;ERATE=0.0004;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77634466 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1673;AVGPOST=0.9948;RSQ=0.9880;ERATE=0.0009;THETA=0.0002;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 77634645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77634891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0348;AVGPOST=0.9995;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 77634948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9886;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0003;THETA=0.0006;AC=2159;AN=2184 GT:DS:GL:BD 0.98855311 1
1 77635020 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77635148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1669;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0004;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 77635174 . TTC T 161 PASS INDEL;BAVGPOST=0.983;BRSQ=0.841;LDAF=0.0567;AVGPOST=0.9898;RSQ=0.9277;ERATE=0.0004;THETA=0.0002;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 77635175 . TCTC T 5598 PASS INDEL;BAVGPOST=0.991;BRSQ=0.926;LDAF=0.0635;AVGPOST=0.9981;RSQ=0.9864;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77635218 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0081;AVGPOST=0.9977;RSQ=0.8896;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77635300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6751;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77635334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8537;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77635360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7008;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77635406 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7728;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77635460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8512;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77635487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6722;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77635524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6130;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77635595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0197;AVGPOST=0.9992;RSQ=0.9836;ERATE=0.0003;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 77635653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77635656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77635738 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77636012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5285;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77636016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2368;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 77636129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77636243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3415;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 77636346 . A ATT 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7455;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77636484 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8627;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77636733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.5692;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77636743 . GATC G 171 PASS INDEL;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6703;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77636746 rs35150123 C CA 21984 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1647;AVGPOST=0.9950;RSQ=0.9878;ERATE=0.0008;THETA=0.0003;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 77636796 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3596;AVGPOST=0.9953;RSQ=0.9918;ERATE=0.0014;THETA=0.0004;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 77636814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.4826;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77636844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.9884;AVGPOST=0.9968;RSQ=0.8838;ERATE=0.0007;THETA=0.0008;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 77636892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0078;AVGPOST=0.9965;RSQ=0.8476;ERATE=0.0005;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77636897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.950;LDAF=0.1126;AVGPOST=0.9905;RSQ=0.9592;ERATE=0.0015;THETA=0.0004;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 77636928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0412;AVGPOST=0.9933;RSQ=0.9374;ERATE=0.0009;THETA=0.0002;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 77636979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.962;LDAF=0.1713;AVGPOST=0.9721;RSQ=0.9353;ERATE=0.0037;THETA=0.0006;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 77637043 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.971;LDAF=0.2590;AVGPOST=0.9561;RSQ=0.9186;ERATE=0.0030;THETA=0.0003;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 77637079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.921;LDAF=0.0682;AVGPOST=0.9884;RSQ=0.9284;ERATE=0.0013;THETA=0.0003;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 77637157 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0030;AVGPOST=0.9969;RSQ=0.6317;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77637264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9344;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77637349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.775;LDAF=0.0092;AVGPOST=0.9925;RSQ=0.6907;ERATE=0.0011;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77637350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77637400 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.743;LDAF=0.0106;AVGPOST=0.9937;RSQ=0.7563;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77637409 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0062;AVGPOST=0.9977;RSQ=0.8448;ERATE=0.0005;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77637450 rs10564415 CTGT C 1552 PASS INDEL;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0146;AVGPOST=0.9980;RSQ=0.9437;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77637572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5298;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77637663 rs34823278 CA C 10929 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1092;AVGPOST=0.9961;RSQ=0.9845;ERATE=0.0004;THETA=0.0002;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77637702 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77637711 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77637788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8596;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77637794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5540;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77637814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0191;AVGPOST=0.9990;RSQ=0.9817;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77637855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8730;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77638037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0331;AVGPOST=0.9994;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 77638100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3412;AVGPOST=0.9968;RSQ=0.9947;ERATE=0.0005;THETA=0.0002;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 77638126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6602;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77638181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7637;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77638390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0091;AVGPOST=0.9973;RSQ=0.8734;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77638433 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.3388;AVGPOST=0.9884;RSQ=0.9820;ERATE=0.0018;THETA=0.0003;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 77638465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.954;LDAF=0.2324;AVGPOST=0.9884;RSQ=0.9747;ERATE=0.0020;THETA=0.0004;AC=510;AN=2184 GT:DS:GL:BD 0.23351648 0
1 77638466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.957;LDAF=0.0406;AVGPOST=0.9940;RSQ=0.9404;ERATE=0.0005;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 77638470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0655;AVGPOST=0.9981;RSQ=0.9873;ERATE=0.0006;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 77638540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.635;LDAF=0.9658;AVGPOST=0.9655;RSQ=0.6227;ERATE=0.0040;THETA=0.0003;AC=2126;AN=2184 GT:DS:GL:BD 0.97344321 1
1 77638557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0059;AVGPOST=0.9953;RSQ=0.6937;ERATE=0.0007;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77638588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.3662;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77638603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.6073;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77638854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2306;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 77638903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77638997 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0189;AVGPOST=0.9990;RSQ=0.9814;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77639008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.8962;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77639298 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77639368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5515;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77639546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6745;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77639569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.9884;AVGPOST=0.9995;RSQ=0.9789;ERATE=0.0003;THETA=0.0004;AC=2159;AN=2184 GT:DS:GL:BD 0.98855311 1
1 77639598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9908;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0003;THETA=0.0003;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 77639711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9181;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77639856 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77639876 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0332;AVGPOST=0.9993;RSQ=0.9905;ERATE=0.0004;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 77639910 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.718;LDAF=0.9769;AVGPOST=0.9783;RSQ=0.6386;ERATE=0.0045;THETA=0.0003;AC=2143;AN=2184 GT:DS:GL:BD 0.98122710 1
1 77639952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9725;ERATE=0.0003;THETA=0.0001;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77640016 . GA G 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77640093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8245;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77640103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0212;AVGPOST=0.9984;RSQ=0.9687;ERATE=0.0004;THETA=0.0013;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77640166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1465;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 77640207 . AG A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77640229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77640245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77640412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8586;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77640491 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0065;AVGPOST=0.9986;RSQ=0.9105;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77640547 . TA T 12587 PASS INDEL;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1311;AVGPOST=0.9959;RSQ=0.9862;ERATE=0.0004;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 77640553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.7058;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77640789 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2372;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 77640803 . AT A 2293 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9979;RSQ=0.9631;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77640848 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6390;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77640856 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6461;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77640916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4580;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77640949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0647;AVGPOST=0.9993;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 77640950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0385;AVGPOST=0.9996;RSQ=0.9950;ERATE=0.0003;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 77640983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5933;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77641043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6719;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77641122 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6833;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77641127 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1926;AVGPOST=0.9973;RSQ=0.9927;ERATE=0.0004;THETA=0.0006;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 77641158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6600;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77641160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1307;AVGPOST=0.9966;RSQ=0.9887;ERATE=0.0003;THETA=0.0005;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 77641227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7209;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77641279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2382;AVGPOST=0.9964;RSQ=0.9921;ERATE=0.0007;THETA=0.0005;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 77641458 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5811;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77641461 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.1088;AVGPOST=0.9948;RSQ=0.9802;ERATE=0.0008;THETA=0.0002;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77641589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0041;AVGPOST=0.9964;RSQ=0.6199;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77641642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0643;AVGPOST=0.9983;RSQ=0.9892;ERATE=0.0004;THETA=0.0004;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 77641786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0332;AVGPOST=0.9993;RSQ=0.9911;ERATE=0.0003;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 77641973 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9439;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77642034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.663;LDAF=0.0029;AVGPOST=0.9964;RSQ=0.5616;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77642086 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77642120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6575;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77642139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5338;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77642183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77642259 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2298;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0005;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 77642266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6040;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77642696 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0635;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77642745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6249;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77642780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9983;RSQ=0.9718;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77642803 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77642890 rs3032934 ACT A 9926 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0644;AVGPOST=0.9972;RSQ=0.9827;ERATE=0.0003;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 77642917 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9993;RSQ=0.9652;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77642953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77643116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8804;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77643187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2303;AVGPOST=0.9961;RSQ=0.9926;ERATE=0.0006;THETA=0.0003;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 77643355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0148;AVGPOST=0.9993;RSQ=0.9790;ERATE=0.0004;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77643404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5104;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77643430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6875;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77643464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5607;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77643486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0225;AVGPOST=0.9983;RSQ=0.9664;ERATE=0.0003;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 77643528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4648;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77643622 . CAGA C 2696 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0191;AVGPOST=0.9989;RSQ=0.9790;ERATE=0.0003;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77643650 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8385;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77643793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6770;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77643873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8283;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77643876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7472;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77643921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0072;AVGPOST=0.9992;RSQ=0.9528;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77643926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6524;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77644019 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1474;AVGPOST=0.9982;RSQ=0.9944;ERATE=0.0004;THETA=0.0003;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 77644252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6819;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77644257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8515;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77644272 . TTAAG T 34842 PASS INDEL;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2375;AVGPOST=0.9956;RSQ=0.9903;ERATE=0.0009;THETA=0.0005;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 77644289 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0208;AVGPOST=0.9995;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77644306 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9994;RSQ=0.9877;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77644309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77644354 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0503;AVGPOST=0.9985;RSQ=0.9868;ERATE=0.0004;THETA=0.0002;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 77644415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1707;AVGPOST=0.9958;RSQ=0.9900;ERATE=0.0005;THETA=0.0004;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 77644417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0349;AVGPOST=0.9995;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 77644533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7172;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77644592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77644597 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1612;AVGPOST=0.9991;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 77644601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9156;ERATE=0.0008;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77644629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5713;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77644646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1664;AVGPOST=0.9969;RSQ=0.9928;ERATE=0.0006;THETA=0.0002;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 77644700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77644705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77644768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9189;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77644806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1080;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77644808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77644826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6144;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77644843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77644957 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7923;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77645026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9332;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77645114 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9988;RSQ=0.9745;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77645272 . T TC 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77645292 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77645454 . TATAG T 7932 PASS INDEL;BAVGPOST=0.990;BRSQ=0.922;LDAF=0.0613;AVGPOST=0.9973;RSQ=0.9803;ERATE=0.0005;THETA=0.0006;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 77645721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.9918;AVGPOST=0.9986;RSQ=0.9238;ERATE=0.0004;THETA=0.0004;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 77645857 . AT A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4733;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77645944 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77646061 . C CTAT 13357 PASS INDEL;BAVGPOST=0.970;BRSQ=0.917;LDAF=0.1993;AVGPOST=0.9789;RSQ=0.9546;ERATE=0.0006;THETA=0.0003;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 77646065 . T TA 1220 PASS INDEL;BAVGPOST=0.958;BRSQ=0.863;LDAF=0.1715;AVGPOST=0.9652;RSQ=0.9109;ERATE=0.0006;THETA=0.0002;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 77646069 . TA T 677 PASS INDEL;BAVGPOST=0.995;BRSQ=0.906;LDAF=0.0321;AVGPOST=0.9781;RSQ=0.7427;ERATE=0.0045;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 77646070 rs10641201 A AGTT 8185 PASS INDEL;BAVGPOST=0.968;BRSQ=0.899;LDAF=0.1800;AVGPOST=0.9456;RSQ=0.8687;ERATE=0.0060;THETA=0.0005;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 77646095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0072;AVGPOST=0.9984;RSQ=0.9041;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77646263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8010;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77646403 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77646663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6265;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77646743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.944;LDAF=0.0616;AVGPOST=0.9975;RSQ=0.9833;ERATE=0.0004;THETA=0.0002;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 77646828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77646851 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0273;AVGPOST=0.9974;RSQ=0.9618;ERATE=0.0003;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77646870 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0273;AVGPOST=0.9976;RSQ=0.9640;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77646983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7142;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77646989 . T TA 13 PASS INDEL;BAVGPOST=0.998;BRSQ=0.558;LDAF=0.0060;AVGPOST=0.9941;RSQ=0.5950;ERATE=0.0011;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77647169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.516;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4676;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77647177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.6168;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77647201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9983;RSQ=0.4754;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77647265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77647282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77647347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5956;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77647409 . CT C 471 PASS INDEL;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0043;AVGPOST=0.9963;RSQ=0.6623;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77647415 . C CA 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5650;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77647420 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8972;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77647445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77647469 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6142;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77647539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7842;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77647627 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6150;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77647893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.9886;AVGPOST=0.9995;RSQ=0.9797;ERATE=0.0003;THETA=0.0006;AC=2159;AN=2184 GT:DS:GL:BD 0.98855311 1
1 77647959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7971;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77648003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0204;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77648168 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5398;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77648269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77648289 . CT C 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77648309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1083;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 77648342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8097;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77648389 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.9876;AVGPOST=0.9936;RSQ=0.7788;ERATE=0.0010;THETA=0.0005;AC=2162;AN=2184 GT:DS:GL:BD 0.98992676 1
1 77648467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.9907;AVGPOST=0.9994;RSQ=0.9693;ERATE=0.0003;THETA=0.0002;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 77648531 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.8264;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77648605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77648674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77648752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0146;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77648832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1085;AVGPOST=0.9993;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 77648858 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77648895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77648908 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77648948 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77649004 . T TC 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5064;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77649006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8469;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77649202 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9329;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77649241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1608;AVGPOST=0.9983;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 77649267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77649317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77649343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8627;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77649396 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9919;AVGPOST=0.9993;RSQ=0.9722;ERATE=0.0003;THETA=0.0035;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 77649415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5205;AVGPOST=0.9991;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=1136;AN=2184 GT:DS:GL:BD 0.52014655 1
1 77649465 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6034;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77649474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7640;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77649485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77649529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77649708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.847;LDAF=0.0078;AVGPOST=0.9961;RSQ=0.8036;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77649894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2370;AVGPOST=0.9977;RSQ=0.9954;ERATE=0.0005;THETA=0.0002;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 77649978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1673;AVGPOST=0.9994;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 77649996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77650179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8839;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77650224 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7399;ERATE=0.0004;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77650391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0043;AVGPOST=0.9951;RSQ=0.5724;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77650404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0640;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 77650483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1303;AVGPOST=0.9964;RSQ=0.9874;ERATE=0.0003;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 77650794 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6615;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77650808 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2365;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 77650825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77650934 . G GT 154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77650983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0400;AVGPOST=0.9979;RSQ=0.9805;ERATE=0.0003;THETA=0.0002;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 77651125 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0120;AVGPOST=0.9988;RSQ=0.9622;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77651193 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0097;AVGPOST=0.9995;RSQ=0.9755;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77651194 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0098;AVGPOST=0.9984;RSQ=0.9274;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77651261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1662;AVGPOST=0.9987;RSQ=0.9966;ERATE=0.0005;THETA=0.0004;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 77651387 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5637;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77651456 . T TG 120 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6616;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77651542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5450;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77651558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6649;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77651661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9456;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77651735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.5519;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77651753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8939;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77651900 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.492;LDAF=0.0029;AVGPOST=0.9971;RSQ=0.6110;ERATE=0.0008;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77651926 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77651936 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1611;AVGPOST=0.9975;RSQ=0.9932;ERATE=0.0004;THETA=0.0004;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 77651943 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1079;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77652044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9785;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77652088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0056;AVGPOST=0.9985;RSQ=0.8934;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77652238 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77652367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7478;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77652405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2376;AVGPOST=0.9981;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 77652462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0160;AVGPOST=0.9991;RSQ=0.9806;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77652471 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0041;AVGPOST=0.9987;RSQ=0.8710;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77652477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4600;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77652544 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77652558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6936;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77652561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6633;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77652656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8053;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77652725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0218;AVGPOST=0.9996;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77652729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77652789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4660;AVGPOST=0.9979;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=1018;AN=2184 GT:DS:GL:BD 0.46611720 0
1 77652957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77652961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0641;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 77653091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77653118 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77653174 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.7760;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77653247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77653305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8509;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77653308 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7797;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77653367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.961;LDAF=0.0625;AVGPOST=0.9952;RSQ=0.9667;ERATE=0.0006;THETA=0.0004;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 77653368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0191;AVGPOST=0.9994;RSQ=0.9883;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77653469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77653498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.6974;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77653541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9571;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77653653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77653713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0633;AVGPOST=0.9981;RSQ=0.9881;ERATE=0.0005;THETA=0.0002;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 77653723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2398;AVGPOST=0.9955;RSQ=0.9903;ERATE=0.0010;THETA=0.0004;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 77653730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8859;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77653752 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77653877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.966;LDAF=0.7815;AVGPOST=0.9814;RSQ=0.9581;ERATE=0.0014;THETA=0.0004;AC=1716;AN=2184 GT:DS:GL:BD 0.78571427 1
1 77653938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.628;LDAF=0.0056;AVGPOST=0.9967;RSQ=0.7697;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77653947 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.729;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5446;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77653961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77653999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9054;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77654015 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1218;AVGPOST=0.9981;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 77654027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.704;LDAF=0.0057;AVGPOST=0.9948;RSQ=0.6362;ERATE=0.0009;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77654042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0035;AVGPOST=0.9972;RSQ=0.6615;ERATE=0.0004;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77654065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77654087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0048;AVGPOST=0.9972;RSQ=0.7528;ERATE=0.0007;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77654118 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.969;LDAF=0.1628;AVGPOST=0.9876;RSQ=0.9693;ERATE=0.0013;THETA=0.0003;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 77654222 . C CGGTCCTGT 367 PASS INDEL;BAVGPOST=0.988;BRSQ=0.555;LDAF=0.0199;AVGPOST=0.9924;RSQ=0.8597;ERATE=0.0005;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77654253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0649;AVGPOST=0.9968;RSQ=0.9795;ERATE=0.0007;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77654334 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77654395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.901;LDAF=0.0212;AVGPOST=0.9970;RSQ=0.9451;ERATE=0.0005;THETA=0.0001;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77654449 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0505;AVGPOST=0.9992;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 77654470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.1923;AVGPOST=0.9974;RSQ=0.9933;ERATE=0.0003;THETA=0.0002;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 77654485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7919;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77654524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77654581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9639;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77654775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77654868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7437;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77654886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0209;AVGPOST=0.9994;RSQ=0.9873;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77655130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8776;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77655415 . TATATATATATATATATATAC T 7896 PASS INDEL;BAVGPOST=0.686;BRSQ=0.413;LDAF=0.4951;AVGPOST=0.6356;RSQ=0.3415;ERATE=0.0566;THETA=0.0002;AC=1057;AN=2184 GT:DS:GL:BD 0.48397437 0
1 77655501 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.3345;ERATE=0.0005;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77655554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1095;AVGPOST=0.9976;RSQ=0.9904;ERATE=0.0005;THETA=0.0002;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 77655651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1670;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 77655680 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1076;AVGPOST=0.9984;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77655692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.939;LDAF=0.0816;AVGPOST=0.9890;RSQ=0.9504;ERATE=0.0005;THETA=0.0002;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 77655856 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7760;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77655910 . C CA 133 PASS INDEL;BAVGPOST=0.981;BRSQ=0.547;LDAF=0.0470;AVGPOST=0.9426;RSQ=0.4850;ERATE=0.0145;THETA=0.0001;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77655938 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7224;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77655950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0378;AVGPOST=0.9993;RSQ=0.9926;ERATE=0.0003;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 77655987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0051;AVGPOST=0.9986;RSQ=0.8866;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77656159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2375;AVGPOST=0.9951;RSQ=0.9905;ERATE=0.0008;THETA=0.0003;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 77656297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6381;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77656581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7898;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77656592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77656646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8960;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77656720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9787;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77656824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77656887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1603;AVGPOST=0.9990;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 77656984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9729;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77656998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5926;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77657108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77657134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77657280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8476;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77657668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.9907;AVGPOST=0.9996;RSQ=0.9788;ERATE=0.0003;THETA=0.0002;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 77657700 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5379;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77657757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.5029;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77657769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0682;AVGPOST=0.9941;RSQ=0.9678;ERATE=0.0009;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 77657822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.5564;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77657834 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0652;AVGPOST=0.9977;RSQ=0.9844;ERATE=0.0006;THETA=0.0003;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 77657862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77657873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77657980 rs34113198 CAAAT C 28021 PASS INDEL;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1672;AVGPOST=0.9980;RSQ=0.9946;ERATE=0.0006;THETA=0.0004;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 77658007 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77658092 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4633;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77658176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1469;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 77658185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0650;AVGPOST=0.9986;RSQ=0.9911;ERATE=0.0003;THETA=0.0001;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 77658277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.705;LDAF=0.0071;AVGPOST=0.9953;RSQ=0.7394;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77658338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.625;LDAF=0.0059;AVGPOST=0.9928;RSQ=0.5765;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77658362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1450;AVGPOST=0.9973;RSQ=0.9925;ERATE=0.0004;THETA=0.0004;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 77658516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5602;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77658626 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6378;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77658721 . CT C 30 PASS INDEL;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0059;AVGPOST=0.9955;RSQ=0.6766;ERATE=0.0007;THETA=0.0020;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77658801 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9323;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77658993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77659100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0042;AVGPOST=0.9985;RSQ=0.8587;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77659173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77659225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6684;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77659296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77659315 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9922;AVGPOST=0.9997;RSQ=0.9809;ERATE=0.0003;THETA=0.0002;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 77659481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7560;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77659716 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7759;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77659756 rs35553970 C CAA 60554 PASS INDEL;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.3386;AVGPOST=0.9878;RSQ=0.9797;ERATE=0.0042;THETA=0.0005;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 77659997 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0002;AVGPOST=0.9998;RSQ=0.0862;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77660074 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9700;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77660118 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6292;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77660162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0781;AVGPOST=0.9970;RSQ=0.9840;ERATE=0.0007;THETA=0.0003;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 77660214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6737;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77660265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7178;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77660339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77660343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0504;AVGPOST=0.9992;RSQ=0.9926;ERATE=0.0003;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 77660362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0106;AVGPOST=0.9990;RSQ=0.9616;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77660580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77660587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9855;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77660661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77660706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77660835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77660883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77660884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77660920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77661175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3415;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 77661221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77661421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6796;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77661452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9918;AVGPOST=0.9990;RSQ=0.9424;ERATE=0.0004;THETA=0.0002;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 77661483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0640;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 77661503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0043;AVGPOST=0.9971;RSQ=0.7089;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77661538 . CA C 272 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7113;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77661641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5746;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77661719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77661734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9606;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77661889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6273;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77661939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77661981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0635;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77662002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1609;AVGPOST=0.9974;RSQ=0.9938;ERATE=0.0003;THETA=0.0005;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 77662021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5736;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77662096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77662097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0077;AVGPOST=0.9956;RSQ=0.8184;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77662134 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77662216 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0196;AVGPOST=0.9992;RSQ=0.9833;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77662226 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77662287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.4003;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77662369 . GTTGT G 311 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.8120;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77662433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9764;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77662484 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.852;LDAF=0.0113;AVGPOST=0.9965;RSQ=0.8738;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77662564 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5650;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77662636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1669;AVGPOST=0.9976;RSQ=0.9941;ERATE=0.0004;THETA=0.0002;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 77662693 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.8031;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77662704 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9496;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77662955 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77663012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9763;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77663123 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77663270 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1080;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77663490 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8946;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77663603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0062;AVGPOST=0.9991;RSQ=0.9386;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77663885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4689;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77664236 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.4726;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77664253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.828;LDAF=0.0049;AVGPOST=0.9981;RSQ=0.8466;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77664321 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.548;LDAF=0.0043;AVGPOST=0.9960;RSQ=0.6545;ERATE=0.0006;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77664378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8793;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77664422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.8328;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77664423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5697;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77664492 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5202;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77664549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.2375;AVGPOST=0.9977;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 77664671 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8213;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77664673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77664755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77664762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9697;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77664791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1672;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 77664800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9368;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77664953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6520;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77664999 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9187;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77665144 . TA T 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.518;LDAF=0.0036;AVGPOST=0.9969;RSQ=0.6449;ERATE=0.0007;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77665305 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77665382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77665412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7594;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77665452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9524;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77665470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0048;AVGPOST=0.9972;RSQ=0.7823;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77665506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4467;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77665661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77665739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8386;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77665811 . A AG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4059;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77665828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7766;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77665946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8263;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77665949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77665966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77665969 . AGAAGCAT A 84 PASS INDEL;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4247;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77666044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9163;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77666126 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.829;LDAF=0.0323;AVGPOST=0.9914;RSQ=0.8957;ERATE=0.0005;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 77666194 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0637;AVGPOST=0.9992;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77666257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77666448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8526;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77666589 . AAC A 2472 PASS INDEL;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0231;AVGPOST=0.9964;RSQ=0.9297;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 77666733 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77666796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.8962;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77666901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4133;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77667041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7878;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77667059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8232;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77667250 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77667295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0091;AVGPOST=0.9950;RSQ=0.8071;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77667506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.902;LDAF=0.9880;AVGPOST=0.9988;RSQ=0.9558;ERATE=0.0005;THETA=0.0002;AC=2159;AN=2184 GT:DS:GL:BD 0.98855311 1
1 77667564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8515;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77667569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9169;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77667692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0211;AVGPOST=0.9979;RSQ=0.9672;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77667709 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.2285;AVGPOST=0.9930;RSQ=0.9859;ERATE=0.0007;THETA=0.0003;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 77667724 rs35704125 TG T 13930 PASS INDEL;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.1638;AVGPOST=0.9920;RSQ=0.9810;ERATE=0.0010;THETA=0.0004;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 77667726 . GA G 1760 PASS INDEL;BAVGPOST=0.971;BRSQ=0.911;LDAF=0.1562;AVGPOST=0.9856;RSQ=0.9634;ERATE=0.0004;THETA=0.0004;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 77667751 . AT A 7775 PASS INDEL;BAVGPOST=0.988;BRSQ=0.965;LDAF=0.1673;AVGPOST=0.9828;RSQ=0.9598;ERATE=0.0030;THETA=0.0004;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 77667788 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77667825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6657;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77668078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77668203 . GAC G 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4603;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77668243 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5646;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77668410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77668569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0378;AVGPOST=0.9974;RSQ=0.9731;ERATE=0.0003;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 77668626 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6736;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77668728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77668730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6606;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77668783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77668795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77668844 rs74942632 C CAAT 17851 PASS INDEL;BAVGPOST=0.992;BRSQ=0.950;LDAF=0.0747;AVGPOST=0.9936;RSQ=0.9679;ERATE=0.0004;THETA=0.0004;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 77668857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1660;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 77668933 . TA T 141 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5285;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77669008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0636;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77669034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0106;AVGPOST=0.9984;RSQ=0.9384;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77669061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6611;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77669114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3410;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0005;THETA=0.0003;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 77669142 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9995;RSQ=0.9873;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77669168 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77669177 . GCTACAGAGCA G 1118 PASS INDEL;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0055;AVGPOST=0.9955;RSQ=0.7018;ERATE=0.0008;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77669304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0325;AVGPOST=0.9988;RSQ=0.9823;ERATE=0.0004;THETA=0.0002;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 77669354 . CG C 1196 PASS INDEL;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0111;AVGPOST=0.9976;RSQ=0.9291;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77669599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77669708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77669709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.900;LDAF=0.0163;AVGPOST=0.9981;RSQ=0.9534;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77669722 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9914;AVGPOST=0.9981;RSQ=0.9143;ERATE=0.0005;THETA=0.0003;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 77669768 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0142;AVGPOST=0.9979;RSQ=0.9420;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77669904 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2382;AVGPOST=0.9966;RSQ=0.9932;ERATE=0.0005;THETA=0.0002;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 77669928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6777;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77669930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1615;AVGPOST=0.9979;RSQ=0.9943;ERATE=0.0005;THETA=0.0003;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 77669933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7289;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77669964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4728;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77670045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0036;AVGPOST=0.9964;RSQ=0.6488;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77670147 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6800;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77670209 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0636;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77670214 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.8217;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77670285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8226;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77670304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9888;AVGPOST=0.9954;RSQ=0.8229;ERATE=0.0008;THETA=0.0003;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 77670366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0057;AVGPOST=0.9933;RSQ=0.5917;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77670432 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77670475 . TA T 2497 PASS INDEL;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0272;AVGPOST=0.9971;RSQ=0.9573;ERATE=0.0004;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 77670486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1663;AVGPOST=0.9981;RSQ=0.9952;ERATE=0.0004;THETA=0.0001;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 77670538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0100;AVGPOST=0.9988;RSQ=0.9506;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77670547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1455;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 77670581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7953;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77670645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8759;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77670715 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4737;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77670740 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1612;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0005;THETA=0.0002;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 77670820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7613;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77670921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0132;AVGPOST=0.9995;RSQ=0.9868;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77670980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7942;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77671106 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77671112 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77671272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77671528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0692;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0003;THETA=0.0002;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 77671546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3590;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 77671548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3584;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0003;THETA=0.0001;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 77671679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3412;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0006;THETA=0.0003;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 77671779 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8606;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77671867 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1933;AVGPOST=0.9986;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 77671902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77671952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8396;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77672018 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7296;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77672036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9764;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77672074 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77672091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77672257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77672381 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77672449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77672452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77672558 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77672589 . T TGA 4044 PASS INDEL;BAVGPOST=0.996;BRSQ=0.880;LDAF=0.0178;AVGPOST=0.9976;RSQ=0.9460;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77672622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8401;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77673020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5524;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77673102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8794;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77673422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9253;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77673514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8379;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77673517 . G GT 234 PASS INDEL;BAVGPOST=0.993;BRSQ=0.617;LDAF=0.0183;AVGPOST=0.9809;RSQ=0.5783;ERATE=0.0043;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77673526 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1099;AVGPOST=0.9980;RSQ=0.9924;ERATE=0.0004;THETA=0.0003;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 77673553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8193;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77673996 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.789;LDAF=0.0122;AVGPOST=0.9966;RSQ=0.8964;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77674049 . A AT 101 PASS INDEL;BAVGPOST=0.998;BRSQ=0.701;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9045;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77674060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5720;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77674073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77674084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0381;AVGPOST=0.9987;RSQ=0.9874;ERATE=0.0004;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 77674402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6460;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77674430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0278;AVGPOST=0.9992;RSQ=0.9897;ERATE=0.0004;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77674494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1660;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 77674533 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1923;AVGPOST=0.9964;RSQ=0.9909;ERATE=0.0004;THETA=0.0002;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 77674593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77674852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0034;AVGPOST=0.9974;RSQ=0.7208;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77675094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77675232 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.719;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.8014;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77675257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77675275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0218;AVGPOST=0.9992;RSQ=0.9844;ERATE=0.0004;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77675322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.7780;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77675438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1663;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 77675884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7660;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77676081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77676162 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77676250 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77676309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7164;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77676413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0145;AVGPOST=0.9997;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77676524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77676551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9794;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77676640 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9835;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77676683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4602;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77676967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0022;AVGPOST=0.9963;RSQ=0.3871;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77677239 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77677251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77677355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9007;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77677448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7737;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77677454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0117;AVGPOST=0.9984;RSQ=0.9429;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77677516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0386;AVGPOST=0.9979;RSQ=0.9802;ERATE=0.0004;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 77677699 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77677751 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6452;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77677884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77677957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.7863;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77677979 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0967;AVGPOST=0.9991;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 77678198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5931;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77678247 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6158;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77678339 . G GT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7546;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77678350 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9802;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77678375 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0094;AVGPOST=0.9984;RSQ=0.9438;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77678408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0052;AVGPOST=0.9977;RSQ=0.8277;ERATE=0.0005;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77678611 . GAATTT G 845 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77678713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.637;LDAF=0.0073;AVGPOST=0.9934;RSQ=0.6423;ERATE=0.0014;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77679024 . G GA 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77679058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0277;AVGPOST=0.9994;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77679469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77679503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0198;AVGPOST=0.9988;RSQ=0.9762;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77679525 . C CA 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7715;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77679574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.1627;AVGPOST=0.9969;RSQ=0.9922;ERATE=0.0003;THETA=0.0005;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 77679618 rs34193405 GA G 23144 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1668;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 77679672 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77679755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77679774 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7104;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77679831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1647;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 77679977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2376;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 77680225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0640;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 77680242 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0225;AVGPOST=0.9996;RSQ=0.9922;ERATE=0.0003;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 77680316 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9977;RSQ=0.8730;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77680424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77680507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0271;AVGPOST=0.9988;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 77680549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5093;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77680608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0641;AVGPOST=0.9994;RSQ=0.9956;ERATE=0.0003;THETA=0.0001;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 77680670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77680806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77680850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.3493;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77680921 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0060;AVGPOST=0.9973;RSQ=0.8238;ERATE=0.0010;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77681112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2376;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 77681155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8667;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77681157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7792;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77681187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5332;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77681217 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9347;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77681308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77681348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0175;AVGPOST=0.9996;RSQ=0.9923;ERATE=0.0003;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77681401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77681446 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6204;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77681464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77681476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5198;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77681487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.933;LDAF=0.0200;AVGPOST=0.9978;RSQ=0.9562;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77681547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5129;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77681550 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5099;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77681551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4979;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77681618 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77681619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7398;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77681633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0387;AVGPOST=0.9976;RSQ=0.9747;ERATE=0.0004;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 77681679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77681719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1659;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0004;THETA=0.0002;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 77681735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0669;AVGPOST=0.9962;RSQ=0.9784;ERATE=0.0004;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 77681827 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77681901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9897;AVGPOST=0.9992;RSQ=0.9617;ERATE=0.0004;THETA=0.0004;AC=2162;AN=2184 GT:DS:GL:BD 0.98992676 1
1 77681922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3903;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77681959 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77682109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77682184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77682257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1604;AVGPOST=0.9977;RSQ=0.9946;ERATE=0.0004;THETA=0.0002;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 77682320 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77682323 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.974;LDAF=0.1510;AVGPOST=0.9950;RSQ=0.9873;ERATE=0.0011;THETA=0.0005;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 77682474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77682512 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77682561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5618;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77682637 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9725;ERATE=0.0003;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77682665 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.7914;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77682683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7877;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77683053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77683106 . AAGTT A 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77683121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77683146 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5543;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77683325 . AAAC A 402 PASS INDEL;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8820;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77683353 . GA G 173 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77683618 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0199;AVGPOST=0.9992;RSQ=0.9858;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 77683671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0227;AVGPOST=0.9993;RSQ=0.9862;ERATE=0.0004;THETA=0.0001;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 77683779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1931;AVGPOST=0.9976;RSQ=0.9937;ERATE=0.0004;THETA=0.0003;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 77684013 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8494;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77684216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1079;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0003;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77684421 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.916;LDAF=0.0175;AVGPOST=0.9994;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77684434 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77684623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1665;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 77684674 . G GAGTA 470 PASS INDEL;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7809;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77684699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77684879 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77684890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8380;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77684895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9870;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77684966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7221;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77684982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77685042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1664;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 77685067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77685089 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8770;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77685344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1666;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0004;THETA=0.0005;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 77685430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.866;LDAF=0.4537;AVGPOST=0.8701;RSQ=0.7963;ERATE=0.0484;THETA=0.0002;AC=988;AN=2184 GT:DS:GL:BD 0.45238096 0
1 77685482 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9426;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77685507 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8776;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77685603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0198;AVGPOST=0.9995;RSQ=0.9879;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77685683 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2303;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 77685688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77685690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77685745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77685839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8594;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77685865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77685933 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1082;AVGPOST=0.9957;RSQ=0.9841;ERATE=0.0005;THETA=0.0003;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77685937 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3599;AVGPOST=0.9948;RSQ=0.9922;ERATE=0.0006;THETA=0.0003;AC=787;AN=2184 GT:DS:GL:BD 0.36034799 0
1 77686156 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0395;AVGPOST=0.9960;RSQ=0.9634;ERATE=0.0005;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 77686274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.8978;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77686324 . GTC G 4542 PASS INDEL;BAVGPOST=0.984;BRSQ=0.949;LDAF=0.1513;AVGPOST=0.9829;RSQ=0.9581;ERATE=0.0007;THETA=0.0002;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 77686333 . TTC T 4849 PASS INDEL;BAVGPOST=0.982;BRSQ=0.945;LDAF=0.1536;AVGPOST=0.9881;RSQ=0.9712;ERATE=0.0005;THETA=0.0005;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 77686378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5424;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77686407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77686411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=1.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0011;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 77686476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0224;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 77686596 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2374;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 77686646 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1620;AVGPOST=0.9974;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 77686666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77686762 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77686764 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77686862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0636;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77686969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2370;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 77686979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77686991 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.709;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.7104;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77687108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77687113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8443;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77687162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.632;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7011;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77687169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5499;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77687231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0038;AVGPOST=0.9983;RSQ=0.8167;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77687238 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6338;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77687491 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4741;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77687499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2285;AVGPOST=0.9968;RSQ=0.9926;ERATE=0.0005;THETA=0.0005;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 77687612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0113;AVGPOST=0.9957;RSQ=0.8546;ERATE=0.0005;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77687616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77687812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.839;LDAF=0.0241;AVGPOST=0.9957;RSQ=0.9270;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 77687852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8793;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77687977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9912;AVGPOST=0.9977;RSQ=0.9086;ERATE=0.0003;THETA=0.0004;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 77687978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77688000 . AC A 266 PASS INDEL;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0044;AVGPOST=0.9968;RSQ=0.6835;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77688038 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5120;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77688182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0209;AVGPOST=0.9996;RSQ=0.9933;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77688227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2381;AVGPOST=0.9973;RSQ=0.9943;ERATE=0.0006;THETA=0.0002;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 77688239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8509;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77688240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.6062;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77688251 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8202;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77688260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0103;AVGPOST=0.9994;RSQ=0.9705;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77688322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8303;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77688392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77688409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1074;AVGPOST=0.9986;RSQ=0.9941;ERATE=0.0003;THETA=0.0007;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77688488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6637;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77688548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5682;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77688646 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8187;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77688700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5843;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77688723 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9348;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77688819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77688821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77688834 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7430;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77688849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.828;LDAF=0.0124;AVGPOST=0.9945;RSQ=0.8386;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77689115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0183;AVGPOST=0.9987;RSQ=0.9707;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77689127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77689430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2367;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 77689482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8533;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77689545 . G GT 133 PASS INDEL;BAVGPOST=0.978;BRSQ=0.581;LDAF=0.0420;AVGPOST=0.9558;RSQ=0.5496;ERATE=0.0130;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 77689635 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1079;AVGPOST=0.9985;RSQ=0.9931;ERATE=0.0005;THETA=0.0009;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77689661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9199;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77689706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9141;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77689797 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77689888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.4872;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77689889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0030;AVGPOST=0.9956;RSQ=0.5272;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77689985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5235;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77690005 . G GT 109 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4275;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77690074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8769;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77690133 . GAT G 1047 PASS INDEL;BAVGPOST=0.894;BRSQ=0.689;LDAF=0.1697;AVGPOST=0.9112;RSQ=0.7710;ERATE=0.0064;THETA=0.0012;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 77690136 rs5775377 CT C 9315 PASS INDEL;BAVGPOST=0.977;BRSQ=0.936;LDAF=0.2082;AVGPOST=0.9763;RSQ=0.9493;ERATE=0.0003;THETA=0.0004;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 77690138 rs5775378 CT C 9119 PASS INDEL;BAVGPOST=0.977;BRSQ=0.936;LDAF=0.2085;AVGPOST=0.9767;RSQ=0.9505;ERATE=0.0003;THETA=0.0003;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 77690278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77690293 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8052;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77690352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7937;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77690422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.8117;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77690483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8967;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77690499 . A ATAGGC 231 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77690566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6106;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77690567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8077;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77690720 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8878;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77690742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7457;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77690749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77690801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77690858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1664;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 77690868 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9205;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77691022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.944;LDAF=0.0398;AVGPOST=0.9969;RSQ=0.9725;ERATE=0.0003;THETA=0.0008;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 77691108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5719;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77691198 . C CA 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77691229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8321;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77691251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77691294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77691309 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3373;AVGPOST=0.9913;RSQ=0.9857;ERATE=0.0007;THETA=0.0009;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 77691396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.907;LDAF=0.0351;AVGPOST=0.9947;RSQ=0.9382;ERATE=0.0005;THETA=0.0010;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 77691405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77691430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0031;AVGPOST=0.9974;RSQ=0.7322;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77691683 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.744;LDAF=0.0095;AVGPOST=0.9951;RSQ=0.8037;ERATE=0.0005;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77692135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2316;AVGPOST=0.9981;RSQ=0.9956;ERATE=0.0006;THETA=0.0014;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 77692203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2370;AVGPOST=0.9970;RSQ=0.9929;ERATE=0.0005;THETA=0.0012;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 77692266 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77692279 . TTCATTAAGTTTA T 790 PASS INDEL;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0083;AVGPOST=0.9941;RSQ=0.7623;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77692355 . ATTTG A 78 PASS INDEL;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0126;AVGPOST=0.9840;RSQ=0.5069;ERATE=0.0030;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77692380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0148;AVGPOST=0.9995;RSQ=0.9836;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77692432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8813;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77692451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9195;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77692458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5402;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77692488 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6837;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77692490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77692518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0638;AVGPOST=0.9989;RSQ=0.9925;ERATE=0.0005;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77692646 rs60788926 TTTGA T 4039 PASS INDEL;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0292;AVGPOST=0.9964;RSQ=0.9524;ERATE=0.0003;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 77692690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77692877 . CCT C 183 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0180;AVGPOST=0.9991;RSQ=0.9757;ERATE=0.0003;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77692878 . CTCT C 3086 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0183;AVGPOST=0.9986;RSQ=0.9642;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77692885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77692941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0192;AVGPOST=0.9990;RSQ=0.9803;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77693118 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2331;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 77693161 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5557;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77693269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7957;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77693276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6884;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77693299 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0109;AVGPOST=0.9982;RSQ=0.9382;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77693362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77693520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77693978 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2416;AVGPOST=0.9957;RSQ=0.9902;ERATE=0.0004;THETA=0.0025;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 77694067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7634;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77694095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.5335;AVGPOST=0.9726;RSQ=0.9651;ERATE=0.0045;THETA=0.0087;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 77694116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5045;ERATE=0.0004;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77694342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7947;ERATE=0.0003;THETA=0.0097;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77694588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77694600 . T TAATC 79 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5711;ERATE=0.0005;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77694621 . CCTT C 207 PASS INDEL;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5662;ERATE=0.0006;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77694640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1630;AVGPOST=0.9941;RSQ=0.9861;ERATE=0.0004;THETA=0.0236;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 77695054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0108;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77695059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0064;AVGPOST=0.9980;RSQ=0.8969;ERATE=0.0003;THETA=0.0048;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77695070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77695092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8578;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77695124 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7136;ERATE=0.0003;THETA=0.0061;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77695147 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0129;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77695216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6842;ERATE=0.0006;THETA=0.0073;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77695317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0155;AVGPOST=0.9989;RSQ=0.9708;ERATE=0.0003;THETA=0.0291;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77695390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0046;AVGPOST=0.9992;RSQ=0.9252;ERATE=0.0003;THETA=0.0055;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77695473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0192;AVGPOST=0.9981;RSQ=0.9623;ERATE=0.0003;THETA=0.0154;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77695541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.967;LDAF=0.1278;AVGPOST=0.9848;RSQ=0.9520;ERATE=0.0009;THETA=0.0105;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 77695582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77695596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8211;ERATE=0.0004;THETA=0.0106;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77695636 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0003;THETA=0.0088;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77695659 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.974;LDAF=0.7465;AVGPOST=0.9850;RSQ=0.9700;ERATE=0.0005;THETA=0.0041;AC=1630;AN=2184 GT:DS:GL:BD 0.74633700 1
1 77695757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8483;ERATE=0.0005;THETA=0.0072;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77695820 . G GA 9 PASS INDEL;BAVGPOST=0.996;BRSQ=0.538;LDAF=0.0092;AVGPOST=0.9875;RSQ=0.4528;ERATE=0.0033;THETA=0.0023;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77695854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.0992;AVGPOST=0.9952;RSQ=0.9794;ERATE=0.0004;THETA=0.0065;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 77695880 . G GA 1756 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0096;AVGPOST=0.9981;RSQ=0.9130;ERATE=0.0005;THETA=0.0056;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77695947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.985;LDAF=0.4341;AVGPOST=0.9907;RSQ=0.9852;ERATE=0.0007;THETA=0.0002;AC=942;AN=2184 GT:DS:GL:BD 0.43131867 0
1 77695983 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0072;AVGPOST=0.9992;RSQ=0.9604;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77696032 rs67760014 CAG C 20659 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1349;AVGPOST=0.9969;RSQ=0.9901;ERATE=0.0004;THETA=0.0019;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 77696077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1348;AVGPOST=0.9977;RSQ=0.9933;ERATE=0.0004;THETA=0.0017;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 77696274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.553;LDAF=0.0199;AVGPOST=0.9771;RSQ=0.5567;ERATE=0.0050;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77696385 . CTT C 65 PASS INDEL;BAVGPOST=0.990;BRSQ=0.279;LDAF=0.0445;AVGPOST=0.9417;RSQ=0.4928;ERATE=0.0009;THETA=0.0034;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 77696416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5462;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77696489 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8311;AVGPOST=0.9973;RSQ=0.9922;ERATE=0.0003;THETA=0.0001;AC=1814;AN=2184 GT:DS:GL:BD 0.83058608 1
1 77696503 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0052;AVGPOST=0.9966;RSQ=0.7613;ERATE=0.0004;THETA=0.0018;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77696504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7588;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77696510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4149;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77696605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.8253;AVGPOST=0.9979;RSQ=0.9941;ERATE=0.0004;THETA=0.0005;AC=1801;AN=2184 GT:DS:GL:BD 0.82463372 1
1 77696705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6899;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77696756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0215;AVGPOST=0.9992;RSQ=0.9840;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77696822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1478;AVGPOST=0.9977;RSQ=0.9921;ERATE=0.0005;THETA=0.0009;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 77696846 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0104;AVGPOST=0.9987;RSQ=0.9445;ERATE=0.0003;THETA=0.0013;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77696940 . G GA 1721 PASS INDEL;BAVGPOST=0.983;BRSQ=0.771;LDAF=0.0556;AVGPOST=0.9526;RSQ=0.6703;ERATE=0.0080;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 77696961 . TAGAG T 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6998;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77696984 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77697013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.2146;AVGPOST=0.9924;RSQ=0.9835;ERATE=0.0010;THETA=0.0003;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 77697014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.685;LDAF=0.0179;AVGPOST=0.9904;RSQ=0.7869;ERATE=0.0007;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77697045 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.697;LDAF=0.9899;AVGPOST=0.9949;RSQ=0.8089;ERATE=0.0004;THETA=0.0027;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 77697132 . TC T 23 PASS INDEL;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7692;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77697370 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8168;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77697392 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77697395 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6392;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77697501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5671;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77697582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2463;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0006;THETA=0.0003;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 77697627 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6520;ERATE=0.0015;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77697735 rs58802604 TG T 12682 PASS INDEL;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.1099;AVGPOST=0.9986;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 77697874 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5811;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77697908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8294;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=1811;AN=2184 GT:DS:GL:BD 0.82921243 1
1 77698113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.9228;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77698219 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77698492 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77698495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9780;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77698576 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8278;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77698760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6046;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77698858 rs113558584 TTTTTC T 13437 PASS INDEL;BAVGPOST=0.984;BRSQ=0.939;LDAF=0.1467;AVGPOST=0.9899;RSQ=0.9677;ERATE=0.0013;THETA=0.0004;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 77698879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77698935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.8227;AVGPOST=0.9883;RSQ=0.9694;ERATE=0.0014;THETA=0.0003;AC=1800;AN=2184 GT:DS:GL:BD 0.82417583 1
1 77698941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.682;LDAF=0.0130;AVGPOST=0.9869;RSQ=0.6324;ERATE=0.0007;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77698965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.856;LDAF=0.0099;AVGPOST=0.9956;RSQ=0.8031;ERATE=0.0006;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77699022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0022;AVGPOST=0.9969;RSQ=0.4878;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77699039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7723;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77699071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1457;AVGPOST=0.9983;RSQ=0.9940;ERATE=0.0005;THETA=0.0001;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 77699190 . CTA C 532 PASS INDEL;BAVGPOST=0.998;BRSQ=0.798;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8400;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77699235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.4592;AVGPOST=0.9972;RSQ=0.9950;ERATE=0.0005;THETA=0.0003;AC=1003;AN=2184 GT:DS:GL:BD 0.45924908 0
1 77699308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77699316 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77699357 . G GC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5948;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77699425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0163;AVGPOST=0.9986;RSQ=0.9651;ERATE=0.0004;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77699493 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77699604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0215;AVGPOST=0.9995;RSQ=0.9889;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77699632 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0081;AVGPOST=0.9995;RSQ=0.9754;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77699641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2078;AVGPOST=0.9978;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 77699722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0118;AVGPOST=0.9983;RSQ=0.9445;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77699803 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77699812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7872;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77700010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7359;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77700050 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77700061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5379;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77700141 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9157;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77700196 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1459;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 77700234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77700387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7425;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77700439 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0198;AVGPOST=0.9997;RSQ=0.9921;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77700485 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6869;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77700502 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1887;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0003;THETA=0.0006;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 77700557 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8902;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77700694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8611;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77700723 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8303;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0004;THETA=0.0001;AC=1813;AN=2184 GT:DS:GL:BD 0.83012819 1
1 77700780 . TA T 970 PASS INDEL;BAVGPOST=0.962;BRSQ=0.778;LDAF=0.0920;AVGPOST=0.9774;RSQ=0.9028;ERATE=0.0018;THETA=0.0003;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 77700786 . AAATT A 13727 PASS INDEL;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0881;AVGPOST=0.9978;RSQ=0.9888;ERATE=0.0005;THETA=0.0003;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 77700791 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77700828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0071;AVGPOST=0.9979;RSQ=0.8813;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77700871 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0202;AVGPOST=0.9989;RSQ=0.9751;ERATE=0.0004;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77700901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.824;LDAF=0.0073;AVGPOST=0.9979;RSQ=0.8861;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77700928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4601;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0005;THETA=0.0002;AC=1003;AN=2184 GT:DS:GL:BD 0.45924908 0
1 77700956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6243;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77700999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0317;AVGPOST=0.9975;RSQ=0.9707;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 77701276 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77701278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6910;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77701323 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5543;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77701444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8672;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77701475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77701521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1357;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 77701593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7902;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77701760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77701796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2433;AVGPOST=0.9974;RSQ=0.9947;ERATE=0.0005;THETA=0.0004;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 77701802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2083;AVGPOST=0.9972;RSQ=0.9937;ERATE=0.0005;THETA=0.0003;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 77701981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.7040;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77702215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7973;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77702310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6423;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77702401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77702566 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5502;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77702585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7321;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77702732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8468;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77702819 . GTCT G 385 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8131;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77703114 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8304;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=1813;AN=2184 GT:DS:GL:BD 0.83012819 1
1 77703150 rs59252921 AC A 8934 PASS INDEL;BAVGPOST=0.634;BRSQ=0.412;LDAF=0.4824;AVGPOST=0.6907;RSQ=0.4895;ERATE=0.0673;THETA=0.0002;AC=1006;AN=2184 GT:DS:GL:BD 0.46062270 0
1 77703151 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.909;LDAF=0.7857;AVGPOST=0.9303;RSQ=0.8418;ERATE=0.0131;THETA=0.0003;AC=1760;AN=2184 GT:DS:GL:BD 0.80586082 1
1 77703157 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6050;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77703251 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0026;AVGPOST=0.9970;RSQ=0.5913;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77703303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4327;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77703358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4847;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77703366 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9422;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77703587 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5832;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77703617 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77703730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9842;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77704144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8032;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77704168 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7754;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77704321 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77704382 rs75073338 A ACT 127681 PASS INDEL;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.8293;AVGPOST=0.9927;RSQ=0.9803;ERATE=0.0015;THETA=0.0002;AC=1810;AN=2184 GT:DS:GL:BD 0.82875460 1
1 77704385 . C CTA 29840 PASS INDEL;BAVGPOST=0.945;BRSQ=0.833;LDAF=0.7629;AVGPOST=0.9103;RSQ=0.7957;ERATE=0.0397;THETA=0.0005;AC=1711;AN=2184 GT:DS:GL:BD 0.78342491 1
1 77704458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6610;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77704540 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77704563 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0120;AVGPOST=0.9987;RSQ=0.9558;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77704572 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.9948;AVGPOST=0.9982;RSQ=0.8765;ERATE=0.0003;THETA=0.0004;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 77704607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0114;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77704698 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5224;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77704768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.9199;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77704780 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77704951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6358;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77705018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4819;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77705102 . TA T 76 PASS INDEL;BAVGPOST=0.996;BRSQ=0.540;LDAF=0.0066;AVGPOST=0.9927;RSQ=0.5572;ERATE=0.0013;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77705312 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77705364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8493;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77705365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1459;AVGPOST=0.9986;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 77705408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77705420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1181;AVGPOST=0.9978;RSQ=0.9911;ERATE=0.0003;THETA=0.0002;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 77705428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2123;AVGPOST=0.9979;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 77705509 . A AG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4765;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77705511 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9785;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77705537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5300;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77705638 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7240;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77705667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77705820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3581;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0005;THETA=0.0005;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 77706085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0048;AVGPOST=0.9979;RSQ=0.8366;ERATE=0.0003;THETA=0.0027;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77706139 . GAAAC G 390 PASS INDEL;BAVGPOST=0.980;BRSQ=0.640;LDAF=0.0399;AVGPOST=0.9574;RSQ=0.5637;ERATE=0.0085;THETA=0.0001;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 77706155 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.963;LDAF=0.1826;AVGPOST=0.9889;RSQ=0.9730;ERATE=0.0026;THETA=0.0002;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 77706271 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77706322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9750;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77706374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8946;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77706383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9817;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77706680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4551;AVGPOST=0.9822;RSQ=0.9741;ERATE=0.0046;THETA=0.0006;AC=993;AN=2184 GT:DS:GL:BD 0.45467034 0
1 77706959 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8223;AVGPOST=0.9953;RSQ=0.9880;ERATE=0.0004;THETA=0.0002;AC=1799;AN=2184 GT:DS:GL:BD 0.82371795 1
1 77707037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.927;LDAF=0.7952;AVGPOST=0.9296;RSQ=0.8311;ERATE=0.0092;THETA=0.0004;AC=1775;AN=2184 GT:DS:GL:BD 0.81272894 1
1 77707046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.953;LDAF=0.2426;AVGPOST=0.9885;RSQ=0.9787;ERATE=0.0011;THETA=0.0003;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 77707055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.524;LDAF=0.0057;AVGPOST=0.9910;RSQ=0.3731;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77707100 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0214;AVGPOST=0.9967;RSQ=0.9354;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77707283 . T TA 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.4615;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77707310 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.2152;AVGPOST=0.9980;RSQ=0.9948;ERATE=0.0005;THETA=0.0003;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 77707346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77707351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5907;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77707391 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3281;AVGPOST=0.9971;RSQ=0.9948;ERATE=0.0006;THETA=0.0004;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 77707424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9766;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77707456 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0205;AVGPOST=0.9993;RSQ=0.9839;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 77707561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0076;AVGPOST=0.9979;RSQ=0.8971;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77707950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6317;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77708074 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8316;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77708077 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.7053;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77708094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9855;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77708097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0108;AVGPOST=0.9983;RSQ=0.9328;ERATE=0.0005;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77708411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77708414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6863;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77708543 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8721;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77708800 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77708847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8058;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77708853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0111;AVGPOST=0.9996;RSQ=0.9846;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77708940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1052;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 77708964 . C CTTTT 12458 PASS INDEL;BAVGPOST=0.948;BRSQ=0.867;LDAF=0.2814;AVGPOST=0.9320;RSQ=0.8623;ERATE=0.0270;THETA=0.0002;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 77709082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9598;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77709130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.6203;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77709196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77709277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7519;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77709326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2139;AVGPOST=0.9961;RSQ=0.9912;ERATE=0.0013;THETA=0.0004;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 77709340 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77709427 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0084;AVGPOST=0.9989;RSQ=0.9500;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77709451 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77709492 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77709568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77709686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6636;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77709778 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0021;AVGPOST=0.9969;RSQ=0.4589;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77709871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7035;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77709909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0059;AVGPOST=0.9985;RSQ=0.9076;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77709998 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4449;ERATE=0.0006;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77710109 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9689;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77710124 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5993;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77710351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.950;LDAF=0.1270;AVGPOST=0.9953;RSQ=0.9859;ERATE=0.0004;THETA=0.0003;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 77710714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0131;AVGPOST=0.9990;RSQ=0.9678;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77710944 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.770;LDAF=0.0074;AVGPOST=0.9980;RSQ=0.8896;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77710951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0047;AVGPOST=0.9981;RSQ=0.8496;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77711103 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0036;AVGPOST=0.9969;RSQ=0.6840;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77711189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8601;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77711197 . T TTA 18 PASS INDEL;BAVGPOST=0.998;BRSQ=0.590;LDAF=0.0079;AVGPOST=0.9922;RSQ=0.6297;ERATE=0.0010;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77711230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9107;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77711335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1851;AVGPOST=0.9939;RSQ=0.9846;ERATE=0.0010;THETA=0.0003;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 77711519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0125;AVGPOST=0.9985;RSQ=0.9495;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77711610 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0938;AVGPOST=0.9983;RSQ=0.9919;ERATE=0.0003;THETA=0.0006;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 77711808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7778;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77712029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8304;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77712068 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6446;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77712144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0104;AVGPOST=0.9970;RSQ=0.8809;ERATE=0.0007;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77712275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.330;LDAF=0.0054;AVGPOST=0.9973;RSQ=0.7700;ERATE=0.0008;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77712279 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.962;LDAF=0.1410;AVGPOST=0.9958;RSQ=0.9872;ERATE=0.0003;THETA=0.0005;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 77712332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.6597;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77712485 . CA C 174 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8989;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77712584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77712637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2423;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 77712792 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4872;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77712836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.817;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9640;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77712850 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9695;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77712954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5371;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77713041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8777;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77713144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8912;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77713168 . G GGAGTT 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7003;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77713179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77713326 . C CACGT 2730 PASS INDEL;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0116;AVGPOST=0.9983;RSQ=0.9393;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77713434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.934;LDAF=0.0623;AVGPOST=0.9944;RSQ=0.9677;ERATE=0.0003;THETA=0.0002;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 77713447 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2423;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 77713585 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77713595 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0213;AVGPOST=0.9994;RSQ=0.9868;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77713610 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1058;AVGPOST=0.9979;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 77713620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.6368;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77713677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0080;AVGPOST=0.9983;RSQ=0.9111;ERATE=0.0005;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77713906 . C CTAGA 13769 PASS INDEL;BAVGPOST=0.977;BRSQ=0.939;LDAF=0.2086;AVGPOST=0.9798;RSQ=0.9535;ERATE=0.0026;THETA=0.0002;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 77713909 . G GC 918 PASS INDEL;BAVGPOST=0.905;BRSQ=0.601;LDAF=0.1275;AVGPOST=0.9202;RSQ=0.7421;ERATE=0.0059;THETA=0.0003;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 77713926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6016;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77714121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5767;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77714122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7062;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77714182 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77714216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0103;AVGPOST=0.9988;RSQ=0.9551;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77714220 . C CA 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8398;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77714238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7961;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77714406 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8659;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77714425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7257;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77714431 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5611;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77714443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8645;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77714469 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0212;AVGPOST=0.9996;RSQ=0.9913;ERATE=0.0003;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77714477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77714509 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0211;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77714554 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8384;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77714615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6755;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77714679 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77714716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9998;RSQ=0.9922;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77714758 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4654;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0005;THETA=0.0005;AC=1015;AN=2184 GT:DS:GL:BD 0.46474358 0
1 77714815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6516;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77714883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9997;RSQ=0.9829;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77714973 . C CA 7857 PASS INDEL;BAVGPOST=0.985;BRSQ=0.972;LDAF=0.4489;AVGPOST=0.9774;RSQ=0.9661;ERATE=0.0035;THETA=0.0002;AC=988;AN=2184 GT:DS:GL:BD 0.45238096 0
1 77714975 rs34831159 A AT 58220 PASS INDEL;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.4620;AVGPOST=0.9929;RSQ=0.9891;ERATE=0.0006;THETA=0.0003;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 77714981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9997;RSQ=0.9821;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77715056 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8242;AVGPOST=0.9972;RSQ=0.9914;ERATE=0.0007;THETA=0.0003;AC=1799;AN=2184 GT:DS:GL:BD 0.82371795 1
1 77715265 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3261;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 77715575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77716104 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0089;AVGPOST=0.9990;RSQ=0.9620;ERATE=0.0003;THETA=0.0037;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77716345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.5906;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77716490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0198;AVGPOST=0.9995;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77716534 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8627;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77716641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3264;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 77716731 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8224;AVGPOST=0.9964;RSQ=0.9894;ERATE=0.0005;THETA=0.0003;AC=1797;AN=2184 GT:DS:GL:BD 0.82280219 1
1 77716760 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8288;AVGPOST=0.9982;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=1809;AN=2184 GT:DS:GL:BD 0.82829672 1
1 77717038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4916;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77717070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77717150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7721;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77717237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9785;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77717304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8891;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77717312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.7486;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77717555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1399;AVGPOST=0.9986;RSQ=0.9955;ERATE=0.0004;THETA=0.0002;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 77717655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5489;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77717699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9503;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77717861 . AC A 363 PASS INDEL;BAVGPOST=0.998;BRSQ=0.746;LDAF=0.0040;AVGPOST=0.9986;RSQ=0.8568;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77717989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5325;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77718052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77718218 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5938;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77718252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1187;AVGPOST=0.9982;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 77718265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77718338 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9234;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77718382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.951;LDAF=0.2023;AVGPOST=0.9932;RSQ=0.9849;ERATE=0.0004;THETA=0.0003;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 77718383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.965;LDAF=0.8222;AVGPOST=0.9954;RSQ=0.9873;ERATE=0.0005;THETA=0.0002;AC=1798;AN=2184 GT:DS:GL:BD 0.82326007 1
1 77718563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0118;AVGPOST=0.9990;RSQ=0.9693;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77718592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77718705 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.962;LDAF=0.0748;AVGPOST=0.9908;RSQ=0.9525;ERATE=0.0016;THETA=0.0003;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 77718710 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9847;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77718720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1178;AVGPOST=0.9992;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 77718765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6442;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77718785 . GA G 1571 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77718815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77718875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77718917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8287;AVGPOST=0.9986;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=1809;AN=2184 GT:DS:GL:BD 0.82829672 1
1 77718960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77719007 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8232;AVGPOST=0.9970;RSQ=0.9925;ERATE=0.0003;THETA=0.0006;AC=1799;AN=2184 GT:DS:GL:BD 0.82371795 1
1 77719114 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6388;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77719148 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77719173 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77719206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77719284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0118;AVGPOST=0.9989;RSQ=0.9656;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77719587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77719724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6332;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77719729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2125;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 77719790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77719878 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3570;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 77719879 . TGTG T 240 PASS INDEL;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9124;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77720010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0031;AVGPOST=0.9966;RSQ=0.6336;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77720111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8463;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77720301 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9985;RSQ=0.9600;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77720310 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77720433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.7868;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77720456 . AAAATT A 803 PASS INDEL;BAVGPOST=0.996;BRSQ=0.764;LDAF=0.0081;AVGPOST=0.9949;RSQ=0.8151;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77720489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5953;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77720505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9733;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77720518 . ACT A 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5515;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77720577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4960;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77720596 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6311;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77720660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9835;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77720669 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1053;AVGPOST=0.9991;RSQ=0.9963;ERATE=0.0004;THETA=0.0001;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 77720685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6189;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77720782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8270;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77720844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2529;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 77720875 . TA T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4366;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77720931 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0040;AVGPOST=0.9974;RSQ=0.7451;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77720949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0158;AVGPOST=0.9976;RSQ=0.9437;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77720960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6825;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77721005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8233;AVGPOST=0.9972;RSQ=0.9915;ERATE=0.0005;THETA=0.0003;AC=1798;AN=2184 GT:DS:GL:BD 0.82326007 1
1 77721292 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77721406 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77721844 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4688;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77721940 rs113939583 TG T 1731 PASS INDEL;BAVGPOST=0.879;BRSQ=0.622;LDAF=0.1914;AVGPOST=0.8732;RSQ=0.6984;ERATE=0.0162;THETA=0.0006;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 77721941 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.934;LDAF=0.3031;AVGPOST=0.9649;RSQ=0.9405;ERATE=0.0039;THETA=0.0002;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 77721943 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.939;LDAF=0.2976;AVGPOST=0.9686;RSQ=0.9467;ERATE=0.0016;THETA=0.0002;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 77721960 . TG T 19382 PASS INDEL;BAVGPOST=0.874;BRSQ=0.791;LDAF=0.5060;AVGPOST=0.8287;RSQ=0.7468;ERATE=0.0447;THETA=0.0003;AC=1120;AN=2184 GT:DS:GL:BD 0.51282054 1
1 77722037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7460;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77722044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3259;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 77722120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6015;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77722476 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5617;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77722482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2436;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0017;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 77722527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77722552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0167;AVGPOST=0.9995;RSQ=0.9880;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77722602 rs75765838 TG T 25054 PASS INDEL;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1816;AVGPOST=0.9981;RSQ=0.9951;ERATE=0.0008;THETA=0.0004;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 77722613 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0156;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77722748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0108;AVGPOST=0.9989;RSQ=0.9642;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77722851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9042;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77722874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77722900 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5643;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77722993 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77723001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77723057 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9766;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77723238 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8369;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77723272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8628;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77723284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3245;AVGPOST=0.9951;RSQ=0.9916;ERATE=0.0005;THETA=0.0002;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 77723307 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0085;AVGPOST=0.9992;RSQ=0.9559;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77723428 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9305;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77723434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.686;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8628;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77723486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77723630 . AT A 633 PASS INDEL;BAVGPOST=0.996;BRSQ=0.870;LDAF=0.0178;AVGPOST=0.9879;RSQ=0.7244;ERATE=0.0014;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77723725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3298;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0007;THETA=0.0002;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 77723768 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77723888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0070;AVGPOST=0.9981;RSQ=0.9079;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77723894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0069;AVGPOST=0.9982;RSQ=0.9136;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77723924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2319;AVGPOST=0.9973;RSQ=0.9941;ERATE=0.0004;THETA=0.0003;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 77724042 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8058;AVGPOST=0.9971;RSQ=0.9924;ERATE=0.0003;THETA=0.0006;AC=1759;AN=2184 GT:DS:GL:BD 0.80540293 1
1 77724075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0088;AVGPOST=0.9991;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77724113 . T TA 180 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8377;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77724382 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6487;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77724402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8247;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77724500 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77724547 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77724637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8767;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77724664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77724668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7183;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77724736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77724782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6745;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77724820 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.8090;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77724941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0164;AVGPOST=0.9992;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77724967 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0092;AVGPOST=0.9975;RSQ=0.9031;ERATE=0.0003;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77724999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77725031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77725120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1052;AVGPOST=0.9993;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 77725276 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77725373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6297;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77725391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0212;AVGPOST=0.9996;RSQ=0.9923;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77725449 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77725592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9988;RSQ=0.9784;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77725614 . AG A 830 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0003;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77726109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0688;AVGPOST=0.9988;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 77726165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5633;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77726188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9031;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77726241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2327;AVGPOST=0.9979;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 77726367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77726374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7873;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77726412 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77726438 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7153;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0005;THETA=0.0003;AC=1562;AN=2184 GT:DS:GL:BD 0.71520144 1
1 77726493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5104;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77726517 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7058;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77726686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1174;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 77726798 . C CA 26 PASS INDEL;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0035;AVGPOST=0.9952;RSQ=0.4829;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77726884 . GT G 46 PASS INDEL;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0053;AVGPOST=0.9941;RSQ=0.5760;ERATE=0.0008;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77726980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1176;AVGPOST=0.9981;RSQ=0.9922;ERATE=0.0004;THETA=0.0004;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 77727060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7250;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77727137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0084;AVGPOST=0.9973;RSQ=0.8875;ERATE=0.0004;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77727161 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9713;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77727202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7565;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77727283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0031;AVGPOST=0.9964;RSQ=0.5810;ERATE=0.0006;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77727403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77727460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0076;AVGPOST=0.9969;RSQ=0.8535;ERATE=0.0004;THETA=0.0029;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77727569 . T TC 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5524;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77727696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9459;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77727703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6309;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77727712 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9983;RSQ=0.9006;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77727739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7900;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77727898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7170;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0056;AC=1566;AN=2184 GT:DS:GL:BD 0.71703297 1
1 77727997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77728390 . C CCATTGCT 439 PASS INDEL;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.7933;ERATE=0.0005;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77728454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0084;AVGPOST=0.9985;RSQ=0.9298;ERATE=0.0004;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77728541 . C CT 1124 PASS INDEL;BAVGPOST=0.839;BRSQ=0.462;LDAF=0.2285;AVGPOST=0.7914;RSQ=0.5383;ERATE=0.0133;THETA=0.0004;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 77728542 . CT C 1000 PASS INDEL;BAVGPOST=0.642;BRSQ=0.235;LDAF=0.6912;AVGPOST=0.7083;RSQ=0.4251;ERATE=0.0293;THETA=0.0004;AC=1641;AN=2184 GT:DS:GL:BD 0.75137365 1
1 77728547 . T TTTCCC 9930 PASS INDEL;BAVGPOST=0.814;BRSQ=0.501;LDAF=0.7271;AVGPOST=0.8239;RSQ=0.6435;ERATE=0.0102;THETA=0.0003;AC=1640;AN=2184 GT:DS:GL:BD 0.75091577 1
1 77728656 . C CT 81 PASS INDEL;BAVGPOST=0.801;BRSQ=0.053;LDAF=0.2420;AVGPOST=0.6764;RSQ=0.2664;ERATE=0.0224;THETA=0.0026;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 77728720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.888;LDAF=0.1644;AVGPOST=0.9846;RSQ=0.9586;ERATE=0.0006;THETA=0.0001;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 77728775 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.5839;AVGPOST=0.9908;RSQ=0.9870;ERATE=0.0006;THETA=0.0003;AC=1273;AN=2184 GT:DS:GL:BD 0.58287543 1
1 77728969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.904;LDAF=0.0387;AVGPOST=0.9956;RSQ=0.9588;ERATE=0.0003;THETA=0.0049;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 77729022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5423;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77729084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0157;AVGPOST=0.9996;RSQ=0.9885;ERATE=0.0003;THETA=0.0027;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77729105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77729184 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77729293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9789;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77729418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77729444 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77729590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77729595 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8835;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77729629 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6160;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77729644 . C CG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77729648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77729669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3662;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0004;THETA=0.0005;AC=801;AN=2184 GT:DS:GL:BD 0.36675823 0
1 77729746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7124;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77729805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.7825;AVGPOST=0.9979;RSQ=0.9948;ERATE=0.0005;THETA=0.0027;AC=1709;AN=2184 GT:DS:GL:BD 0.78250915 1
1 77729990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5922;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77730093 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0215;AVGPOST=0.9989;RSQ=0.9807;ERATE=0.0004;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77730150 . TG T 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4134;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77730342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6677;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77730364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9674;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77730398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0766;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0004;THETA=0.0006;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 77730437 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0758;AVGPOST=0.9983;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 77730546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0121;AVGPOST=0.9977;RSQ=0.9382;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77730587 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5678;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77730812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77730966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0765;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0009;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 77731019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.9040;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77731031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9875;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77731097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77731184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7701;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77731277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0765;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 77731287 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1702;AVGPOST=0.9978;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 77731404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6458;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77731415 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77731501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9195;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77731589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7827;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77731611 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77731637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9997;RSQ=0.9884;ERATE=0.0003;THETA=0.0026;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77731802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9916;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77731867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77731889 . AG A 540 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0062;AVGPOST=0.9977;RSQ=0.8624;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77731893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0146;AVGPOST=0.9999;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77731996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0116;AVGPOST=0.9988;RSQ=0.9551;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77732270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77732279 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8050;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77732315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77732446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9508;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77732565 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0265;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0004;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 77732741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77732808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9385;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77732927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77732963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77733024 rs4033038 ACTT A 94969 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7979;AVGPOST=0.9953;RSQ=0.9891;ERATE=0.0009;THETA=0.0002;AC=1746;AN=2184 GT:DS:GL:BD 0.79945058 1
1 77733097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7101;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77733120 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1274;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 77733191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77733234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9465;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77733339 . G GC 723 PASS INDEL;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8504;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77733347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7828;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77733420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1083;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77733503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77733504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0243;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77733530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0763;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0001;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 77733540 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6808;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0005;THETA=0.0008;AC=1488;AN=2184 GT:DS:GL:BD 0.68131870 1
1 77733555 rs111738747 TC T 2461 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9798;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77733577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77733685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7574;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=1654;AN=2184 GT:DS:GL:BD 0.75732601 1
1 77733781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4488;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77733798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0767;AVGPOST=0.9985;RSQ=0.9936;ERATE=0.0004;THETA=0.0002;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 77733801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9996;RSQ=0.9927;ERATE=0.0003;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77733813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.771;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8759;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77733840 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.0265;AVGPOST=0.9978;RSQ=0.9653;ERATE=0.0004;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 77733862 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9176;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77733924 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77734095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7663;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77734548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6836;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77734562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3592;AVGPOST=0.9972;RSQ=0.9950;ERATE=0.0006;THETA=0.0003;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 77734570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77734599 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77734634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0770;AVGPOST=0.9983;RSQ=0.9907;ERATE=0.0005;THETA=0.0008;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 77734652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7478;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77734786 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0054;AVGPOST=0.9957;RSQ=0.7321;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77734875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0068;AVGPOST=0.9989;RSQ=0.9275;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77734944 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.7042;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77734968 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77735233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9996;RSQ=0.9854;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77735280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7794;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77735326 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8208;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77735392 rs77586069 C CAA 24978 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0963;AVGPOST=0.9962;RSQ=0.9878;ERATE=0.0004;THETA=0.0004;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 77735470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5584;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77735510 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77735723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77735862 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6245;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77735877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77735943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0047;AVGPOST=0.9983;RSQ=0.8525;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77736039 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5990;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77736122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0133;AVGPOST=0.9905;RSQ=0.7211;ERATE=0.0012;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77736131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.904;LDAF=0.0895;AVGPOST=0.9814;RSQ=0.9167;ERATE=0.0014;THETA=0.0003;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77736190 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.951;LDAF=0.0999;AVGPOST=0.9900;RSQ=0.9579;ERATE=0.0010;THETA=0.0001;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 77736266 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0088;AVGPOST=0.9960;RSQ=0.7966;ERATE=0.0007;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77736280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5369;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77736324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.949;LDAF=0.1746;AVGPOST=0.9850;RSQ=0.9603;ERATE=0.0029;THETA=0.0002;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 77736353 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4516;AVGPOST=0.9947;RSQ=0.9914;ERATE=0.0011;THETA=0.0002;AC=986;AN=2184 GT:DS:GL:BD 0.45146519 0
1 77736375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77736396 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77736430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77736485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8625;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77736509 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1699;AVGPOST=0.9992;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 77736510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77736662 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0957;AVGPOST=0.9991;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 77736680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0188;AVGPOST=0.9993;RSQ=0.9858;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77736866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1698;AVGPOST=0.9985;RSQ=0.9956;ERATE=0.0004;THETA=0.0008;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 77736974 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0798;AVGPOST=0.9985;RSQ=0.9913;ERATE=0.0005;THETA=0.0003;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 77737026 . T TA 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77737217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7807;AVGPOST=0.9987;RSQ=0.9966;ERATE=0.0005;THETA=0.0005;AC=1706;AN=2184 GT:DS:GL:BD 0.78113556 1
1 77737275 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6492;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77737326 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0001;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 77737515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8875;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77737572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0066;AVGPOST=0.9987;RSQ=0.9229;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77737645 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0145;AVGPOST=0.9990;RSQ=0.9797;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77737655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77738148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77738157 . TAAC T 3130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0187;AVGPOST=0.9992;RSQ=0.9826;ERATE=0.0003;THETA=0.0020;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77738199 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1416;AVGPOST=0.9979;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 77738214 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9455;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77738382 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0796;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0004;THETA=0.0007;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 77738506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5021;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77738569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.5818;ERATE=0.0012;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77738640 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7830;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77738678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7332;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77738731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5552;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77738736 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6368;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77738757 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1109;AVGPOST=0.9990;RSQ=0.9957;ERATE=0.0004;THETA=0.0006;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 77738898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0325;AVGPOST=0.9990;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 77738916 . A AG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0021;AVGPOST=0.9970;RSQ=0.4379;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77738965 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0750;AVGPOST=0.9984;RSQ=0.9905;ERATE=0.0005;THETA=0.0005;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 77739023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77739131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8678;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77739226 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5867;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77739289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77739328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4835;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77739347 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77739381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0167;AVGPOST=0.9989;RSQ=0.9723;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77739624 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77739822 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0948;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 77739861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8284;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77739943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9880;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77740004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77740005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5798;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77740106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77740127 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77740128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7858;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77740159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77740181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0229;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 77740454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7681;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77740557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77740703 . TGAGCATAA T 392 PASS INDEL;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7422;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77740758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0748;AVGPOST=0.9992;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 77740779 . GC G 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.3896;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77740787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1591;AVGPOST=0.9991;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 77740836 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1331;AVGPOST=0.9965;RSQ=0.9880;ERATE=0.0005;THETA=0.0003;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 77741216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7320;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77741271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5450;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77741331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8930;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77741467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77741605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0331;AVGPOST=0.9997;RSQ=0.9955;ERATE=0.0004;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 77741619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0161;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77741664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77741683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.9044;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77741741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9307;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77741794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1275;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 77742081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4731;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77742170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0325;AVGPOST=0.9988;RSQ=0.9856;ERATE=0.0003;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 77742433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9200;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77742445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8542;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77742469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0081;AVGPOST=0.9988;RSQ=0.9394;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77742481 . T TG 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7625;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77742707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0079;AVGPOST=0.9974;RSQ=0.8685;ERATE=0.0004;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77742882 . T TG 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.4780;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77743002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9110;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77743090 . TCTG T 31 PASS INDEL;BAVGPOST=0.998;BRSQ=0.722;LDAF=0.0060;AVGPOST=0.9939;RSQ=0.5802;ERATE=0.0022;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77743216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0277;AVGPOST=0.9983;RSQ=0.9745;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 77743222 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77743361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0325;AVGPOST=0.9985;RSQ=0.9845;ERATE=0.0003;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 77743484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7720;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77743591 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7597;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77743642 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77743712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0150;AVGPOST=0.9973;RSQ=0.9316;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77743713 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8319;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77743793 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77743802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8982;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77743889 rs76123030 T TCACAA 31620 PASS INDEL;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0946;AVGPOST=0.9984;RSQ=0.9933;ERATE=0.0004;THETA=0.0002;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 77744051 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8853;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77744078 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77744156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6935;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77744191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77744320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6142;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77744421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0751;AVGPOST=0.9982;RSQ=0.9904;ERATE=0.0003;THETA=0.0005;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 77744422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7402;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77744442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0069;AVGPOST=0.9978;RSQ=0.8784;ERATE=0.0005;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77744590 . AT A 8144 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0704;AVGPOST=0.9978;RSQ=0.9871;ERATE=0.0004;THETA=0.0011;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 77744595 . CT C 41 PASS INDEL;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6981;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77744596 . TC T 41 PASS INDEL;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0035;AVGPOST=0.9963;RSQ=0.6183;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77744597 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77744898 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0113;AVGPOST=0.9971;RSQ=0.9054;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77745031 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.440;LDAF=0.0263;AVGPOST=0.9680;RSQ=0.5425;ERATE=0.0013;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77745115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9608;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77745161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7440;ERATE=0.0006;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77745215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77745321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.574;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6828;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77745372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8233;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77745504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0174;AVGPOST=0.9983;RSQ=0.9692;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77745532 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8192;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77745639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0184;AVGPOST=0.9993;RSQ=0.9866;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77745717 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77745826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77745964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0026;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77746220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4807;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77746245 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0744;AVGPOST=0.9991;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 77746265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0198;AVGPOST=0.9997;RSQ=0.9940;ERATE=0.0003;THETA=0.0011;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77746521 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4988;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0003;THETA=0.0014;AC=1090;AN=2184 GT:DS:GL:BD 0.49908423 0
1 77746549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8693;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77746551 . G GT 313 PASS INDEL;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9354;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77746578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6524;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77746604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6265;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77746629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6411;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77746685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8502;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77746700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77746787 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0980;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0031;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 77746947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6365;ERATE=0.0003;THETA=0.0112;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77746967 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0078;AVGPOST=0.9991;RSQ=0.9498;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77747248 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1532;AVGPOST=0.9982;RSQ=0.9947;ERATE=0.0003;THETA=0.0023;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 77747600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.244;LDAF=0.0269;AVGPOST=0.9645;RSQ=0.4771;ERATE=0.0020;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77747606 . GGCGCGGA G 1314 PASS INDEL;BAVGPOST=0.968;BRSQ=0.720;LDAF=0.0849;AVGPOST=0.9174;RSQ=0.6074;ERATE=0.0063;THETA=0.0020;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 77747643 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.670;LDAF=0.0534;AVGPOST=0.9493;RSQ=0.6280;ERATE=0.0022;THETA=0.0029;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 77747667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.345;LDAF=0.0137;AVGPOST=0.9805;RSQ=0.4226;ERATE=0.0012;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77747738 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.934;LDAF=0.2075;AVGPOST=0.9524;RSQ=0.9002;ERATE=0.0025;THETA=0.0008;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 77747825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.501;LDAF=0.0058;AVGPOST=0.9952;RSQ=0.6320;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77747903 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.4917;ERATE=0.0010;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77747982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0254;AVGPOST=0.9995;RSQ=0.9911;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 77748109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77748116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77748241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0141;AVGPOST=0.9983;RSQ=0.9552;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77748387 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7340;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77748388 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5783;ERATE=0.0005;THETA=0.0073;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77748477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8699;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77748502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6427;ERATE=0.0004;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77748658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0197;AVGPOST=0.9977;RSQ=0.9466;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77748664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5411;AVGPOST=0.9943;RSQ=0.9907;ERATE=0.0008;THETA=0.0006;AC=1181;AN=2184 GT:DS:GL:BD 0.54075092 1
1 77748703 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7056;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77748783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.4866;ERATE=0.0010;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77748786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5759;AVGPOST=0.9859;RSQ=0.9783;ERATE=0.0016;THETA=0.0005;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 77748842 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0260;AVGPOST=0.9996;RSQ=0.9930;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 77748871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6327;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77748979 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9358;ERATE=0.0003;THETA=0.0041;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77749111 . AG A 450 PASS INDEL;BAVGPOST=0.823;BRSQ=0.395;LDAF=0.1114;AVGPOST=0.9275;RSQ=0.7657;ERATE=0.0011;THETA=0.0004;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 77749114 rs79754897 GT G 13680 PASS INDEL;BAVGPOST=0.992;BRSQ=0.973;LDAF=0.1389;AVGPOST=0.9928;RSQ=0.9803;ERATE=0.0005;THETA=0.0032;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 77749119 . TC T 575 PASS INDEL;BAVGPOST=0.953;BRSQ=0.755;LDAF=0.0811;AVGPOST=0.9545;RSQ=0.8200;ERATE=0.0004;THETA=0.0009;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 77749322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1253;AVGPOST=0.9983;RSQ=0.9940;ERATE=0.0004;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 77749363 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2711;AVGPOST=0.9981;RSQ=0.9957;ERATE=0.0005;THETA=0.0003;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 77749428 . G GT 555 PASS INDEL;BAVGPOST=0.977;BRSQ=0.637;LDAF=0.0431;AVGPOST=0.9615;RSQ=0.6572;ERATE=0.0052;THETA=0.0007;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 77749436 . TG T 1359 PASS INDEL;BAVGPOST=0.972;BRSQ=0.851;LDAF=0.1100;AVGPOST=0.9799;RSQ=0.9272;ERATE=0.0008;THETA=0.0005;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 77749437 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.926;LDAF=0.1300;AVGPOST=0.9676;RSQ=0.8988;ERATE=0.0063;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 77749480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1251;AVGPOST=0.9977;RSQ=0.9928;ERATE=0.0003;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77749527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5293;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0006;THETA=0.0002;AC=1157;AN=2184 GT:DS:GL:BD 0.52976191 1
1 77749552 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1252;AVGPOST=0.9983;RSQ=0.9942;ERATE=0.0004;THETA=0.0005;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 77749637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5691;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77749698 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77749836 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1257;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 77750003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0202;AVGPOST=0.9980;RSQ=0.9549;ERATE=0.0005;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77750016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77750029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5141;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77750048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9989;RSQ=0.9771;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77750051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1065;AVGPOST=0.9989;RSQ=0.9951;ERATE=0.0004;THETA=0.0002;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 77750066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0054;AVGPOST=0.9989;RSQ=0.9130;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77750111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77750130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0601;AVGPOST=0.9962;RSQ=0.9764;ERATE=0.0006;THETA=0.0002;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 77750227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8774;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77750317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4807;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77750339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8385;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77750372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5605;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77750444 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8610;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77750488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77750492 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1263;AVGPOST=0.9987;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 77750517 . AT A 4 PASS INDEL;BAVGPOST=0.999;BRSQ=0.543;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6203;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77750601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7974;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77750637 rs67046166 TA T 12180 PASS INDEL;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1306;AVGPOST=0.9976;RSQ=0.9910;ERATE=0.0005;THETA=0.0005;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 77750687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1310;AVGPOST=0.9984;RSQ=0.9943;ERATE=0.0004;THETA=0.0002;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 77750699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1069;AVGPOST=0.9991;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 77750877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.859;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9254;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77750925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8037;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77750942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1308;AVGPOST=0.9994;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 77750982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7889;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77751030 rs56407013 A AT 513 PASS INDEL;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0162;AVGPOST=0.9957;RSQ=0.8995;ERATE=0.0004;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77751131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77751148 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1253;AVGPOST=0.9991;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77751193 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3262;AVGPOST=0.9975;RSQ=0.9954;ERATE=0.0006;THETA=0.0003;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 77751273 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77751326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9195;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77751459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.900;LDAF=0.0242;AVGPOST=0.9968;RSQ=0.9477;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 77751508 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1253;AVGPOST=0.9994;RSQ=0.9974;ERATE=0.0003;THETA=0.0015;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77751557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0024;AVGPOST=0.9963;RSQ=0.4232;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77751607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5839;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77751671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9228;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77751738 . CAGA C 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7079;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77751856 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1249;AVGPOST=0.9987;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77751903 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4222;AVGPOST=0.9963;RSQ=0.9938;ERATE=0.0008;THETA=0.0005;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 77751950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1258;AVGPOST=0.9991;RSQ=0.9965;ERATE=0.0003;THETA=0.0016;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 77752025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5379;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77752035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8731;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77752093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1265;AVGPOST=0.9981;RSQ=0.9941;ERATE=0.0003;THETA=0.0007;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 77752097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77752107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77752312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.3809;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77752319 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.971;LDAF=0.1232;AVGPOST=0.9939;RSQ=0.9805;ERATE=0.0005;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 77752321 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.971;LDAF=0.1235;AVGPOST=0.9960;RSQ=0.9866;ERATE=0.0003;THETA=0.0003;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 77752492 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9443;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77752536 . AAATT A 1408 PASS INDEL;BAVGPOST=0.974;BRSQ=0.857;LDAF=0.0987;AVGPOST=0.9756;RSQ=0.9030;ERATE=0.0012;THETA=0.0002;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 77752543 . TTAA T 206 PASS INDEL;BAVGPOST=0.949;BRSQ=0.634;LDAF=0.0772;AVGPOST=0.9704;RSQ=0.8528;ERATE=0.0008;THETA=0.0004;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 77752544 rs111637642 TAATTA T 9104 PASS INDEL;BAVGPOST=0.971;BRSQ=0.880;LDAF=0.1186;AVGPOST=0.9659;RSQ=0.8816;ERATE=0.0040;THETA=0.0001;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 77752549 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0513;AVGPOST=0.9980;RSQ=0.9846;ERATE=0.0004;THETA=0.0023;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 77752558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77752622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0311;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0003;THETA=0.0041;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 77752731 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77752797 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77752846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77752921 rs113213379 TG T 10311 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1255;AVGPOST=0.9993;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77752937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1253;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77752976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1253;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77752996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9856;AVGPOST=0.9995;RSQ=0.9858;ERATE=0.0003;THETA=0.0002;AC=2153;AN=2184 GT:DS:GL:BD 0.98580587 1
1 77753083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1254;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77753096 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6347;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77753122 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0896;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 77753235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9121;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77753271 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1253;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77753342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.9859;AVGPOST=0.9996;RSQ=0.9859;ERATE=0.0003;THETA=0.0003;AC=2153;AN=2184 GT:DS:GL:BD 0.98580587 1
1 77753437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1253;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77753448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8438;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77753482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0176;AVGPOST=0.9994;RSQ=0.9837;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77753517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1901;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 77753585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0260;AVGPOST=0.9989;RSQ=0.9828;ERATE=0.0004;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 77753658 rs67407100 AATAT A 23680 PASS INDEL;BAVGPOST=0.890;BRSQ=0.731;LDAF=0.2663;AVGPOST=0.8060;RSQ=0.6639;ERATE=0.0200;THETA=0.0017;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 77753763 rs113188458 AAC A 596 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.9086;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77753816 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77753856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6909;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77753873 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1246;AVGPOST=0.9986;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77753932 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6054;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77753970 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5405;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77753991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77754059 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9128;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77754327 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1334;AVGPOST=0.9981;RSQ=0.9938;ERATE=0.0004;THETA=0.0005;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 77754360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6604;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0004;THETA=0.0032;AC=1441;AN=2184 GT:DS:GL:BD 0.65979856 1
1 77754388 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6950;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77754394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0099;AVGPOST=0.9989;RSQ=0.9558;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77754443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5607;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77754540 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0248;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 77754620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0996;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 77754654 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5446;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77754676 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77754740 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6948;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77754853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4372;AVGPOST=0.9978;RSQ=0.9960;ERATE=0.0004;THETA=0.0002;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 77755019 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8622;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77755020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6181;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77755054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.9838;AVGPOST=0.9981;RSQ=0.9540;ERATE=0.0004;THETA=0.0005;AC=2149;AN=2184 GT:DS:GL:BD 0.98397434 1
1 77755057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0081;AVGPOST=0.9982;RSQ=0.9231;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77755107 . AATAC A 936 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0043;AVGPOST=0.9969;RSQ=0.6828;ERATE=0.0013;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77755152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0698;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77755221 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0174;AVGPOST=0.9995;RSQ=0.9872;ERATE=0.0003;THETA=0.0001;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77755442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.628;LDAF=0.0049;AVGPOST=0.9968;RSQ=0.7306;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77755480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1295;AVGPOST=0.9926;RSQ=0.9752;ERATE=0.0008;THETA=0.0008;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 77755686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1293;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0004;THETA=0.0001;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 77755824 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8823;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77755999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1281;AVGPOST=0.9979;RSQ=0.9921;ERATE=0.0005;THETA=0.0003;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 77756025 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.718;LDAF=0.0047;AVGPOST=0.9960;RSQ=0.6600;ERATE=0.0011;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77756044 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1241;AVGPOST=0.9980;RSQ=0.9926;ERATE=0.0003;THETA=0.0002;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 77756196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7822;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77756227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1238;AVGPOST=0.9979;RSQ=0.9931;ERATE=0.0004;THETA=0.0001;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 77756345 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0889;AVGPOST=0.9989;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 77756398 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8236;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77756532 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4044;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=883;AN=2184 GT:DS:GL:BD 0.40430403 0
1 77756638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8399;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77756705 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7231;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77756738 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77756925 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6174;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77757075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8911;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77757146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77757196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9128;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77757278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1244;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77757305 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0265;AVGPOST=0.9990;RSQ=0.9866;ERATE=0.0003;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 77757309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0001;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77757317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7719;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77757331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9854;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 77757358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3404;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 77757370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7828;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77757423 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0507;AVGPOST=0.9988;RSQ=0.9901;ERATE=0.0003;THETA=0.0002;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 77757424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1293;AVGPOST=0.9986;RSQ=0.9946;ERATE=0.0006;THETA=0.0003;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 77757504 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77757595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8151;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77757620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77757731 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77757812 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77757815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77757858 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77757924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.0996;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 77757966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6496;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77758064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0011;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77758080 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.8230;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77758129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77758182 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7296;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77758286 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8571;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77758357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4058;AVGPOST=0.9975;RSQ=0.9960;ERATE=0.0008;THETA=0.0002;AC=886;AN=2184 GT:DS:GL:BD 0.40567765 0
1 77758421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0179;AVGPOST=0.9966;RSQ=0.9350;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77758422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1327;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 77758499 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0261;AVGPOST=0.9994;RSQ=0.9895;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 77758535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6745;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77758539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.935;LDAF=0.0160;AVGPOST=0.9976;RSQ=0.9441;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77758605 . CAT C 240 PASS INDEL;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77758694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9866;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77758754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8209;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77758849 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77758943 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1242;AVGPOST=0.9986;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77758964 . T TTGAA 454 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7594;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77758976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0100;AVGPOST=0.9995;RSQ=0.9773;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77758982 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7772;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77759121 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4979;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77759254 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77759284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77759285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 77759380 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1293;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 77759539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77759578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1339;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0002;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 77759590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77759599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77759678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77759819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8629;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77759825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0303;AVGPOST=0.9997;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 77759849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77759856 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0139;AVGPOST=0.9987;RSQ=0.9580;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77759862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77759880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5664;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77759932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9929;ERATE=0.0003;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77759982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4119;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77760027 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4031;AVGPOST=0.9975;RSQ=0.9957;ERATE=0.0006;THETA=0.0004;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 77760081 . G GAC 41661 PASS INDEL;BAVGPOST=0.958;BRSQ=0.859;LDAF=0.7990;AVGPOST=0.9254;RSQ=0.8212;ERATE=0.0182;THETA=0.0005;AC=1776;AN=2184 GT:DS:GL:BD 0.81318682 1
1 77760082 rs35836390 A ACT 102067 PASS INDEL;BAVGPOST=0.984;BRSQ=0.944;LDAF=0.8452;AVGPOST=0.9834;RSQ=0.9497;ERATE=0.0034;THETA=0.0007;AC=1849;AN=2184 GT:DS:GL:BD 0.84661174 1
1 77760083 rs66805113 C CTA 21183 PASS INDEL;BAVGPOST=0.970;BRSQ=0.899;LDAF=0.8171;AVGPOST=0.9431;RSQ=0.8493;ERATE=0.0171;THETA=0.0002;AC=1808;AN=2184 GT:DS:GL:BD 0.82783884 1
1 77760243 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0175;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0003;THETA=0.0001;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77760287 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5070;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77760315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8350;ERATE=0.0003;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77760317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77760500 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4027;AVGPOST=0.9960;RSQ=0.9932;ERATE=0.0010;THETA=0.0004;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 77760538 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1247;AVGPOST=0.9985;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77760553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9956;RSQ=0.7955;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77760574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0032;AVGPOST=0.9948;RSQ=0.3316;ERATE=0.0010;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77760668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8361;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77760867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0263;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0003;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 77760885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9849;AVGPOST=0.9991;RSQ=0.9791;ERATE=0.0003;THETA=0.0002;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 77760886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9440;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77760935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77760962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0183;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77761005 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77761032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8614;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77761061 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6942;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77761174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7895;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77761175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1243;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0005;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77761309 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1262;AVGPOST=0.9981;RSQ=0.9936;ERATE=0.0004;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 77761336 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77761340 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0555;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 77761353 rs71832138 ATTCT A 44594 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3432;AVGPOST=0.9967;RSQ=0.9937;ERATE=0.0005;THETA=0.0007;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 77761376 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.947;LDAF=0.1187;AVGPOST=0.9926;RSQ=0.9733;ERATE=0.0003;THETA=0.0004;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 77761377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.947;LDAF=0.1198;AVGPOST=0.9917;RSQ=0.9710;ERATE=0.0003;THETA=0.0003;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 77761383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5873;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77761430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1244;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0004;THETA=0.0005;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77761464 . T TC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6532;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77761520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0058;AVGPOST=0.9966;RSQ=0.7864;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77761616 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3412;AVGPOST=0.9972;RSQ=0.9950;ERATE=0.0004;THETA=0.0005;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 77761655 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.793;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8149;ERATE=0.0005;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77761697 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7473;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77761730 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7089;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77761799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0169;AVGPOST=0.9959;RSQ=0.9095;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77761830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77761872 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1255;AVGPOST=0.9991;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77761956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0551;AVGPOST=0.9980;RSQ=0.9846;ERATE=0.0004;THETA=0.0007;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 77761993 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77762039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6323;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77762185 . A AT 4476 PASS INDEL;BAVGPOST=0.986;BRSQ=0.942;LDAF=0.1154;AVGPOST=0.9920;RSQ=0.9726;ERATE=0.0010;THETA=0.0002;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 77762186 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1298;AVGPOST=0.9918;RSQ=0.9716;ERATE=0.0009;THETA=0.0003;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 77762186 rs67967178 A AT 9985 PASS INDEL;BAVGPOST=0.628;BRSQ=0.256;LDAF=0.6493;AVGPOST=0.6633;RSQ=0.3931;ERATE=0.0540;THETA=0.0003;AC=1495;AN=2184 GT:DS:GL:BD 0.68452382 1
1 77762187 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.630;LDAF=0.9500;AVGPOST=0.9569;RSQ=0.6536;ERATE=0.0061;THETA=0.0003;AC=2100;AN=2184 GT:DS:GL:BD 0.96153843 1
1 77762512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8367;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77762526 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1247;AVGPOST=0.9986;RSQ=0.9947;ERATE=0.0004;THETA=0.0003;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77762590 . CAG C 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6330;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77762601 . C CT 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4922;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77762609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9688;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77762698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6323;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77762717 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1248;AVGPOST=0.9984;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77762753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0554;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 77762808 . TA T 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5567;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77762835 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9077;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77762855 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77762910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8987;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77762944 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77763065 . CT C 172 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8821;ERATE=0.0004;THETA=0.0036;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77763069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77763071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8538;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=1864;AN=2184 GT:DS:GL:BD 0.85347986 1
1 77763200 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77763221 . G GT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4440;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77763240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77763293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77763402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77763475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0141;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77763527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77763542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9854;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 77763560 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77763565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77763647 . T TTA 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77763769 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77763779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77763823 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77763846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0081;AVGPOST=0.9989;RSQ=0.9550;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77763983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8990;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77763990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8610;AVGPOST=0.9983;RSQ=0.9944;ERATE=0.0006;THETA=0.0004;AC=1882;AN=2184 GT:DS:GL:BD 0.86172163 1
1 77764044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8618;AVGPOST=0.9973;RSQ=0.9910;ERATE=0.0005;THETA=0.0014;AC=1882;AN=2184 GT:DS:GL:BD 0.86172163 1
1 77764090 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.7206;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77764111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5960;AVGPOST=0.9974;RSQ=0.9951;ERATE=0.0007;THETA=0.0002;AC=1301;AN=2184 GT:DS:GL:BD 0.59569597 1
1 77764194 . T TA 2324 PASS INDEL;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0559;AVGPOST=0.9973;RSQ=0.9769;ERATE=0.0008;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 77764213 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.4815;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77764218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1919;AVGPOST=0.9964;RSQ=0.9904;ERATE=0.0006;THETA=0.0004;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 77764249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8610;AVGPOST=0.9988;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=1882;AN=2184 GT:DS:GL:BD 0.86172163 1
1 77764314 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.961;LDAF=0.5902;AVGPOST=0.9784;RSQ=0.9661;ERATE=0.0032;THETA=0.0002;AC=1295;AN=2184 GT:DS:GL:BD 0.59294873 1
1 77764366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9848;AVGPOST=0.9988;RSQ=0.9652;ERATE=0.0004;THETA=0.0003;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 77764384 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.4021;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77764512 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8004;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77764545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8743;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77764587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77764591 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77764704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9870;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77764753 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9071;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77764869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1261;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 77764940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8709;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77764969 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6849;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77764994 . TACAGAC T 800 PASS INDEL;BAVGPOST=0.987;BRSQ=0.693;LDAF=0.0304;AVGPOST=0.9754;RSQ=0.6792;ERATE=0.0065;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 77765026 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.799;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9391;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77765046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0550;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 77765061 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77765208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6425;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77765240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77765465 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6060;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77765479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1497;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 77765500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7118;AVGPOST=0.9974;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=1555;AN=2184 GT:DS:GL:BD 0.71199632 1
1 77765527 rs34221500 A AT 10936 PASS INDEL;BAVGPOST=0.994;BRSQ=0.971;LDAF=0.1283;AVGPOST=0.9963;RSQ=0.9857;ERATE=0.0008;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 77765564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5396;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77765670 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77765697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77765786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9389;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77765794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8612;AVGPOST=0.9980;RSQ=0.9933;ERATE=0.0006;THETA=0.0001;AC=1882;AN=2184 GT:DS:GL:BD 0.86172163 1
1 77765858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8607;AVGPOST=0.9976;RSQ=0.9919;ERATE=0.0006;THETA=0.0002;AC=1881;AN=2184 GT:DS:GL:BD 0.86126375 1
1 77765883 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4082;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77765929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77765972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77765973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6925;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77765984 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77766012 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77766321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77766341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0552;AVGPOST=0.9989;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 77766352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77766490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77766518 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77766554 . TTA T 143 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77766656 . GCACATACA G 2962 PASS INDEL;BAVGPOST=0.997;BRSQ=0.845;LDAF=0.0107;AVGPOST=0.9977;RSQ=0.9195;ERATE=0.0003;THETA=0.0001;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77766682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.808;LDAF=0.0109;AVGPOST=0.9969;RSQ=0.8910;ERATE=0.0006;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77766709 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77766788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7745;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77766838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1239;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 77766847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2928;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0005;THETA=0.0003;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 77766885 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.888;LDAF=0.0067;AVGPOST=0.9978;RSQ=0.8651;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77767007 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77767056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6009;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77767102 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77767139 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.9128;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77767140 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8831;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77767253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6695;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77767258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5693;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77767298 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77767347 . TCTAGCTTTGA T 391 PASS INDEL;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0033;AVGPOST=0.9968;RSQ=0.6463;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77767409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77767413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7316;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77767432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77767513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77767523 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8611;AVGPOST=0.9987;RSQ=0.9959;ERATE=0.0004;THETA=0.0006;AC=1882;AN=2184 GT:DS:GL:BD 0.86172163 1
1 77767873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8616;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=1882;AN=2184 GT:DS:GL:BD 0.86172163 1
1 77767874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7698;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77767913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4890;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77767982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.8572;AVGPOST=0.9946;RSQ=0.9846;ERATE=0.0005;THETA=0.0009;AC=1877;AN=2184 GT:DS:GL:BD 0.85943222 1
1 77768016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7290;AVGPOST=0.9985;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=1592;AN=2184 GT:DS:GL:BD 0.72893775 1
1 77768024 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5968;AVGPOST=0.9975;RSQ=0.9954;ERATE=0.0005;THETA=0.0005;AC=1303;AN=2184 GT:DS:GL:BD 0.59661174 1
1 77768026 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0720;AVGPOST=0.9991;RSQ=0.9944;ERATE=0.0004;THETA=0.0003;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 77768060 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77768085 . GT G 327 PASS INDEL;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8847;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77768124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1239;AVGPOST=0.9987;RSQ=0.9948;ERATE=0.0005;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 77768125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77768151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9328;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77768351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6589;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77768429 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0023;AVGPOST=0.9971;RSQ=0.5320;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77768477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7085;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77768510 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0642;AVGPOST=0.9978;RSQ=0.9883;ERATE=0.0003;THETA=0.0005;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 77768537 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0061;AVGPOST=0.9991;RSQ=0.9509;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77768605 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0505;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 77768636 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5687;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77768681 rs112283457 G GT 4950 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0320;AVGPOST=0.9978;RSQ=0.9759;ERATE=0.0003;THETA=0.0002;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 77768750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77768778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3445;AVGPOST=0.9968;RSQ=0.9942;ERATE=0.0009;THETA=0.0003;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 77768810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0743;AVGPOST=0.9990;RSQ=0.9939;ERATE=0.0004;THETA=0.0003;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 77768845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9820;AVGPOST=0.9995;RSQ=0.9888;ERATE=0.0003;THETA=0.0003;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 77768855 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0087;AVGPOST=0.9988;RSQ=0.9504;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77769017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8237;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77769038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8588;AVGPOST=0.9955;RSQ=0.9852;ERATE=0.0010;THETA=0.0003;AC=1877;AN=2184 GT:DS:GL:BD 0.85943222 1
1 77769064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0512;AVGPOST=0.9981;RSQ=0.9872;ERATE=0.0003;THETA=0.0002;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 77769086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9844;AVGPOST=0.9981;RSQ=0.9482;ERATE=0.0004;THETA=0.0001;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 77769088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8767;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77769120 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8350;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77769267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0146;AVGPOST=0.9997;RSQ=0.9913;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77769275 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7769;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77769311 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8613;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=1882;AN=2184 GT:DS:GL:BD 0.86172163 1
1 77769384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1927;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 77769448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77769461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7220;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77769478 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8615;AVGPOST=0.9986;RSQ=0.9952;ERATE=0.0004;THETA=0.0005;AC=1882;AN=2184 GT:DS:GL:BD 0.86172163 1
1 77769490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1304;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 77769528 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1152;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 77769569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0035;AVGPOST=0.9967;RSQ=0.6529;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77769575 . G GTA 299 PASS INDEL;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0063;AVGPOST=0.9962;RSQ=0.7531;ERATE=0.0008;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77769833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0133;AVGPOST=0.9989;RSQ=0.9649;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77769843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0067;AVGPOST=0.9982;RSQ=0.9032;ERATE=0.0006;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77769859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9375;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77769870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8614;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=1882;AN=2184 GT:DS:GL:BD 0.86172163 1
1 77770173 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9827;AVGPOST=0.9959;RSQ=0.9039;ERATE=0.0006;THETA=0.0004;AC=2150;AN=2184 GT:DS:GL:BD 0.98443222 1
1 77770194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.707;LDAF=0.9816;AVGPOST=0.9947;RSQ=0.8779;ERATE=0.0006;THETA=0.0003;AC=2147;AN=2184 GT:DS:GL:BD 0.98305863 1
1 77770199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0184;AVGPOST=0.9987;RSQ=0.9657;ERATE=0.0006;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77770336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.5820;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77770386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77770405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7421;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77770478 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8308;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77770500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0997;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0005;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 77770584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5569;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77770875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9853;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 77770888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1283;AVGPOST=0.9984;RSQ=0.9943;ERATE=0.0005;THETA=0.0002;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 77770936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0512;AVGPOST=0.9988;RSQ=0.9903;ERATE=0.0003;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 77770967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1257;AVGPOST=0.9988;RSQ=0.9951;ERATE=0.0005;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 77771045 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0063;AVGPOST=0.9989;RSQ=0.9188;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77771057 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1315;AVGPOST=0.9982;RSQ=0.9932;ERATE=0.0005;THETA=0.0002;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 77771108 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5978;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0005;THETA=0.0003;AC=1306;AN=2184 GT:DS:GL:BD 0.59798533 1
1 77771242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8608;AVGPOST=0.9979;RSQ=0.9938;ERATE=0.0004;THETA=0.0004;AC=1881;AN=2184 GT:DS:GL:BD 0.86126375 1
1 77771549 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5137;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77771589 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0086;AVGPOST=0.9990;RSQ=0.9555;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77771627 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9705;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77771666 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.838;LDAF=0.9799;AVGPOST=0.9902;RSQ=0.8080;ERATE=0.0008;THETA=0.0005;AC=2148;AN=2184 GT:DS:GL:BD 0.98351645 1
1 77771774 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3426;AVGPOST=0.9970;RSQ=0.9947;ERATE=0.0007;THETA=0.0002;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 77771863 . TC T 680 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9746;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77772167 . A AG 57716 PASS INDEL;BAVGPOST=0.959;BRSQ=0.818;LDAF=0.8721;AVGPOST=0.9468;RSQ=0.8275;ERATE=0.0093;THETA=0.0002;AC=1924;AN=2184 GT:DS:GL:BD 0.88095236 1
1 77772216 . TTCA T 206 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5858;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77772254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1257;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 77772258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8728;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77772291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1305;AVGPOST=0.9994;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 77772352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6017;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77772419 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0091;AVGPOST=0.9980;RSQ=0.9278;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77772499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5989;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=1308;AN=2184 GT:DS:GL:BD 0.59890109 1
1 77772518 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0515;AVGPOST=0.9991;RSQ=0.9934;ERATE=0.0003;THETA=0.0002;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 77772576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.7799;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77772753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0155;AVGPOST=0.9980;RSQ=0.9551;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77772768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5393;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77772834 . A AT 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5505;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77772896 . T TG 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4379;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77772917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5484;ERATE=0.0008;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77772930 . TC T 1787 PASS INDEL;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0187;AVGPOST=0.9968;RSQ=0.9304;ERATE=0.0005;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77773099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9991;RSQ=0.9733;ERATE=0.0004;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77773138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.8612;AVGPOST=0.9984;RSQ=0.9942;ERATE=0.0006;THETA=0.0004;AC=1882;AN=2184 GT:DS:GL:BD 0.86172163 1
1 77773164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7722;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77773180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5160;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77773195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77773314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77773369 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1303;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0001;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 77773434 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77773476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9485;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77773478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77773553 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5846;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77773582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8616;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=1882;AN=2184 GT:DS:GL:BD 0.86172163 1
1 77773613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1253;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 77773679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8617;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0005;THETA=0.0006;AC=1882;AN=2184 GT:DS:GL:BD 0.86172163 1
1 77773829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77773901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0160;AVGPOST=0.9987;RSQ=0.9623;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77773943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77774015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0048;AVGPOST=0.9977;RSQ=0.8007;ERATE=0.0007;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77774037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8484;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77774061 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7483;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77774081 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9995;RSQ=0.9875;ERATE=0.0004;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77774086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.698;LDAF=0.0074;AVGPOST=0.9976;RSQ=0.8651;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77774140 . AAAAT A 32116 PASS INDEL;BAVGPOST=0.880;BRSQ=0.675;LDAF=0.6959;AVGPOST=0.8040;RSQ=0.6022;ERATE=0.0831;THETA=0.0002;AC=1608;AN=2184 GT:DS:GL:BD 0.73626375 1
1 77774142 rs60459659 AAT A 46025 PASS INDEL;BAVGPOST=0.959;BRSQ=0.864;LDAF=0.8265;AVGPOST=0.9203;RSQ=0.7928;ERATE=0.0187;THETA=0.0003;AC=1847;AN=2184 GT:DS:GL:BD 0.84569597 1
1 77774303 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77774413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0465;AVGPOST=0.9979;RSQ=0.9841;ERATE=0.0003;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 77774460 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8727;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77774503 MERGED_DEL_2_4043 AATTAGCTGGGTGTGATGACGTGTGCCTACAGTCCCAGCTACTCGGAAGGCTGAGGTGGGAAAATTGCTTGAGCCTGGGAGGCTGAGGCTGCAGTGAGCTGACATGGTGCCACTGTACTCCAGCCTAGCTGACAGAGTGAGACACTGTCTTAAAAAAAAAAAGACAACCGAGCACCACATGTTCTCACTT AGGAGGATGGAGGATAT . . SV;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0004;THETA=0.0034;CIEND=-66,87;CIPOS=-76,81;END=77781589;HOMLEN=0;HOMSEQ;SOURCE=BreakDancer_77774523_77781590,EMBLd GT:DS:GL:BD 0.00183150 0
1 77774532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8607;AVGPOST=0.9988;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=1881;AN=2184 GT:DS:GL:BD 0.86126375 1
1 77774773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1964;AVGPOST=0.9927;RSQ=0.9832;ERATE=0.0008;THETA=0.0002;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 77774774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1010;AVGPOST=0.9973;RSQ=0.9891;ERATE=0.0004;THETA=0.0005;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 77774874 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0052;AVGPOST=0.9993;RSQ=0.9356;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77774914 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.8606;AVGPOST=0.9986;RSQ=0.9950;ERATE=0.0004;THETA=0.0005;AC=1881;AN=2184 GT:DS:GL:BD 0.86126375 1
1 77774949 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6145;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77775000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0108;AVGPOST=0.9993;RSQ=0.9694;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77775014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8605;AVGPOST=0.9981;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=1881;AN=2184 GT:DS:GL:BD 0.86126375 1
1 77775066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1302;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 77775129 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77775233 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1306;AVGPOST=0.9957;RSQ=0.9847;ERATE=0.0005;THETA=0.0002;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 77775309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.792;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8706;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77775397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77775617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.5868;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77775647 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8570;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77775704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8610;AVGPOST=0.9990;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=1881;AN=2184 GT:DS:GL:BD 0.86126375 1
1 77775731 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1261;AVGPOST=0.9987;RSQ=0.9949;ERATE=0.0004;THETA=0.0004;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 77775787 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1249;AVGPOST=0.9986;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77775793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.8594;AVGPOST=0.9976;RSQ=0.9930;ERATE=0.0003;THETA=0.0002;AC=1877;AN=2184 GT:DS:GL:BD 0.85943222 1
1 77775853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2644;AVGPOST=0.9964;RSQ=0.9926;ERATE=0.0005;THETA=0.0011;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 77775884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.878;LDAF=0.0080;AVGPOST=0.9965;RSQ=0.8812;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77775899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77775914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0150;AVGPOST=0.9991;RSQ=0.9732;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77775953 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77775997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9852;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0005;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 77776045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1926;AVGPOST=0.9982;RSQ=0.9953;ERATE=0.0005;THETA=0.0002;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 77776062 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.861;LDAF=0.7910;AVGPOST=0.9213;RSQ=0.8213;ERATE=0.0287;THETA=0.0006;AC=1770;AN=2184 GT:DS:GL:BD 0.81043959 1
1 77776092 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1246;AVGPOST=0.9984;RSQ=0.9934;ERATE=0.0005;THETA=0.0002;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77776157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.857;LDAF=0.8085;AVGPOST=0.9227;RSQ=0.8175;ERATE=0.0087;THETA=0.0004;AC=1801;AN=2184 GT:DS:GL:BD 0.82463372 1
1 77776166 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.879;LDAF=0.8292;AVGPOST=0.9601;RSQ=0.8961;ERATE=0.0031;THETA=0.0006;AC=1835;AN=2184 GT:DS:GL:BD 0.84020144 1
1 77776177 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0058;AVGPOST=0.9936;RSQ=0.6169;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77776213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9447;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77776221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.967;LDAF=0.1260;AVGPOST=0.9972;RSQ=0.9883;ERATE=0.0008;THETA=0.0002;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 77776256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.924;LDAF=0.7089;AVGPOST=0.9650;RSQ=0.9326;ERATE=0.0029;THETA=0.0007;AC=1558;AN=2184 GT:DS:GL:BD 0.71336997 1
1 77776342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1249;AVGPOST=0.9965;RSQ=0.9864;ERATE=0.0007;THETA=0.0002;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77776368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.9862;AVGPOST=0.9976;RSQ=0.9226;ERATE=0.0005;THETA=0.0003;AC=2156;AN=2184 GT:DS:GL:BD 0.98717946 1
1 77776528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0828;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0009;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 77776646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77776713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77776890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.7331;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77776976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5447;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77777095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9850;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77777144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6052;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77777210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77777271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0526;AVGPOST=0.9964;RSQ=0.9777;ERATE=0.0003;THETA=0.0003;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 77777366 rs5775382 CT C 21637 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2546;AVGPOST=0.9967;RSQ=0.9927;ERATE=0.0007;THETA=0.0003;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 77777387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8186;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77777470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0720;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 77777719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6981;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77777731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8896;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77777750 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3772;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=824;AN=2184 GT:DS:GL:BD 0.37728938 0
1 77777784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77777834 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77777843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9853;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 77777898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0721;AVGPOST=0.9989;RSQ=0.9945;ERATE=0.0003;THETA=0.0002;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 77778038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0546;AVGPOST=0.9993;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 77778072 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0269;AVGPOST=0.9987;RSQ=0.9794;ERATE=0.0003;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 77778114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0073;AVGPOST=0.9984;RSQ=0.9193;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77778231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9990;RSQ=0.9597;ERATE=0.0004;THETA=0.0001;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77778287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1012;AVGPOST=0.9965;RSQ=0.9869;ERATE=0.0005;THETA=0.0002;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 77778330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0721;AVGPOST=0.9991;RSQ=0.9944;ERATE=0.0004;THETA=0.0003;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 77778349 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8927;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77778401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0086;AVGPOST=0.9991;RSQ=0.9569;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77778594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2934;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0003;THETA=0.0001;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 77778608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0503;AVGPOST=0.9994;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 77778694 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6407;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77778787 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9852;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0003;THETA=0.0003;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 77778816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5598;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77778875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77779009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77779016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9996;RSQ=0.9901;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77779049 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5198;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77779209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77779418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9849;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77779555 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7096;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77779561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77779605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0307;AVGPOST=0.9986;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 77779627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77779652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77779836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8558;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=1869;AN=2184 GT:DS:GL:BD 0.85576922 1
1 77779852 . GT G 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6217;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77779871 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1301;AVGPOST=0.9981;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 77779883 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0717;AVGPOST=0.9987;RSQ=0.9921;ERATE=0.0004;THETA=0.0013;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 77779942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9521;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77779967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0504;AVGPOST=0.9994;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 77779972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3779;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0005;THETA=0.0002;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 77780140 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.734;LDAF=0.0041;AVGPOST=0.9972;RSQ=0.7406;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77780241 . TG T 119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6018;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77780260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6550;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77780317 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7904;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77780475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6130;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77780513 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7161;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77780550 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.1917;AVGPOST=0.9976;RSQ=0.9939;ERATE=0.0003;THETA=0.0039;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 77780681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0081;AVGPOST=0.9995;RSQ=0.9763;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77780692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77780762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0719;AVGPOST=0.9994;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 77780849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0024;AVGPOST=0.9967;RSQ=0.4492;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77780917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7748;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77780940 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77780950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9564;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77781107 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1307;AVGPOST=0.9983;RSQ=0.9938;ERATE=0.0005;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 77781269 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6668;ERATE=0.0005;THETA=0.0056;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77781323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0122;AVGPOST=0.9990;RSQ=0.9607;ERATE=0.0005;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77781364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5334;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77781380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.7267;ERATE=0.0005;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77781400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77781403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5077;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77781567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3793;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0002;AC=828;AN=2184 GT:DS:GL:BD 0.37912089 0
1 77781584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5243;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77781675 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77781916 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77782303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0955;AVGPOST=0.9994;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 77782359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77782475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0090;AVGPOST=0.9972;RSQ=0.8845;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77782577 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7936;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77782582 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0258;AVGPOST=0.9975;RSQ=0.9700;ERATE=0.0003;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 77782637 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1242;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0003;THETA=0.0006;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77782702 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77782756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6401;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77782761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3780;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 77782845 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0115;AVGPOST=0.9991;RSQ=0.9694;ERATE=0.0003;THETA=0.0001;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77782999 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77783194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77783404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77783455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8633;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77783461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77783544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77783600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0691;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 77783708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.5732;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77783726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77783824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8788;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77783909 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6896;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=1507;AN=2184 GT:DS:GL:BD 0.69001830 1
1 77783914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8902;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77783916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77783937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8341;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77783951 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7719;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77784147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0073;AVGPOST=0.9992;RSQ=0.9515;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77784155 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77784259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5980;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77784328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5892;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77784366 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77784411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.631;LDAF=0.0283;AVGPOST=0.9700;RSQ=0.5986;ERATE=0.0094;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77784418 . TG T 280 PASS INDEL;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0047;AVGPOST=0.9972;RSQ=0.7672;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77784483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7546;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77784486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6762;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77784639 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.6626;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77784762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1839;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0004;THETA=0.0001;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 77784782 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77784872 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0083;AVGPOST=0.9992;RSQ=0.9623;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77784956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8385;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77784957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6736;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77785132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77785256 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9592;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77785275 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0037;AVGPOST=0.9968;RSQ=0.6956;ERATE=0.0005;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77785352 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6898;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=1507;AN=2184 GT:DS:GL:BD 0.69001830 1
1 77785381 . G GA 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5415;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77785520 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5794;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77785547 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77785561 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1843;AVGPOST=0.9990;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 77785595 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77785817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77785856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.958;LDAF=0.2160;AVGPOST=0.9937;RSQ=0.9858;ERATE=0.0009;THETA=0.0004;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 77785862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.950;LDAF=0.0779;AVGPOST=0.9958;RSQ=0.9787;ERATE=0.0003;THETA=0.0005;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 77785934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8754;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77785967 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77786005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1910;AVGPOST=0.9988;RSQ=0.9965;ERATE=0.0007;THETA=0.0003;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 77786030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0040;AVGPOST=0.9976;RSQ=0.7463;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77786081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6204;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77786115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0317;AVGPOST=0.9994;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 77786208 . T TG 100 PASS INDEL;BAVGPOST=0.993;BRSQ=0.668;LDAF=0.0183;AVGPOST=0.9805;RSQ=0.6002;ERATE=0.0028;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77786210 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.975;LDAF=0.3713;AVGPOST=0.9864;RSQ=0.9786;ERATE=0.0020;THETA=0.0003;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 77786253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1858;AVGPOST=0.9944;RSQ=0.9861;ERATE=0.0011;THETA=0.0004;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 77786288 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5820;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77786298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77786390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2899;AVGPOST=0.9910;RSQ=0.9831;ERATE=0.0019;THETA=0.0003;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 77786769 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77786802 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9512;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77786831 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1261;AVGPOST=0.9988;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 77786833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0097;AVGPOST=0.9995;RSQ=0.9767;ERATE=0.0003;THETA=0.0001;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77786878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.3944;ERATE=0.0005;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77786882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5952;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77786918 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9501;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77786930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1254;AVGPOST=0.9987;RSQ=0.9951;ERATE=0.0004;THETA=0.0005;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77787010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5281;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77787017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0041;AVGPOST=0.9958;RSQ=0.5945;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77787047 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8545;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77787052 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1247;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77787079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77787111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9992;RSQ=0.9678;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77787116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77787145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4498;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77787237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.1959;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 77787282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.750;LDAF=0.0041;AVGPOST=0.9993;RSQ=0.9282;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77787340 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0146;AVGPOST=0.9994;RSQ=0.9795;ERATE=0.0003;THETA=0.0016;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77787368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0955;AVGPOST=0.9984;RSQ=0.9927;ERATE=0.0005;THETA=0.0004;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 77787406 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6303;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77787423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0028;AVGPOST=0.9968;RSQ=0.5126;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77787506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8873;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77787683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3114;AVGPOST=0.9969;RSQ=0.9940;ERATE=0.0004;THETA=0.0002;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 77787686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0970;AVGPOST=0.9981;RSQ=0.9910;ERATE=0.0005;THETA=0.0002;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 77787706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77787788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5742;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77787878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7695;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77787947 rs66838057 TGG T 39179 PASS INDEL;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.3097;AVGPOST=0.9913;RSQ=0.9845;ERATE=0.0019;THETA=0.0002;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 77788003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9685;AVGPOST=0.9992;RSQ=0.9901;ERATE=0.0003;THETA=0.0002;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 77788129 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1047;AVGPOST=0.9979;RSQ=0.9912;ERATE=0.0004;THETA=0.0003;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 77788167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6939;ERATE=0.0010;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77788261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8566;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77788392 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77788396 . C CT 6921 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0521;AVGPOST=0.9983;RSQ=0.9855;ERATE=0.0006;THETA=0.0004;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 77788435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8365;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77788451 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77788462 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0893;AVGPOST=0.9991;RSQ=0.9957;ERATE=0.0005;THETA=0.0005;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 77788599 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6246;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77788703 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1237;AVGPOST=0.9986;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77788772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0038;AVGPOST=0.9941;RSQ=0.4652;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77788954 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77789186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0154;AVGPOST=0.9986;RSQ=0.9675;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77789204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0055;AVGPOST=0.9970;RSQ=0.7802;ERATE=0.0004;THETA=0.0031;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77789206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0061;AVGPOST=0.9983;RSQ=0.8740;ERATE=0.0005;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77789255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9438;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77789369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0894;AVGPOST=0.9986;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 77789381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3833;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77789397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7689;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77789417 . TATC T 124 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5076;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77789432 . AGT A 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77789473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5841;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77789493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9677;AVGPOST=0.9977;RSQ=0.9760;ERATE=0.0004;THETA=0.0006;AC=2114;AN=2184 GT:DS:GL:BD 0.96794873 1
1 77789503 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0186;AVGPOST=0.9993;RSQ=0.9844;ERATE=0.0003;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77789573 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.7232;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77789706 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0032;AVGPOST=0.9960;RSQ=0.5528;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77789835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77789865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9156;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77789993 rs4033034 T TCAC 93714 PASS INDEL;BAVGPOST=0.975;BRSQ=0.945;LDAF=0.7956;AVGPOST=0.9812;RSQ=0.9557;ERATE=0.0024;THETA=0.0004;AC=1750;AN=2184 GT:DS:GL:BD 0.80128205 1
1 77789995 . A ACCC 57525 PASS INDEL;BAVGPOST=0.929;BRSQ=0.830;LDAF=0.7245;AVGPOST=0.8910;RSQ=0.7851;ERATE=0.0354;THETA=0.0004;AC=1633;AN=2184 GT:DS:GL:BD 0.74771065 1
1 77789998 . A AC 5596 PASS INDEL;BAVGPOST=0.766;BRSQ=0.584;LDAF=0.5170;AVGPOST=0.7533;RSQ=0.5952;ERATE=0.0824;THETA=0.0006;AC=1201;AN=2184 GT:DS:GL:BD 0.54990840 1
1 77790276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6983;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77790442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9689;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 77790520 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77790705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5199;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77790849 . T TTG 1875 PASS INDEL;BAVGPOST=0.997;BRSQ=0.966;LDAF=0.0509;AVGPOST=0.9948;RSQ=0.9633;ERATE=0.0004;THETA=0.0005;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 77790850 . T TG 5578 PASS INDEL;BAVGPOST=0.996;BRSQ=0.959;LDAF=0.0520;AVGPOST=0.9929;RSQ=0.9506;ERATE=0.0005;THETA=0.0004;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 77790851 rs11428852 T TG 9007 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0694;AVGPOST=0.9987;RSQ=0.9915;ERATE=0.0005;THETA=0.0008;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 77790974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4193;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77791025 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1277;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 77791055 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7396;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77791320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7246;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77791392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4345;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0004;THETA=0.0002;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 77791420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.8157;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77791463 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.9739;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0003;THETA=0.0022;AC=2127;AN=2184 GT:DS:GL:BD 0.97390109 1
1 77791572 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0148;AVGPOST=0.9991;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77791645 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.6066;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77791649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.557;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5396;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77791655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5729;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77791689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1274;AVGPOST=0.9983;RSQ=0.9937;ERATE=0.0004;THETA=0.0005;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 77791872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77792016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8120;AVGPOST=0.9985;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=1772;AN=2184 GT:DS:GL:BD 0.81135529 1
1 77792370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.931;LDAF=0.1279;AVGPOST=0.9897;RSQ=0.9715;ERATE=0.0005;THETA=0.0002;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 77792564 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7263;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77792719 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77792895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9988;RSQ=0.9761;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77792918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0091;AVGPOST=0.9992;RSQ=0.9659;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77793153 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0111;AVGPOST=0.9991;RSQ=0.9707;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77793273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8814;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77793332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9859;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77793356 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77793820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0185;AVGPOST=0.9989;RSQ=0.9800;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77793924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77794035 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1302;AVGPOST=0.9907;RSQ=0.9686;ERATE=0.0009;THETA=0.0003;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 77794095 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0139;AVGPOST=0.9950;RSQ=0.8513;ERATE=0.0007;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77794116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.850;LDAF=0.0121;AVGPOST=0.9944;RSQ=0.8297;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77794140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9512;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77794144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.547;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5922;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77794252 rs78199595 AC A 2469 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0530;AVGPOST=0.9989;RSQ=0.9905;ERATE=0.0004;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 77794312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.8975;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77794358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0506;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 77794377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.6357;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77794558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7935;ERATE=0.0014;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77794571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5992;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77794572 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77794586 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.7938;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77794617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77794750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77795064 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3781;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0004;THETA=0.0007;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 77795124 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1984;AVGPOST=0.9963;RSQ=0.9913;ERATE=0.0005;THETA=0.0003;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 77795182 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77795250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7353;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77795290 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1275;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 77795314 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8850;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77795358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6057;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77795497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7286;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77795626 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9272;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77795669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9852;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77795687 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9996;RSQ=0.9883;ERATE=0.0004;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77795693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6661;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77795745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4917;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77795919 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0961;AVGPOST=0.9992;RSQ=0.9961;ERATE=0.0003;THETA=0.0001;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 77795972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7171;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77796137 rs77974445 TC T 19885 PASS INDEL;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1985;AVGPOST=0.9953;RSQ=0.9898;ERATE=0.0006;THETA=0.0003;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 77796153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0051;AVGPOST=0.9992;RSQ=0.9299;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77796340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0059;AVGPOST=0.9998;RSQ=0.9856;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77796363 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5584;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77796413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8127;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=1774;AN=2184 GT:DS:GL:BD 0.81227106 1
1 77796416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7178;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77796536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77796537 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5341;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77796780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.3250;ERATE=0.0005;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77796805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7234;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77797124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.4322;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77797137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0194;AVGPOST=0.9979;RSQ=0.9567;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77797245 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0496;AVGPOST=0.9995;RSQ=0.9947;ERATE=0.0004;THETA=0.0002;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 77797299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.842;LDAF=0.0262;AVGPOST=0.9929;RSQ=0.9036;ERATE=0.0005;THETA=0.0011;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 77797348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77797422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.837;LDAF=0.0278;AVGPOST=0.9916;RSQ=0.8876;ERATE=0.0003;THETA=0.0008;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 77797710 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1248;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0004;THETA=0.0001;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 77797816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3779;AVGPOST=0.9982;RSQ=0.9965;ERATE=0.0005;THETA=0.0003;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 77797887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5943;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77797916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4160;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77797951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3794;AVGPOST=0.9974;RSQ=0.9952;ERATE=0.0008;THETA=0.0002;AC=829;AN=2184 GT:DS:GL:BD 0.37957877 0
1 77798089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.964;LDAF=0.0589;AVGPOST=0.9935;RSQ=0.9585;ERATE=0.0005;THETA=0.0003;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 77798171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.5556;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77798252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.830;LDAF=0.0106;AVGPOST=0.9967;RSQ=0.8716;ERATE=0.0006;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77798285 . TTTGA T 40 PASS INDEL;BAVGPOST=0.992;BRSQ=0.488;LDAF=0.0178;AVGPOST=0.9782;RSQ=0.5069;ERATE=0.0034;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77798310 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0115;AVGPOST=0.9969;RSQ=0.8892;ERATE=0.0006;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77798409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.751;LDAF=0.0121;AVGPOST=0.9909;RSQ=0.7015;ERATE=0.0005;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77798486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9750;AVGPOST=0.9976;RSQ=0.9635;ERATE=0.0005;THETA=0.0003;AC=2130;AN=2184 GT:DS:GL:BD 0.97527474 1
1 77798494 . TA T 8519 PASS INDEL;BAVGPOST=0.974;BRSQ=0.875;LDAF=0.0814;AVGPOST=0.9826;RSQ=0.9217;ERATE=0.0005;THETA=0.0004;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 77798559 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7020;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77798626 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0117;AVGPOST=0.9983;RSQ=0.9441;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77798630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4825;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77798677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7132;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77798776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9779;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77798915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0531;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 77798923 . CT C 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7049;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77798945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1278;AVGPOST=0.9991;RSQ=0.9965;ERATE=0.0005;THETA=0.0001;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 77798972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0496;AVGPOST=0.9986;RSQ=0.9869;ERATE=0.0004;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 77799236 rs66483579 CA C 19388 PASS INDEL;BAVGPOST=0.786;BRSQ=0.660;LDAF=0.5533;AVGPOST=0.7768;RSQ=0.6783;ERATE=0.0416;THETA=0.0002;AC=1251;AN=2184 GT:DS:GL:BD 0.57280219 1
1 77799307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.971;LDAF=0.0963;AVGPOST=0.9990;RSQ=0.9954;ERATE=0.0004;THETA=0.0002;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 77799316 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1755;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 77799360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1254;AVGPOST=0.9979;RSQ=0.9918;ERATE=0.0006;THETA=0.0023;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77799423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8123;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77799559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1963;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0005;THETA=0.0004;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 77799631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9872;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77799636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.9740;AVGPOST=0.9989;RSQ=0.9846;ERATE=0.0003;THETA=0.0004;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 77799637 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7535;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77799952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7252;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77800005 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0493;AVGPOST=0.9990;RSQ=0.9908;ERATE=0.0003;THETA=0.0006;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 77800195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77800236 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9556;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=2087;AN=2184 GT:DS:GL:BD 0.95558608 1
1 77800247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6272;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77800279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77800324 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77800496 . T TG 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5845;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77800554 . A AT 2419 PASS INDEL;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0186;AVGPOST=0.9983;RSQ=0.9671;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77800739 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7072;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77800746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6340;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77800835 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2932;AVGPOST=0.9968;RSQ=0.9943;ERATE=0.0005;THETA=0.0003;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 77801008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5666;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77801066 rs34814131 TG T 8660 PASS INDEL;BAVGPOST=0.979;BRSQ=0.913;LDAF=0.1550;AVGPOST=0.9483;RSQ=0.8559;ERATE=0.0072;THETA=0.0005;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 77801135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6907;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77801215 . T TA 1315 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0117;AVGPOST=0.9984;RSQ=0.9478;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77801264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77801415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7492;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77801456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0191;AVGPOST=0.9969;RSQ=0.9410;ERATE=0.0004;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77801498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77801540 . TA T 14286 PASS INDEL;BAVGPOST=0.974;BRSQ=0.939;LDAF=0.2699;AVGPOST=0.9440;RSQ=0.8992;ERATE=0.0131;THETA=0.0023;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 77801542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.952;LDAF=0.7924;AVGPOST=0.9856;RSQ=0.9700;ERATE=0.0007;THETA=0.0003;AC=1737;AN=2184 GT:DS:GL:BD 0.79532969 1
1 77801543 rs35916064 G GA 16925 PASS INDEL;BAVGPOST=0.982;BRSQ=0.957;LDAF=0.2625;AVGPOST=0.9652;RSQ=0.9378;ERATE=0.0069;THETA=0.0005;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 77801580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77801614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7997;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77801672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6370;AVGPOST=0.9975;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=1390;AN=2184 GT:DS:GL:BD 0.63644689 1
1 77801696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1250;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77801707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7272;ERATE=0.0003;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77801986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1199;AVGPOST=0.9978;RSQ=0.9919;ERATE=0.0006;THETA=0.0002;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 77802017 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.781;LDAF=0.0156;AVGPOST=0.9905;RSQ=0.7747;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77802043 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0347;AVGPOST=0.9957;RSQ=0.9537;ERATE=0.0003;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 77802153 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.7927;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77802172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0070;AVGPOST=0.9986;RSQ=0.9161;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77802293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0512;AVGPOST=0.9992;RSQ=0.9943;ERATE=0.0004;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 77802310 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8483;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77802318 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0112;AVGPOST=0.9969;RSQ=0.8927;ERATE=0.0004;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77802376 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1274;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 77802503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0058;AVGPOST=0.9978;RSQ=0.8331;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77802698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0065;AVGPOST=0.9987;RSQ=0.9221;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77802867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6673;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77802930 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2561;AVGPOST=0.9977;RSQ=0.9954;ERATE=0.0004;THETA=0.0002;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 77802994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77803061 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0044;AVGPOST=0.9963;RSQ=0.6750;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77803129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1757;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 77803224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9393;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77803454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0509;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0001;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 77803525 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0508;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0007;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 77803561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0510;AVGPOST=0.9993;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 77803587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0119;AVGPOST=0.9983;RSQ=0.9537;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77803598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1755;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 77803650 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.587;LDAF=0.9043;AVGPOST=0.8951;RSQ=0.5488;ERATE=0.0215;THETA=0.0006;AC=2035;AN=2184 GT:DS:GL:BD 0.93177658 1
1 77803654 . T TC 5351 PASS INDEL;BAVGPOST=0.983;BRSQ=0.936;LDAF=0.1441;AVGPOST=0.9862;RSQ=0.9631;ERATE=0.0005;THETA=0.0002;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 77803655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.940;LDAF=0.1439;AVGPOST=0.9844;RSQ=0.9568;ERATE=0.0009;THETA=0.0003;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 77803719 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.953;LDAF=0.1763;AVGPOST=0.9959;RSQ=0.9879;ERATE=0.0008;THETA=0.0002;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 77803803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.927;LDAF=0.9606;AVGPOST=0.9917;RSQ=0.9247;ERATE=0.0006;THETA=0.0003;AC=2103;AN=2184 GT:DS:GL:BD 0.96291208 1
1 77803805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0073;AVGPOST=0.9970;RSQ=0.8490;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77803834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7610;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77803859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1245;AVGPOST=0.9988;RSQ=0.9953;ERATE=0.0003;THETA=0.0010;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77803936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6196;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77803949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0506;AVGPOST=0.9991;RSQ=0.9927;ERATE=0.0003;THETA=0.0002;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 77803957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77804120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4999;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77804175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5735;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77804216 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77804242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.976;LDAF=0.0867;AVGPOST=0.9954;RSQ=0.9788;ERATE=0.0003;THETA=0.0009;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77804334 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0536;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0001;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 77804340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0689;AVGPOST=0.9985;RSQ=0.9915;ERATE=0.0003;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 77804478 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1756;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 77804512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9323;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77804559 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0686;AVGPOST=0.9989;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 77804562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9555;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=2087;AN=2184 GT:DS:GL:BD 0.95558608 1
1 77804639 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4953;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77804650 rs59475314 C CA 3076 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0514;AVGPOST=0.9987;RSQ=0.9901;ERATE=0.0004;THETA=0.0001;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 77804742 rs34899933 G GA 17336 PASS INDEL;BAVGPOST=0.991;BRSQ=0.976;LDAF=0.2000;AVGPOST=0.9891;RSQ=0.9768;ERATE=0.0014;THETA=0.0003;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 77804807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7335;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77804926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5830;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77804952 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77805052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77805365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0152;AVGPOST=0.9977;RSQ=0.9346;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77805455 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77805643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5981;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77805741 . TC T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5710;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77805913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77805948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77805949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77805974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77806332 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77806427 . GT G 63 PASS INDEL;BAVGPOST=0.774;BRSQ=0.084;LDAF=0.1946;AVGPOST=0.7309;RSQ=0.2917;ERATE=0.0254;THETA=0.0003;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 77806434 rs11287373 TA T 53949 PASS INDEL;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.8019;AVGPOST=0.9889;RSQ=0.9738;ERATE=0.0019;THETA=0.0002;AC=1756;AN=2184 GT:DS:GL:BD 0.80402929 1
1 77806511 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1280;AVGPOST=0.9986;RSQ=0.9946;ERATE=0.0006;THETA=0.0003;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 77806662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77806778 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0374;AVGPOST=0.9984;RSQ=0.9861;ERATE=0.0003;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 77806954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8103;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=1769;AN=2184 GT:DS:GL:BD 0.80998170 1
1 77806977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9673;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77807104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9819;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77807106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6485;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77807187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5888;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77807397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5771;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77807429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8719;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77807581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77807627 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0038;AVGPOST=0.9978;RSQ=0.7703;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77807751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6471;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77807799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7605;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77807835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4486;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77807944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8459;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77808232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6726;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77808328 . CAT C 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77808347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0697;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 77808349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8377;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77808664 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9755;AVGPOST=0.9979;RSQ=0.9671;ERATE=0.0003;THETA=0.0003;AC=2131;AN=2184 GT:DS:GL:BD 0.97573262 1
1 77808677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1261;AVGPOST=0.9981;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77808707 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6336;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77808737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0067;AVGPOST=0.9960;RSQ=0.7826;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77808785 . TGTTGA T 183 PASS INDEL;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.3713;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77808817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6768;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77808900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0696;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 77808948 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6725;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77809136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1964;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 77809183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77809198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77809210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9671;AVGPOST=0.9994;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=2112;AN=2184 GT:DS:GL:BD 0.96703297 1
1 77809225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6368;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77809248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77809250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1748;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 77809300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8101;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0005;THETA=0.0004;AC=1769;AN=2184 GT:DS:GL:BD 0.80998170 1
1 77809329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8510;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77809330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6792;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77809364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77809415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77809450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77809460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0187;AVGPOST=0.9995;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77809500 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5104;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77809606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77809808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8250;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77809846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6348;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=1386;AN=2184 GT:DS:GL:BD 0.63461536 1
1 77809937 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8645;ERATE=0.0003;THETA=0.0038;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77810307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5542;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77810469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7657;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77810525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0530;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 77810613 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5072;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77810642 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.967;LDAF=0.0530;AVGPOST=0.9989;RSQ=0.9898;ERATE=0.0004;THETA=0.0005;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 77810663 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.877;LDAF=0.0120;AVGPOST=0.9959;RSQ=0.8701;ERATE=0.0005;THETA=0.0015;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77810748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6428;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77810755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9239;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77811022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77811086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1160;AVGPOST=0.9978;RSQ=0.9913;ERATE=0.0004;THETA=0.0002;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 77811112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1158;AVGPOST=0.9981;RSQ=0.9917;ERATE=0.0005;THETA=0.0003;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 77811207 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0057;AVGPOST=0.9990;RSQ=0.9297;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77811210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1198;AVGPOST=0.9984;RSQ=0.9945;ERATE=0.0003;THETA=0.0005;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 77811232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0107;AVGPOST=0.9979;RSQ=0.9272;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77811324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5743;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77811580 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0115;AVGPOST=0.9988;RSQ=0.9599;ERATE=0.0003;THETA=0.0001;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77811640 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1212;AVGPOST=0.9991;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 77811676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3102;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 77811701 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77811724 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77811762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77811795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0490;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0001;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 77812075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0146;AVGPOST=0.9988;RSQ=0.9732;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77812078 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1212;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0034;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 77812102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.9066;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77812208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0488;AVGPOST=0.9992;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 77812211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77812380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0107;AVGPOST=0.9972;RSQ=0.9228;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77812394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77812545 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77812568 . GC G 47640 PASS INDEL;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.9314;AVGPOST=0.9939;RSQ=0.9696;ERATE=0.0007;THETA=0.0026;AC=2034;AN=2184 GT:DS:GL:BD 0.93131870 1
1 77812572 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.942;LDAF=0.8727;AVGPOST=0.9683;RSQ=0.8971;ERATE=0.0106;THETA=0.0003;AC=1920;AN=2184 GT:DS:GL:BD 0.87912089 1
1 77812575 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.940;LDAF=0.8660;AVGPOST=0.9604;RSQ=0.8784;ERATE=0.0160;THETA=0.0003;AC=1909;AN=2184 GT:DS:GL:BD 0.87408423 1
1 77812803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1226;AVGPOST=0.9984;RSQ=0.9945;ERATE=0.0005;THETA=0.0003;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 77812951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77813300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7821;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77813428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0174;AVGPOST=0.9989;RSQ=0.9748;ERATE=0.0003;THETA=0.0027;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77813497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8340;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77813511 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1197;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 77813561 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9100;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77813573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0102;AVGPOST=0.9983;RSQ=0.9389;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77813587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0052;AVGPOST=0.9977;RSQ=0.8404;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77813696 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0061;AVGPOST=0.9991;RSQ=0.9346;ERATE=0.0003;THETA=0.0023;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77813830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6706;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77813836 . CAT C 11743 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0907;AVGPOST=0.9987;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 77814131 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0045;AVGPOST=0.9955;RSQ=0.6334;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77814193 . A AT 2348 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0174;AVGPOST=0.9981;RSQ=0.9542;ERATE=0.0004;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77814205 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77814230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0171;AVGPOST=0.9965;RSQ=0.9213;ERATE=0.0003;THETA=0.0001;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77814378 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8577;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77814408 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2926;AVGPOST=0.9983;RSQ=0.9964;ERATE=0.0005;THETA=0.0003;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 77814442 . CCA C 51685 PASS INDEL;BAVGPOST=0.999;BRSQ=0.548;LDAF=0.9880;AVGPOST=0.9848;RSQ=0.5127;ERATE=0.0020;THETA=0.0004;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 77814461 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7880;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77814485 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8845;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77814565 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.8009;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77814624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0181;AVGPOST=0.9993;RSQ=0.9802;ERATE=0.0005;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77814680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4741;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77814757 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2923;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 77814764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0090;AVGPOST=0.9981;RSQ=0.9290;ERATE=0.0004;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77814975 . T TA 212 PASS INDEL;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0046;AVGPOST=0.9936;RSQ=0.4790;ERATE=0.0016;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77814982 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77815043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77815099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77815220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9122;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77815320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.893;LDAF=0.0188;AVGPOST=0.9948;RSQ=0.9029;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77815425 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0495;AVGPOST=0.9992;RSQ=0.9926;ERATE=0.0003;THETA=0.0002;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 77815514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77815519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2042;AVGPOST=0.9973;RSQ=0.9943;ERATE=0.0005;THETA=0.0002;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 77815557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9786;ERATE=0.0003;THETA=0.0029;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77815566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2916;AVGPOST=0.9969;RSQ=0.9947;ERATE=0.0007;THETA=0.0004;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 77815582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5542;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77815627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0374;AVGPOST=0.9988;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 77815630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7078;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77816011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77816021 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77816132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77816158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6940;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77816178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77816250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77816280 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0126;AVGPOST=0.9994;RSQ=0.9802;ERATE=0.0003;THETA=0.0001;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77816315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8536;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77816367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9487;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=2072;AN=2184 GT:DS:GL:BD 0.94871795 1
1 77816588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.9100;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77816737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7531;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77816766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77816806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1249;AVGPOST=0.9975;RSQ=0.9907;ERATE=0.0006;THETA=0.0007;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77816810 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77816814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0901;AVGPOST=0.9988;RSQ=0.9946;ERATE=0.0005;THETA=0.0003;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 77816873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1262;AVGPOST=0.9937;RSQ=0.9783;ERATE=0.0016;THETA=0.0004;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 77816947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0088;AVGPOST=0.9973;RSQ=0.8778;ERATE=0.0004;THETA=0.0021;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77816965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.782;LDAF=0.0108;AVGPOST=0.9958;RSQ=0.8576;ERATE=0.0005;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77817029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.579;LDAF=0.0029;AVGPOST=0.9971;RSQ=0.6668;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77817130 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77817304 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3249;AVGPOST=0.9968;RSQ=0.9944;ERATE=0.0005;THETA=0.0002;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 77817458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1269;AVGPOST=0.9976;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 77817486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1226;AVGPOST=0.9983;RSQ=0.9946;ERATE=0.0004;THETA=0.0051;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 77817503 . GA G 124 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.8140;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77817588 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5051;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77817645 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2895;AVGPOST=0.9910;RSQ=0.9819;ERATE=0.0008;THETA=0.0002;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 77817722 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.585;LDAF=0.0040;AVGPOST=0.9967;RSQ=0.6672;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77817827 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.891;LDAF=0.1075;AVGPOST=0.9695;RSQ=0.8924;ERATE=0.0033;THETA=0.0006;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 77817834 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.939;LDAF=0.0922;AVGPOST=0.9939;RSQ=0.9730;ERATE=0.0008;THETA=0.0007;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 77817855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.380;LDAF=0.0149;AVGPOST=0.9809;RSQ=0.5112;ERATE=0.0023;THETA=0.0016;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77817860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.582;LDAF=0.0114;AVGPOST=0.9907;RSQ=0.6707;ERATE=0.0011;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77817971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2786;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=607;AN=2184 GT:DS:GL:BD 0.27793041 0
1 77818015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0039;AVGPOST=0.9977;RSQ=0.7563;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77818038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0004;THETA=0.0038;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77818143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1077;AVGPOST=0.9991;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 77818361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77818375 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6273;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77818377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77818453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9437;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0008;AC=2061;AN=2184 GT:DS:GL:BD 0.94368130 1
1 77818464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77818555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8073;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77818608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77818657 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0123;AVGPOST=0.9991;RSQ=0.9794;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77818700 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0141;AVGPOST=0.9973;RSQ=0.9389;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77818735 . A AT 185 PASS INDEL;BAVGPOST=0.955;BRSQ=0.652;LDAF=0.0890;AVGPOST=0.9151;RSQ=0.6086;ERATE=0.0048;THETA=0.0002;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 77818743 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.968;LDAF=0.0777;AVGPOST=0.9946;RSQ=0.9731;ERATE=0.0006;THETA=0.0005;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 77819015 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6087;AVGPOST=0.9914;RSQ=0.9869;ERATE=0.0009;THETA=0.0003;AC=1330;AN=2184 GT:DS:GL:BD 0.60897434 1
1 77819093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0486;AVGPOST=0.9988;RSQ=0.9881;ERATE=0.0004;THETA=0.0007;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 77819095 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77819118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.840;LDAF=0.0227;AVGPOST=0.9950;RSQ=0.9107;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77819141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77819146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6130;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=1337;AN=2184 GT:DS:GL:BD 0.61217946 1
1 77819252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8222;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77819279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0170;AVGPOST=0.9997;RSQ=0.9908;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77819281 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.7033;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77819310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77819598 . AC A 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6838;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77819700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5729;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77819743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7522;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=1642;AN=2184 GT:DS:GL:BD 0.75183153 1
1 77819902 . T TC 2863 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0174;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77819941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.7527;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=1644;AN=2184 GT:DS:GL:BD 0.75274724 1
1 77820002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.3030;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77820011 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9910;ERATE=0.0004;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77820021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77820118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9729;AVGPOST=0.9989;RSQ=0.9883;ERATE=0.0003;THETA=0.0003;AC=2125;AN=2184 GT:DS:GL:BD 0.97298533 1
1 77820121 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7400;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77820127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1328;AVGPOST=0.9972;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 77820363 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5831;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77820406 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0160;AVGPOST=0.9992;RSQ=0.9806;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77820505 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9992;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77820571 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6290;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77820644 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8396;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77820653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9552;AVGPOST=0.9991;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=2087;AN=2184 GT:DS:GL:BD 0.95558608 1
1 77820685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3071;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 77820743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.3743;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77820756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8994;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77820760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.649;LDAF=0.0039;AVGPOST=0.9981;RSQ=0.8034;ERATE=0.0006;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77820817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0926;AVGPOST=0.9980;RSQ=0.9926;ERATE=0.0003;THETA=0.0004;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 77820923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77820926 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0179;AVGPOST=0.9983;RSQ=0.9584;ERATE=0.0004;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77820955 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77820969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5874;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77820989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0055;AVGPOST=0.9971;RSQ=0.7912;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77821129 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1293;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0004;THETA=0.0006;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 77821263 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7104;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77821274 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6929;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77821456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8762;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77821522 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5604;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77821587 . CACAT C 47581 PASS INDEL;BAVGPOST=0.968;BRSQ=0.593;LDAF=0.9413;AVGPOST=0.9393;RSQ=0.5762;ERATE=0.0099;THETA=0.0003;AC=2090;AN=2184 GT:DS:GL:BD 0.95695972 1
1 77821728 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0096;AVGPOST=0.9983;RSQ=0.9228;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77821788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7439;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77821900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1081;AVGPOST=0.9975;RSQ=0.9900;ERATE=0.0004;THETA=0.0003;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 77822073 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.9569;AVGPOST=0.9989;RSQ=0.9892;ERATE=0.0003;THETA=0.0003;AC=2091;AN=2184 GT:DS:GL:BD 0.95741761 1
1 77822171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1419;AVGPOST=0.9963;RSQ=0.9912;ERATE=0.0003;THETA=0.0002;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 77822177 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6907;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77822196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5963;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77822197 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77822240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9412;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77822263 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77822334 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6780;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77822475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0694;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0008;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 77822519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1468;AVGPOST=0.9988;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 77822619 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.1497;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77822661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7853;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77822669 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77822701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1393;AVGPOST=0.9984;RSQ=0.9948;ERATE=0.0005;THETA=0.0002;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 77822740 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1335;AVGPOST=0.9955;RSQ=0.9855;ERATE=0.0010;THETA=0.0002;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 77822780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8960;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77822783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1965;AVGPOST=0.9979;RSQ=0.9954;ERATE=0.0003;THETA=0.0001;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 77822880 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77822934 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0352;AVGPOST=0.9973;RSQ=0.9695;ERATE=0.0003;THETA=0.0002;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 77822980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77823028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1970;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 77823085 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.9547;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 77823220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9757;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77823527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77823631 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8561;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77823660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.819;LDAF=0.0079;AVGPOST=0.9979;RSQ=0.9066;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77823673 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9199;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77823740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0488;AVGPOST=0.9993;RSQ=0.9928;ERATE=0.0003;THETA=0.0002;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 77823786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77823959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9536;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77824137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9647;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77824246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0487;AVGPOST=0.9992;RSQ=0.9924;ERATE=0.0003;THETA=0.0002;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 77824428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6253;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77824506 . A AC 163 PASS INDEL;BAVGPOST=0.932;BRSQ=0.262;LDAF=0.1007;AVGPOST=0.8623;RSQ=0.4216;ERATE=0.0098;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 77824507 . A AC 141 PASS INDEL;BAVGPOST=0.940;BRSQ=0.257;LDAF=0.0779;AVGPOST=0.8927;RSQ=0.4349;ERATE=0.0081;THETA=0.0003;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 77824558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8597;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77824645 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1396;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 77824661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0492;AVGPOST=0.9985;RSQ=0.9851;ERATE=0.0005;THETA=0.0003;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 77824700 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0162;AVGPOST=0.9986;RSQ=0.9653;ERATE=0.0004;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77824736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.949;LDAF=0.5290;AVGPOST=0.9718;RSQ=0.9570;ERATE=0.0028;THETA=0.0001;AC=1159;AN=2184 GT:DS:GL:BD 0.53067768 1
1 77824908 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77824988 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0016;AVGPOST=0.9973;RSQ=0.3883;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77825042 . TA T 180 PASS INDEL;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5574;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77825222 rs74377120 G GA 13173 PASS INDEL;BAVGPOST=0.983;BRSQ=0.953;LDAF=0.2153;AVGPOST=0.9525;RSQ=0.8972;ERATE=0.0095;THETA=0.0002;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 77825315 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7462;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77825357 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6950;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77825460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.875;LDAF=0.0106;AVGPOST=0.9982;RSQ=0.9366;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77825469 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77825474 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77825478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6588;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=1438;AN=2184 GT:DS:GL:BD 0.65842491 1
1 77825651 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7592;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77825660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0171;AVGPOST=0.9984;RSQ=0.9640;ERATE=0.0004;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77825681 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0694;AVGPOST=0.9993;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 77825752 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9365;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77825838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0155;AVGPOST=0.9991;RSQ=0.9837;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77825907 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0484;AVGPOST=0.9996;RSQ=0.9959;ERATE=0.0003;THETA=0.0007;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 77825913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77825924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77825925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1981;AVGPOST=0.9985;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 77825996 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0929;AVGPOST=0.9991;RSQ=0.9957;ERATE=0.0003;THETA=0.0006;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 77826056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3072;AVGPOST=0.9978;RSQ=0.9960;ERATE=0.0005;THETA=0.0002;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 77826060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0170;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0003;THETA=0.0023;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77826172 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8688;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77826176 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9647;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77826182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9355;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77826300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77826327 rs74986889 TGTTTG T 5004 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0492;AVGPOST=0.9984;RSQ=0.9848;ERATE=0.0006;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 77826332 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0503;AVGPOST=0.9969;RSQ=0.9795;ERATE=0.0006;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 77826432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77826496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.9334;AVGPOST=0.9983;RSQ=0.9923;ERATE=0.0003;THETA=0.0044;AC=2040;AN=2184 GT:DS:GL:BD 0.93406594 1
1 77826618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8900;ERATE=0.0003;THETA=0.0089;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77826642 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77826732 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1940;AVGPOST=0.9979;RSQ=0.9948;ERATE=0.0003;THETA=0.0199;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 77826795 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77826812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8872;ERATE=0.0003;THETA=0.0094;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77826988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77827000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6013;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77827002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.6010;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77827044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77827179 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9345;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77827391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77827502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7929;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77827635 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77827658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.893;LDAF=0.0157;AVGPOST=0.9973;RSQ=0.9270;ERATE=0.0003;THETA=0.0173;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77827659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0729;AVGPOST=0.9985;RSQ=0.9907;ERATE=0.0003;THETA=0.0098;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 77827853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4524;ERATE=0.0004;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77827912 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0918;AVGPOST=0.9985;RSQ=0.9929;ERATE=0.0003;THETA=0.0019;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 77828031 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7053;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77828069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0106;AVGPOST=0.9974;RSQ=0.9003;ERATE=0.0005;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77828152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5501;AVGPOST=0.9947;RSQ=0.9916;ERATE=0.0009;THETA=0.0014;AC=1201;AN=2184 GT:DS:GL:BD 0.54990840 1
1 77828188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4304;ERATE=0.0005;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77828321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.5988;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=1308;AN=2184 GT:DS:GL:BD 0.59890109 1
1 77828560 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77828588 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6025;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77828665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3037;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 77828690 . AC A 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7230;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77828807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7579;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=1655;AN=2184 GT:DS:GL:BD 0.75778389 1
1 77828887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77828912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.6113;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77828942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0886;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 77829007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8187;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77829101 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8284;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77829118 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1004;AVGPOST=0.9989;RSQ=0.9951;ERATE=0.0004;THETA=0.0005;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 77829164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9728;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77829339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0813;AVGPOST=0.9992;RSQ=0.9952;ERATE=0.0004;THETA=0.0005;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77829365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77829385 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9110;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77829597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5980;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77829604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77829627 . AT A 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5319;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77829645 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77829709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.1487;AVGPOST=0.9983;RSQ=0.9940;ERATE=0.0004;THETA=0.0002;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 77829796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7579;AVGPOST=0.9979;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=1656;AN=2184 GT:DS:GL:BD 0.75824177 1
1 77830105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0814;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77830106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8678;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77830128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77830222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8652;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77830517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6898;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77830607 MERGED_DEL_2_4044 T <DEL> . . SV;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0029;AVGPOST=0.9961;RSQ=0.5289;ERATE=0.0007;THETA=0.0004;CIEND=-17,33;CIPOS=-18,19;END=77832664;SOURCE=GenomeStrip_77830607_77832664;SVTYPE=DEL;AC=2;AN=21 GT:DS:GL:BD 0.00091575 0
1 77830689 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8512;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77830713 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8557;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77830720 . G GT 48 PASS INDEL;BAVGPOST=0.994;BRSQ=0.540;LDAF=0.0117;AVGPOST=0.9855;RSQ=0.5186;ERATE=0.0048;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77830889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0063;AVGPOST=0.9984;RSQ=0.8891;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77830915 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5285;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77831059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6739;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77831097 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0150;AVGPOST=0.9994;RSQ=0.9840;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77831105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0517;AVGPOST=0.9982;RSQ=0.9860;ERATE=0.0003;THETA=0.0003;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 77831186 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1053;AVGPOST=0.9989;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 77831192 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77831194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0152;AVGPOST=0.9990;RSQ=0.9723;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77831350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3047;AVGPOST=0.9971;RSQ=0.9946;ERATE=0.0005;THETA=0.0004;AC=665;AN=2184 GT:DS:GL:BD 0.30448717 0
1 77831533 . CTT C 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8142;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77831564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1589;AVGPOST=0.9973;RSQ=0.9929;ERATE=0.0004;THETA=0.0013;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 77831603 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5908;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77831652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7580;AVGPOST=0.9964;RSQ=0.9924;ERATE=0.0005;THETA=0.0008;AC=1657;AN=2184 GT:DS:GL:BD 0.75869966 1
1 77831698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0080;AVGPOST=0.9993;RSQ=0.9577;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77831738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5437;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77831797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77831799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1016;AVGPOST=0.9986;RSQ=0.9936;ERATE=0.0004;THETA=0.0005;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 77831812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9339;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77831889 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9554;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77832122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.661;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8177;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77832250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0932;AVGPOST=0.9985;RSQ=0.9923;ERATE=0.0005;THETA=0.0015;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 77832386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9627;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77832610 . T TGAC 366 PASS INDEL;BAVGPOST=0.745;BRSQ=0.107;LDAF=0.1922;AVGPOST=0.7548;RSQ=0.3810;ERATE=0.0181;THETA=0.0006;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 77832757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77832805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6813;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77832904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7728;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77832921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5789;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77832940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5357;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77833065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0078;AVGPOST=0.9964;RSQ=0.8313;ERATE=0.0005;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77833142 . G GGA 29544 PASS INDEL;BAVGPOST=0.976;BRSQ=0.942;LDAF=0.7317;AVGPOST=0.9363;RSQ=0.8875;ERATE=0.0054;THETA=0.0008;AC=1622;AN=2184 GT:DS:GL:BD 0.74267399 1
1 77833168 . GT G 2055 PASS INDEL;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.1017;AVGPOST=0.9729;RSQ=0.8913;ERATE=0.0032;THETA=0.0013;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 77833170 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0121;AVGPOST=0.9968;RSQ=0.8790;ERATE=0.0007;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77833215 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.950;LDAF=0.2163;AVGPOST=0.9803;RSQ=0.9539;ERATE=0.0006;THETA=0.0006;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 77833241 . T TA 675 PASS INDEL;BAVGPOST=0.695;BRSQ=0.128;LDAF=0.2972;AVGPOST=0.6596;RSQ=0.2964;ERATE=0.0353;THETA=0.0004;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 77833256 rs58146762 A ATGT 4481 PASS INDEL;BAVGPOST=0.495;BRSQ=0.144;LDAF=0.3810;AVGPOST=0.6689;RSQ=0.4017;ERATE=0.0336;THETA=0.0005;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 77833274 . T TTA 7994 PASS INDEL;BAVGPOST=0.466;BRSQ=0.073;LDAF=0.6351;AVGPOST=0.6329;RSQ=0.3304;ERATE=0.0374;THETA=0.0007;AC=1477;AN=2184 GT:DS:GL:BD 0.67628205 1
1 77833283 . TAA T 927 PASS INDEL;BAVGPOST=0.730;BRSQ=0.106;LDAF=0.1957;AVGPOST=0.7649;RSQ=0.3840;ERATE=0.0137;THETA=0.0004;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 77833295 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.442;BRSQ=0.144;LDAF=0.4109;AVGPOST=0.6554;RSQ=0.3922;ERATE=0.0401;THETA=0.0014;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 77833297 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.191;LDAF=0.0993;AVGPOST=0.8799;RSQ=0.4943;ERATE=0.0050;THETA=0.0058;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 77833305 . T TTA 3888 PASS INDEL;BAVGPOST=0.681;BRSQ=0.143;LDAF=0.2818;AVGPOST=0.6791;RSQ=0.3298;ERATE=0.0309;THETA=0.0008;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 77833315 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.712;BRSQ=0.198;LDAF=0.2685;AVGPOST=0.7328;RSQ=0.4242;ERATE=0.0221;THETA=0.0008;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 77833324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.899;BRSQ=0.238;LDAF=0.1500;AVGPOST=0.8156;RSQ=0.4367;ERATE=0.0128;THETA=0.0010;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 77833339 rs72162904 TTA T 928 PASS INDEL;BAVGPOST=0.854;BRSQ=0.134;LDAF=0.1395;AVGPOST=0.8217;RSQ=0.3992;ERATE=0.0131;THETA=0.0014;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 77833355 . TATAA T 182 PASS INDEL;BAVGPOST=0.964;BRSQ=0.126;LDAF=0.0814;AVGPOST=0.8943;RSQ=0.4643;ERATE=0.0049;THETA=0.0017;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 77833372 . ATATACGT A 600 PASS INDEL;BAVGPOST=0.888;BRSQ=0.125;LDAF=0.1557;AVGPOST=0.7896;RSQ=0.3669;ERATE=0.0138;THETA=0.0046;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 77833379 . TTA T 610 PASS INDEL;BAVGPOST=0.894;BRSQ=0.125;LDAF=0.1227;AVGPOST=0.8362;RSQ=0.4177;ERATE=0.0081;THETA=0.0022;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 77833420 . TAC T 208 PASS INDEL;BAVGPOST=0.884;BRSQ=0.067;LDAF=0.1505;AVGPOST=0.7771;RSQ=0.2936;ERATE=0.0181;THETA=0.0008;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 77833422 rs72420381 CGT C 563 PASS INDEL;BAVGPOST=0.845;BRSQ=0.087;LDAF=0.1646;AVGPOST=0.7784;RSQ=0.3435;ERATE=0.0157;THETA=0.0009;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 77833431 . T TTA 4106 PASS INDEL;BAVGPOST=0.396;BRSQ=0.059;LDAF=0.3230;AVGPOST=0.7037;RSQ=0.4347;ERATE=0.0154;THETA=0.0009;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 77833435 . ATATGT A 809 PASS INDEL;BAVGPOST=0.765;BRSQ=0.086;LDAF=0.2046;AVGPOST=0.7527;RSQ=0.4032;ERATE=0.0142;THETA=0.0016;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 77833448 . AAT A 347 PASS INDEL;BAVGPOST=0.757;BRSQ=0.048;LDAF=0.1431;AVGPOST=0.7862;RSQ=0.2768;ERATE=0.0148;THETA=0.0060;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 77833472 rs58161720 TTA T 652 PASS INDEL;BAVGPOST=0.630;BRSQ=0.054;LDAF=0.2942;AVGPOST=0.6368;RSQ=0.2432;ERATE=0.0363;THETA=0.0007;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 77833488 . TAA T 1462 PASS INDEL;BAVGPOST=0.705;BRSQ=0.046;LDAF=0.8750;AVGPOST=0.8520;RSQ=0.4675;ERATE=0.0054;THETA=0.0009;AC=1997;AN=2184 GT:DS:GL:BD 0.91437727 1
1 77833491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.862;BRSQ=0.125;LDAF=0.1762;AVGPOST=0.7572;RSQ=0.3103;ERATE=0.0203;THETA=0.0032;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 77833497 . TTA T 420 PASS INDEL;BAVGPOST=0.742;BRSQ=0.065;LDAF=0.1694;AVGPOST=0.7750;RSQ=0.3439;ERATE=0.0116;THETA=0.0005;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 77833521 rs67319804 GTTATATATA G 3103 PASS INDEL;BAVGPOST=0.329;BRSQ=0.044;LDAF=0.6195;AVGPOST=0.6034;RSQ=0.2505;ERATE=0.0378;THETA=0.0012;AC=1477;AN=2184 GT:DS:GL:BD 0.67628205 1
1 77833522 rs67319804 TTA T 472 PASS INDEL;BAVGPOST=0.554;BRSQ=0.028;LDAF=0.2621;AVGPOST=0.6784;RSQ=0.2910;ERATE=0.0239;THETA=0.0008;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 77833567 . A AT 258 PASS INDEL;BAVGPOST=0.762;BRSQ=0.043;LDAF=0.1990;AVGPOST=0.7221;RSQ=0.2848;ERATE=0.0165;THETA=0.0040;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 77833585 rs59813735 ATTAT A 4208 PASS INDEL;BAVGPOST=0.458;BRSQ=0.036;LDAF=0.3460;AVGPOST=0.6059;RSQ=0.2316;ERATE=0.0440;THETA=0.0012;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 77833786 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.457;LDAF=0.0109;AVGPOST=0.9901;RSQ=0.6669;ERATE=0.0007;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77833809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.245;LDAF=0.0087;AVGPOST=0.9956;RSQ=0.7797;ERATE=0.0007;THETA=0.0025;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77833911 . T TA 36 PASS INDEL;BAVGPOST=0.963;BRSQ=0.101;LDAF=0.1248;AVGPOST=0.8283;RSQ=0.3914;ERATE=0.0068;THETA=0.0014;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 77833918 . AT A 79 PASS INDEL;BAVGPOST=0.853;BRSQ=0.058;LDAF=0.1541;AVGPOST=0.7776;RSQ=0.3342;ERATE=0.0150;THETA=0.0008;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 77833927 . TA T 275 PASS INDEL;BAVGPOST=0.736;BRSQ=0.049;LDAF=0.1748;AVGPOST=0.7857;RSQ=0.4008;ERATE=0.0087;THETA=0.0005;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 77833935 . TATA T 524 PASS INDEL;BAVGPOST=0.885;BRSQ=0.178;LDAF=0.1335;AVGPOST=0.8389;RSQ=0.4502;ERATE=0.0041;THETA=0.0009;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 77833937 . TA T 457 PASS INDEL;BAVGPOST=0.873;BRSQ=0.192;LDAF=0.1381;AVGPOST=0.8245;RSQ=0.4203;ERATE=0.0069;THETA=0.0007;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 77833945 . ATGTT A 289 PASS INDEL;BAVGPOST=0.886;BRSQ=0.179;LDAF=0.1102;AVGPOST=0.8791;RSQ=0.5247;ERATE=0.0029;THETA=0.0007;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 77833949 . T TATATATA 1575 PASS INDEL;BAVGPOST=0.831;BRSQ=0.225;LDAF=0.1676;AVGPOST=0.8294;RSQ=0.5062;ERATE=0.0036;THETA=0.0005;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 77833956 . ATG A 873 PASS INDEL;BAVGPOST=0.851;BRSQ=0.212;LDAF=0.1517;AVGPOST=0.8285;RSQ=0.4701;ERATE=0.0053;THETA=0.0009;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 77833959 . TTATATATGTTA T 1990 PASS INDEL;BAVGPOST=0.807;BRSQ=0.252;LDAF=0.2251;AVGPOST=0.7434;RSQ=0.4063;ERATE=0.0162;THETA=0.0005;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 77833985 . A ATG 251 PASS INDEL;BAVGPOST=0.929;BRSQ=0.282;LDAF=0.1122;AVGPOST=0.8499;RSQ=0.4179;ERATE=0.0092;THETA=0.0013;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 77833997 . TTATATATAA T 1541 PASS INDEL;BAVGPOST=0.927;BRSQ=0.470;LDAF=0.1026;AVGPOST=0.9309;RSQ=0.7226;ERATE=0.0028;THETA=0.0068;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 77834006 rs71075738 ATATATATGT A 4608 PASS INDEL;BAVGPOST=0.953;BRSQ=0.764;LDAF=0.1288;AVGPOST=0.9223;RSQ=0.7376;ERATE=0.0056;THETA=0.0009;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 77834050 . TAC T 151 PASS INDEL;BAVGPOST=0.982;BRSQ=0.518;LDAF=0.0439;AVGPOST=0.9415;RSQ=0.4386;ERATE=0.0095;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 77834140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2933;AVGPOST=0.9948;RSQ=0.9894;ERATE=0.0006;THETA=0.0007;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 77834173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.939;LDAF=0.0989;AVGPOST=0.9947;RSQ=0.9782;ERATE=0.0004;THETA=0.0015;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 77834175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5142;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77834182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7562;AVGPOST=0.9946;RSQ=0.9892;ERATE=0.0004;THETA=0.0006;AC=1650;AN=2184 GT:DS:GL:BD 0.75549453 1
1 77834196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.939;LDAF=0.0990;AVGPOST=0.9944;RSQ=0.9766;ERATE=0.0003;THETA=0.0004;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 77834197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0095;AVGPOST=0.9982;RSQ=0.9263;ERATE=0.0005;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77834226 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0441;AVGPOST=0.9960;RSQ=0.9671;ERATE=0.0003;THETA=0.0008;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 77834336 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6606;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77834367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0941;AVGPOST=0.9966;RSQ=0.9860;ERATE=0.0004;THETA=0.0002;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 77834383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1980;AVGPOST=0.9948;RSQ=0.9864;ERATE=0.0010;THETA=0.0008;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 77834563 . AG A 727 PASS INDEL;BAVGPOST=0.995;BRSQ=0.733;LDAF=0.0118;AVGPOST=0.9946;RSQ=0.8325;ERATE=0.0005;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77834726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9831;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77834913 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1959;AVGPOST=0.9977;RSQ=0.9940;ERATE=0.0004;THETA=0.0022;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 77835042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8395;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77835199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.739;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.7751;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77835273 . TGA T 5993 PASS INDEL;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0715;AVGPOST=0.9957;RSQ=0.9749;ERATE=0.0004;THETA=0.0006;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 77835361 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.7013;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77835362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5574;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77835420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0119;AVGPOST=0.9982;RSQ=0.9398;ERATE=0.0003;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77835460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77835488 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9350;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77835507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1610;AVGPOST=0.9974;RSQ=0.9926;ERATE=0.0007;THETA=0.0005;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 77835595 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77835605 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6137;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77835831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.9911;AVGPOST=0.9995;RSQ=0.9702;ERATE=0.0004;THETA=0.0003;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 77835938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1602;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 77836062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.964;LDAF=0.0521;AVGPOST=0.9988;RSQ=0.9894;ERATE=0.0004;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 77836073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77836156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8196;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77836248 . T TA 245 PASS INDEL;BAVGPOST=0.997;BRSQ=0.734;LDAF=0.0072;AVGPOST=0.9939;RSQ=0.6878;ERATE=0.0013;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77836442 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77836443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6895;ERATE=0.0004;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77836445 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77836489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7586;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0005;THETA=0.0003;AC=1656;AN=2184 GT:DS:GL:BD 0.75824177 1
1 77836541 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77836733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6873;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77836949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5989;AVGPOST=0.9988;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 77837106 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2954;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0003;THETA=0.0007;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 77837131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9228;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77837386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8362;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77837419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7541;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77837435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6491;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77837477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77837540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5469;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77837640 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77837673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7048;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77837678 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.860;LDAF=0.0149;AVGPOST=0.9977;RSQ=0.9406;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77837743 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77837838 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9256;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77837877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.720;LDAF=0.0210;AVGPOST=0.9859;RSQ=0.7344;ERATE=0.0005;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77838317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0819;AVGPOST=0.9976;RSQ=0.9876;ERATE=0.0006;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77838442 rs79604774 ATG A 10386 PASS INDEL;BAVGPOST=0.974;BRSQ=0.919;LDAF=0.1797;AVGPOST=0.9560;RSQ=0.8927;ERATE=0.0093;THETA=0.0003;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 77838451 rs72042133 T TGTGC 2371 PASS INDEL;BAVGPOST=0.928;BRSQ=0.721;LDAF=0.1678;AVGPOST=0.8965;RSQ=0.7143;ERATE=0.0203;THETA=0.0002;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 77838453 rs72270793 T TGC 1533 PASS INDEL;BAVGPOST=0.959;BRSQ=0.795;LDAF=0.1080;AVGPOST=0.9436;RSQ=0.7976;ERATE=0.0080;THETA=0.0004;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 77838455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.826;LDAF=0.1586;AVGPOST=0.9385;RSQ=0.8148;ERATE=0.0253;THETA=0.0006;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 77838820 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2954;AVGPOST=0.9973;RSQ=0.9946;ERATE=0.0005;THETA=0.0007;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 77838906 . AT A 1261 PASS INDEL;BAVGPOST=0.930;BRSQ=0.623;LDAF=0.1090;AVGPOST=0.9461;RSQ=0.8145;ERATE=0.0044;THETA=0.0004;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 77838907 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1601;AVGPOST=0.9984;RSQ=0.9948;ERATE=0.0005;THETA=0.0003;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 77838915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77839004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77839123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77839137 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5334;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77839281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3011;AVGPOST=0.9951;RSQ=0.9909;ERATE=0.0006;THETA=0.0005;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 77839371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7775;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77839438 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0054;AVGPOST=0.9982;RSQ=0.8686;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77839465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1515;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 77839480 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2958;AVGPOST=0.9969;RSQ=0.9940;ERATE=0.0005;THETA=0.0003;AC=647;AN=2184 GT:DS:GL:BD 0.29624543 0
1 77839581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7478;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77839604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77839661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0822;AVGPOST=0.9981;RSQ=0.9900;ERATE=0.0004;THETA=0.0005;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77839736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77839755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7679;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77839798 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5417;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77839827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7161;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77839828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77839903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5542;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77840066 . AT A 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3748;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77840098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0058;AVGPOST=0.9959;RSQ=0.7641;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77840100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1599;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 77840156 rs67962599 TA T 9179 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0825;AVGPOST=0.9994;RSQ=0.9962;ERATE=0.0003;THETA=0.0007;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 77840200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9759;AVGPOST=0.9987;RSQ=0.9797;ERATE=0.0003;THETA=0.0005;AC=2131;AN=2184 GT:DS:GL:BD 0.97573262 1
1 77840308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.9913;AVGPOST=0.9996;RSQ=0.9806;ERATE=0.0003;THETA=0.0003;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 77840318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6960;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77840385 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7578;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77840517 . AAAG A 141 PASS INDEL;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5571;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77840538 . T TCACTA 106 PASS INDEL;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4728;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77840641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8580;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77840648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0041;AVGPOST=0.9967;RSQ=0.6942;ERATE=0.0011;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77840684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77840701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5834;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77840702 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5347;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77840760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77840831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.639;LDAF=0.0279;AVGPOST=0.9746;RSQ=0.6439;ERATE=0.0083;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77840891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6704;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77840938 rs76234526 T TA 113617 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8643;AVGPOST=0.9981;RSQ=0.9937;ERATE=0.0005;THETA=0.0015;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 77841081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9756;AVGPOST=0.9978;RSQ=0.9708;ERATE=0.0003;THETA=0.0006;AC=2131;AN=2184 GT:DS:GL:BD 0.97573262 1
1 77841362 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77841366 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1595;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0005;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 77841422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9771;AVGPOST=0.9998;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=2134;AN=2184 GT:DS:GL:BD 0.97710621 1
1 77841442 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77841585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5984;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0004;THETA=0.0008;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 77841634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1600;AVGPOST=0.9986;RSQ=0.9959;ERATE=0.0004;THETA=0.0009;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 77841663 . GTACAAA G 147 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5675;ERATE=0.0005;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77841726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77841733 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7428;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77841755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0814;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0007;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77841791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77841828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9066;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77841876 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7528;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77841908 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2950;AVGPOST=0.9971;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 77841988 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9996;RSQ=0.9548;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77841999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.905;LDAF=0.0158;AVGPOST=0.9984;RSQ=0.9627;ERATE=0.0003;THETA=0.0025;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77842002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8093;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77842004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5277;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77842064 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77842123 . AAAAAAAAAAAAAC A 2486 PASS INDEL;BAVGPOST=0.959;BRSQ=0.551;LDAF=0.0551;AVGPOST=0.9796;RSQ=0.8433;ERATE=0.0011;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 77842135 rs10610715 AC A 42133 PASS INDEL;BAVGPOST=0.948;BRSQ=0.655;LDAF=0.9027;AVGPOST=0.9442;RSQ=0.7580;ERATE=0.0054;THETA=0.0010;AC=1977;AN=2184 GT:DS:GL:BD 0.90521979 1
1 77842136 rs10610715 C CA 5455 PASS INDEL;BAVGPOST=0.584;BRSQ=0.304;LDAF=0.5381;AVGPOST=0.7016;RSQ=0.5429;ERATE=0.0182;THETA=0.0002;AC=1099;AN=2184 GT:DS:GL:BD 0.50320512 1
1 77842138 . A AC 294 PASS INDEL;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0068;AVGPOST=0.9960;RSQ=0.7688;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77842140 . A AC 80 PASS INDEL;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0059;AVGPOST=0.9940;RSQ=0.6396;ERATE=0.0010;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77842173 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9713;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77842177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7478;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77842207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.0920;AVGPOST=0.9979;RSQ=0.9903;ERATE=0.0003;THETA=0.0004;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 77842210 . GTCTTC G 771 PASS INDEL;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0050;AVGPOST=0.9976;RSQ=0.7980;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77842245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9698;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77842249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0196;AVGPOST=0.9940;RSQ=0.8775;ERATE=0.0012;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77842264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0137;AVGPOST=0.9996;RSQ=0.9871;ERATE=0.0003;THETA=0.0031;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77842289 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7136;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77842317 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9996;RSQ=0.9769;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77842335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6563;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77842415 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8378;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0011;AC=1829;AN=2184 GT:DS:GL:BD 0.83745420 1
1 77842455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77842496 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8117;ERATE=0.0004;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77842523 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4723;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77842654 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5965;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77842675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7303;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77842702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0162;AVGPOST=0.9988;RSQ=0.9690;ERATE=0.0003;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77842733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9541;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77842750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77842755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7406;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77842759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9619;ERATE=0.0003;THETA=0.0030;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77842763 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7304;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0007;THETA=0.0004;AC=1596;AN=2184 GT:DS:GL:BD 0.73076922 1
1 77842810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6866;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77842861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6368;AVGPOST=0.9953;RSQ=0.9923;ERATE=0.0005;THETA=0.0002;AC=1391;AN=2184 GT:DS:GL:BD 0.63690478 1
1 77842871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0004;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77842974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9902;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77842978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77843287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77843419 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3578;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 77843457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77843688 . ATG A 6220 PASS INDEL;BAVGPOST=0.953;BRSQ=0.907;LDAF=0.3341;AVGPOST=0.9640;RSQ=0.9412;ERATE=0.0017;THETA=0.0030;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 77843689 rs35838303 TG T 44313 PASS INDEL;BAVGPOST=0.988;BRSQ=0.975;LDAF=0.3582;AVGPOST=0.9953;RSQ=0.9915;ERATE=0.0007;THETA=0.0003;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 77843843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8333;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77843870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.809;LDAF=0.0181;AVGPOST=0.9966;RSQ=0.9233;ERATE=0.0005;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77843979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4074;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77844015 . AT A 196 PASS INDEL;BAVGPOST=0.965;BRSQ=0.456;LDAF=0.0593;AVGPOST=0.9202;RSQ=0.4355;ERATE=0.0209;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 77844100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2150;AVGPOST=0.9977;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 77844165 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8958;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77844209 . TTGA T 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7478;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77844364 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8291;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77844515 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5366;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77844553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2298;AVGPOST=0.9974;RSQ=0.9938;ERATE=0.0009;THETA=0.0004;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 77844602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5928;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=1294;AN=2184 GT:DS:GL:BD 0.59249085 1
1 77844614 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77844618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6846;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77844641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8015;ERATE=0.0004;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77844659 . C CAG 795 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.8904;ERATE=0.0004;THETA=0.0047;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77844824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77844850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77844894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77844915 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9482;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77845015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7935;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77845051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0038;AVGPOST=0.9975;RSQ=0.7570;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77845085 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0897;AVGPOST=0.9992;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 77845187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7478;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77845589 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77845663 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0057;AVGPOST=0.9991;RSQ=0.9403;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77845719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77845726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77845805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77845810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77845832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0066;AVGPOST=0.9965;RSQ=0.7968;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77845833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.885;LDAF=0.0165;AVGPOST=0.9946;RSQ=0.8827;ERATE=0.0009;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77846020 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7051;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77846057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3942;AVGPOST=0.9977;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=862;AN=2184 GT:DS:GL:BD 0.39468864 0
1 77846076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0060;AVGPOST=0.9984;RSQ=0.8912;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77846143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1293;AVGPOST=0.9987;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 77846207 . CAT C 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7214;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77846230 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77846238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77846322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6580;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77846361 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7631;ERATE=0.0003;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77846452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0818;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 77846479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9768;AVGPOST=0.9992;RSQ=0.9871;ERATE=0.0003;THETA=0.0003;AC=2134;AN=2184 GT:DS:GL:BD 0.97710621 1
1 77846498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9370;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77846560 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77846598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9877;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77846615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2691;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 77846703 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0839;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 77846758 . TAG T 224 PASS INDEL;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6060;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77846777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9668;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77846778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7037;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77846779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9444;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77846783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2694;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=589;AN=2184 GT:DS:GL:BD 0.26968864 0
1 77846784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77846799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6834;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77846809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3947;AVGPOST=0.9969;RSQ=0.9953;ERATE=0.0006;THETA=0.0001;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 77847069 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6494;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77847079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9371;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77847151 rs11275907 TATGTACAAGACAC T 56083 PASS INDEL;BAVGPOST=0.975;BRSQ=0.955;LDAF=0.4053;AVGPOST=0.9633;RSQ=0.9484;ERATE=0.0057;THETA=0.0006;AC=896;AN=2184 GT:DS:GL:BD 0.41025642 0
1 77847267 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0070;AVGPOST=0.9990;RSQ=0.9413;ERATE=0.0004;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77847273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77847279 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9774;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77847321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.878;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9801;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77847351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77847358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7427;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77847372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77847509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77847516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1301;AVGPOST=0.9969;RSQ=0.9875;ERATE=0.0003;THETA=0.0003;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 77847570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4217;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77847795 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7170;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77847901 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0076;AVGPOST=0.9980;RSQ=0.8785;ERATE=0.0007;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77847972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0513;AVGPOST=0.9990;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 77848044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0046;AVGPOST=0.9972;RSQ=0.7437;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77848246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9406;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77848279 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5491;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77848281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5579;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77848282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9350;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77848442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7340;ERATE=0.0004;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77848518 . TTAA T 948 PASS INDEL;BAVGPOST=0.997;BRSQ=0.804;LDAF=0.0086;AVGPOST=0.9964;RSQ=0.8177;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77848548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0817;AVGPOST=0.9987;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77848623 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77848686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0090;AVGPOST=0.9988;RSQ=0.9452;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77848697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7243;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77848929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77848962 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77848984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9982;RSQ=0.8462;ERATE=0.0006;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77849051 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77849121 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0039;AVGPOST=0.9968;RSQ=0.6819;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77849356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0044;AVGPOST=0.9971;RSQ=0.7368;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77849435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8807;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77849576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7286;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77849632 rs66744904 GA G 18718 PASS INDEL;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2737;AVGPOST=0.9935;RSQ=0.9867;ERATE=0.0007;THETA=0.0005;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 77849698 . A AC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7171;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77849790 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77849812 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8259;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77849913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6938;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77850167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9459;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77850290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77850423 . G GT 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77850497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77850533 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9560;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77850583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7404;ERATE=0.0006;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77850657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77850678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0050;AVGPOST=0.9979;RSQ=0.8559;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77850716 rs67288225 AAT A 1832 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9874;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77850777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0724;AVGPOST=0.9984;RSQ=0.9910;ERATE=0.0003;THETA=0.0002;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 77850800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2724;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0005;THETA=0.0005;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 77851057 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8733;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77851100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.947;LDAF=0.1009;AVGPOST=0.9958;RSQ=0.9828;ERATE=0.0004;THETA=0.0003;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 77851110 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.972;LDAF=0.4800;AVGPOST=0.9843;RSQ=0.9781;ERATE=0.0016;THETA=0.0017;AC=1055;AN=2184 GT:DS:GL:BD 0.48305860 0
1 77851212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.439;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3687;ERATE=0.0010;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77851353 . AC A 846 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9261;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77851520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5561;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77851532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.941;LDAF=0.0312;AVGPOST=0.9987;RSQ=0.9803;ERATE=0.0004;THETA=0.0007;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 77851570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77851587 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9789;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77851625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9402;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77851687 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7587;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77851688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77851784 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77851865 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0046;AVGPOST=0.9977;RSQ=0.8220;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77851866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5254;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77852115 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2717;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 77852268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5287;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77852323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0090;AVGPOST=0.9983;RSQ=0.9351;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77852332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4829;AVGPOST=0.9982;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=1057;AN=2184 GT:DS:GL:BD 0.48397437 0
1 77852387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77852455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7685;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77852483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.6182;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77852609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9640;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77852662 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9224;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77852794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.713;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8916;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77852833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.8115;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77852913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9595;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77852997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0809;AVGPOST=0.9993;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 77853098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.6000;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77853299 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5990;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77853405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77853560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77853591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77853620 . A AACCATTATT 6964 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0174;AVGPOST=0.9980;RSQ=0.9573;ERATE=0.0005;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77853909 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77853990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77854071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6447;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77854131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6301;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77854178 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0114;AVGPOST=0.9988;RSQ=0.9642;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77854190 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0815;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77854238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1929;AVGPOST=0.9974;RSQ=0.9930;ERATE=0.0004;THETA=0.0001;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 77854275 . T TG 1141 PASS INDEL;BAVGPOST=0.928;BRSQ=0.578;LDAF=0.0966;AVGPOST=0.9201;RSQ=0.6461;ERATE=0.0114;THETA=0.0005;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 77854331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77854349 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2585;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 77854749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8241;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77854799 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0852;AVGPOST=0.9988;RSQ=0.9940;ERATE=0.0004;THETA=0.0002;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 77854804 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77854808 . CT C 204 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77854837 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77854898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0026;AVGPOST=0.9996;RSQ=0.9384;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77854915 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77854984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77855113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9613;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77855149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.845;LDAF=0.0096;AVGPOST=0.9979;RSQ=0.9234;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77855356 . G GT 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5379;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77855410 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7161;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77855466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7668;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77855475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6503;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77855664 . CT C 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5425;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77855714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6220;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77855842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9274;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77855846 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9149;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77855891 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4490;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77855929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8071;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77856004 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7265;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77856010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0820;AVGPOST=0.9986;RSQ=0.9935;ERATE=0.0004;THETA=0.0005;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 77856060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1015;AVGPOST=0.9981;RSQ=0.9926;ERATE=0.0003;THETA=0.0004;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 77856091 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6764;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77856145 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7863;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77856240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2722;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 77856266 . A AT 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5423;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77856273 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6669;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77856334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8742;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77856344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8441;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77856368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.7017;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77856372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8629;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77856386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9047;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77856467 . GA G 84 PASS INDEL;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5730;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77856583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9064;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77856600 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0113;AVGPOST=0.9985;RSQ=0.9488;ERATE=0.0003;THETA=0.0001;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77856605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0815;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77856739 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0071;AVGPOST=0.9986;RSQ=0.9246;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77856786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7996;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77856804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7846;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77856869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4831;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=1056;AN=2184 GT:DS:GL:BD 0.48351648 0
1 77856931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0123;AVGPOST=0.9992;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77856952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0830;AVGPOST=0.9971;RSQ=0.9853;ERATE=0.0005;THETA=0.0005;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 77856978 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9312;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77857035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6964;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77857049 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0840;AVGPOST=0.9974;RSQ=0.9867;ERATE=0.0007;THETA=0.0003;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 77857071 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.881;LDAF=0.0182;AVGPOST=0.9958;RSQ=0.8970;ERATE=0.0006;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77857073 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.882;LDAF=0.0179;AVGPOST=0.9966;RSQ=0.9203;ERATE=0.0006;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77857075 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.620;LDAF=0.0680;AVGPOST=0.9397;RSQ=0.6062;ERATE=0.0093;THETA=0.0003;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 77857076 . AT A 5005 PASS INDEL;BAVGPOST=0.889;BRSQ=0.694;LDAF=0.2512;AVGPOST=0.8076;RSQ=0.6065;ERATE=0.0349;THETA=0.0004;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 77857104 . ATG A 1954 PASS INDEL;BAVGPOST=0.866;BRSQ=0.471;LDAF=0.1544;AVGPOST=0.8771;RSQ=0.6395;ERATE=0.0090;THETA=0.0004;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 77857106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.808;LDAF=0.2582;AVGPOST=0.9197;RSQ=0.8442;ERATE=0.0078;THETA=0.0003;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 77857132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.852;LDAF=0.1676;AVGPOST=0.8936;RSQ=0.7083;ERATE=0.0147;THETA=0.0002;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 77857149 . TAC T 1448 PASS INDEL;BAVGPOST=0.973;BRSQ=0.824;LDAF=0.0941;AVGPOST=0.9760;RSQ=0.8871;ERATE=0.0020;THETA=0.0002;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 77857156 rs66907899 ATG A 4730 PASS INDEL;BAVGPOST=0.909;BRSQ=0.763;LDAF=0.2502;AVGPOST=0.9268;RSQ=0.8599;ERATE=0.0030;THETA=0.0004;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 77857162 . G GTGTA 15307 PASS INDEL;BAVGPOST=0.916;BRSQ=0.787;LDAF=0.2467;AVGPOST=0.9505;RSQ=0.9027;ERATE=0.0011;THETA=0.0002;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 77857164 rs10625327 G GTATA 4952 PASS INDEL;BAVGPOST=0.892;BRSQ=0.710;LDAF=0.2312;AVGPOST=0.9194;RSQ=0.8360;ERATE=0.0040;THETA=0.0004;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 77857210 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.845;LDAF=0.1853;AVGPOST=0.8923;RSQ=0.7334;ERATE=0.0119;THETA=0.0004;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 77857247 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0038;AVGPOST=0.9975;RSQ=0.7650;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77857375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77857386 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8280;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77857389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77857558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0169;AVGPOST=0.9989;RSQ=0.9711;ERATE=0.0004;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77857630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9769;AVGPOST=0.9994;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=2134;AN=2184 GT:DS:GL:BD 0.97710621 1
1 77857683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7662;AVGPOST=0.9988;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=1675;AN=2184 GT:DS:GL:BD 0.76694137 1
1 77857690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77857750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6573;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77857863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0026;AVGPOST=0.9978;RSQ=0.6790;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77857878 . CTA C 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77857883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7766;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77857899 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1263;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 77857932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77857983 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4826;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=1055;AN=2184 GT:DS:GL:BD 0.48305860 0
1 77857988 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6283;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77858003 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6507;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77858031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0815;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0003;THETA=0.0014;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77858202 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9677;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77858245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9889;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77858258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0061;AVGPOST=0.9971;RSQ=0.7930;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77858298 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7463;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77858381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9167;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77858454 rs79380416 G GT 3039 PASS INDEL;BAVGPOST=0.984;BRSQ=0.908;LDAF=0.0995;AVGPOST=0.9613;RSQ=0.8362;ERATE=0.0079;THETA=0.0003;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 77858545 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77858584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.9110;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77858589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6191;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77858620 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0817;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77858673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9975;RSQ=0.8916;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77858703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1318;AVGPOST=0.9963;RSQ=0.9866;ERATE=0.0005;THETA=0.0007;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 77858729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0540;AVGPOST=0.9978;RSQ=0.9821;ERATE=0.0005;THETA=0.0002;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 77858776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77858845 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4507;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77858856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.999;LDAF=0.2718;AVGPOST=0.9980;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 77858892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0814;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77859048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77859168 . A AT 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5770;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77859228 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9406;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77859257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7051;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77859290 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6055;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77859299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7577;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77859414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8266;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77859606 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9517;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77859645 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.893;LDAF=0.0118;AVGPOST=0.9976;RSQ=0.9129;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77859666 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.905;LDAF=0.0211;AVGPOST=0.9963;RSQ=0.9316;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77859699 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0165;AVGPOST=0.9991;RSQ=0.9742;ERATE=0.0004;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77859700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.892;LDAF=0.0166;AVGPOST=0.9988;RSQ=0.9678;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77859745 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5428;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77859768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77859780 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6984;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77859792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6667;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77859803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0051;AVGPOST=0.9981;RSQ=0.8378;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77859881 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2773;AVGPOST=0.9936;RSQ=0.9867;ERATE=0.0011;THETA=0.0002;AC=607;AN=2184 GT:DS:GL:BD 0.27793041 0
1 77859960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4826;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=1055;AN=2184 GT:DS:GL:BD 0.48305860 0
1 77860040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0167;AVGPOST=0.9996;RSQ=0.9880;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77860119 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77860737 rs72249221 AAGG A 29037 PASS INDEL;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2711;AVGPOST=0.9973;RSQ=0.9942;ERATE=0.0008;THETA=0.0002;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 77860920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0281;AVGPOST=0.9991;RSQ=0.9891;ERATE=0.0003;THETA=0.0009;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77861049 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7252;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77861109 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77861152 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77861156 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77861201 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8875;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77861296 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6654;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77861412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1221;AVGPOST=0.9984;RSQ=0.9945;ERATE=0.0004;THETA=0.0002;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 77861491 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0812;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77861592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1260;AVGPOST=0.9984;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77861595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77861754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7656;AVGPOST=0.9988;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=1673;AN=2184 GT:DS:GL:BD 0.76602566 1
1 77861794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77861810 . ATTC A 822 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0071;AVGPOST=0.9988;RSQ=0.9287;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77861844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6881;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77861973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7494;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77861975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4827;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=1055;AN=2184 GT:DS:GL:BD 0.48305860 0
1 77861996 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77862059 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9593;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77862088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8864;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77862200 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5904;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77862297 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0814;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77862406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77862529 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0811;AVGPOST=0.9994;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77862532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5598;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77862574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9885;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77862624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9219;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77862647 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0809;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 77862687 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77862692 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0440;AVGPOST=0.9974;RSQ=0.9782;ERATE=0.0003;THETA=0.0002;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 77862785 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77862898 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7011;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77863049 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77863056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0791;AVGPOST=0.9988;RSQ=0.9935;ERATE=0.0004;THETA=0.0003;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 77863068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0781;AVGPOST=0.9976;RSQ=0.9889;ERATE=0.0005;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77863172 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77863212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8552;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77863260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77863457 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9984;RSQ=0.9094;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77863569 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77863589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0212;AVGPOST=0.9981;RSQ=0.9659;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77863647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8349;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77863791 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9651;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77863805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5613;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77863816 . A AT 6464 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0823;AVGPOST=0.9976;RSQ=0.9884;ERATE=0.0005;THETA=0.0005;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77863931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7648;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77864098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9771;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=2134;AN=2184 GT:DS:GL:BD 0.97710621 1
1 77864215 rs112960552 TAGAA T 21256 PASS INDEL;BAVGPOST=0.990;BRSQ=0.959;LDAF=0.1270;AVGPOST=0.9974;RSQ=0.9903;ERATE=0.0010;THETA=0.0003;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 77864321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0814;AVGPOST=0.9994;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77864326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0246;AVGPOST=0.9985;RSQ=0.9732;ERATE=0.0004;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77864392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77864393 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0025;AVGPOST=0.9970;RSQ=0.5589;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77864398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6922;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77864493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77864575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7878;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77864594 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77864604 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77864691 . G GA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5413;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77864777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0814;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0004;THETA=0.0008;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77864831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77864954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9587;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77864995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77865140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4827;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0004;THETA=0.0005;AC=1055;AN=2184 GT:DS:GL:BD 0.48305860 0
1 77865180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9431;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77865573 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77865646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2714;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 77865761 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77865771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1293;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 77865880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0816;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77866083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9094;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77866084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77866204 . C CG 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8676;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77866751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9642;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77866761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77866809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6749;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77866840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9715;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77866974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77867129 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2146;AVGPOST=0.9981;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 77867164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77867210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7881;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77867213 . G GA 6538 PASS INDEL;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0819;AVGPOST=0.9982;RSQ=0.9901;ERATE=0.0007;THETA=0.0004;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77867236 . AG A 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77867337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7604;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77867549 . CAT C 120 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6161;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77867661 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9624;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77867681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0038;AVGPOST=0.9964;RSQ=0.6503;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77867705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9982;RSQ=0.4746;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77867717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77867760 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9349;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77867824 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1255;AVGPOST=0.9968;RSQ=0.9902;ERATE=0.0004;THETA=0.0002;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77867876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77867890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5914;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77867897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0213;AVGPOST=0.9962;RSQ=0.9423;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77867911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5586;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77867923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.979;LDAF=0.0840;AVGPOST=0.9963;RSQ=0.9830;ERATE=0.0004;THETA=0.0002;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 77867996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.7552;AVGPOST=0.9870;RSQ=0.9707;ERATE=0.0020;THETA=0.0005;AC=1654;AN=2184 GT:DS:GL:BD 0.75732601 1
1 77868070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.812;LDAF=0.0184;AVGPOST=0.9941;RSQ=0.8708;ERATE=0.0005;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77868123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.910;LDAF=0.1543;AVGPOST=0.9412;RSQ=0.8238;ERATE=0.0044;THETA=0.0039;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 77868129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.922;LDAF=0.3044;AVGPOST=0.9194;RSQ=0.8557;ERATE=0.0066;THETA=0.0012;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 77868155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.523;LDAF=0.0959;AVGPOST=0.9286;RSQ=0.6954;ERATE=0.0038;THETA=0.0004;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 77868188 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0858;AVGPOST=0.9926;RSQ=0.9672;ERATE=0.0006;THETA=0.0026;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 77868284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.943;LDAF=0.0808;AVGPOST=0.9975;RSQ=0.9874;ERATE=0.0005;THETA=0.0029;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 77868601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0840;AVGPOST=0.9952;RSQ=0.9752;ERATE=0.0005;THETA=0.0010;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 77869299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0128;AVGPOST=0.9946;RSQ=0.8466;ERATE=0.0007;THETA=0.0048;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77869463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.932;LDAF=0.2061;AVGPOST=0.9749;RSQ=0.9431;ERATE=0.0016;THETA=0.0005;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 77869573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0021;AVGPOST=0.9972;RSQ=0.4106;ERATE=0.0008;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77869657 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.943;LDAF=0.3566;AVGPOST=0.9577;RSQ=0.9301;ERATE=0.0090;THETA=0.0042;AC=779;AN=2184 GT:DS:GL:BD 0.35668498 0
1 77869868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0810;AVGPOST=0.9987;RSQ=0.9935;ERATE=0.0004;THETA=0.0096;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 77869869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77869915 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8194;ERATE=0.0006;THETA=0.0144;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77870002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9264;ERATE=0.0003;THETA=0.0020;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77870008 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0898;AVGPOST=0.9961;RSQ=0.9825;ERATE=0.0003;THETA=0.0013;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 77870011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.955;LDAF=0.4315;AVGPOST=0.9703;RSQ=0.9555;ERATE=0.0026;THETA=0.0046;AC=936;AN=2184 GT:DS:GL:BD 0.42857143 0
1 77870012 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.974;LDAF=0.0891;AVGPOST=0.9950;RSQ=0.9786;ERATE=0.0003;THETA=0.0031;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 77870018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77870026 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77870085 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5826;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77870095 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77870133 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2784;AVGPOST=0.9914;RSQ=0.9839;ERATE=0.0009;THETA=0.0106;AC=604;AN=2184 GT:DS:GL:BD 0.27655679 0
1 77870149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1044;AVGPOST=0.9978;RSQ=0.9903;ERATE=0.0004;THETA=0.0016;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 77870324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0956;AVGPOST=0.9976;RSQ=0.9886;ERATE=0.0006;THETA=0.0008;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 77870349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8907;ERATE=0.0003;THETA=0.0046;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77870356 . TC T 148 PASS INDEL;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0071;AVGPOST=0.9986;RSQ=0.9208;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77870357 . CT C 1097 PASS INDEL;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9597;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77870482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0830;AVGPOST=0.9990;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 77870775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77870804 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8875;ERATE=0.0003;THETA=0.0110;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77870868 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77870903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77870984 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7030;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77871041 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77871055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77871084 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0837;AVGPOST=0.9983;RSQ=0.9911;ERATE=0.0004;THETA=0.0015;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 77871140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0858;AVGPOST=0.9966;RSQ=0.9849;ERATE=0.0003;THETA=0.0003;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 77871277 . T TC 11539 PASS INDEL;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.0918;AVGPOST=0.9983;RSQ=0.9912;ERATE=0.0006;THETA=0.0005;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 77871305 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0866;AVGPOST=0.9986;RSQ=0.9930;ERATE=0.0003;THETA=0.0043;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 77871360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.9753;AVGPOST=0.9986;RSQ=0.9774;ERATE=0.0005;THETA=0.0005;AC=2131;AN=2184 GT:DS:GL:BD 0.97573262 1
1 77871374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.9755;AVGPOST=0.9986;RSQ=0.9802;ERATE=0.0003;THETA=0.0005;AC=2131;AN=2184 GT:DS:GL:BD 0.97573262 1
1 77871462 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8111;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77871502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.8862;AVGPOST=0.9941;RSQ=0.9782;ERATE=0.0016;THETA=0.0023;AC=1938;AN=2184 GT:DS:GL:BD 0.88736266 1
1 77871540 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5918;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77871558 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8365;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77871564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77871618 . C CTG 13307 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0913;AVGPOST=0.9978;RSQ=0.9884;ERATE=0.0008;THETA=0.0005;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 77871707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0896;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 77871734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77871789 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7660;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77871803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0468;AVGPOST=0.9979;RSQ=0.9815;ERATE=0.0005;THETA=0.0007;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 77871809 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.589;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6630;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77871840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0894;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 77871923 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8881;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77871949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8473;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77872116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9603;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77872135 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8639;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77872142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0851;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0009;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 77872178 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77872197 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77872273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77872296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0854;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77872388 . AG A 1409 PASS INDEL;BAVGPOST=0.986;BRSQ=0.917;LDAF=0.0801;AVGPOST=0.9833;RSQ=0.9210;ERATE=0.0024;THETA=0.0004;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 77872390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.927;LDAF=0.0865;AVGPOST=0.9890;RSQ=0.9487;ERATE=0.0013;THETA=0.0003;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77872900 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5951;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77872969 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9437;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77873038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9482;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77873045 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7060;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77873097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9250;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77873098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0856;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0004;THETA=0.0006;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77873120 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7885;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77873126 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6168;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77873216 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5833;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77873246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0851;AVGPOST=0.9985;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77873271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0856;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77873324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0858;AVGPOST=0.9990;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77873359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77873405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0812;AVGPOST=0.9980;RSQ=0.9903;ERATE=0.0004;THETA=0.0003;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 77873472 . TC T 270 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0002;AVGPOST=0.9998;RSQ=0.1225;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77873488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0857;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0004;THETA=0.0006;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77873602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77873608 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77873779 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0856;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77873878 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0864;AVGPOST=0.9985;RSQ=0.9928;ERATE=0.0004;THETA=0.0005;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 77873901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8852;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77874010 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0855;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77874023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0854;AVGPOST=0.9975;RSQ=0.9904;ERATE=0.0004;THETA=0.0002;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77874088 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0858;AVGPOST=0.9989;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77874141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77874156 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77874206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6907;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77874214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0057;AVGPOST=0.9934;RSQ=0.6236;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77874235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8743;AVGPOST=0.9973;RSQ=0.9917;ERATE=0.0006;THETA=0.0008;AC=1911;AN=2184 GT:DS:GL:BD 0.87500000 1
1 77874259 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8756;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77874271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8751;AVGPOST=0.9973;RSQ=0.9906;ERATE=0.0007;THETA=0.0002;AC=1913;AN=2184 GT:DS:GL:BD 0.87591577 1
1 77874330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9607;AVGPOST=0.9988;RSQ=0.9880;ERATE=0.0004;THETA=0.0003;AC=2098;AN=2184 GT:DS:GL:BD 0.96062273 1
1 77874359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.9609;AVGPOST=0.9991;RSQ=0.9902;ERATE=0.0004;THETA=0.0004;AC=2099;AN=2184 GT:DS:GL:BD 0.96108061 1
1 77874368 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77874558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2818;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0004;THETA=0.0002;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 77874608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6400;AVGPOST=0.9955;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=1395;AN=2184 GT:DS:GL:BD 0.63873625 1
1 77874614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9532;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77874636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3206;AVGPOST=0.9941;RSQ=0.9904;ERATE=0.0005;THETA=0.0004;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 77874664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2354;AVGPOST=0.9955;RSQ=0.9917;ERATE=0.0005;THETA=0.0003;AC=516;AN=2184 GT:DS:GL:BD 0.23626374 0
1 77874676 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8683;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77874702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6792;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0005;THETA=0.0003;AC=1483;AN=2184 GT:DS:GL:BD 0.67902929 1
1 77874722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6070;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77874727 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2819;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 77874740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77874952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6786;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77874960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2827;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0004;THETA=0.0005;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 77875010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77875178 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77875227 . G GT 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77875504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0093;AVGPOST=0.9988;RSQ=0.9481;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77875749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0131;AVGPOST=0.9994;RSQ=0.9791;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77875793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7126;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77875880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5470;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77875902 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=0.9995;RSQ=0.9827;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77875907 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7023;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77875955 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.765;LDAF=0.0048;AVGPOST=0.9980;RSQ=0.8200;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77875956 . TTTG T 17 PASS INDEL;BAVGPOST=0.996;BRSQ=0.536;LDAF=0.0119;AVGPOST=0.9857;RSQ=0.5247;ERATE=0.0026;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77875977 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5777;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77876153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.6741;AVGPOST=0.9935;RSQ=0.9895;ERATE=0.0005;THETA=0.0001;AC=1472;AN=2184 GT:DS:GL:BD 0.67399269 1
1 77876170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0545;AVGPOST=0.9975;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 77876270 rs57512332 GTGTTTT G 60286 PASS INDEL;BAVGPOST=0.989;BRSQ=0.976;LDAF=0.6670;AVGPOST=0.9730;RSQ=0.9538;ERATE=0.0038;THETA=0.0004;AC=1467;AN=2184 GT:DS:GL:BD 0.67170328 1
1 77876353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2821;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 77876406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5938;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=1295;AN=2184 GT:DS:GL:BD 0.59294873 1
1 77876536 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77876788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77876797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77876827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77876896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0857;AVGPOST=0.9994;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77877100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77877110 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77877313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.1452;ERATE=0.0004;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77877320 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8680;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77877330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6501;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77877496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6260;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77877504 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8720;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77877554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6471;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77877605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7719;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77877697 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77877706 . G GA 201 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77877894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7390;ERATE=0.0009;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77878034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0106;AVGPOST=0.9996;RSQ=0.9827;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77878131 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.9001;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77878142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77878221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.7124;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77878225 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8075;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77878309 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77878311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77878372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77878407 . GT G 62 PASS INDEL;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.6060;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77878474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77878487 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7332;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77878517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77878520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77878523 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77878531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77878601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3501;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 77878620 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77878621 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77878805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8284;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77878879 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5873;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77878910 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8889;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77878934 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77878994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77879009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77879195 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5465;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77879310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9725;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77879503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77879557 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77879695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5491;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77879731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77879768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77879827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1515;AVGPOST=0.9991;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 77879883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7573;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77879908 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8303;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77879926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9076;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77879927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77880042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6286;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77880140 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77880168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1416;AVGPOST=0.9966;RSQ=0.9893;ERATE=0.0006;THETA=0.0004;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 77880188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7720;AVGPOST=0.9985;RSQ=0.9966;ERATE=0.0005;THETA=0.0003;AC=1687;AN=2184 GT:DS:GL:BD 0.77243590 1
1 77880193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77880234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8202;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77880266 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0038;AVGPOST=0.9980;RSQ=0.8015;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77880321 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7804;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77880369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2751;AVGPOST=0.9973;RSQ=0.9948;ERATE=0.0004;THETA=0.0002;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 77880386 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0108;AVGPOST=0.9981;RSQ=0.9236;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77880390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.5609;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77880430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0039;AVGPOST=0.9977;RSQ=0.7578;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77880438 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2804;AVGPOST=0.9970;RSQ=0.9940;ERATE=0.0009;THETA=0.0004;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 77880567 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7547;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77880568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6675;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77880658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77880738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77880786 . C CA 44 PASS INDEL;BAVGPOST=0.992;BRSQ=0.568;LDAF=0.0192;AVGPOST=0.9782;RSQ=0.5455;ERATE=0.0065;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77880803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77880809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9634;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77880930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2821;AVGPOST=0.9973;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 77881032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5429;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77881129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77881236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77881331 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9731;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77881343 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8859;ERATE=0.0007;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77881576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77881769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0759;AVGPOST=0.9984;RSQ=0.9922;ERATE=0.0003;THETA=0.0004;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 77881774 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.795;LDAF=0.0094;AVGPOST=0.9952;RSQ=0.8007;ERATE=0.0012;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77881903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8452;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77881969 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77882045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7617;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77882104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.0966;ERATE=0.0004;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77882105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.6046;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77882145 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0462;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0006;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 77882150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77882372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77882399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8258;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77882457 . TG T 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4210;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77882601 . G GT 270 PASS INDEL;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7356;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77882629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8647;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77882709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77882759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8693;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77882941 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9402;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77882977 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77883096 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77883244 . GA G 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5052;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77883412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1225;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0004;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 77883640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0180;AVGPOST=0.9977;RSQ=0.9573;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77883671 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1242;AVGPOST=0.9991;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 77883895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77883948 . GA G 165 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0005;AVGPOST=0.9989;RSQ=0.1991;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77883984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77883985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.830;LDAF=0.0154;AVGPOST=0.9980;RSQ=0.9486;ERATE=0.0004;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77884033 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9983;RSQ=0.9068;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77884056 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4662;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77884057 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9028;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77884130 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6328;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0005;THETA=0.0003;AC=1381;AN=2184 GT:DS:GL:BD 0.63232601 1
1 77884283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9914;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77884294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5725;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77884322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.965;LDAF=0.0462;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 77884470 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.7758;AVGPOST=0.9975;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=1694;AN=2184 GT:DS:GL:BD 0.77564102 1
1 77884472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.956;LDAF=0.1389;AVGPOST=0.9967;RSQ=0.9886;ERATE=0.0004;THETA=0.0004;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 77884473 rs5775397 C CG 11396 PASS INDEL;BAVGPOST=0.988;BRSQ=0.954;LDAF=0.1399;AVGPOST=0.9948;RSQ=0.9832;ERATE=0.0006;THETA=0.0003;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 77884514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.980;LDAF=0.2816;AVGPOST=0.9960;RSQ=0.9918;ERATE=0.0007;THETA=0.0006;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 77884528 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0531;AVGPOST=0.9994;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 77884607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9863;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77884712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0765;AVGPOST=0.9984;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 77884969 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77885099 . G GA 9273 PASS INDEL;BAVGPOST=0.993;BRSQ=0.965;LDAF=0.0978;AVGPOST=0.9978;RSQ=0.9899;ERATE=0.0003;THETA=0.0003;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 77885101 . A AC 348 PASS INDEL;BAVGPOST=0.962;BRSQ=0.789;LDAF=0.0952;AVGPOST=0.9891;RSQ=0.9520;ERATE=0.0008;THETA=0.0003;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 77885115 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77885137 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77885157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.2844;AVGPOST=0.9837;RSQ=0.9733;ERATE=0.0044;THETA=0.0002;AC=607;AN=2184 GT:DS:GL:BD 0.27793041 0
1 77885198 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7785;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0005;THETA=0.0009;AC=1700;AN=2184 GT:DS:GL:BD 0.77838826 1
1 77885242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7109;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77885247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6878;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77885276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77885282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8784;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=1919;AN=2184 GT:DS:GL:BD 0.87866300 1
1 77885307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77885315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7784;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=1700;AN=2184 GT:DS:GL:BD 0.77838826 1
1 77885368 rs34854145 GA G 82016 PASS INDEL;BAVGPOST=0.986;BRSQ=0.964;LDAF=0.7787;AVGPOST=0.9958;RSQ=0.9912;ERATE=0.0007;THETA=0.0002;AC=1700;AN=2184 GT:DS:GL:BD 0.77838826 1
1 77885371 . AG A 13370 PASS INDEL;BAVGPOST=0.928;BRSQ=0.853;LDAF=0.6922;AVGPOST=0.8783;RSQ=0.7933;ERATE=0.0289;THETA=0.0003;AC=1576;AN=2184 GT:DS:GL:BD 0.72161174 1
1 77885457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4967;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77885512 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0016;AVGPOST=0.9974;RSQ=0.4298;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77885559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8111;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77885582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77885624 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5114;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77885657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1405;AVGPOST=0.9987;RSQ=0.9952;ERATE=0.0005;THETA=0.0003;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 77885693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77885873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8080;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77885947 . TTAAAA T 174 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6249;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77886071 . G GA 47 PASS INDEL;BAVGPOST=0.989;BRSQ=0.656;LDAF=0.0261;AVGPOST=0.9739;RSQ=0.5778;ERATE=0.0048;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77886118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5825;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77886130 rs66532354 CA C 12579 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1232;AVGPOST=0.9986;RSQ=0.9940;ERATE=0.0008;THETA=0.0003;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 77886339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9219;AVGPOST=0.9988;RSQ=0.9930;ERATE=0.0004;THETA=0.0005;AC=2013;AN=2184 GT:DS:GL:BD 0.92170328 1
1 77886446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6622;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77886455 . AC A 6255 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0464;AVGPOST=0.9995;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 77886499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3505;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 77886570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9747;AVGPOST=0.9989;RSQ=0.9835;ERATE=0.0004;THETA=0.0003;AC=2129;AN=2184 GT:DS:GL:BD 0.97481686 1
1 77886578 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0090;AVGPOST=0.9969;RSQ=0.8736;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77886762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7432;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77886893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77887066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9633;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77887071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77887089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0768;AVGPOST=0.9994;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 77887094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0440;AVGPOST=0.9985;RSQ=0.9857;ERATE=0.0003;THETA=0.0002;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 77887622 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77887698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9277;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77887773 . CA C 415 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9381;ERATE=0.0003;THETA=0.0019;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77887816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6334;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77887835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3551;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0004;THETA=0.0006;AC=773;AN=2184 GT:DS:GL:BD 0.35393772 0
1 77887861 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0255;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0003;THETA=0.0008;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 77887867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0073;AVGPOST=0.9973;RSQ=0.8656;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77888007 . CA C 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5554;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77888038 . AC A 4246 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0188;AVGPOST=0.9983;RSQ=0.9667;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77888124 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77888196 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 77888212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77888213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77888419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77888593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0132;AVGPOST=0.9992;RSQ=0.9735;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77888621 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77888797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0051;AVGPOST=0.9981;RSQ=0.8247;ERATE=0.0007;THETA=0.0042;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77888823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.946;LDAF=0.2727;AVGPOST=0.9740;RSQ=0.9541;ERATE=0.0027;THETA=0.0005;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 77888845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0074;AVGPOST=0.9947;RSQ=0.7107;ERATE=0.0008;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77888885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0044;AVGPOST=0.9959;RSQ=0.6312;ERATE=0.0008;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77888903 . CTAAAAAAAAAAA C 7411 PASS INDEL;BAVGPOST=0.966;BRSQ=0.837;LDAF=0.1000;AVGPOST=0.9799;RSQ=0.9118;ERATE=0.0013;THETA=0.0002;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 77888915 . AT A 29140 PASS INDEL;BAVGPOST=0.967;BRSQ=0.838;LDAF=0.8741;AVGPOST=0.9347;RSQ=0.7792;ERATE=0.0080;THETA=0.0003;AC=1945;AN=2184 GT:DS:GL:BD 0.89056778 1
1 77888916 rs67068878 T TA 8116 PASS INDEL;BAVGPOST=0.894;BRSQ=0.624;LDAF=0.7779;AVGPOST=0.7995;RSQ=0.5366;ERATE=0.0166;THETA=0.0004;AC=1804;AN=2184 GT:DS:GL:BD 0.82600731 1
1 77889069 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9219;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0003;THETA=0.0003;AC=2013;AN=2184 GT:DS:GL:BD 0.92170328 1
1 77889075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77889093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77889103 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77889193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77889355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77889384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0962;AVGPOST=0.9985;RSQ=0.9939;ERATE=0.0004;THETA=0.0003;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 77889505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9216;AVGPOST=0.9994;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=2013;AN=2184 GT:DS:GL:BD 0.92170328 1
1 77889513 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0964;AVGPOST=0.9985;RSQ=0.9935;ERATE=0.0003;THETA=0.0002;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 77889675 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7499;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77889761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0961;AVGPOST=0.9992;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 77889762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6091;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77889820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0051;AVGPOST=0.9994;RSQ=0.9450;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77889862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77889917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77889945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9501;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77890022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.9207;AVGPOST=0.9976;RSQ=0.9873;ERATE=0.0006;THETA=0.0003;AC=2012;AN=2184 GT:DS:GL:BD 0.92124540 1
1 77890207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9218;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0035;AC=2013;AN=2184 GT:DS:GL:BD 0.92170328 1
1 77890230 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77890421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.9803;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=2141;AN=2184 GT:DS:GL:BD 0.98031133 1
1 77890491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77890654 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9241;AVGPOST=0.9953;RSQ=0.9730;ERATE=0.0008;THETA=0.0003;AC=2021;AN=2184 GT:DS:GL:BD 0.92536628 1
1 77890732 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7742;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77890733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0115;AVGPOST=0.9951;RSQ=0.8306;ERATE=0.0005;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77890734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0252;AVGPOST=0.9988;RSQ=0.9821;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 77890739 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77890849 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5917;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77890937 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4694;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77890981 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.1098;AVGPOST=0.9953;RSQ=0.9828;ERATE=0.0005;THETA=0.0003;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 77890989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9182;AVGPOST=0.9951;RSQ=0.9749;ERATE=0.0006;THETA=0.0012;AC=2009;AN=2184 GT:DS:GL:BD 0.91987181 1
1 77891204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9970;RSQ=0.9018;ERATE=0.0006;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77891299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9272;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0003;THETA=0.0027;AC=2025;AN=2184 GT:DS:GL:BD 0.92719781 1
1 77891391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77891410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6329;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77891442 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8065;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77891521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0035;AVGPOST=0.9969;RSQ=0.7015;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77891778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.589;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.4640;ERATE=0.0009;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77891832 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6613;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77891935 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77891967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.559;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8452;ERATE=0.0005;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77891996 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9612;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77892071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2887;AVGPOST=0.9957;RSQ=0.9913;ERATE=0.0004;THETA=0.0003;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 77892090 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9074;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77892199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8286;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77892274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.9270;AVGPOST=0.9989;RSQ=0.9935;ERATE=0.0005;THETA=0.0066;AC=2025;AN=2184 GT:DS:GL:BD 0.92719781 1
1 77892405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77892412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77892638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77892724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8607;ERATE=0.0005;THETA=0.0081;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77892725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5756;ERATE=0.0003;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77892846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6595;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77893061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5308;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77893114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0029;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77893213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.8965;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77893313 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.0819;AVGPOST=0.9966;RSQ=0.9830;ERATE=0.0003;THETA=0.0008;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77893404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77893459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77893465 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0094;AVGPOST=0.9993;RSQ=0.9705;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77893610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77893674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0635;AVGPOST=0.9971;RSQ=0.9825;ERATE=0.0003;THETA=0.0003;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 77893822 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9774;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77893932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0482;AVGPOST=0.9991;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 77893987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2291;AVGPOST=0.9973;RSQ=0.9937;ERATE=0.0004;THETA=0.0005;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 77894033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0283;AVGPOST=0.9990;RSQ=0.9888;ERATE=0.0003;THETA=0.0007;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77894043 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9228;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77894350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0032;AVGPOST=0.9964;RSQ=0.5730;ERATE=0.0006;THETA=0.0042;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77894378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.966;LDAF=0.9180;AVGPOST=0.9892;RSQ=0.9506;ERATE=0.0007;THETA=0.0004;AC=2012;AN=2184 GT:DS:GL:BD 0.92124540 1
1 77894440 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0974;AVGPOST=0.9926;RSQ=0.9682;ERATE=0.0007;THETA=0.0003;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 77894648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.884;LDAF=0.0701;AVGPOST=0.9687;RSQ=0.8255;ERATE=0.0042;THETA=0.0053;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 77894745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7667;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77894794 . A AT 152 PASS INDEL;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0046;AVGPOST=0.9965;RSQ=0.6982;ERATE=0.0005;THETA=0.0022;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77895166 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77895214 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9097;ERATE=0.0003;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77895236 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9594;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77895297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5594;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77895304 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0976;AVGPOST=0.9964;RSQ=0.9861;ERATE=0.0008;THETA=0.0006;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 77895330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.9769;AVGPOST=0.9989;RSQ=0.9830;ERATE=0.0004;THETA=0.0044;AC=2134;AN=2184 GT:DS:GL:BD 0.97710621 1
1 77895361 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0285;AVGPOST=0.9994;RSQ=0.9905;ERATE=0.0003;THETA=0.0022;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77895379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.851;LDAF=0.0164;AVGPOST=0.9929;RSQ=0.8264;ERATE=0.0011;THETA=0.0019;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77895386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.470;LDAF=0.0035;AVGPOST=0.9978;RSQ=0.7307;ERATE=0.0005;THETA=0.0030;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77895410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.9126;AVGPOST=0.9932;RSQ=0.9673;ERATE=0.0007;THETA=0.0027;AC=1997;AN=2184 GT:DS:GL:BD 0.91437727 1
1 77895443 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.9197;AVGPOST=0.9945;RSQ=0.9740;ERATE=0.0003;THETA=0.0003;AC=2010;AN=2184 GT:DS:GL:BD 0.92032969 1
1 77895474 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6707;ERATE=0.0003;THETA=0.0084;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77895476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77895517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.7723;AVGPOST=0.9930;RSQ=0.9851;ERATE=0.0005;THETA=0.0056;AC=1690;AN=2184 GT:DS:GL:BD 0.77380955 1
1 77895524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77895554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.3708;AVGPOST=0.9902;RSQ=0.9851;ERATE=0.0011;THETA=0.0078;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 77895669 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0161;AVGPOST=0.9997;RSQ=0.9922;ERATE=0.0003;THETA=0.0035;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77895672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0083;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77895696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0156;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77895705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.6758;AVGPOST=0.9873;RSQ=0.9804;ERATE=0.0013;THETA=0.0142;AC=1476;AN=2184 GT:DS:GL:BD 0.67582417 1
1 77895743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7393;ERATE=0.0003;THETA=0.0084;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77895796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0396;AVGPOST=0.9989;RSQ=0.9890;ERATE=0.0003;THETA=0.0083;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 77895836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0004;THETA=0.0158;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77895866 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8394;ERATE=0.0003;THETA=0.0088;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77895958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.951;LDAF=0.3961;AVGPOST=0.9597;RSQ=0.9424;ERATE=0.0222;THETA=0.0120;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 77895960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6646;ERATE=0.0003;THETA=0.0246;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77895974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77896080 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.973;LDAF=0.2440;AVGPOST=0.9870;RSQ=0.9736;ERATE=0.0012;THETA=0.0107;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 77896086 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0078;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77896184 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9677;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77896209 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.904;LDAF=0.0084;AVGPOST=0.9989;RSQ=0.9515;ERATE=0.0003;THETA=0.0136;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77896227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.9824;AVGPOST=0.9973;RSQ=0.9492;ERATE=0.0004;THETA=0.0036;AC=2148;AN=2184 GT:DS:GL:BD 0.98351645 1
1 77896292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77896312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77896355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1155;AVGPOST=0.9952;RSQ=0.9795;ERATE=0.0003;THETA=0.0014;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 77896369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0004;THETA=0.0060;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77896372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0037;AVGPOST=0.9985;RSQ=0.8404;ERATE=0.0003;THETA=0.0043;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77896467 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.6043;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77896515 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0026;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 77896529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77896554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.951;LDAF=0.0242;AVGPOST=0.9982;RSQ=0.9695;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77896594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6419;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77896599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77896683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77896687 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0058;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77896721 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5960;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77896809 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3150;AVGPOST=0.9958;RSQ=0.9925;ERATE=0.0005;THETA=0.0017;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 77896870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0063;AVGPOST=0.9986;RSQ=0.9128;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77896931 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77896934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3668;AVGPOST=0.9929;RSQ=0.9884;ERATE=0.0004;THETA=0.0006;AC=799;AN=2184 GT:DS:GL:BD 0.36584249 0
1 77897035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77897052 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77897160 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77897180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8255;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77897219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7986;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77897238 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1059;AVGPOST=0.9985;RSQ=0.9938;ERATE=0.0004;THETA=0.0004;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 77897279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5429;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77897337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0293;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 77897437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9361;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77897438 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8879;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77897445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9341;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77897491 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7853;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77897666 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7364;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77897688 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1626;AVGPOST=0.9984;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 77897713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.1058;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 77897715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5888;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77897752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8124;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77897760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.915;LDAF=0.0248;AVGPOST=0.9952;RSQ=0.9280;ERATE=0.0004;THETA=0.0001;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 77897841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7296;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77897845 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1058;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 77897860 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1496;AVGPOST=0.9975;RSQ=0.9925;ERATE=0.0005;THETA=0.0006;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 77897915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6963;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77897928 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77898000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0062;AVGPOST=0.9987;RSQ=0.9280;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77898284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77898430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8990;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77898529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7096;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77898551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77898610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 77898854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8508;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77898963 rs35126601 A ATT 146258 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9539;AVGPOST=0.9990;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=2084;AN=2184 GT:DS:GL:BD 0.95421243 1
1 77899006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5134;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77899117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0064;AVGPOST=0.9969;RSQ=0.8227;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77899176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.603;LDAF=0.0046;AVGPOST=0.9936;RSQ=0.4831;ERATE=0.0027;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77899275 . TC T 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5963;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77899297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.8075;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77899333 . A AC 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6948;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77899379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9993;RSQ=0.9584;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77899479 rs71952893 GTTCAT G 14614 PASS INDEL;BAVGPOST=0.993;BRSQ=0.973;LDAF=0.1503;AVGPOST=0.9957;RSQ=0.9857;ERATE=0.0005;THETA=0.0005;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 77899640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.979;LDAF=0.1652;AVGPOST=0.9920;RSQ=0.9761;ERATE=0.0012;THETA=0.0002;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 77899648 . TAA T 161 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.8111;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77899667 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0493;AVGPOST=0.9963;RSQ=0.9698;ERATE=0.0004;THETA=0.0008;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 77899817 . A ATAAAC 200 PASS INDEL;BAVGPOST=0.990;BRSQ=0.475;LDAF=0.0260;AVGPOST=0.9661;RSQ=0.4773;ERATE=0.0044;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77899837 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0216;AVGPOST=0.9993;RSQ=0.9859;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77899880 . T TTC 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5031;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77899914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7770;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77899948 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7745;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77899996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9478;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77900050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.9848;AVGPOST=0.9997;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 77900058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8443;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77900104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0202;AVGPOST=0.9997;RSQ=0.9943;ERATE=0.0003;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 77900175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0659;AVGPOST=0.9985;RSQ=0.9910;ERATE=0.0003;THETA=0.0003;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 77900266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0650;AVGPOST=0.9994;RSQ=0.9956;ERATE=0.0003;THETA=0.0008;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 77900399 . A AG 54 PASS INDEL;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0042;AVGPOST=0.9952;RSQ=0.5308;ERATE=0.0023;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77900448 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0739;AVGPOST=0.9956;RSQ=0.9757;ERATE=0.0004;THETA=0.0003;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 77900488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1065;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0003;THETA=0.0006;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 77900496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0202;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 77900539 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1189;AVGPOST=0.9974;RSQ=0.9908;ERATE=0.0004;THETA=0.0005;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 77900592 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8687;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77900625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77900886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77900893 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77900917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7048;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77901097 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.829;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9291;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77901104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1066;AVGPOST=0.9989;RSQ=0.9951;ERATE=0.0005;THETA=0.0006;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 77901202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1067;AVGPOST=0.9992;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 77901268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.775;LDAF=0.9597;AVGPOST=0.9685;RSQ=0.7013;ERATE=0.0020;THETA=0.0002;AC=2113;AN=2184 GT:DS:GL:BD 0.96749085 1
1 77901290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6089;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77901303 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.610;LDAF=0.0064;AVGPOST=0.9932;RSQ=0.5713;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77901397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5223;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77901495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0072;AVGPOST=0.9963;RSQ=0.7955;ERATE=0.0006;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77901545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.910;LDAF=0.0192;AVGPOST=0.9958;RSQ=0.9157;ERATE=0.0003;THETA=0.0001;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77901660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.8087;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77901669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0077;AVGPOST=0.9977;RSQ=0.8813;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77901671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0072;AVGPOST=0.9962;RSQ=0.8031;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77901747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4792;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77901882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9743;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77901940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6447;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77901946 . AT A 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4099;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77902029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9822;AVGPOST=0.9975;RSQ=0.9560;ERATE=0.0004;THETA=0.0002;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 77902052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4626;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77902195 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.628;LDAF=0.0100;AVGPOST=0.9972;RSQ=0.8861;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77902311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0226;AVGPOST=0.9960;RSQ=0.9374;ERATE=0.0006;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77902409 . ATTTG A 263 PASS INDEL;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6125;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77902457 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7479;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77902941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1522;AVGPOST=0.9964;RSQ=0.9875;ERATE=0.0006;THETA=0.0004;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 77902981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1369;AVGPOST=0.9965;RSQ=0.9877;ERATE=0.0004;THETA=0.0002;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 77903224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7663;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77903362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.9835;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0010;AC=2148;AN=2184 GT:DS:GL:BD 0.98351645 1
1 77903366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.9831;AVGPOST=0.9990;RSQ=0.9767;ERATE=0.0003;THETA=0.0009;AC=2148;AN=2184 GT:DS:GL:BD 0.98351645 1
1 77903542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7962;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77903589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5851;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77903610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7349;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77903611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1498;AVGPOST=0.9971;RSQ=0.9910;ERATE=0.0005;THETA=0.0002;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 77903685 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5778;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77903816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4243;AVGPOST=0.9929;RSQ=0.9892;ERATE=0.0009;THETA=0.0003;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 77903925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4251;AVGPOST=0.9945;RSQ=0.9912;ERATE=0.0009;THETA=0.0002;AC=930;AN=2184 GT:DS:GL:BD 0.42582417 0
1 77904033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.777;LDAF=0.0069;AVGPOST=0.9975;RSQ=0.8361;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77904267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77904320 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5790;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77904435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0462;AVGPOST=0.9977;RSQ=0.9795;ERATE=0.0004;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 77904451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4263;AVGPOST=0.9965;RSQ=0.9943;ERATE=0.0006;THETA=0.0007;AC=932;AN=2184 GT:DS:GL:BD 0.42673993 0
1 77904625 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1072;AVGPOST=0.9980;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 77904628 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8358;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77904709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9773;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77904829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8898;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77904845 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.947;LDAF=0.0408;AVGPOST=0.9951;RSQ=0.9581;ERATE=0.0003;THETA=0.0016;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 77904937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77905395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77905401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5433;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77905445 . G GTATGTA 191 PASS INDEL;BAVGPOST=0.990;BRSQ=0.252;LDAF=0.0485;AVGPOST=0.9237;RSQ=0.3540;ERATE=0.0032;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77905462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2710;AVGPOST=0.9937;RSQ=0.9874;ERATE=0.0006;THETA=0.0010;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 77905469 . G GTA 406 PASS INDEL;BAVGPOST=0.998;BRSQ=0.731;LDAF=0.0068;AVGPOST=0.9944;RSQ=0.6747;ERATE=0.0007;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77905737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77905780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0067;AVGPOST=0.9987;RSQ=0.9286;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77905814 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.953;LDAF=0.0357;AVGPOST=0.9954;RSQ=0.9508;ERATE=0.0003;THETA=0.0008;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 77905866 . TCTCA T 266 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7585;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77905868 . TCA T 10412 PASS INDEL;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0477;AVGPOST=0.9962;RSQ=0.9706;ERATE=0.0003;THETA=0.0002;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 77905974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0120;AVGPOST=0.9978;RSQ=0.9318;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77906233 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1066;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 77906372 . C CT 89 PASS INDEL;BAVGPOST=0.985;BRSQ=0.589;LDAF=0.0316;AVGPOST=0.9658;RSQ=0.5655;ERATE=0.0072;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77906437 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.865;LDAF=0.7171;AVGPOST=0.9016;RSQ=0.8105;ERATE=0.0475;THETA=0.0004;AC=1602;AN=2184 GT:DS:GL:BD 0.73351645 1
1 77906476 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5535;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77906612 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7177;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77906622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.627;LDAF=0.0014;AVGPOST=0.9973;RSQ=0.3549;ERATE=0.0005;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77906626 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.924;LDAF=0.0459;AVGPOST=0.9930;RSQ=0.9365;ERATE=0.0005;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 77906676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.854;LDAF=0.0365;AVGPOST=0.9904;RSQ=0.8887;ERATE=0.0004;THETA=0.0004;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 77906724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1367;AVGPOST=0.9955;RSQ=0.9843;ERATE=0.0005;THETA=0.0014;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 77906817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9009;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77906818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0047;AVGPOST=0.9973;RSQ=0.7814;ERATE=0.0013;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77906850 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8086;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77906862 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77906911 . GT G 5637 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0417;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 77906927 . CATT C 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77907038 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8409;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77907046 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7801;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77907065 . TC T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4737;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77907066 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8241;ERATE=0.0004;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77907187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77907404 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1065;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0012;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 77907421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77907453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8446;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77907459 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5372;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77907506 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6799;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77907518 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5509;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77907614 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1077;AVGPOST=0.9983;RSQ=0.9926;ERATE=0.0003;THETA=0.0011;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 77907821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0067;AVGPOST=0.9967;RSQ=0.8181;ERATE=0.0006;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77907933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77907942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1006;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 77907995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5485;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77908161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0367;AVGPOST=0.9996;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 77908229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0295;AVGPOST=0.9985;RSQ=0.9832;ERATE=0.0003;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 77908333 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0036;AVGPOST=0.9999;RSQ=0.9826;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77908408 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1005;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0004;THETA=0.0007;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 77908516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6773;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77908539 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8482;ERATE=0.0003;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77908586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77908617 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4449;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77908648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77908738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77908985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.3221;AVGPOST=0.9910;RSQ=0.9830;ERATE=0.0006;THETA=0.0181;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 77908996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0367;AVGPOST=0.9995;RSQ=0.9940;ERATE=0.0003;THETA=0.0108;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 77909053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77909061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0081;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77909363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.894;LDAF=0.0564;AVGPOST=0.9906;RSQ=0.9366;ERATE=0.0005;THETA=0.0027;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 77909384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.694;LDAF=0.0036;AVGPOST=0.9965;RSQ=0.6018;ERATE=0.0007;THETA=0.0078;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77909386 rs5775399 GT G 107 PASS INDEL;BAVGPOST=0.990;BRSQ=0.208;LDAF=0.0761;AVGPOST=0.8908;RSQ=0.4023;ERATE=0.0029;THETA=0.0124;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 77909390 MERGED_DEL_2_4048 G <DEL> . . SV;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0035;AVGPOST=0.9961;RSQ=0.5170;ERATE=0.0006;THETA=0.0027;CIEND=-17,33;CIPOS=-18,19;END=77911439;SOURCE=GenomeStrip_77909390_77911439;SVTYPE=DEL;AC=4;AN=21 GT:DS:GL:BD 0.00183150 0
1 77909483 . ATT A 37 PASS INDEL;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6695;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77909508 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.853;LDAF=0.0398;AVGPOST=0.9925;RSQ=0.9268;ERATE=0.0003;THETA=0.0069;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 77909587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.790;LDAF=0.0154;AVGPOST=0.9914;RSQ=0.7878;ERATE=0.0035;THETA=0.0035;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77909616 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.845;LDAF=0.8911;AVGPOST=0.9703;RSQ=0.8812;ERATE=0.0042;THETA=0.0068;AC=1953;AN=2184 GT:DS:GL:BD 0.89423078 1
1 77909638 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6318;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77909755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4590;ERATE=0.0004;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77909834 . TTC T 491 PASS INDEL;BAVGPOST=0.953;BRSQ=0.733;LDAF=0.0919;AVGPOST=0.9143;RSQ=0.6057;ERATE=0.0138;THETA=0.0060;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 77909845 . TCTCA T 2159 PASS INDEL;BAVGPOST=0.969;BRSQ=0.821;LDAF=0.0645;AVGPOST=0.9779;RSQ=0.8664;ERATE=0.0013;THETA=0.0029;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 77909847 . TCA T 3057 PASS INDEL;BAVGPOST=0.969;BRSQ=0.822;LDAF=0.0634;AVGPOST=0.9804;RSQ=0.8826;ERATE=0.0009;THETA=0.0165;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 77909858 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.798;LDAF=0.0627;AVGPOST=0.9808;RSQ=0.8910;ERATE=0.0007;THETA=0.0053;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 77909897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.905;BRSQ=0.829;LDAF=0.3999;AVGPOST=0.8541;RSQ=0.7696;ERATE=0.0105;THETA=0.0062;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 77909897 . T TAC 5914 PASS INDEL;BAVGPOST=0.707;BRSQ=0.429;LDAF=0.3373;AVGPOST=0.7510;RSQ=0.5266;ERATE=0.0250;THETA=0.0003;AC=615;AN=2184 GT:DS:GL:BD 0.28159341 0
1 77909898 . A ATC 676 PASS INDEL;BAVGPOST=0.888;BRSQ=0.562;LDAF=0.1516;AVGPOST=0.9244;RSQ=0.7721;ERATE=0.0012;THETA=0.0043;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 77909907 rs36079912 G GTA 8850 PASS INDEL;BAVGPOST=0.890;BRSQ=0.710;LDAF=0.2542;AVGPOST=0.8462;RSQ=0.6814;ERATE=0.0098;THETA=0.0030;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 77909917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.509;LDAF=0.0048;AVGPOST=0.9930;RSQ=0.4466;ERATE=0.0007;THETA=0.0045;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77909968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.601;BRSQ=0.257;LDAF=0.6003;AVGPOST=0.6622;RSQ=0.3893;ERATE=0.0389;THETA=0.0127;AC=1396;AN=2184 GT:DS:GL:BD 0.63919413 1
1 77909986 . G GTA 4156 PASS INDEL;BAVGPOST=0.672;BRSQ=0.405;LDAF=0.3587;AVGPOST=0.7482;RSQ=0.5821;ERATE=0.0073;THETA=0.0005;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 77909989 . T TAA 2005 PASS INDEL;BAVGPOST=0.678;BRSQ=0.412;LDAF=0.3499;AVGPOST=0.7797;RSQ=0.6462;ERATE=0.0061;THETA=0.0014;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 77909991 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.912;BRSQ=0.204;LDAF=0.1249;AVGPOST=0.8410;RSQ=0.4400;ERATE=0.0063;THETA=0.0045;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 77910000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.683;BRSQ=0.418;LDAF=0.3691;AVGPOST=0.7271;RSQ=0.5461;ERATE=0.0124;THETA=0.0125;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 77910032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.176;LDAF=0.0252;AVGPOST=0.9632;RSQ=0.3660;ERATE=0.0030;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77910044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.283;LDAF=0.0806;AVGPOST=0.9014;RSQ=0.4951;ERATE=0.0037;THETA=0.0042;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 77910061 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.216;LDAF=0.0153;AVGPOST=0.9801;RSQ=0.5095;ERATE=0.0005;THETA=0.0062;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77910070 rs60746056 G GTA 7371 PASS INDEL;BAVGPOST=0.789;BRSQ=0.549;LDAF=0.6477;AVGPOST=0.7822;RSQ=0.6225;ERATE=0.0037;THETA=0.0028;AC=1471;AN=2184 GT:DS:GL:BD 0.67353481 1
1 77910075 . T TAC 16039 PASS INDEL;BAVGPOST=0.734;BRSQ=0.479;LDAF=0.5907;AVGPOST=0.7177;RSQ=0.4960;ERATE=0.0192;THETA=0.0043;AC=1344;AN=2184 GT:DS:GL:BD 0.61538464 1
1 77910106 . TAC T 2174 PASS INDEL;BAVGPOST=0.781;BRSQ=0.327;LDAF=0.2561;AVGPOST=0.7286;RSQ=0.4066;ERATE=0.0169;THETA=0.0111;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 77910108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.746;BRSQ=0.383;LDAF=0.3381;AVGPOST=0.6809;RSQ=0.4123;ERATE=0.0214;THETA=0.0009;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 77910134 . G GTA 148 PASS INDEL;BAVGPOST=0.861;BRSQ=0.042;LDAF=0.1307;AVGPOST=0.8024;RSQ=0.3022;ERATE=0.0091;THETA=0.0018;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 77910306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.782;BRSQ=0.111;LDAF=0.2128;AVGPOST=0.7347;RSQ=0.3305;ERATE=0.0150;THETA=0.0078;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 77910416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0034;AVGPOST=0.9972;RSQ=0.6716;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77910433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0034;AVGPOST=0.9972;RSQ=0.6740;ERATE=0.0005;THETA=0.0082;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77910482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0359;AVGPOST=0.9969;RSQ=0.9643;ERATE=0.0006;THETA=0.0022;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 77910493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.4996;ERATE=0.0005;THETA=0.0113;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77910526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7454;ERATE=0.0004;THETA=0.0046;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77910556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6050;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77910585 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8142;ERATE=0.0004;THETA=0.0083;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77910638 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5788;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77910698 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7002;ERATE=0.0003;THETA=0.0060;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77910718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0026;AVGPOST=0.9997;RSQ=0.9550;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77910812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4741;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77911130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4176;AVGPOST=0.9936;RSQ=0.9895;ERATE=0.0005;THETA=0.0010;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 77911141 . GC G 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6831;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77911179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77911338 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.387;LDAF=0.0053;AVGPOST=0.9948;RSQ=0.6281;ERATE=0.0008;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77911450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.933;LDAF=0.0746;AVGPOST=0.9828;RSQ=0.9114;ERATE=0.0008;THETA=0.0003;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 77911595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.539;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6567;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77911601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77911675 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0353;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 77911798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77911854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1264;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 77911878 . T TC 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.5141;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77911889 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77911973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2220;AVGPOST=0.9976;RSQ=0.9949;ERATE=0.0004;THETA=0.0003;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 77912053 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.9830;AVGPOST=0.9989;RSQ=0.9754;ERATE=0.0003;THETA=0.0011;AC=2148;AN=2184 GT:DS:GL:BD 0.98351645 1
1 77912178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0355;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0004;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 77912363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77912638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.546;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7232;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77912719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.943;LDAF=0.0508;AVGPOST=0.9971;RSQ=0.9741;ERATE=0.0004;THETA=0.0004;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 77912789 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0120;AVGPOST=0.9986;RSQ=0.9511;ERATE=0.0004;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77912969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2547;AVGPOST=0.9977;RSQ=0.9950;ERATE=0.0004;THETA=0.0008;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 77913182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77913240 . T TA 10296 PASS INDEL;BAVGPOST=0.990;BRSQ=0.965;LDAF=0.1329;AVGPOST=0.9837;RSQ=0.9517;ERATE=0.0035;THETA=0.0003;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 77913272 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0324;AVGPOST=0.9976;RSQ=0.9727;ERATE=0.0005;THETA=0.0002;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 77913288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0068;AVGPOST=0.9976;RSQ=0.8855;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77913389 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6841;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77913406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77913517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3710;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=810;AN=2184 GT:DS:GL:BD 0.37087911 0
1 77913617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9505;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77913741 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7941;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77913769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.9824;AVGPOST=0.9988;RSQ=0.9720;ERATE=0.0003;THETA=0.0007;AC=2146;AN=2184 GT:DS:GL:BD 0.98260075 1
1 77913846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.610;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5539;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77913847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0105;AVGPOST=0.9993;RSQ=0.9760;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77913906 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.5538;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77914041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8720;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77914159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2548;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 77914241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8620;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77914302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9183;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77914414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0167;AVGPOST=0.9995;RSQ=0.9866;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77914546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77914556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.709;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9206;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77914632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0130;AVGPOST=0.9953;RSQ=0.8765;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77914669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2550;AVGPOST=0.9961;RSQ=0.9920;ERATE=0.0008;THETA=0.0005;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 77914725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4641;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77914993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77915143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77915272 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5135;ERATE=0.0009;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77915520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8801;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77915637 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7352;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77915659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77915728 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.757;LDAF=0.0077;AVGPOST=0.9972;RSQ=0.8625;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77915758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0044;AVGPOST=0.9974;RSQ=0.7582;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77915885 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0049;AVGPOST=0.9989;RSQ=0.8974;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77915943 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.815;LDAF=0.0130;AVGPOST=0.9979;RSQ=0.9298;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77915974 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5649;AVGPOST=0.9919;RSQ=0.9871;ERATE=0.0019;THETA=0.0009;AC=1232;AN=2184 GT:DS:GL:BD 0.56410259 1
1 77916070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77916100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77916236 rs79593267 T TA 86284 PASS INDEL;BAVGPOST=0.996;BRSQ=0.915;LDAF=0.9767;AVGPOST=0.9921;RSQ=0.8848;ERATE=0.0009;THETA=0.0004;AC=2138;AN=2184 GT:DS:GL:BD 0.97893775 1
1 77916339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77916345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8703;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77916411 . TA T 4 PASS INDEL;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0035;AVGPOST=0.9963;RSQ=0.5375;ERATE=0.0005;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77916427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77916483 . CAA C 5376 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0350;AVGPOST=0.9991;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 77916627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1249;AVGPOST=0.9991;RSQ=0.9967;ERATE=0.0004;THETA=0.0007;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77916647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2587;AVGPOST=0.9972;RSQ=0.9937;ERATE=0.0005;THETA=0.0003;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 77916802 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77916820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6271;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77916880 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6884;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77916916 . G GA 39 PASS INDEL;BAVGPOST=0.996;BRSQ=0.418;LDAF=0.0090;AVGPOST=0.9894;RSQ=0.5376;ERATE=0.0023;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77916919 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77916968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.9829;AVGPOST=0.9985;RSQ=0.9728;ERATE=0.0003;THETA=0.0004;AC=2148;AN=2184 GT:DS:GL:BD 0.98351645 1
1 77917094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.9026;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77917137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77917228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2557;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 77917304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77917318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0213;AVGPOST=0.9971;RSQ=0.9444;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77917431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77917447 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0153;AVGPOST=0.9985;RSQ=0.9603;ERATE=0.0003;THETA=0.0012;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77917475 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77917655 . CTA C 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6450;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77917857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8493;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77918069 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.9085;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77918135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4832;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77918227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0477;AVGPOST=0.9993;RSQ=0.9938;ERATE=0.0003;THETA=0.0008;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77918275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77918347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2718;AVGPOST=0.9973;RSQ=0.9948;ERATE=0.0006;THETA=0.0005;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 77918525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.8975;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77918663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5554;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77918684 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8561;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77918936 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.0806;AVGPOST=0.9957;RSQ=0.9782;ERATE=0.0003;THETA=0.0005;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 77919057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77919112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6492;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77919126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77919148 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6283;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77919211 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.877;LDAF=0.0496;AVGPOST=0.9892;RSQ=0.9203;ERATE=0.0004;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 77919269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0467;AVGPOST=0.9992;RSQ=0.9924;ERATE=0.0003;THETA=0.0005;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 77919310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4172;AVGPOST=0.9960;RSQ=0.9925;ERATE=0.0005;THETA=0.0002;AC=910;AN=2184 GT:DS:GL:BD 0.41666666 0
1 77919327 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8688;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77919438 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3042;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=665;AN=2184 GT:DS:GL:BD 0.30448717 0
1 77919554 . TC T 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7464;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77919839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77919973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77920068 . TTC T 71 PASS INDEL;BAVGPOST=0.992;BRSQ=0.669;LDAF=0.0230;AVGPOST=0.9766;RSQ=0.5934;ERATE=0.0084;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77920119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8661;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77920185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77920213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77920252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7090;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77920330 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77920362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0775;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0007;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77920419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7104;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77920423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.908;LDAF=0.0235;AVGPOST=0.9974;RSQ=0.9564;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77920445 rs77842745 GTCTTACAC G 4440 PASS INDEL;BAVGPOST=0.996;BRSQ=0.908;LDAF=0.0232;AVGPOST=0.9975;RSQ=0.9549;ERATE=0.0004;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 77920523 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.701;LDAF=0.0056;AVGPOST=0.9962;RSQ=0.7377;ERATE=0.0007;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77920576 . T TC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77920616 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0773;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77920679 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0657;AVGPOST=0.9992;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 77920694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0772;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0008;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77920713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0774;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0003;THETA=0.0006;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77920861 . AC A 8114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0788;AVGPOST=0.9985;RSQ=0.9916;ERATE=0.0004;THETA=0.0004;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 77920899 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8286;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77920959 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9002;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77920979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0087;AVGPOST=0.9990;RSQ=0.9552;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77921003 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0306;AVGPOST=0.9987;RSQ=0.9832;ERATE=0.0003;THETA=0.0002;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 77921025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.0774;AVGPOST=0.9994;RSQ=0.9959;ERATE=0.0004;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77921265 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0777;AVGPOST=0.9988;RSQ=0.9928;ERATE=0.0004;THETA=0.0002;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77921295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0773;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77921302 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3790;AVGPOST=0.9971;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=829;AN=2184 GT:DS:GL:BD 0.37957877 0
1 77921321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0775;AVGPOST=0.9991;RSQ=0.9941;ERATE=0.0005;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77921329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77921389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7046;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77921532 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0056;AVGPOST=0.9994;RSQ=0.9490;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77921605 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7985;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77921637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77921708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0773;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77921873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0777;AVGPOST=0.9989;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77921900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0773;AVGPOST=0.9994;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77922038 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9300;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77922048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0066;AVGPOST=0.9989;RSQ=0.9423;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77922115 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0775;AVGPOST=0.9994;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77922124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77922237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0773;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77922365 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0766;AVGPOST=0.9982;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77922425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77922501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9702;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77922508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6871;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77922549 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0772;AVGPOST=0.9987;RSQ=0.9933;ERATE=0.0003;THETA=0.0008;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77922604 . CT C 1671 PASS INDEL;BAVGPOST=0.990;BRSQ=0.932;LDAF=0.0801;AVGPOST=0.9941;RSQ=0.9698;ERATE=0.0009;THETA=0.0003;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 77922779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77922787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77922868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77922881 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.943;LDAF=0.0234;AVGPOST=0.9972;RSQ=0.9571;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 77922942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0776;AVGPOST=0.9992;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77922998 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0772;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0002;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77923069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9689;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77923083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4504;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77923172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0774;AVGPOST=0.9994;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77923343 . TTGTC T 7961 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0477;AVGPOST=0.9990;RSQ=0.9912;ERATE=0.0005;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77923456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0303;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 77923530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0661;AVGPOST=0.9985;RSQ=0.9902;ERATE=0.0003;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 77923567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7290;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77923641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3791;AVGPOST=0.9976;RSQ=0.9954;ERATE=0.0008;THETA=0.0004;AC=829;AN=2184 GT:DS:GL:BD 0.37957877 0
1 77923645 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77923656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77923667 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0774;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77923734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0774;AVGPOST=0.9994;RSQ=0.9962;ERATE=0.0005;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77924124 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0087;AVGPOST=0.9991;RSQ=0.9594;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77924133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6144;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77924159 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8976;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77924163 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0477;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77924441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6418;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77924452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.927;LDAF=0.0351;AVGPOST=0.9973;RSQ=0.9653;ERATE=0.0003;THETA=0.0002;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 77924476 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3801;AVGPOST=0.9974;RSQ=0.9956;ERATE=0.0005;THETA=0.0004;AC=832;AN=2184 GT:DS:GL:BD 0.38095239 0
1 77924523 . AC A 119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5678;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77924840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0656;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 77924890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0772;AVGPOST=0.9993;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77924957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5118;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77924968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5313;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77924977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7986;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77925024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7972;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77925198 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.7118;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77925247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0773;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77925248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8605;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77925291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77925301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0773;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77925439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0476;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77925448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6310;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77925487 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9358;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77925512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6267;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77925553 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0084;AVGPOST=0.9977;RSQ=0.8993;ERATE=0.0004;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77925605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.862;LDAF=0.0109;AVGPOST=0.9973;RSQ=0.8973;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77925881 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7728;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77925913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6208;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77926000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8590;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77926086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.6145;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77926206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77926295 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4170;AVGPOST=0.9963;RSQ=0.9928;ERATE=0.0007;THETA=0.0003;AC=910;AN=2184 GT:DS:GL:BD 0.41666666 0
1 77926377 . A AC 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5578;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77926479 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0768;AVGPOST=0.9981;RSQ=0.9879;ERATE=0.0006;THETA=0.0003;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 77926566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77926600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0024;AVGPOST=0.9966;RSQ=0.4473;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77926779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.975;LDAF=0.3766;AVGPOST=0.9906;RSQ=0.9843;ERATE=0.0012;THETA=0.0003;AC=824;AN=2184 GT:DS:GL:BD 0.37728938 0
1 77926787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.940;LDAF=0.0771;AVGPOST=0.9929;RSQ=0.9598;ERATE=0.0006;THETA=0.0002;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 77926873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0293;AVGPOST=0.9943;RSQ=0.9290;ERATE=0.0003;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 77926876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0774;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0003;THETA=0.0001;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77926904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0488;AVGPOST=0.9984;RSQ=0.9858;ERATE=0.0006;THETA=0.0003;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 77926919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.829;LDAF=0.0108;AVGPOST=0.9942;RSQ=0.8079;ERATE=0.0006;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77926939 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0484;AVGPOST=0.9979;RSQ=0.9814;ERATE=0.0007;THETA=0.0002;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77927012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.730;LDAF=0.0112;AVGPOST=0.9936;RSQ=0.8086;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77927141 . CAGGT C 3202 PASS INDEL;BAVGPOST=0.986;BRSQ=0.803;LDAF=0.0427;AVGPOST=0.9820;RSQ=0.8294;ERATE=0.0015;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 77927144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.3708;AVGPOST=0.9894;RSQ=0.9835;ERATE=0.0009;THETA=0.0003;AC=804;AN=2184 GT:DS:GL:BD 0.36813188 0
1 77927207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0784;AVGPOST=0.9951;RSQ=0.9740;ERATE=0.0007;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 77927325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.5638;AVGPOST=0.9946;RSQ=0.9902;ERATE=0.0014;THETA=0.0003;AC=1231;AN=2184 GT:DS:GL:BD 0.56364471 1
1 77927410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.915;LDAF=0.0373;AVGPOST=0.9937;RSQ=0.9286;ERATE=0.0005;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 77927573 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.8068;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77927643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0477;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77927678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77927800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0776;AVGPOST=0.9990;RSQ=0.9936;ERATE=0.0004;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77927813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77927820 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.952;LDAF=0.0901;AVGPOST=0.9983;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 77927936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0477;AVGPOST=0.9996;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77927939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0064;AVGPOST=0.9971;RSQ=0.8119;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77927940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77927948 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3809;AVGPOST=0.9976;RSQ=0.9960;ERATE=0.0005;THETA=0.0006;AC=833;AN=2184 GT:DS:GL:BD 0.38141027 0
1 77928144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.854;LDAF=0.9684;AVGPOST=0.9820;RSQ=0.7770;ERATE=0.0019;THETA=0.0002;AC=2129;AN=2184 GT:DS:GL:BD 0.97481686 1
1 77928169 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6340;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77928227 . A AAT 38 PASS INDEL;BAVGPOST=0.992;BRSQ=0.544;LDAF=0.0195;AVGPOST=0.9759;RSQ=0.5077;ERATE=0.0036;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77928417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77928460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5658;AVGPOST=0.9944;RSQ=0.9909;ERATE=0.0011;THETA=0.0005;AC=1237;AN=2184 GT:DS:GL:BD 0.56639194 1
1 77928865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0148;AVGPOST=0.9992;RSQ=0.9817;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77928867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0657;AVGPOST=0.9990;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 77928964 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77929084 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9323;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77929104 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77929129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0657;AVGPOST=0.9992;RSQ=0.9941;ERATE=0.0003;THETA=0.0006;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 77929198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9817;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77929296 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3827;AVGPOST=0.9927;RSQ=0.9882;ERATE=0.0014;THETA=0.0002;AC=833;AN=2184 GT:DS:GL:BD 0.38141027 0
1 77929303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0108;AVGPOST=0.9983;RSQ=0.9355;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77929344 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77929409 . TC T 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77929463 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0142;AVGPOST=0.9989;RSQ=0.9657;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77929479 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4049;AVGPOST=0.9967;RSQ=0.9938;ERATE=0.0006;THETA=0.0066;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 77929555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8938;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77929620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7822;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77929632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7817;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77929752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7971;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77929763 rs61341404 ATTG A 10136 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0804;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 77929859 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77930006 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.700;LDAF=0.0041;AVGPOST=0.9972;RSQ=0.6987;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77930019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77930040 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77930043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6009;AVGPOST=0.9928;RSQ=0.9888;ERATE=0.0007;THETA=0.0005;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 77930053 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.6041;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77930296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77930336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6462;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77930356 . CAGAA C 1234 PASS INDEL;BAVGPOST=0.997;BRSQ=0.751;LDAF=0.0083;AVGPOST=0.9973;RSQ=0.8729;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77930521 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9663;ERATE=0.0003;THETA=0.0019;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77930522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0787;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 77930524 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77930716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77930840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0464;AVGPOST=0.9993;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 77930884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77930917 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0805;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 77931228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9574;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77931319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77931341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0463;AVGPOST=0.9991;RSQ=0.9929;ERATE=0.0003;THETA=0.0005;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 77931382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77931618 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77931654 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77931673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7442;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77931778 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.7247;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77931883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7404;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77932004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0003;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77932039 . A AC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6589;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77932095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6552;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0003;THETA=0.0007;AC=1432;AN=2184 GT:DS:GL:BD 0.65567768 1
1 77932166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9802;AVGPOST=0.9997;RSQ=0.9940;ERATE=0.0003;THETA=0.0007;AC=2141;AN=2184 GT:DS:GL:BD 0.98031133 1
1 77932188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77932263 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5369;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77932395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5508;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77932409 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7762;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77932664 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.947;LDAF=0.0396;AVGPOST=0.9981;RSQ=0.9820;ERATE=0.0003;THETA=0.0006;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 77932750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2284;AVGPOST=0.9969;RSQ=0.9927;ERATE=0.0005;THETA=0.0034;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 77932762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77932782 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77932792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77932810 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7568;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77932839 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9358;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77932866 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5608;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77932873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77932980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0034;AVGPOST=0.9966;RSQ=0.6476;ERATE=0.0003;THETA=0.0069;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77932994 . G GACTA 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4520;ERATE=0.0004;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77933139 . CTGA C 5125 PASS INDEL;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0393;AVGPOST=0.9951;RSQ=0.9516;ERATE=0.0004;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 77933143 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7170;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77933204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9283;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77933208 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77933216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6295;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77933279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77933352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0192;AVGPOST=0.9970;RSQ=0.9382;ERATE=0.0005;THETA=0.0042;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77933409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9685;ERATE=0.0003;THETA=0.0023;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77933601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5904;ERATE=0.0004;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77933641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8483;ERATE=0.0005;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77933665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77933779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0072;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77933799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77933949 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0160;AVGPOST=0.9997;RSQ=0.9907;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77934051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77934071 . T TCCCTA 685 PASS INDEL;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0052;AVGPOST=0.9979;RSQ=0.8248;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77934251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5281;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77934335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.992;LDAF=0.4055;AVGPOST=0.9948;RSQ=0.9911;ERATE=0.0004;THETA=0.0005;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 77934545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6983;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77934568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5752;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77934627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8202;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77934740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6636;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77934778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0259;AVGPOST=0.9989;RSQ=0.9814;ERATE=0.0003;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 77934815 . C CT 1066 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9688;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77934880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6411;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77935034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77935040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77935132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9205;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77935321 . C CGCT 6307 PASS INDEL;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0392;AVGPOST=0.9973;RSQ=0.9737;ERATE=0.0005;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 77935405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0795;AVGPOST=0.9994;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 77935468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9763;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77935703 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77935916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0031;AVGPOST=0.9954;RSQ=0.4444;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77935961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0040;AVGPOST=0.9957;RSQ=0.6120;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77936186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6856;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77936190 . AAAT A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7248;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77936380 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.942;LDAF=0.9793;AVGPOST=0.9970;RSQ=0.9457;ERATE=0.0005;THETA=0.0005;AC=2142;AN=2184 GT:DS:GL:BD 0.98076922 1
1 77936511 rs34907598 AATATATATATATATATATATATATAT A 7799 PASS INDEL;BAVGPOST=0.458;BRSQ=0.078;LDAF=0.4853;AVGPOST=0.6506;RSQ=0.3806;ERATE=0.0308;THETA=0.0007;AC=1009;AN=2184 GT:DS:GL:BD 0.46199635 0
1 77936541 . TATATATATATATATATATA T 9601 PASS INDEL;BAVGPOST=0.577;BRSQ=0.045;LDAF=0.7795;AVGPOST=0.7170;RSQ=0.3271;ERATE=0.0159;THETA=0.0004;AC=1880;AN=2184 GT:DS:GL:BD 0.86080587 1
1 77936543 . TATATATATATATATATA T 8523 PASS INDEL;BAVGPOST=0.652;BRSQ=0.038;LDAF=0.8213;AVGPOST=0.7566;RSQ=0.3269;ERATE=0.0130;THETA=0.0007;AC=1936;AN=2184 GT:DS:GL:BD 0.88644689 1
1 77936623 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.735;LDAF=0.0191;AVGPOST=0.9915;RSQ=0.8115;ERATE=0.0006;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77936769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.548;LDAF=0.0112;AVGPOST=0.9867;RSQ=0.5537;ERATE=0.0012;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77936851 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4969;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77936999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4359;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77937018 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77937057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9732;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77937327 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77937330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.943;LDAF=0.0397;AVGPOST=0.9977;RSQ=0.9753;ERATE=0.0003;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 77937399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.666;LDAF=0.0048;AVGPOST=0.9963;RSQ=0.7292;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77937407 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77937440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8983;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77937473 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0284;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77937597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9621;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77937600 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6765;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77937617 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1101;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0007;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 77937717 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77937722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.812;LDAF=0.0088;AVGPOST=0.9985;RSQ=0.9220;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77937820 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7847;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77937824 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77937854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77937891 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0800;AVGPOST=0.9994;RSQ=0.9964;ERATE=0.0003;THETA=0.0016;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 77938064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0056;AVGPOST=0.9980;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77938087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4502;AVGPOST=0.9974;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 77938165 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4484;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0005;THETA=0.0003;AC=980;AN=2184 GT:DS:GL:BD 0.44871795 0
1 77938345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5725;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77938394 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0153;AVGPOST=0.9968;RSQ=0.9320;ERATE=0.0007;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77938415 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0148;AVGPOST=0.9995;RSQ=0.9881;ERATE=0.0003;THETA=0.0010;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77938422 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.4713;AVGPOST=0.9890;RSQ=0.9833;ERATE=0.0019;THETA=0.0003;AC=1032;AN=2184 GT:DS:GL:BD 0.47252747 0
1 77938427 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7772;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77938434 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9496;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77938462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5211;ERATE=0.0005;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77938469 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.924;BRSQ=0.869;LDAF=0.4159;AVGPOST=0.9125;RSQ=0.8791;ERATE=0.0157;THETA=0.0005;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 77938644 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7120;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77938659 . GAGCCCGCCC G 20388 PASS INDEL;BAVGPOST=0.994;BRSQ=0.964;LDAF=0.0747;AVGPOST=0.9924;RSQ=0.9612;ERATE=0.0003;THETA=0.0005;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 77938664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3991;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77938665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0286;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77938822 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77938842 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77938869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.8744;ERATE=0.0003;THETA=0.0027;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77939013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77939136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5149;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77939190 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9997;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 77939201 . TGGACAGCTAC T 698 PASS INDEL;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77939211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4267;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77939213 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9663;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77939277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7310;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77939333 . AAAG A 107 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77939339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0308;AVGPOST=0.9989;RSQ=0.9887;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 77939373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8948;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77939381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3854;AVGPOST=0.9969;RSQ=0.9950;ERATE=0.0005;THETA=0.0003;AC=839;AN=2184 GT:DS:GL:BD 0.38415751 0
1 77939418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5186;AVGPOST=0.9960;RSQ=0.9932;ERATE=0.0006;THETA=0.0028;AC=1134;AN=2184 GT:DS:GL:BD 0.51923078 1
1 77939504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.8329;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77939550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77939595 . AATGG A 393 PASS INDEL;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8668;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77939739 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0790;AVGPOST=0.9986;RSQ=0.9927;ERATE=0.0004;THETA=0.0005;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 77939797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77939808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8142;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77939866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77940019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5657;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77940020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6270;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77940139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9531;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77940173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0292;AVGPOST=0.9989;RSQ=0.9873;ERATE=0.0003;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77940384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0288;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77940542 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1108;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 77940680 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77940747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.597;LDAF=0.0039;AVGPOST=0.9963;RSQ=0.6235;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77940751 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0046;AVGPOST=0.9983;RSQ=0.8728;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77940838 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1311;AVGPOST=0.9893;RSQ=0.9661;ERATE=0.0011;THETA=0.0006;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 77940876 rs71819974 ATATATGTG A 45917 PASS INDEL;BAVGPOST=0.867;BRSQ=0.574;LDAF=0.7832;AVGPOST=0.8085;RSQ=0.5522;ERATE=0.0267;THETA=0.0003;AC=1805;AN=2184 GT:DS:GL:BD 0.82646519 1
1 77940905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0194;AVGPOST=0.9959;RSQ=0.9221;ERATE=0.0004;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77941033 . AC A 17 PASS INDEL;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0154;AVGPOST=0.9756;RSQ=0.3794;ERATE=0.0017;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77941042 rs71075746 TTA T 2849 PASS INDEL;BAVGPOST=0.972;BRSQ=0.879;LDAF=0.1329;AVGPOST=0.9547;RSQ=0.8475;ERATE=0.0038;THETA=0.0005;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 77941054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.848;BRSQ=0.699;LDAF=0.4722;AVGPOST=0.8033;RSQ=0.6652;ERATE=0.0204;THETA=0.0006;AC=1065;AN=2184 GT:DS:GL:BD 0.48763737 0
1 77941063 . TTA T 249 PASS INDEL;BAVGPOST=0.938;BRSQ=0.121;LDAF=0.0798;AVGPOST=0.9116;RSQ=0.5543;ERATE=0.0029;THETA=0.0002;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 77941065 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.562;LDAF=0.0466;AVGPOST=0.9702;RSQ=0.7526;ERATE=0.0022;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 77941067 . ATATATG A 443 PASS INDEL;BAVGPOST=0.910;BRSQ=0.132;LDAF=0.1063;AVGPOST=0.8724;RSQ=0.4930;ERATE=0.0050;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 77941072 . T TAC 92 PASS INDEL;BAVGPOST=0.964;BRSQ=0.128;LDAF=0.0973;AVGPOST=0.8681;RSQ=0.4112;ERATE=0.0066;THETA=0.0003;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 77941083 rs71658795 A AC 416 PASS INDEL;BAVGPOST=0.850;BRSQ=0.126;LDAF=0.1039;AVGPOST=0.9145;RSQ=0.6469;ERATE=0.0050;THETA=0.0003;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 77941091 rs71658795 TG T 11816 PASS INDEL;BAVGPOST=0.755;BRSQ=0.112;LDAF=0.7895;AVGPOST=0.7559;RSQ=0.4045;ERATE=0.0175;THETA=0.0002;AC=1847;AN=2184 GT:DS:GL:BD 0.84569597 1
1 77941119 rs71658795 T TAC 2840 PASS INDEL;BAVGPOST=0.652;BRSQ=0.131;LDAF=0.7154;AVGPOST=0.6931;RSQ=0.3826;ERATE=0.0215;THETA=0.0005;AC=1704;AN=2184 GT:DS:GL:BD 0.78021979 1
1 77941121 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.105;LDAF=0.1052;AVGPOST=0.8445;RSQ=0.3407;ERATE=0.0090;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 77941147 rs71658795 A AT 711 PASS INDEL;BAVGPOST=0.690;BRSQ=0.065;LDAF=0.1576;AVGPOST=0.7938;RSQ=0.3755;ERATE=0.0080;THETA=0.0008;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 77941149 rs71658795 AT A 843 PASS INDEL;BAVGPOST=0.485;BRSQ=0.061;LDAF=0.2727;AVGPOST=0.6734;RSQ=0.2880;ERATE=0.0232;THETA=0.0004;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 77941188 . TTA T 4889 PASS INDEL;BAVGPOST=0.728;BRSQ=0.436;LDAF=0.3943;AVGPOST=0.7381;RSQ=0.5338;ERATE=0.0230;THETA=0.0003;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 77941230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.861;LDAF=0.4563;AVGPOST=0.8396;RSQ=0.7240;ERATE=0.0219;THETA=0.0006;AC=976;AN=2184 GT:DS:GL:BD 0.44688645 0
1 77941240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.265;LDAF=0.0138;AVGPOST=0.9830;RSQ=0.5314;ERATE=0.0010;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77941244 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.454;LDAF=0.0064;AVGPOST=0.9898;RSQ=0.3595;ERATE=0.0015;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77941267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.549;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4327;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77941407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7617;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77941524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4487;AVGPOST=0.9914;RSQ=0.9854;ERATE=0.0010;THETA=0.0003;AC=978;AN=2184 GT:DS:GL:BD 0.44780219 0
1 77941655 . ATT A 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5968;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77941698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0069;AVGPOST=0.9994;RSQ=0.9645;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77941723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.5010;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77941735 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4183;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77941811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0294;AVGPOST=0.9985;RSQ=0.9840;ERATE=0.0003;THETA=0.0006;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77941813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9731;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77941913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5891;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77941958 rs77909222 CT C 14032 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2348;AVGPOST=0.9971;RSQ=0.9926;ERATE=0.0006;THETA=0.0004;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 77941978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77942001 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3886;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0005;THETA=0.0003;AC=848;AN=2184 GT:DS:GL:BD 0.38827839 0
1 77942035 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9817;AVGPOST=0.9994;RSQ=0.9862;ERATE=0.0004;THETA=0.0007;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 77942156 rs5775407 TAAA T 22518 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1245;AVGPOST=0.9974;RSQ=0.9915;ERATE=0.0005;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 77942278 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0289;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0051;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77942445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7679;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77942446 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0038;AVGPOST=0.9978;RSQ=0.7939;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77942536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77942559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1261;AVGPOST=0.9988;RSQ=0.9956;ERATE=0.0004;THETA=0.0015;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 77942585 . GT G 15786 PASS INDEL;BAVGPOST=0.970;BRSQ=0.940;LDAF=0.4960;AVGPOST=0.9294;RSQ=0.8893;ERATE=0.0148;THETA=0.0004;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 77942643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1281;AVGPOST=0.9965;RSQ=0.9886;ERATE=0.0004;THETA=0.0004;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 77942673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.7719;ERATE=0.0008;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77942848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8504;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77942931 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77942941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0295;AVGPOST=0.9994;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 77942976 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77943012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0290;AVGPOST=0.9995;RSQ=0.9931;ERATE=0.0003;THETA=0.0010;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77943096 . A AT 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4883;ERATE=0.0004;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77943115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77943125 . C CT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4851;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77943126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0289;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77943196 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0290;AVGPOST=0.9996;RSQ=0.9937;ERATE=0.0004;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77943221 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77943261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0290;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0003;THETA=0.0015;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77943362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.933;LDAF=0.0554;AVGPOST=0.9971;RSQ=0.9783;ERATE=0.0005;THETA=0.0006;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 77943404 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6041;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77943430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0788;AVGPOST=0.9986;RSQ=0.9934;ERATE=0.0004;THETA=0.0006;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 77943433 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77943599 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0289;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77943719 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1119;AVGPOST=0.9993;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 77943958 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6374;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77944063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77944166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7880;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77944190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77944293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0289;AVGPOST=0.9997;RSQ=0.9951;ERATE=0.0003;THETA=0.0032;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77944378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6587;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77944437 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7005;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77944484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77944511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77944550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9822;AVGPOST=0.9997;RSQ=0.9938;ERATE=0.0003;THETA=0.0005;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 77944696 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77944732 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2784;AVGPOST=0.9970;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 77944762 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0288;AVGPOST=0.9998;RSQ=0.9965;ERATE=0.0003;THETA=0.0006;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77944806 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7181;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77944837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77944976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0071;AVGPOST=0.9976;RSQ=0.8596;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77945039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6351;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77945134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9986;RSQ=0.9799;ERATE=0.0005;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77945139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.4641;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77945180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5724;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77945208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0292;AVGPOST=0.9990;RSQ=0.9870;ERATE=0.0004;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77945278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77945334 . ACT A 729 PASS INDEL;BAVGPOST=0.970;BRSQ=0.696;LDAF=0.0717;AVGPOST=0.9397;RSQ=0.6175;ERATE=0.0368;THETA=0.0005;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 77945366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77945373 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0092;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77945414 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0158;AVGPOST=0.9985;RSQ=0.9630;ERATE=0.0003;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77945434 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.943;LDAF=0.0229;AVGPOST=0.9971;RSQ=0.9526;ERATE=0.0003;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77945570 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0288;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0008;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77945577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0289;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77945609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77945634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77945635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1226;AVGPOST=0.9994;RSQ=0.9974;ERATE=0.0004;THETA=0.0008;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 77945649 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9821;AVGPOST=0.9995;RSQ=0.9881;ERATE=0.0004;THETA=0.0014;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 77945841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.694;LDAF=0.9426;AVGPOST=0.9527;RSQ=0.6704;ERATE=0.0122;THETA=0.0008;AC=2081;AN=2184 GT:DS:GL:BD 0.95283884 1
1 77945965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1225;AVGPOST=0.9986;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 77945995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77946053 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0087;AVGPOST=0.9979;RSQ=0.9080;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77946096 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0289;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77946202 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.0268;AVGPOST=0.9968;RSQ=0.9571;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77946214 . TGATAGCCATGTA T 4173 PASS INDEL;BAVGPOST=0.995;BRSQ=0.900;LDAF=0.0271;AVGPOST=0.9959;RSQ=0.9434;ERATE=0.0004;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77946305 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0783;AVGPOST=0.9994;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 77946335 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0068;AVGPOST=0.9968;RSQ=0.8300;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77946386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9683;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77946449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0288;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77946515 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9444;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77946609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8631;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77946669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0288;AVGPOST=0.9996;RSQ=0.9944;ERATE=0.0003;THETA=0.0007;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77946687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.9022;AVGPOST=0.9993;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=1970;AN=2184 GT:DS:GL:BD 0.90201467 1
1 77946780 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0290;AVGPOST=0.9995;RSQ=0.9930;ERATE=0.0004;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77946906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0152;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77946918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8483;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77947009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1272;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 77947054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77947120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0288;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77947176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77947188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0850;AVGPOST=0.9967;RSQ=0.9837;ERATE=0.0004;THETA=0.0005;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 77947239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2866;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 77947276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77947455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77947465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9282;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77947473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8454;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77947609 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7458;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77947624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0287;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77947652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9991;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77947700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6805;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77947730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1115;AVGPOST=0.9988;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 77947755 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77947759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6789;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77947923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0290;AVGPOST=0.9996;RSQ=0.9938;ERATE=0.0003;THETA=0.0007;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77947936 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4938;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77948025 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77948145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0288;AVGPOST=0.9994;RSQ=0.9910;ERATE=0.0004;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77948180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0289;AVGPOST=0.9996;RSQ=0.9944;ERATE=0.0003;THETA=0.0006;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77948260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0030;AVGPOST=0.9969;RSQ=0.6037;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77948279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0296;AVGPOST=0.9982;RSQ=0.9763;ERATE=0.0004;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77948320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5540;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77948338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0289;AVGPOST=0.9997;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77948372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0314;AVGPOST=0.9974;RSQ=0.9694;ERATE=0.0005;THETA=0.0006;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 77948405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.7018;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77948408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0021;AVGPOST=0.9966;RSQ=0.3451;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77948442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1330;AVGPOST=0.9900;RSQ=0.9652;ERATE=0.0013;THETA=0.0006;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 77948473 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77948585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0290;AVGPOST=0.9996;RSQ=0.9937;ERATE=0.0004;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77948586 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77948673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0288;AVGPOST=0.9992;RSQ=0.9890;ERATE=0.0004;THETA=0.0008;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77948677 rs34568620 TAAAAAAAAAAAAAAAAA T 868 PASS INDEL;BAVGPOST=0.887;BRSQ=0.208;LDAF=0.1628;AVGPOST=0.8129;RSQ=0.4560;ERATE=0.0071;THETA=0.0006;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 77948729 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.950;LDAF=0.0295;AVGPOST=0.9985;RSQ=0.9821;ERATE=0.0005;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 77948771 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9349;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77948866 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0288;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77948868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0288;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77948890 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7701;ERATE=0.0016;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77948900 . CCCT C 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6393;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77948901 . CCTCT C 374 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8071;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77949087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77949089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8383;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77949090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77949095 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77949123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2817;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=615;AN=2184 GT:DS:GL:BD 0.28159341 0
1 77949129 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2867;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0007;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 77949237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0289;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0009;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77949279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77949287 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0289;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77949292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0145;AVGPOST=0.9993;RSQ=0.9782;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77949377 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77949381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0266;AVGPOST=0.9990;RSQ=0.9886;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 77949569 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0177;AVGPOST=0.9987;RSQ=0.9737;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77949583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6059;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77949652 . C CCAG 2174 PASS INDEL;BAVGPOST=0.990;BRSQ=0.816;LDAF=0.0252;AVGPOST=0.9872;RSQ=0.8245;ERATE=0.0013;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77949726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6949;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77949731 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.0813;AVGPOST=0.9973;RSQ=0.9870;ERATE=0.0004;THETA=0.0002;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 77949750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0044;AVGPOST=0.9940;RSQ=0.5239;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77949780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5569;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77949806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6160;AVGPOST=0.9963;RSQ=0.9932;ERATE=0.0006;THETA=0.0005;AC=1344;AN=2184 GT:DS:GL:BD 0.61538464 1
1 77949824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.1468;AVGPOST=0.9966;RSQ=0.9895;ERATE=0.0004;THETA=0.0002;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 77949840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1117;AVGPOST=0.9972;RSQ=0.9887;ERATE=0.0003;THETA=0.0005;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 77950014 . TTATAA T 307 PASS INDEL;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8456;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77950022 . TAA T 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6814;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77950031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0289;AVGPOST=0.9997;RSQ=0.9959;ERATE=0.0003;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77950133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0290;AVGPOST=0.9996;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77950430 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0286;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0008;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77950477 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5553;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77950495 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77950619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7399;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77950660 . C CA 341 PASS INDEL;BAVGPOST=0.996;BRSQ=0.572;LDAF=0.0062;AVGPOST=0.9954;RSQ=0.6878;ERATE=0.0008;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77950730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77950776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9794;AVGPOST=0.9984;RSQ=0.9732;ERATE=0.0004;THETA=0.0008;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 77950807 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77950901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9592;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77950976 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4031;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77951083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1269;AVGPOST=0.9986;RSQ=0.9949;ERATE=0.0005;THETA=0.0052;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 77951148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.887;LDAF=0.0202;AVGPOST=0.9963;RSQ=0.9301;ERATE=0.0003;THETA=0.0032;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77951246 . CATT C 70 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6419;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77951330 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1270;AVGPOST=0.9982;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 77951460 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.958;LDAF=0.4139;AVGPOST=0.9821;RSQ=0.9705;ERATE=0.0012;THETA=0.0006;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 77951462 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77951500 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7183;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77951519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0297;AVGPOST=0.9987;RSQ=0.9823;ERATE=0.0004;THETA=0.0070;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 77951560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0117;AVGPOST=0.9958;RSQ=0.8356;ERATE=0.0005;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77951666 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77951732 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77951948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77952054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77952110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0334;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 77952116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9252;ERATE=0.0017;THETA=0.0054;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77952119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0064;AVGPOST=0.9996;RSQ=0.9745;ERATE=0.0015;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77952156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.885;LDAF=0.0223;AVGPOST=0.9949;RSQ=0.9105;ERATE=0.0004;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77952176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3774;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77952215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0387;AVGPOST=0.9987;RSQ=0.9856;ERATE=0.0003;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 77952299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.938;LDAF=0.0598;AVGPOST=0.9883;RSQ=0.9264;ERATE=0.0006;THETA=0.0027;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 77952315 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.825;LDAF=0.1172;AVGPOST=0.9752;RSQ=0.9036;ERATE=0.0018;THETA=0.0005;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 77952332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.590;LDAF=0.0127;AVGPOST=0.9833;RSQ=0.4681;ERATE=0.0039;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77952346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7540;ERATE=0.0003;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77952390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77952473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77952475 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6668;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77952476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9180;ERATE=0.0003;THETA=0.0055;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77952608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0003;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77952669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1605;AVGPOST=0.9969;RSQ=0.9915;ERATE=0.0005;THETA=0.0017;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 77952730 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0388;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0003;THETA=0.0007;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 77952756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7903;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0004;THETA=0.0020;AC=1727;AN=2184 GT:DS:GL:BD 0.79075092 1
1 77952827 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0379;AVGPOST=0.9973;RSQ=0.9723;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 77952850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77952883 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8084;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77952901 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0320;AVGPOST=0.9988;RSQ=0.9834;ERATE=0.0003;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 77952927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0390;AVGPOST=0.9996;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 77952992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77953064 rs34425821 TA T 12345 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1474;AVGPOST=0.9970;RSQ=0.9910;ERATE=0.0005;THETA=0.0005;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 77953071 . AG A 54 PASS INDEL;BAVGPOST=0.986;BRSQ=0.285;LDAF=0.0113;AVGPOST=0.9862;RSQ=0.5160;ERATE=0.0007;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77953460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7885;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=1723;AN=2184 GT:DS:GL:BD 0.78891939 1
1 77953574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6886;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77953583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77953703 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8878;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77953815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7448;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77953825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0276;AVGPOST=0.9995;RSQ=0.9905;ERATE=0.0003;THETA=0.0007;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77954031 . A AT 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77954083 rs10635433 T TAC 118324 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.9331;AVGPOST=0.9967;RSQ=0.9827;ERATE=0.0003;THETA=0.0004;AC=2039;AN=2184 GT:DS:GL:BD 0.93360806 1
1 77954085 rs72506823 C CAG 27272 PASS INDEL;BAVGPOST=0.962;BRSQ=0.815;LDAF=0.8656;AVGPOST=0.9223;RSQ=0.7420;ERATE=0.0301;THETA=0.0002;AC=1945;AN=2184 GT:DS:GL:BD 0.89056778 1
1 77954162 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77954309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77954397 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1253;AVGPOST=0.9985;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 77954409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0834;AVGPOST=0.9992;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 77954542 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9407;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77954588 . T TCC 23602 PASS INDEL;BAVGPOST=0.947;BRSQ=0.790;LDAF=0.8333;AVGPOST=0.8962;RSQ=0.7084;ERATE=0.0468;THETA=0.0002;AC=1895;AN=2184 GT:DS:GL:BD 0.86767399 1
1 77954589 rs80133606 C CCA 117301 PASS INDEL;BAVGPOST=0.996;BRSQ=0.976;LDAF=0.9306;AVGPOST=0.9921;RSQ=0.9586;ERATE=0.0012;THETA=0.0003;AC=2036;AN=2184 GT:DS:GL:BD 0.93223441 1
1 77954591 rs74529290 A ACG 49737 PASS INDEL;BAVGPOST=0.945;BRSQ=0.787;LDAF=0.8334;AVGPOST=0.9045;RSQ=0.7323;ERATE=0.0435;THETA=0.0004;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 77954637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77954652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0275;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0007;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77954804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.1193;AVGPOST=0.9974;RSQ=0.9898;ERATE=0.0004;THETA=0.0005;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 77954849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8549;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77954895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0834;AVGPOST=0.9991;RSQ=0.9947;ERATE=0.0004;THETA=0.0005;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 77954905 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0832;AVGPOST=0.9983;RSQ=0.9909;ERATE=0.0003;THETA=0.0007;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 77954913 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77954940 rs60822634 AG A 19739 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1476;AVGPOST=0.9979;RSQ=0.9937;ERATE=0.0004;THETA=0.0005;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 77954969 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7341;ERATE=0.0009;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77955048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6927;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77955105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0831;AVGPOST=0.9994;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 77955140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8056;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77955181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7774;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77955334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0833;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 77955351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77955382 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77955453 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7322;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77955466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.951;LDAF=0.0271;AVGPOST=0.9987;RSQ=0.9792;ERATE=0.0003;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 77955515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0833;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 77955556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1472;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0004;THETA=0.0002;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 77955577 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7058;AVGPOST=0.9977;RSQ=0.9963;ERATE=0.0004;THETA=0.0002;AC=1541;AN=2184 GT:DS:GL:BD 0.70558608 1
1 77955621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0832;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 77955636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77955670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77955739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5735;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77955787 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.7875;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77955889 rs79848188 ATGG A 5094 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0384;AVGPOST=0.9989;RSQ=0.9867;ERATE=0.0005;THETA=0.0002;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 77955949 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0089;AVGPOST=0.9990;RSQ=0.9577;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77956082 . CA C 109 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4887;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77956121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5933;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77956290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5852;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77956355 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6710;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77956384 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0838;AVGPOST=0.9988;RSQ=0.9939;ERATE=0.0004;THETA=0.0004;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 77956482 . TA T 1242 PASS INDEL;BAVGPOST=0.984;BRSQ=0.893;LDAF=0.0764;AVGPOST=0.9924;RSQ=0.9617;ERATE=0.0008;THETA=0.0005;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 77956483 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.803;LDAF=0.1117;AVGPOST=0.9428;RSQ=0.7711;ERATE=0.0147;THETA=0.0003;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 77956543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4968;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77956723 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0838;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 77956733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0843;AVGPOST=0.9988;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 77956757 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77956950 . A AT 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77957077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.928;LDAF=0.0928;AVGPOST=0.9854;RSQ=0.9312;ERATE=0.0020;THETA=0.0002;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 77957172 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.9342;AVGPOST=0.9937;RSQ=0.9634;ERATE=0.0010;THETA=0.0003;AC=2043;AN=2184 GT:DS:GL:BD 0.93543959 1
1 77957236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1497;AVGPOST=0.9970;RSQ=0.9902;ERATE=0.0007;THETA=0.0002;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 77957279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.723;LDAF=0.0412;AVGPOST=0.9571;RSQ=0.5687;ERATE=0.0150;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77957282 . GCT G 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6474;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77957505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0839;AVGPOST=0.9994;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 77957618 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9808;AVGPOST=0.9991;RSQ=0.9841;ERATE=0.0004;THETA=0.0015;AC=2142;AN=2184 GT:DS:GL:BD 0.98076922 1
1 77957633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7625;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77957828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0407;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 77957829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0045;AVGPOST=0.9985;RSQ=0.8785;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77957906 . AAATT A 11472 PASS INDEL;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0846;AVGPOST=0.9992;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 77958010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4325;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77958021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8319;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77958048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5874;AVGPOST=0.9971;RSQ=0.9951;ERATE=0.0005;THETA=0.0002;AC=1281;AN=2184 GT:DS:GL:BD 0.58653843 1
1 77958105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2317;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 77958184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8330;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77958245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5337;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77958327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77958379 rs34581049 GA G 8318 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0863;AVGPOST=0.9971;RSQ=0.9849;ERATE=0.0008;THETA=0.0120;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77958488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0056;AVGPOST=0.9960;RSQ=0.7521;ERATE=0.0004;THETA=0.0073;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77958712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3252;AVGPOST=0.9959;RSQ=0.9927;ERATE=0.0005;THETA=0.0057;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 77958837 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5538;AVGPOST=0.9937;RSQ=0.9897;ERATE=0.0016;THETA=0.0003;AC=1211;AN=2184 GT:DS:GL:BD 0.55448717 1
1 77958874 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9671;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77958909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0059;AVGPOST=0.9974;RSQ=0.8350;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77958963 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77959013 . G GC 8590 PASS INDEL;BAVGPOST=0.978;BRSQ=0.933;LDAF=0.2017;AVGPOST=0.9697;RSQ=0.9241;ERATE=0.0062;THETA=0.0005;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 77959019 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7888;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77959019 . C CG 229 PASS INDEL;BAVGPOST=0.967;BRSQ=0.700;LDAF=0.0444;AVGPOST=0.9720;RSQ=0.7784;ERATE=0.0004;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 77959020 . C CG 2157 PASS INDEL;BAVGPOST=0.966;BRSQ=0.737;LDAF=0.0673;AVGPOST=0.9614;RSQ=0.7881;ERATE=0.0008;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 77959034 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8838;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77959036 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8768;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77959110 . TG T 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.5954;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77959200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77959201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77959209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77959297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0036;AVGPOST=0.9968;RSQ=0.7029;ERATE=0.0004;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77959317 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9400;ERATE=0.0003;THETA=0.0049;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77959374 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9322;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77959468 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9448;ERATE=0.0003;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77959484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6691;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77959674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1016;AVGPOST=0.9969;RSQ=0.9868;ERATE=0.0004;THETA=0.0005;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 77959711 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8956;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77959835 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77959910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77960117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77960140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3911;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0004;THETA=0.0005;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 77960190 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77960221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0116;AVGPOST=0.9993;RSQ=0.9731;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77960553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.674;LDAF=0.0076;AVGPOST=0.9974;RSQ=0.8794;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77960609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9858;ERATE=0.0004;THETA=0.0017;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77960612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.4452;AVGPOST=0.9939;RSQ=0.9899;ERATE=0.0010;THETA=0.0005;AC=974;AN=2184 GT:DS:GL:BD 0.44597068 0
1 77960628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0026;AVGPOST=0.9970;RSQ=0.5450;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77960641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6863;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77960756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1772;AVGPOST=0.9965;RSQ=0.9902;ERATE=0.0005;THETA=0.0002;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 77960762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.4454;AVGPOST=0.9947;RSQ=0.9916;ERATE=0.0007;THETA=0.0002;AC=974;AN=2184 GT:DS:GL:BD 0.44597068 0
1 77960769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77960789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1452;AVGPOST=0.9978;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 77960950 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8416;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77960983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77961011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77961038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77961040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0046;AVGPOST=0.9978;RSQ=0.8132;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77961074 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5317;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0004;THETA=0.0002;AC=1160;AN=2184 GT:DS:GL:BD 0.53113556 1
1 77961370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6469;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77961378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7635;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77961413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7280;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77961511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.921;LDAF=0.0208;AVGPOST=0.9982;RSQ=0.9620;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77961527 . T TA 718 PASS INDEL;BAVGPOST=0.953;BRSQ=0.799;LDAF=0.1176;AVGPOST=0.9491;RSQ=0.8322;ERATE=0.0014;THETA=0.0001;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 77961530 rs80329265 A AG 12630 PASS INDEL;BAVGPOST=0.987;BRSQ=0.953;LDAF=0.1772;AVGPOST=0.9943;RSQ=0.9833;ERATE=0.0007;THETA=0.0003;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 77961536 . G GA 747 PASS INDEL;BAVGPOST=0.953;BRSQ=0.794;LDAF=0.1199;AVGPOST=0.9540;RSQ=0.8486;ERATE=0.0009;THETA=0.0002;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 77961592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9826;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=2146;AN=2184 GT:DS:GL:BD 0.98260075 1
1 77961593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77961744 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0292;AVGPOST=0.9992;RSQ=0.9884;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77961769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77961837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5317;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=1160;AN=2184 GT:DS:GL:BD 0.53113556 1
1 77961887 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77961915 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77961919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0545;AVGPOST=0.9985;RSQ=0.9888;ERATE=0.0004;THETA=0.0004;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 77961967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5309;AVGPOST=0.9995;RSQ=0.9993;ERATE=0.0003;THETA=0.0008;AC=1159;AN=2184 GT:DS:GL:BD 0.53067768 1
1 77962380 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0290;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77962437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7062;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77962505 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0215;AVGPOST=0.9996;RSQ=0.9910;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77962551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8422;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77962679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9729;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77962708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0047;AVGPOST=0.9980;RSQ=0.8316;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77962870 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5147;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77962912 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0055;AVGPOST=0.9973;RSQ=0.8321;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77962934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.5142;AVGPOST=0.9917;RSQ=0.9882;ERATE=0.0006;THETA=0.0002;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 77962941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.5137;AVGPOST=0.9928;RSQ=0.9894;ERATE=0.0005;THETA=0.0008;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 77962992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0050;AVGPOST=0.9963;RSQ=0.7046;ERATE=0.0007;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77963014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9314;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77963039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0003;THETA=0.0011;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77963355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7599;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77963391 rs36083236 GC G 11039 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1798;AVGPOST=0.9944;RSQ=0.9856;ERATE=0.0008;THETA=0.0004;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 77963420 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7661;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77963427 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4769;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77963592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77963626 . AAC A 38528 PASS INDEL;BAVGPOST=0.979;BRSQ=0.962;LDAF=0.5084;AVGPOST=0.9755;RSQ=0.9627;ERATE=0.0067;THETA=0.0003;AC=1110;AN=2184 GT:DS:GL:BD 0.50824177 1
1 77963628 rs76158614 CAA C 91733 PASS INDEL;BAVGPOST=0.985;BRSQ=0.974;LDAF=0.5162;AVGPOST=0.9815;RSQ=0.9722;ERATE=0.0071;THETA=0.0002;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 77963854 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77963941 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7402;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77963984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77964056 . TGAAA T 234 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77964183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9421;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77964244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6947;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77964269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5173;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=1128;AN=2184 GT:DS:GL:BD 0.51648355 1
1 77964282 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.972;LDAF=0.0665;AVGPOST=0.9974;RSQ=0.9854;ERATE=0.0005;THETA=0.0005;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 77964283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9825;AVGPOST=0.9998;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=2146;AN=2184 GT:DS:GL:BD 0.98260075 1
1 77964339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3884;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=848;AN=2184 GT:DS:GL:BD 0.38827839 0
1 77964409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964440 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6008;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964479 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8800;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77964490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7705;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77964491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6644;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964530 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9022;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77964740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9999;RSQ=0.9310;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77964846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9728;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77964855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1513;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 77964866 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9267;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77964990 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77965072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7230;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77965289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1781;AVGPOST=0.9990;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 77965299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8971;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77965314 . T TG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.6073;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77965329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9801;AVGPOST=0.9986;RSQ=0.9753;ERATE=0.0003;THETA=0.0002;AC=2141;AN=2184 GT:DS:GL:BD 0.98031133 1
1 77965396 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.7289;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77965422 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8876;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77965442 . A AC 46 PASS INDEL;BAVGPOST=0.998;BRSQ=0.455;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5229;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77965699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8735;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77965772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6681;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77965853 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7475;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77965895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0041;AVGPOST=0.9977;RSQ=0.7941;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77966021 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77966120 rs80140023 CA C 42200 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3886;AVGPOST=0.9982;RSQ=0.9965;ERATE=0.0005;THETA=0.0030;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 77966183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77966230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.2711;AVGPOST=0.9972;RSQ=0.9941;ERATE=0.0005;THETA=0.0002;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 77966297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7319;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77966487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0065;AVGPOST=0.9982;RSQ=0.8976;ERATE=0.0006;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77966489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6167;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77966494 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0319;AVGPOST=0.9987;RSQ=0.9853;ERATE=0.0003;THETA=0.0011;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 77966560 rs34578405 GT G 26446 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4622;AVGPOST=0.9856;RSQ=0.9776;ERATE=0.0036;THETA=0.0002;AC=1007;AN=2184 GT:DS:GL:BD 0.46108058 0
1 77966652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8891;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77966683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.8036;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77966756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4615;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0001;AC=1009;AN=2184 GT:DS:GL:BD 0.46199635 0
1 77966879 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77966902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8483;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77967076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9798;AVGPOST=0.9990;RSQ=0.9820;ERATE=0.0003;THETA=0.0001;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 77967227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77967336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77967340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6661;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77967351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9578;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77967406 . T TG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77967496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7161;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77967507 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0398;AVGPOST=0.9981;RSQ=0.9792;ERATE=0.0003;THETA=0.0002;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 77967523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2217;AVGPOST=0.9964;RSQ=0.9926;ERATE=0.0004;THETA=0.0002;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 77967645 . T TA 18 PASS INDEL;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6903;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77967830 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4417;AVGPOST=0.9941;RSQ=0.9898;ERATE=0.0011;THETA=0.0004;AC=967;AN=2184 GT:DS:GL:BD 0.44276556 0
1 77967907 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6464;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77967945 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.8020;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77967947 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77968064 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.650;LDAF=0.0044;AVGPOST=0.9957;RSQ=0.6422;ERATE=0.0016;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77968086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77968327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8899;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77968351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77968356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3108;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 77968401 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1532;AVGPOST=0.9977;RSQ=0.9929;ERATE=0.0004;THETA=0.0003;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 77968443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1530;AVGPOST=0.9979;RSQ=0.9931;ERATE=0.0004;THETA=0.0002;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 77968488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77968573 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9207;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77968736 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 77968757 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9648;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77968804 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77968920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77968937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4778;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77968977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8142;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77968984 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6953;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77969021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6120;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77969034 . AAATG A 419 PASS INDEL;BAVGPOST=0.984;BRSQ=0.603;LDAF=0.0300;AVGPOST=0.9702;RSQ=0.5844;ERATE=0.0101;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77969036 rs72441287 ATGTT A 47275 PASS INDEL;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.3085;AVGPOST=0.9903;RSQ=0.9815;ERATE=0.0020;THETA=0.0005;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 77969121 . GTAT G 1098 PASS INDEL;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0050;AVGPOST=0.9981;RSQ=0.8223;ERATE=0.0009;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77969166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6119;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77969216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.7717;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77969298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77969322 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8812;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77969326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6746;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77969389 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0297;AVGPOST=0.9989;RSQ=0.9816;ERATE=0.0005;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 77969459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.975;LDAF=0.0737;AVGPOST=0.9984;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 77969584 . C CA 5175 PASS INDEL;BAVGPOST=0.971;BRSQ=0.895;LDAF=0.1814;AVGPOST=0.9342;RSQ=0.8221;ERATE=0.0107;THETA=0.0030;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 77969621 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1512;AVGPOST=0.9980;RSQ=0.9930;ERATE=0.0005;THETA=0.0003;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 77969663 rs71799333 CTT C 11754 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1508;AVGPOST=0.9968;RSQ=0.9893;ERATE=0.0006;THETA=0.0002;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 77969680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5614;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77969681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0293;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 77969838 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0295;AVGPOST=0.9995;RSQ=0.9914;ERATE=0.0004;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 77969940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0201;AVGPOST=0.9957;RSQ=0.9191;ERATE=0.0005;THETA=0.0029;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77969980 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7588;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77969980 MERGED_DEL_2_4056 CTTTTCTTTTTACAAAAAATAATACATCTTCATTCTAGAAAACGTGTATCAACAATAACAAAATCACAAACAGCCCAATACCTGGGAATGAATACTATTAGTATTTTGATTTATATTCCTCTTAGTTTTTTTCTGTGTATATATATATTTTTTTTAATATACATTTTTCATCAGAATGAGATCATATAAT C . . SV;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;CIEND=-19,31;CIPOS=-27,17;END=78000342;HOMLEN=2;HOMSEQ=TT;SOURCE=EMBLdelly_77969980_78000343,Geno GT:DS:GL:BD 0.00045788 0
1 77970004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0900;AVGPOST=0.9980;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 77970022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0305;AVGPOST=0.9983;RSQ=0.9786;ERATE=0.0003;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 77970076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6409;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77970116 . G GTA 10023 PASS INDEL;BAVGPOST=0.953;BRSQ=0.872;LDAF=0.2427;AVGPOST=0.9074;RSQ=0.8117;ERATE=0.0143;THETA=0.0002;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 77970126 rs66577468 A AT 41054 PASS INDEL;BAVGPOST=0.884;BRSQ=0.703;LDAF=0.7739;AVGPOST=0.8532;RSQ=0.6826;ERATE=0.0249;THETA=0.0005;AC=1733;AN=2184 GT:DS:GL:BD 0.79349816 1
1 77970128 rs66716943 T TA 1251 PASS INDEL;BAVGPOST=0.697;BRSQ=0.418;LDAF=0.3598;AVGPOST=0.7142;RSQ=0.5008;ERATE=0.0406;THETA=0.0002;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 77970224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5023;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77970504 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0157;AVGPOST=0.9993;RSQ=0.9809;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77970690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77970812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0300;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0003;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 77970894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0309;AVGPOST=0.9993;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 77971047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4076;AVGPOST=0.9976;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=889;AN=2184 GT:DS:GL:BD 0.40705130 0
1 77971082 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0872;AVGPOST=0.9984;RSQ=0.9919;ERATE=0.0004;THETA=0.0002;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 77971162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8019;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77971205 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2982;AVGPOST=0.9915;RSQ=0.9832;ERATE=0.0010;THETA=0.0006;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 77971301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5568;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77971417 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.706;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6748;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77971778 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0134;AVGPOST=0.9994;RSQ=0.9794;ERATE=0.0003;THETA=0.0060;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77971871 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6443;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77971939 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.898;LDAF=0.0137;AVGPOST=0.9970;RSQ=0.9150;ERATE=0.0005;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77971950 . AT A 5160 PASS INDEL;BAVGPOST=0.985;BRSQ=0.938;LDAF=0.1486;AVGPOST=0.9926;RSQ=0.9757;ERATE=0.0005;THETA=0.0002;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 77971956 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.927;LDAF=0.1698;AVGPOST=0.9723;RSQ=0.9240;ERATE=0.0076;THETA=0.0003;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 77971960 rs67811526 G GT 5778 PASS INDEL;BAVGPOST=0.981;BRSQ=0.939;LDAF=0.1498;AVGPOST=0.9936;RSQ=0.9791;ERATE=0.0005;THETA=0.0004;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 77971967 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.964;LDAF=0.1827;AVGPOST=0.9957;RSQ=0.9879;ERATE=0.0007;THETA=0.0005;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 77972104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6683;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77972118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4610;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77972411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9094;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77972481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0299;AVGPOST=0.9997;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 77972505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.923;LDAF=0.0234;AVGPOST=0.9983;RSQ=0.9677;ERATE=0.0005;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 77972683 . C CA 825 PASS INDEL;BAVGPOST=0.950;BRSQ=0.561;LDAF=0.1056;AVGPOST=0.8846;RSQ=0.4873;ERATE=0.0324;THETA=0.0005;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 77972708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77972728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7059;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77972730 . TG T 198 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77972790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6714;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77972835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8358;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77972860 . A AC 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5428;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77972985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0298;AVGPOST=0.9997;RSQ=0.9946;ERATE=0.0004;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 77972996 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0070;AVGPOST=0.9975;RSQ=0.8721;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77973010 . GGACACA G 1666 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0117;AVGPOST=0.9986;RSQ=0.9518;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77973086 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0892;AVGPOST=0.9994;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 77973202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0094;AVGPOST=0.9972;RSQ=0.8906;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77973282 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77973338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77973368 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0214;AVGPOST=0.9995;RSQ=0.9889;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77973450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77973512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77973552 . TA T 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5764;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77973558 . A AC 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77973560 . T TACAGC 116 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77973568 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0055;AVGPOST=0.9969;RSQ=0.7655;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77973711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6711;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77973721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9364;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77973813 . T TA 184 PASS INDEL;BAVGPOST=0.996;BRSQ=0.565;LDAF=0.0126;AVGPOST=0.9837;RSQ=0.4862;ERATE=0.0027;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77973871 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77973992 . TC T 385 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0044;AVGPOST=0.9972;RSQ=0.7483;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77974202 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.9944;AVGPOST=0.9979;RSQ=0.8693;ERATE=0.0003;THETA=0.0006;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 77974218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77974368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7996;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77974398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1829;AVGPOST=0.9936;RSQ=0.9830;ERATE=0.0010;THETA=0.0005;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 77974423 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9323;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77974484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3913;AVGPOST=0.9942;RSQ=0.9890;ERATE=0.0007;THETA=0.0005;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 77974522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0139;AVGPOST=0.9959;RSQ=0.8748;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77974530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.3909;AVGPOST=0.9929;RSQ=0.9866;ERATE=0.0010;THETA=0.0004;AC=853;AN=2184 GT:DS:GL:BD 0.39056778 0
1 77974531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0041;AVGPOST=0.9968;RSQ=0.7267;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77974600 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0035;AVGPOST=0.9968;RSQ=0.6783;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77974662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0298;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 77974725 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7313;ERATE=0.0009;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77974793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77974865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9228;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77974885 . A AC 173 PASS INDEL;BAVGPOST=0.997;BRSQ=0.812;LDAF=0.0082;AVGPOST=0.9963;RSQ=0.8235;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77975067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8349;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77975078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77975089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0202;AVGPOST=0.9979;RSQ=0.9565;ERATE=0.0004;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77975092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77975161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9551;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77975166 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5384;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77975220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0040;AVGPOST=0.9974;RSQ=0.7600;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77975261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77975437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0040;AVGPOST=0.9974;RSQ=0.7801;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77975526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0048;AVGPOST=0.9964;RSQ=0.7343;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77975557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77975826 rs67257855 CCACAGGCTCCTGGA C 29529 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0893;AVGPOST=0.9988;RSQ=0.9934;ERATE=0.0006;THETA=0.0003;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 77975849 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9225;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77976074 rs112209237 CA C 11100 PASS INDEL;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1492;AVGPOST=0.9973;RSQ=0.9909;ERATE=0.0005;THETA=0.0003;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 77976078 . TA T 11143 PASS INDEL;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1482;AVGPOST=0.9979;RSQ=0.9927;ERATE=0.0004;THETA=0.0004;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 77976117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1810;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0004;THETA=0.0002;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 77976195 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9213;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77976287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77976296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0297;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0003;THETA=0.0001;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 77976346 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7191;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77976349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6144;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77976453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.8719;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77976527 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9786;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77976598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.584;LDAF=0.0051;AVGPOST=0.9937;RSQ=0.5269;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77976907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.921;LDAF=0.0229;AVGPOST=0.9968;RSQ=0.9466;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77977021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0024;AVGPOST=0.9963;RSQ=0.4773;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77977089 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8251;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77977107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77977513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6347;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77977577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0726;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0008;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 77977578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77977669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77977697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7575;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77977735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6035;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77977879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77977896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8176;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77977914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6359;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77977927 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.523;LDAF=0.0083;AVGPOST=0.9908;RSQ=0.5819;ERATE=0.0018;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77977927 . TGA T 179 PASS INDEL;BAVGPOST=0.987;BRSQ=0.643;LDAF=0.0327;AVGPOST=0.9642;RSQ=0.5612;ERATE=0.0102;THETA=0.0001;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77977942 . CAG C 241 PASS INDEL;BAVGPOST=0.984;BRSQ=0.670;LDAF=0.0368;AVGPOST=0.9651;RSQ=0.5932;ERATE=0.0145;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 77977965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77977994 . TG T 510 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8802;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77978099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77978205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1512;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 77978211 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0112;AVGPOST=0.9977;RSQ=0.9230;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77978222 rs61162386 CT C 9188 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1900;AVGPOST=0.9860;RSQ=0.9653;ERATE=0.0010;THETA=0.0005;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 77978250 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77978417 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.5972;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77978537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.979;LDAF=0.0934;AVGPOST=0.9973;RSQ=0.9875;ERATE=0.0007;THETA=0.0003;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 77978636 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77978643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77978668 . AT A 107 PASS INDEL;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.6615;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77978847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77978897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77978972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0115;AVGPOST=0.9991;RSQ=0.9686;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77978987 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9895;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 77979040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6522;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77979120 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8998;ERATE=0.0003;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77979230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77979249 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3735;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77979327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0219;AVGPOST=0.9992;RSQ=0.9832;ERATE=0.0005;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77979379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7973;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77979457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0048;AVGPOST=0.9928;RSQ=0.4374;ERATE=0.0019;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77979467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0037;AVGPOST=0.9992;RSQ=0.9121;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77979807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5002;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77979933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9273;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77979952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.874;LDAF=0.0116;AVGPOST=0.9976;RSQ=0.9130;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77979995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77980047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0894;AVGPOST=0.9977;RSQ=0.9898;ERATE=0.0005;THETA=0.0004;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 77980154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8660;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77980171 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3140;ERATE=0.0009;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77980173 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8667;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77980219 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5535;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77980235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1503;AVGPOST=0.9987;RSQ=0.9955;ERATE=0.0004;THETA=0.0005;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 77980295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7798;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77980364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3625;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77980623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9313;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77980682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8681;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77980734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77980735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5543;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77980914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77981051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8152;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77981074 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9218;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77981099 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3902;AVGPOST=0.9960;RSQ=0.9927;ERATE=0.0006;THETA=0.0001;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 77981181 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77981232 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5914;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77981245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7754;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77981271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7258;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77981552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0027;AVGPOST=0.9962;RSQ=0.4930;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77981645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77981657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.6186;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77981701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1813;AVGPOST=0.9973;RSQ=0.9928;ERATE=0.0004;THETA=0.0003;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 77981789 . TA T 226 PASS INDEL;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7116;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77981798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6332;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77981810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77981880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7332;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77981918 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77981950 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0736;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 77981959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1504;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 77981968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0298;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 77982017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1504;AVGPOST=0.9988;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 77982046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0298;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 77982074 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8868;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77982113 rs36116132 G GA 8068 PASS INDEL;BAVGPOST=0.968;BRSQ=0.891;LDAF=0.1818;AVGPOST=0.9372;RSQ=0.8301;ERATE=0.0213;THETA=0.0003;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 77982146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0090;AVGPOST=0.9983;RSQ=0.9171;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77982182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77982335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77982343 rs80233576 C CT 20091 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1973;AVGPOST=0.9979;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 77982355 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4773;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77982412 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77982571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77982682 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0054;AVGPOST=0.9968;RSQ=0.7748;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77982734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0218;AVGPOST=0.9990;RSQ=0.9791;ERATE=0.0006;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77982979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77983139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77983188 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5455;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77983237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5616;AVGPOST=0.9959;RSQ=0.9934;ERATE=0.0008;THETA=0.0003;AC=1228;AN=2184 GT:DS:GL:BD 0.56227106 1
1 77983289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1974;AVGPOST=0.9983;RSQ=0.9952;ERATE=0.0004;THETA=0.0004;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 77983380 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8385;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77983394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9898;AVGPOST=0.9988;RSQ=0.9568;ERATE=0.0003;THETA=0.0002;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 77983594 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77983664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77983918 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77983932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8973;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77984052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77984349 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77984384 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77984448 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77984479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77984655 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77984878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9797;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77984884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5270;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77984923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0738;AVGPOST=0.9991;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 77984996 . GCTGT G 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.7340;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77985169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9147;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77985198 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8559;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77985441 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77985453 rs112996275 AGTGATGACAACCAGAG A 21194 PASS INDEL;BAVGPOST=0.971;BRSQ=0.889;LDAF=0.1434;AVGPOST=0.9926;RSQ=0.9761;ERATE=0.0003;THETA=0.0005;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 77985570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6460;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77985592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77985613 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.935;LDAF=0.0101;AVGPOST=0.9976;RSQ=0.9110;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77985631 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77985655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0071;AVGPOST=0.9967;RSQ=0.8050;ERATE=0.0005;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77985729 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0335;AVGPOST=0.9986;RSQ=0.9794;ERATE=0.0005;THETA=0.0001;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 77985760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77985832 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.712;LDAF=0.0051;AVGPOST=0.9969;RSQ=0.7438;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77985948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0331;AVGPOST=0.9994;RSQ=0.9910;ERATE=0.0004;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 77986114 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77986162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9732;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77986281 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7710;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77986413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0330;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 77986516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3760;AVGPOST=0.9959;RSQ=0.9924;ERATE=0.0003;THETA=0.0005;AC=821;AN=2184 GT:DS:GL:BD 0.37591577 0
1 77986638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1486;AVGPOST=0.9973;RSQ=0.9923;ERATE=0.0005;THETA=0.0007;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 77986710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9447;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77986797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7817;ERATE=0.0005;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77986821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.596;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4903;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77986851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1681;AVGPOST=0.9940;RSQ=0.9823;ERATE=0.0007;THETA=0.0007;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 77986975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.8001;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77987287 . CAATT C 45 PASS INDEL;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5942;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77987413 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77987432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77987508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77987556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77987594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77987635 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77987652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77987664 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77987778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9884;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77987814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0298;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0053;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 77988119 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0207;AVGPOST=0.9969;RSQ=0.9383;ERATE=0.0005;THETA=0.0091;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 77988216 . CG C 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7651;ERATE=0.0005;THETA=0.0046;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77988220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8694;ERATE=0.0003;THETA=0.0047;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77988250 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6006;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77988371 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.980;LDAF=0.1891;AVGPOST=0.9935;RSQ=0.9823;ERATE=0.0008;THETA=0.0007;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 77988386 . CACTCTGGGCCAG C 924 PASS INDEL;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0063;AVGPOST=0.9921;RSQ=0.5515;ERATE=0.0007;THETA=0.0026;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77988401 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7640;ERATE=0.0003;THETA=0.0067;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77988472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1900;AVGPOST=0.9963;RSQ=0.9896;ERATE=0.0006;THETA=0.0004;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 77988573 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0218;AVGPOST=0.9991;RSQ=0.9840;ERATE=0.0003;THETA=0.0012;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77988584 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7865;ERATE=0.0003;THETA=0.0068;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77988668 . T TG 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5025;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77988885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.4658;AVGPOST=0.9899;RSQ=0.9853;ERATE=0.0018;THETA=0.0020;AC=1017;AN=2184 GT:DS:GL:BD 0.46565935 0
1 77988921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8680;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77988959 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0528;AVGPOST=0.9967;RSQ=0.9733;ERATE=0.0004;THETA=0.0009;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 77989174 . T TG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4906;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77989181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5258;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77989274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77989281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6474;ERATE=0.0003;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77989401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.8942;AVGPOST=0.9927;RSQ=0.9751;ERATE=0.0004;THETA=0.0023;AC=1955;AN=2184 GT:DS:GL:BD 0.89514655 1
1 77989402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.8224;ERATE=0.0006;THETA=0.0026;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77989422 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.8952;AVGPOST=0.9918;RSQ=0.9694;ERATE=0.0004;THETA=0.0037;AC=1959;AN=2184 GT:DS:GL:BD 0.89697802 1
1 77989479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7804;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77989628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5470;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77989784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0241;AVGPOST=0.9981;RSQ=0.9711;ERATE=0.0003;THETA=0.0018;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 77989866 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77989923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2173;AVGPOST=0.9888;RSQ=0.9779;ERATE=0.0007;THETA=0.0115;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 77989928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77990028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.971;LDAF=0.1924;AVGPOST=0.9839;RSQ=0.9589;ERATE=0.0009;THETA=0.0037;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 77990109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0003;THETA=0.0136;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77990110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7492;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77990310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9243;ERATE=0.0003;THETA=0.0208;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77990380 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0051;AVGPOST=0.9963;RSQ=0.7320;ERATE=0.0005;THETA=0.0148;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77990398 . GT G 75 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77990414 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0004;THETA=0.0062;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77990485 . CAAG C 544 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0043;AVGPOST=0.9971;RSQ=0.7606;ERATE=0.0003;THETA=0.0176;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77990502 . AT A 4549 PASS INDEL;BAVGPOST=0.883;BRSQ=0.794;LDAF=0.3212;AVGPOST=0.8792;RSQ=0.8125;ERATE=0.0123;THETA=0.0090;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 77990503 rs112973258 TC T 32602 PASS INDEL;BAVGPOST=0.956;BRSQ=0.932;LDAF=0.4318;AVGPOST=0.9472;RSQ=0.9257;ERATE=0.0080;THETA=0.0026;AC=936;AN=2184 GT:DS:GL:BD 0.42857143 0
1 77990507 . CA C 2297 PASS INDEL;BAVGPOST=0.870;BRSQ=0.782;LDAF=0.3032;AVGPOST=0.8801;RSQ=0.8111;ERATE=0.0057;THETA=0.0019;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 77990514 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0140;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77990516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.947;LDAF=0.0336;AVGPOST=0.9955;RSQ=0.9485;ERATE=0.0012;THETA=0.0248;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 77990556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77990582 . A AGTTT 194 PASS INDEL;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0024;AVGPOST=0.9972;RSQ=0.6081;ERATE=0.0004;THETA=0.0057;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77990675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77990702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0044;AVGPOST=0.9970;RSQ=0.7253;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77990799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.939;LDAF=0.0785;AVGPOST=0.9879;RSQ=0.9444;ERATE=0.0007;THETA=0.0198;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 77990880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0066;AVGPOST=0.9976;RSQ=0.8539;ERATE=0.0004;THETA=0.0041;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77990925 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9617;ERATE=0.0003;THETA=0.0231;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77991029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5628;AVGPOST=0.9922;RSQ=0.9896;ERATE=0.0004;THETA=0.0005;AC=1226;AN=2184 GT:DS:GL:BD 0.56135529 1
1 77991037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5632;AVGPOST=0.9931;RSQ=0.9905;ERATE=0.0003;THETA=0.0049;AC=1228;AN=2184 GT:DS:GL:BD 0.56227106 1
1 77991051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77991059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5399;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77991129 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.897;LDAF=0.0119;AVGPOST=0.9978;RSQ=0.9300;ERATE=0.0003;THETA=0.0054;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77991168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0545;AVGPOST=0.9974;RSQ=0.9791;ERATE=0.0004;THETA=0.0008;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 77991202 . T TGA 225 PASS INDEL;BAVGPOST=0.997;BRSQ=0.786;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7347;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77991253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1455;AVGPOST=0.9943;RSQ=0.9822;ERATE=0.0005;THETA=0.0005;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 77991258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9486;ERATE=0.0003;THETA=0.0026;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77991312 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0233;AVGPOST=0.9992;RSQ=0.9858;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 77991316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9404;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77991336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7958;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77991367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77991392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8457;ERATE=0.0003;THETA=0.0029;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77991508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6293;AVGPOST=0.9960;RSQ=0.9939;ERATE=0.0005;THETA=0.0010;AC=1373;AN=2184 GT:DS:GL:BD 0.62866300 1
1 77991525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6814;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77991724 . TCGA T 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77991774 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0092;AVGPOST=0.9995;RSQ=0.9764;ERATE=0.0003;THETA=0.0013;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77991793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77991807 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77991877 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4685;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77992019 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77992101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5887;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77992129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4689;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77992199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0140;AVGPOST=0.9968;RSQ=0.9054;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77992212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7525;ERATE=0.0005;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77992216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0041;AVGPOST=0.9957;RSQ=0.5630;ERATE=0.0007;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77992224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0043;AVGPOST=0.9950;RSQ=0.5046;ERATE=0.0010;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77992246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.683;LDAF=0.0096;AVGPOST=0.9934;RSQ=0.7065;ERATE=0.0007;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77992354 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.475;LDAF=0.0100;AVGPOST=0.9857;RSQ=0.4426;ERATE=0.0008;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77992361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.909;LDAF=0.6063;AVGPOST=0.9666;RSQ=0.9521;ERATE=0.0015;THETA=0.0009;AC=1342;AN=2184 GT:DS:GL:BD 0.61446887 1
1 77992673 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0083;AVGPOST=0.9986;RSQ=0.9428;ERATE=0.0005;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77992695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7023;AVGPOST=0.9978;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=1535;AN=2184 GT:DS:GL:BD 0.70283884 1
1 77992738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77992740 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9376;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77993006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0090;AVGPOST=0.9996;RSQ=0.9847;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77993078 . CA C 73 PASS INDEL;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5314;ERATE=0.0007;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77993122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6312;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77993207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8587;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77993210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6800;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77993235 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77993254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77993472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6883;AVGPOST=0.9975;RSQ=0.9947;ERATE=0.0007;THETA=0.0004;AC=1504;AN=2184 GT:DS:GL:BD 0.68864471 1
1 77993476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8667;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77993515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.3660;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77993523 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7447;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77993565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5599;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77993574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0084;AVGPOST=0.9993;RSQ=0.9634;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77993625 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8924;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77993732 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6508;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77993969 rs112387474 T TA 1167 PASS INDEL;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0134;AVGPOST=0.9976;RSQ=0.9335;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77994021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5305;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77994063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9241;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77994068 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77994157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 77994222 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5954;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77994269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0680;AVGPOST=0.9980;RSQ=0.9880;ERATE=0.0004;THETA=0.0006;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 77994324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0138;AVGPOST=0.9986;RSQ=0.9579;ERATE=0.0003;THETA=0.0012;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77994483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7687;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77994517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6323;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77994698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7999;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77994703 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9477;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77994742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77994763 . TATGAAA T 277 PASS INDEL;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0031;AVGPOST=0.9974;RSQ=0.6413;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77994796 rs72149173 ATAAC A 72868 PASS INDEL;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6244;AVGPOST=0.9919;RSQ=0.9873;ERATE=0.0013;THETA=0.0005;AC=1366;AN=2184 GT:DS:GL:BD 0.62545788 1
1 77994813 . GATA G 200 PASS INDEL;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9464;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77994888 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1229;AVGPOST=0.9968;RSQ=0.9883;ERATE=0.0003;THETA=0.0008;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 77994978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6554;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77994985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6318;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77994993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6950;AVGPOST=0.9963;RSQ=0.9930;ERATE=0.0006;THETA=0.0005;AC=1520;AN=2184 GT:DS:GL:BD 0.69597071 1
1 77995026 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8039;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77995041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.884;LDAF=0.5687;AVGPOST=0.8851;RSQ=0.8307;ERATE=0.0219;THETA=0.0005;AC=1279;AN=2184 GT:DS:GL:BD 0.58562273 1
1 77995067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0144;AVGPOST=0.9977;RSQ=0.9381;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77995105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0086;AVGPOST=0.9939;RSQ=0.7381;ERATE=0.0008;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77995166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7081;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77995167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8898;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77995481 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8297;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77995637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0103;AVGPOST=0.9972;RSQ=0.8869;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77995656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77995789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9761;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77995806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6529;AVGPOST=0.9956;RSQ=0.9929;ERATE=0.0028;THETA=0.0005;AC=1427;AN=2184 GT:DS:GL:BD 0.65338826 1
1 77995922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77995947 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9997;RSQ=0.9856;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77995957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9600;ERATE=0.0005;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77995960 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77995963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6025;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77995965 . GA G 214 PASS INDEL;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.8062;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77996101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6229;AVGPOST=0.9968;RSQ=0.9956;ERATE=0.0005;THETA=0.0006;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 77996250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77996342 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9177;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77996503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7800;ERATE=0.0015;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77996572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77996726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8936;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77996752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5853;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77996764 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5560;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77996778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7023;AVGPOST=0.9938;RSQ=0.9887;ERATE=0.0010;THETA=0.0006;AC=1536;AN=2184 GT:DS:GL:BD 0.70329672 1
1 77996821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9186;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77996993 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8307;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77997005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8983;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77997083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.8999;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77997105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.5324;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77997210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.881;LDAF=0.0228;AVGPOST=0.9915;RSQ=0.8687;ERATE=0.0008;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77997227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0071;AVGPOST=0.9979;RSQ=0.8690;ERATE=0.0005;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77997296 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.546;LDAF=0.0028;AVGPOST=0.9956;RSQ=0.3495;ERATE=0.0008;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77997517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0079;AVGPOST=0.9896;RSQ=0.4839;ERATE=0.0013;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77997590 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.773;LDAF=0.0350;AVGPOST=0.9813;RSQ=0.7865;ERATE=0.0017;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77997659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.907;LDAF=0.0553;AVGPOST=0.9562;RSQ=0.6952;ERATE=0.0010;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 77997690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.877;LDAF=0.0427;AVGPOST=0.9921;RSQ=0.9225;ERATE=0.0008;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 77997740 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.960;LDAF=0.0796;AVGPOST=0.9799;RSQ=0.8907;ERATE=0.0020;THETA=0.0007;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 77997768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0246;AVGPOST=0.9976;RSQ=0.9603;ERATE=0.0005;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77997769 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.738;LDAF=0.0311;AVGPOST=0.9657;RSQ=0.5585;ERATE=0.0009;THETA=0.0009;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 77997791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.372;LDAF=0.0107;AVGPOST=0.9891;RSQ=0.5732;ERATE=0.0012;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77997804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.521;LDAF=0.0081;AVGPOST=0.9904;RSQ=0.5096;ERATE=0.0008;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77998084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.722;LDAF=0.0152;AVGPOST=0.9883;RSQ=0.7268;ERATE=0.0007;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77998115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9771;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77998207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77998208 . T TC 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77998281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0233;AVGPOST=0.9996;RSQ=0.9927;ERATE=0.0003;THETA=0.0028;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 77998285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0224;AVGPOST=0.9988;RSQ=0.9757;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 77998471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0082;AVGPOST=0.9996;RSQ=0.9820;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77998479 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6268;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77998656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77998761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9336;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77998764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.6206;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0005;THETA=0.0028;AC=1355;AN=2184 GT:DS:GL:BD 0.62042123 1
1 77998791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77998858 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5228;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77999174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.3933;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77999188 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.976;LDAF=0.1234;AVGPOST=0.9907;RSQ=0.9646;ERATE=0.0007;THETA=0.0006;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 77999212 . A AC 139 PASS INDEL;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.5984;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77999244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0112;AVGPOST=0.9959;RSQ=0.8557;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77999279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77999318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5202;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77999357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8811;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77999360 . AT A 99 PASS INDEL;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77999471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6934;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=1514;AN=2184 GT:DS:GL:BD 0.69322342 1
1 77999663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9578;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77999798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5309;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77999809 . TTC T 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77999812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77999814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0082;AVGPOST=0.9997;RSQ=0.9862;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77999827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77999875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9889;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77999925 . CAG C 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77999946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6918;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=1511;AN=2184 GT:DS:GL:BD 0.69184983 1
1 78000034 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6980;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78000058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6202;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=1353;AN=2184 GT:DS:GL:BD 0.61950547 1
1 78000108 rs34641015 C CT 5352 PASS INDEL;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0235;AVGPOST=0.9995;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78000143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0081;AVGPOST=0.9996;RSQ=0.9798;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78000171 . G GT 275 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78000173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9045;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78000192 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8774;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78000219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78000241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78000434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0118;AVGPOST=0.9981;RSQ=0.9403;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78000484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6078;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78000523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78000538 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78000558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0200;AVGPOST=0.9979;RSQ=0.9641;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78000588 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78000615 . TG T 101 PASS INDEL;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6230;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78000646 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8198;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78000712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5980;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78000720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6776;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78000753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6798;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78000773 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9508;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78000805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4714;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78000897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78000908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78000988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78001093 rs111483678 GAC G 180 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7525;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78001142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9040;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78001179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78001287 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6931;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=1514;AN=2184 GT:DS:GL:BD 0.69322342 1
1 78001295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78001300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78001371 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0017;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78001520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78001570 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0026;AVGPOST=0.9996;RSQ=0.9515;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78001627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78001667 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78001675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78001700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78001771 . T TA 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78001805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78001844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78001881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.9763;AVGPOST=0.9991;RSQ=0.9842;ERATE=0.0003;THETA=0.0004;AC=2133;AN=2184 GT:DS:GL:BD 0.97664833 1
1 78001922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6083;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78001941 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78001947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6758;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0007;THETA=0.0006;AC=1475;AN=2184 GT:DS:GL:BD 0.67536628 1
1 78001985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.4879;ERATE=0.0007;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78002022 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9158;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78002042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0191;AVGPOST=0.9984;RSQ=0.9644;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78002043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78002062 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9975;RSQ=0.9066;ERATE=0.0006;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78002086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5973;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78002215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9993;RSQ=0.9783;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78002246 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78002756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78002785 . AC A 13 PASS INDEL;BAVGPOST=0.998;BRSQ=0.663;LDAF=0.0030;AVGPOST=0.9969;RSQ=0.5783;ERATE=0.0013;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78002800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4898;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78002912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7499;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78002964 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78003026 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78003053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78003085 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6935;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=1516;AN=2184 GT:DS:GL:BD 0.69413918 1
1 78003114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78003226 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7968;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78003457 . AC A 128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0033;AVGPOST=0.9991;RSQ=0.8920;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78003526 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0184;AVGPOST=0.9988;RSQ=0.9734;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 78003571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78003584 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6934;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0005;THETA=0.0007;AC=1514;AN=2184 GT:DS:GL:BD 0.69322342 1
1 78003726 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9290;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78003752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0233;AVGPOST=0.9997;RSQ=0.9945;ERATE=0.0003;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78003764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6197;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0005;THETA=0.0004;AC=1353;AN=2184 GT:DS:GL:BD 0.61950547 1
1 78003855 . C CT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78003891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5554;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78003990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8664;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78004023 . C CA 1851 PASS INDEL;BAVGPOST=0.842;BRSQ=0.409;LDAF=0.2095;AVGPOST=0.7787;RSQ=0.4450;ERATE=0.0446;THETA=0.0002;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 78004033 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.892;BRSQ=0.766;LDAF=0.5451;AVGPOST=0.8549;RSQ=0.7323;ERATE=0.0755;THETA=0.0003;AC=1195;AN=2184 GT:DS:GL:BD 0.54716116 1
1 78004171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.8072;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78004204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0233;AVGPOST=0.9990;RSQ=0.9816;ERATE=0.0004;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78004340 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.902;LDAF=0.0215;AVGPOST=0.9920;RSQ=0.8494;ERATE=0.0014;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78004350 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.703;LDAF=0.0072;AVGPOST=0.9911;RSQ=0.5380;ERATE=0.0008;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78004360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5041;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78004451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78004458 . C CT 486 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9446;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78004477 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8570;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78004584 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0104;AVGPOST=0.9963;RSQ=0.8710;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78004729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78004778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78004880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78004996 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9651;ERATE=0.0004;THETA=0.0080;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78005119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0060;AVGPOST=0.9992;RSQ=0.9451;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78005179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6231;AVGPOST=0.9862;RSQ=0.9815;ERATE=0.0048;THETA=0.0004;AC=1361;AN=2184 GT:DS:GL:BD 0.62316847 1
1 78005262 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9039;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78005390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0087;AVGPOST=0.9984;RSQ=0.9328;ERATE=0.0003;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78005444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0618;AVGPOST=0.9983;RSQ=0.9903;ERATE=0.0004;THETA=0.0005;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 78005513 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9503;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78005661 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.1264;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78005830 . TCAAA T 278 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6250;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78005837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7079;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78005951 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0235;AVGPOST=0.9996;RSQ=0.9928;ERATE=0.0003;THETA=0.0011;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78006074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.821;LDAF=0.0075;AVGPOST=0.9950;RSQ=0.7499;ERATE=0.0006;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78006080 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78006124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1741;AVGPOST=0.9904;RSQ=0.9770;ERATE=0.0004;THETA=0.0002;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 78006179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9680;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78006340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6193;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=1352;AN=2184 GT:DS:GL:BD 0.61904764 1
1 78006448 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6737;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78006458 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0246;AVGPOST=0.9975;RSQ=0.9649;ERATE=0.0003;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78006490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6702;AVGPOST=0.9978;RSQ=0.9966;ERATE=0.0005;THETA=0.0008;AC=1464;AN=2184 GT:DS:GL:BD 0.67032969 1
1 78006631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.938;LDAF=0.6643;AVGPOST=0.9316;RSQ=0.8827;ERATE=0.0154;THETA=0.0006;AC=1477;AN=2184 GT:DS:GL:BD 0.67628205 1
1 78006674 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4741;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78006765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8536;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78006883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0028;AVGPOST=0.9969;RSQ=0.5507;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78006890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0250;AVGPOST=0.9990;RSQ=0.9826;ERATE=0.0003;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78006954 . CA C 34 PASS INDEL;BAVGPOST=0.990;BRSQ=0.078;LDAF=0.0615;AVGPOST=0.9185;RSQ=0.4572;ERATE=0.0020;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 78006966 . AGGCGT A 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.5105;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78006970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7457;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78006996 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0047;AVGPOST=0.9986;RSQ=0.8834;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78007206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0070;AVGPOST=0.9984;RSQ=0.9118;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78007217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0047;AVGPOST=0.9980;RSQ=0.8554;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78007257 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78007276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0270;AVGPOST=0.9993;RSQ=0.9890;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78007354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0060;AVGPOST=0.9979;RSQ=0.8459;ERATE=0.0006;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78007388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6506;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78007509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9606;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78007524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9642;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78007623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1229;AVGPOST=0.9947;RSQ=0.9798;ERATE=0.0004;THETA=0.0003;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 78007640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5796;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78007670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7813;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78007742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4692;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78007862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.720;LDAF=0.0051;AVGPOST=0.9964;RSQ=0.7285;ERATE=0.0011;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78007879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0024;AVGPOST=0.9966;RSQ=0.4550;ERATE=0.0007;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78007881 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0245;AVGPOST=0.9981;RSQ=0.9737;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78007932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.976;LDAF=0.6872;AVGPOST=0.9778;RSQ=0.9619;ERATE=0.0051;THETA=0.0018;AC=1506;AN=2184 GT:DS:GL:BD 0.68956041 1
1 78007948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7795;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78008080 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9574;ERATE=0.0003;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78008104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6189;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=1352;AN=2184 GT:DS:GL:BD 0.61904764 1
1 78008113 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9479;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78008178 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78008270 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78008384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8551;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78008458 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78008459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.7368;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78008469 rs112537743 G GT 2118 PASS INDEL;BAVGPOST=0.996;BRSQ=0.947;LDAF=0.0281;AVGPOST=0.9948;RSQ=0.9306;ERATE=0.0010;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78008487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0247;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78008499 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.791;LDAF=0.0073;AVGPOST=0.9936;RSQ=0.6750;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78008522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7735;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78008523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.4790;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78008561 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0247;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78008646 rs113504883 G GAC 3921 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0249;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78008652 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6952;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0007;AC=1519;AN=2184 GT:DS:GL:BD 0.69551283 1
1 78008755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.4774;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78008785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0062;AVGPOST=0.9990;RSQ=0.9319;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78008864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6183;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 78009011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78009105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8329;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78009148 rs67558983 TTGAC T 84118 PASS INDEL;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.6174;AVGPOST=0.9932;RSQ=0.9894;ERATE=0.0013;THETA=0.0005;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 78009213 . T TC 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6230;ERATE=0.0006;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78009241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9996;RSQ=0.9934;ERATE=0.0003;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78009276 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5734;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78009285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78009376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9656;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78009448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0176;AVGPOST=0.9993;RSQ=0.9812;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78009501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78009570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5798;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78009638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78009755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9169;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78009864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6182;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0005;THETA=0.0006;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 78009882 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0149;AVGPOST=0.9981;RSQ=0.9529;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78009940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78010021 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8632;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78010118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9537;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78010135 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0245;AVGPOST=0.9964;RSQ=0.9385;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78010282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78010334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7942;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78010338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78010387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6998;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78010412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5756;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78010650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6950;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=1518;AN=2184 GT:DS:GL:BD 0.69505495 1
1 78010666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78010681 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78010741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0256;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0003;THETA=0.0009;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78010770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5658;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78010795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78010825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8708;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78010868 . CTTA C 380 PASS INDEL;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7478;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78010920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0010;AVGPOST=0.9984;RSQ=0.3082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78010997 . G GACAC 370 PASS INDEL;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9026;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78011007 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5205;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78011180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7594;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78011209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9801;ERATE=0.0003;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78011255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78011301 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7141;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78011357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.2993;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78011367 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0041;AVGPOST=0.9983;RSQ=0.8224;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78011533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78011627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78011698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78011703 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78011777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78011865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7720;ERATE=0.0015;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78011910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8241;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78011974 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78011998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7230;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78012010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8186;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78012116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6439;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=1406;AN=2184 GT:DS:GL:BD 0.64377290 1
1 78012161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78012230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9274;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78012350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.5849;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78012374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7242;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78012382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6575;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78012427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0499;AVGPOST=0.9983;RSQ=0.9846;ERATE=0.0003;THETA=0.0007;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 78012474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78012511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6191;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0003;THETA=0.0006;AC=1352;AN=2184 GT:DS:GL:BD 0.61904764 1
1 78012582 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0117;AVGPOST=0.9979;RSQ=0.9251;ERATE=0.0004;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78012588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78012625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7825;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78012681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0041;AVGPOST=0.9963;RSQ=0.6420;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78012804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5069;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78012911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7709;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78013155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9287;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78013301 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6210;AVGPOST=0.9957;RSQ=0.9940;ERATE=0.0004;THETA=0.0007;AC=1353;AN=2184 GT:DS:GL:BD 0.61950547 1
1 78013311 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4919;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78013373 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9044;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78013548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7538;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78013756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5883;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78013771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6180;AVGPOST=0.9960;RSQ=0.9939;ERATE=0.0012;THETA=0.0004;AC=1349;AN=2184 GT:DS:GL:BD 0.61767399 1
1 78013811 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7199;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78013891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78013997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0266;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78014010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5407;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78014012 . AC A 194 PASS INDEL;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0054;AVGPOST=0.9954;RSQ=0.7036;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78014034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78014041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78014042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.7025;AVGPOST=0.9961;RSQ=0.9933;ERATE=0.0014;THETA=0.0005;AC=1532;AN=2184 GT:DS:GL:BD 0.70146519 1
1 78014130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78014220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5526;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78014238 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78014279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0123;AVGPOST=0.9992;RSQ=0.9735;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78014341 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78014345 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0240;AVGPOST=0.9991;RSQ=0.9853;ERATE=0.0003;THETA=0.0030;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78014360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78014463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0238;AVGPOST=0.9992;RSQ=0.9865;ERATE=0.0004;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78014538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0120;AVGPOST=0.9979;RSQ=0.9315;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78014677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.4129;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78014712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.6178;AVGPOST=0.9963;RSQ=0.9948;ERATE=0.0005;THETA=0.0004;AC=1347;AN=2184 GT:DS:GL:BD 0.61675823 1
1 78014983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5841;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78015080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78015092 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7313;ERATE=0.0010;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78015305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78015516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78015556 rs71075752 C CTGGA 111349 PASS INDEL;BAVGPOST=0.978;BRSQ=0.971;LDAF=0.6089;AVGPOST=0.9775;RSQ=0.9678;ERATE=0.0049;THETA=0.0003;AC=1338;AN=2184 GT:DS:GL:BD 0.61263734 1
1 78015648 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9352;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78015648 . T TA 13395 PASS INDEL;BAVGPOST=0.863;BRSQ=0.779;LDAF=0.5566;AVGPOST=0.8441;RSQ=0.7808;ERATE=0.0216;THETA=0.0003;AC=1285;AN=2184 GT:DS:GL:BD 0.58836997 1
1 78015649 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.953;LDAF=0.6458;AVGPOST=0.9552;RSQ=0.9279;ERATE=0.0115;THETA=0.0006;AC=1425;AN=2184 GT:DS:GL:BD 0.65247256 1
1 78015720 . AT A 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78015741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6188;AVGPOST=0.9956;RSQ=0.9934;ERATE=0.0009;THETA=0.0003;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 78015833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9988;RSQ=0.3334;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78015898 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78016054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6194;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=1352;AN=2184 GT:DS:GL:BD 0.61904764 1
1 78016203 . C CA 142 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4947;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78016218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78016233 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9427;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78016308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7651;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78016409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8494;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78016476 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78016486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0277;AVGPOST=0.9992;RSQ=0.9877;ERATE=0.0004;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 78016517 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6976;AVGPOST=0.9949;RSQ=0.9906;ERATE=0.0010;THETA=0.0006;AC=1526;AN=2184 GT:DS:GL:BD 0.69871795 1
1 78016950 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9417;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78016975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6636;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78016994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78017021 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8623;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78017168 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78017220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9092;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78017485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78017494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78017571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6186;AVGPOST=0.9960;RSQ=0.9942;ERATE=0.0024;THETA=0.0009;AC=1349;AN=2184 GT:DS:GL:BD 0.61767399 1
1 78017574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0268;AVGPOST=0.9992;RSQ=0.9904;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78017696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6858;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78017741 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8620;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78017850 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7864;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78018015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78018041 . TC T 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78018184 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6180;AVGPOST=0.9969;RSQ=0.9960;ERATE=0.0004;THETA=0.0007;AC=1349;AN=2184 GT:DS:GL:BD 0.61767399 1
1 78018281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9387;ERATE=0.0004;THETA=0.0033;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78018299 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9250;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78018554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0003;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78018805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6361;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78018844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0282;AVGPOST=0.9973;RSQ=0.9684;ERATE=0.0004;THETA=0.0011;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 78018949 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9311;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78019030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78019045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78019046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78019123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0200;AVGPOST=0.9993;RSQ=0.9859;ERATE=0.0003;THETA=0.0031;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78019155 . A ATT 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0038;AVGPOST=0.9983;RSQ=0.8104;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78019286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78019396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78019442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9139;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78019535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9993;RSQ=0.9883;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78019552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6880;AVGPOST=0.9967;RSQ=0.9940;ERATE=0.0004;THETA=0.0003;AC=1503;AN=2184 GT:DS:GL:BD 0.68818682 1
1 78019608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0231;AVGPOST=0.9994;RSQ=0.9897;ERATE=0.0003;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78019672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.965;LDAF=0.6680;AVGPOST=0.9602;RSQ=0.9408;ERATE=0.0166;THETA=0.0004;AC=1464;AN=2184 GT:DS:GL:BD 0.67032969 1
1 78019673 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.964;LDAF=0.6923;AVGPOST=0.9853;RSQ=0.9765;ERATE=0.0009;THETA=0.0010;AC=1518;AN=2184 GT:DS:GL:BD 0.69505495 1
1 78019783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6384;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78019854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0200;AVGPOST=0.9982;RSQ=0.9634;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78019885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8660;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78019922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0124;AVGPOST=0.9989;RSQ=0.9647;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78019996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78020081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78020217 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78020225 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7175;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78020282 . G GTTTTGT 1113 PASS INDEL;BAVGPOST=0.993;BRSQ=0.792;LDAF=0.0170;AVGPOST=0.9927;RSQ=0.8412;ERATE=0.0008;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78020314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.5687;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78020343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.653;LDAF=0.0095;AVGPOST=0.9904;RSQ=0.5674;ERATE=0.0017;THETA=0.0017;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78020347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.704;LDAF=0.0044;AVGPOST=0.9957;RSQ=0.6247;ERATE=0.0010;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78020539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0245;AVGPOST=0.9973;RSQ=0.9587;ERATE=0.0004;THETA=0.0014;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78020591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0038;AVGPOST=0.9941;RSQ=0.3654;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78020592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5925;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78020656 . AT A 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0029;AVGPOST=0.9967;RSQ=0.5277;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78020855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.947;LDAF=0.0271;AVGPOST=0.9978;RSQ=0.9711;ERATE=0.0004;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78020856 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4053;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78020957 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78021155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78021195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7902;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78021197 . CACTT C 541 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8197;ERATE=0.0004;THETA=0.0067;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78021227 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0148;AVGPOST=0.9976;RSQ=0.9361;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78021323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78021350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8839;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78021412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5961;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78021450 . T TAAC 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5565;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78021512 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8636;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78021526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9179;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78021679 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6955;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0008;AC=1519;AN=2184 GT:DS:GL:BD 0.69551283 1
1 78021704 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78021803 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78021860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78021916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78022001 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78022008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0005;THETA=0.0034;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78022024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78022212 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78022217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6467;AVGPOST=0.9947;RSQ=0.9921;ERATE=0.0008;THETA=0.0004;AC=1412;AN=2184 GT:DS:GL:BD 0.64652014 1
1 78022256 . GACAA G 573 PASS INDEL;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0084;AVGPOST=0.9950;RSQ=0.7744;ERATE=0.0006;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78022271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78022446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6877;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78022539 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7457;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78022621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8180;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78022721 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.7023;AVGPOST=0.9971;RSQ=0.9945;ERATE=0.0007;THETA=0.0002;AC=1533;AN=2184 GT:DS:GL:BD 0.70192307 1
1 78022831 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78022851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6664;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0011;THETA=0.0004;AC=1455;AN=2184 GT:DS:GL:BD 0.66620880 1
1 78022878 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0577;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 78022913 . A AT 1873 PASS INDEL;BAVGPOST=0.985;BRSQ=0.837;LDAF=0.0452;AVGPOST=0.9699;RSQ=0.7469;ERATE=0.0067;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 78022923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78022929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8579;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78023052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8279;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78023082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78023108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78023113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78023173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2595;AVGPOST=0.9946;RSQ=0.9900;ERATE=0.0004;THETA=0.0004;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 78023217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9465;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78023287 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78023303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78023374 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78023426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5334;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78023433 . CT C 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6561;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78023720 rs112286280 T TTTAAG 1783 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0183;AVGPOST=0.9989;RSQ=0.9713;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78023737 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9455;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78023753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.6853;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0006;THETA=0.0004;AC=1495;AN=2184 GT:DS:GL:BD 0.68452382 1
1 78023854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0049;AVGPOST=0.9985;RSQ=0.8882;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78024007 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8783;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78024037 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7616;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78024210 . G GTGA 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5736;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78024284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7191;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0008;AC=1570;AN=2184 GT:DS:GL:BD 0.71886444 1
1 78024313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78024345 rs79671213 C CTAT 104052 PASS INDEL;BAVGPOST=0.980;BRSQ=0.974;LDAF=0.6553;AVGPOST=0.9868;RSQ=0.9812;ERATE=0.0018;THETA=0.0004;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 78024348 rs72506825 T TTA 41675 PASS INDEL;BAVGPOST=0.945;BRSQ=0.901;LDAF=0.5809;AVGPOST=0.9239;RSQ=0.8814;ERATE=0.0154;THETA=0.0004;AC=1296;AN=2184 GT:DS:GL:BD 0.59340662 1
1 78024349 rs72506825 T TA 16041 PASS INDEL;BAVGPOST=0.924;BRSQ=0.858;LDAF=0.5237;AVGPOST=0.8839;RSQ=0.8156;ERATE=0.0288;THETA=0.0012;AC=1200;AN=2184 GT:DS:GL:BD 0.54945058 1
1 78024368 . ATGTT A 1530 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9995;RSQ=0.9801;ERATE=0.0003;THETA=0.0056;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78024381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78024487 . C CTGTT 967 PASS INDEL;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0058;AVGPOST=0.9991;RSQ=0.9326;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78024566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78024602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7228;AVGPOST=0.9971;RSQ=0.9946;ERATE=0.0021;THETA=0.0028;AC=1579;AN=2184 GT:DS:GL:BD 0.72298533 1
1 78024656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78024659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9184;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78024660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.6372;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78024743 rs112935115 C CCAGT 1393 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0055;AVGPOST=0.9985;RSQ=0.8867;ERATE=0.0010;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78024764 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78024777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78024795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78024809 rs112287024 G GCAT 1830 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0174;AVGPOST=0.9989;RSQ=0.9689;ERATE=0.0005;THETA=0.0038;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78024822 . G GTGTC 985 PASS INDEL;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8551;ERATE=0.0008;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78024877 . G GTTGA 592 PASS INDEL;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7081;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78024966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0232;AVGPOST=0.9992;RSQ=0.9860;ERATE=0.0004;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78025020 . T TA 191 PASS INDEL;BAVGPOST=0.995;BRSQ=0.874;LDAF=0.0231;AVGPOST=0.9977;RSQ=0.9598;ERATE=0.0004;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78025047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.7219;AVGPOST=0.9945;RSQ=0.9890;ERATE=0.0007;THETA=0.0004;AC=1577;AN=2184 GT:DS:GL:BD 0.72206962 1
1 78025049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.7225;AVGPOST=0.9954;RSQ=0.9915;ERATE=0.0004;THETA=0.0005;AC=1576;AN=2184 GT:DS:GL:BD 0.72161174 1
1 78025120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78025175 . T TTTCA 117 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8509;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78025199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9277;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78025230 rs3835545 GTATT G 82061 PASS INDEL;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.6690;AVGPOST=0.9846;RSQ=0.9753;ERATE=0.0028;THETA=0.0005;AC=1470;AN=2184 GT:DS:GL:BD 0.67307693 1
1 78025285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78025307 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0066;AVGPOST=0.9977;RSQ=0.8616;ERATE=0.0003;THETA=0.0037;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78025318 . G GTGTT 85 PASS INDEL;BAVGPOST=0.990;BRSQ=0.248;LDAF=0.0310;AVGPOST=0.9634;RSQ=0.5549;ERATE=0.0017;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78025320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0119;AVGPOST=0.9963;RSQ=0.8806;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78025435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78025439 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.7978;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78025441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78025454 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7253;AVGPOST=0.9971;RSQ=0.9937;ERATE=0.0007;THETA=0.0004;AC=1585;AN=2184 GT:DS:GL:BD 0.72573262 1
1 78025459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.2185;AVGPOST=0.9918;RSQ=0.9845;ERATE=0.0003;THETA=0.0037;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 78025470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0229;AVGPOST=0.9997;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78025551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6748;AVGPOST=0.9963;RSQ=0.9944;ERATE=0.0004;THETA=0.0003;AC=1473;AN=2184 GT:DS:GL:BD 0.67445058 1
1 78025564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7489;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78025597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6590;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78025729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78025844 . CTG C 258 PASS INDEL;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4446;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78025860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0229;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78025872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78025936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8067;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78025963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7237;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78026022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9540;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78026114 . CTT C 56 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6226;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78026369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8313;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78026443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78026604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6552;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78026656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0184;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78026667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8407;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78026900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78027083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0226;AVGPOST=0.9991;RSQ=0.9816;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78027084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9085;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78027084 . G GA 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6733;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78027282 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5372;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78027322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3958;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78027326 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0045;AVGPOST=0.9975;RSQ=0.7709;ERATE=0.0010;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78027331 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6939;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78027350 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78027483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6190;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78027725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6905;AVGPOST=0.9982;RSQ=0.9964;ERATE=0.0005;THETA=0.0006;AC=1508;AN=2184 GT:DS:GL:BD 0.69047618 1
1 78027822 . T TAG 148 PASS INDEL;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7390;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78027839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4853;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78027885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0100;AVGPOST=0.9985;RSQ=0.9413;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78028118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9530;ERATE=0.0003;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78028234 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8370;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78028366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78028488 rs71588899 CACTCCTA C 3022 PASS INDEL;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0104;AVGPOST=0.9989;RSQ=0.9593;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78028504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9842;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78028763 . T TA 164 PASS INDEL;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5085;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78028857 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9020;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78028883 . GATCTT G 3934 PASS INDEL;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0201;AVGPOST=0.9962;RSQ=0.9269;ERATE=0.0004;THETA=0.0015;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78028992 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7573;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78029017 . A AT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5624;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78029102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7067;AVGPOST=0.9972;RSQ=0.9942;ERATE=0.0007;THETA=0.0003;AC=1544;AN=2184 GT:DS:GL:BD 0.70695972 1
1 78029152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0040;AVGPOST=0.9959;RSQ=0.6122;ERATE=0.0006;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78029167 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8257;ERATE=0.0004;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78029248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78029365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6929;AVGPOST=0.9967;RSQ=0.9937;ERATE=0.0007;THETA=0.0003;AC=1514;AN=2184 GT:DS:GL:BD 0.69322342 1
1 78029437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6689;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78029442 . GA G 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.5220;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78029504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7919;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78029649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78029796 . AG A 412 PASS INDEL;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0082;AVGPOST=0.9974;RSQ=0.8673;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78029905 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6962;AVGPOST=0.9971;RSQ=0.9941;ERATE=0.0007;THETA=0.0002;AC=1520;AN=2184 GT:DS:GL:BD 0.69597071 1
1 78029937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6047;ERATE=0.0007;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78029985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0031;AVGPOST=0.9976;RSQ=0.7079;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78030000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5972;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78030054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78030330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78030417 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78030482 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0029;AVGPOST=0.9974;RSQ=0.6741;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78030998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78031287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78031302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78031433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78031521 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78031539 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78031599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78031615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78031628 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78031690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0567;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 78031706 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9662;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78031851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78031912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78031994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6099;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=1332;AN=2184 GT:DS:GL:BD 0.60989010 1
1 78032185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0724;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 78032437 . TA T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4507;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78032542 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5090;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78032742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8944;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78032783 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7917;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78032867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78032880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78032896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78032910 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78033030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7854;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78033048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78033065 . TGA T 145 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8025;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78033117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7363;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78033398 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78033407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78033534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.9035;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78033612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2798;AVGPOST=0.9938;RSQ=0.9882;ERATE=0.0006;THETA=0.0004;AC=610;AN=2184 GT:DS:GL:BD 0.27930403 0
1 78033981 rs10568325 AAAATG A 71512 PASS INDEL;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.6007;AVGPOST=0.9711;RSQ=0.9572;ERATE=0.0066;THETA=0.0004;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 78033999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78034007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78034049 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0040;AVGPOST=0.9997;RSQ=0.9757;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78034075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78034296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0075;AVGPOST=0.9994;RSQ=0.9666;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78034516 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78034643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78034694 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78034788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6361;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78034797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0021;AVGPOST=0.9969;RSQ=0.3864;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78034853 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6322;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78034877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8593;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78034967 . AGCCAAGACTGT A 1438 PASS INDEL;BAVGPOST=0.989;BRSQ=0.554;LDAF=0.0122;AVGPOST=0.9910;RSQ=0.7364;ERATE=0.0005;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78035017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5158;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78035068 . T TA 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0024;AVGPOST=0.9960;RSQ=0.3600;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78035163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6962;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=1521;AN=2184 GT:DS:GL:BD 0.69642860 1
1 78035225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9996;RSQ=0.9674;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78035439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0173;AVGPOST=0.9994;RSQ=0.9867;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78035589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.957;LDAF=0.0891;AVGPOST=0.9915;RSQ=0.9632;ERATE=0.0006;THETA=0.0007;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 78035616 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0040;AVGPOST=0.9986;RSQ=0.8568;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78035634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6887;AVGPOST=0.9981;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=1504;AN=2184 GT:DS:GL:BD 0.68864471 1
1 78035653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3684;ERATE=0.0004;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78035856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.975;LDAF=0.6817;AVGPOST=0.9627;RSQ=0.9360;ERATE=0.0065;THETA=0.0003;AC=1507;AN=2184 GT:DS:GL:BD 0.69001830 1
1 78035857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8168;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78035907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6173;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78035988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.806;LDAF=0.0161;AVGPOST=0.9954;RSQ=0.8786;ERATE=0.0005;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78036015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9957;RSQ=0.7197;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78036292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.764;LDAF=0.0081;AVGPOST=0.9960;RSQ=0.8101;ERATE=0.0008;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78036314 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78036328 . TTTA T 574 PASS INDEL;BAVGPOST=0.996;BRSQ=0.642;LDAF=0.0074;AVGPOST=0.9959;RSQ=0.7858;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78036366 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.980;LDAF=0.5991;AVGPOST=0.9679;RSQ=0.9550;ERATE=0.0055;THETA=0.0004;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 78036370 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0032;AVGPOST=0.9957;RSQ=0.5212;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78036411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78036487 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0029;AVGPOST=0.9964;RSQ=0.5838;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78036657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.4708;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78036688 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.6065;AVGPOST=0.9961;RSQ=0.9942;ERATE=0.0005;THETA=0.0004;AC=1326;AN=2184 GT:DS:GL:BD 0.60714287 1
1 78036701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5141;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78036773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5123;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78036970 . AAAAT A 326 PASS INDEL;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0041;AVGPOST=0.9946;RSQ=0.4574;ERATE=0.0013;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78036974 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.7066;AVGPOST=0.9908;RSQ=0.9822;ERATE=0.0032;THETA=0.0003;AC=1547;AN=2184 GT:DS:GL:BD 0.70833331 1
1 78037029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0185;AVGPOST=0.9988;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78037114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.8977;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78037184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9562;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78037295 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78037302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78037341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8543;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78037358 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9432;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78037562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.6318;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78037735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0089;AVGPOST=0.9975;RSQ=0.8939;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78037743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5977;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78037917 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5903;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78037996 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6881;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78038047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.582;LDAF=0.0082;AVGPOST=0.9911;RSQ=0.5736;ERATE=0.0024;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78038087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.721;LDAF=0.0065;AVGPOST=0.9938;RSQ=0.6057;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78038093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0037;AVGPOST=0.9946;RSQ=0.4297;ERATE=0.0011;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78038150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0124;AVGPOST=0.9985;RSQ=0.9448;ERATE=0.0004;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78038227 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8107;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78038274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4707;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78038305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5980;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78038496 . TTC T 656 PASS INDEL;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9554;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78038609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6233;AVGPOST=0.9970;RSQ=0.9950;ERATE=0.0008;THETA=0.0011;AC=1363;AN=2184 GT:DS:GL:BD 0.62408423 1
1 78038679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9990;RSQ=0.9145;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78038737 . A ACT 5954 PASS INDEL;BAVGPOST=0.994;BRSQ=0.898;LDAF=0.0292;AVGPOST=0.9936;RSQ=0.9177;ERATE=0.0005;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78038756 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8491;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78038845 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3945;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78038857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5110;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78038898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6029;AVGPOST=0.9899;RSQ=0.9854;ERATE=0.0010;THETA=0.0004;AC=1321;AN=2184 GT:DS:GL:BD 0.60485345 1
1 78039087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0052;AVGPOST=0.9961;RSQ=0.6850;ERATE=0.0007;THETA=0.0026;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78039103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78039216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0738;AVGPOST=0.9984;RSQ=0.9908;ERATE=0.0003;THETA=0.0004;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 78039309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8745;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78039371 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9339;ERATE=0.0006;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78039737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6071;AVGPOST=0.9942;RSQ=0.9924;ERATE=0.0004;THETA=0.0006;AC=1323;AN=2184 GT:DS:GL:BD 0.60576922 1
1 78039872 . TATATC T 184 PASS INDEL;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0032;AVGPOST=0.9958;RSQ=0.4709;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78040216 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8877;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78040266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8938;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78040287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0194;AVGPOST=0.9982;RSQ=0.9724;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78040477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6736;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78040496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.908;LDAF=0.0082;AVGPOST=0.9968;RSQ=0.8767;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78040509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.546;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8441;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78040696 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6409;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78040697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9959;RSQ=0.8240;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78040698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.579;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4769;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78040830 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8962;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78040894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8706;ERATE=0.0007;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78040895 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0040;AVGPOST=0.9980;RSQ=0.8390;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78041039 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6435;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78041288 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78041345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78041513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8780;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78041519 . AG A 157 PASS INDEL;BAVGPOST=0.998;BRSQ=0.716;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6992;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78041521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9728;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78041720 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78041762 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78041885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78042090 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7487;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78042122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2819;AVGPOST=0.9954;RSQ=0.9902;ERATE=0.0020;THETA=0.0006;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 78042391 . C CG 188 PASS INDEL;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7683;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78042400 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78042437 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.776;LDAF=0.9567;AVGPOST=0.9724;RSQ=0.7356;ERATE=0.0043;THETA=0.0002;AC=2109;AN=2184 GT:DS:GL:BD 0.96565932 1
1 78042451 . AAACAAAAAAAC A 66416 PASS INDEL;BAVGPOST=0.977;BRSQ=0.962;LDAF=0.5872;AVGPOST=0.9500;RSQ=0.9282;ERATE=0.0110;THETA=0.0003;AC=1293;AN=2184 GT:DS:GL:BD 0.59203297 1
1 78042523 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6058;AVGPOST=0.9964;RSQ=0.9944;ERATE=0.0004;THETA=0.0003;AC=1323;AN=2184 GT:DS:GL:BD 0.60576922 1
1 78042552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78042574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78042703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78042787 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9225;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78042920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78042988 . T TA 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6280;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78043136 . A AC 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6318;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78043150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0233;AVGPOST=0.9992;RSQ=0.9854;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78043172 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8749;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78043418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78043464 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7360;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78043595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0033;AVGPOST=0.9961;RSQ=0.5893;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78043619 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5335;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78043808 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5958;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78043864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78043884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9267;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78044053 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0115;AVGPOST=0.9987;RSQ=0.9600;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78044196 . CCTTT C 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0039;AVGPOST=0.9957;RSQ=0.5611;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78044265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78044429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78044433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78044628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9499;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78045067 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0120;AVGPOST=0.9969;RSQ=0.9024;ERATE=0.0010;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78045069 . A AT 50 PASS INDEL;BAVGPOST=0.997;BRSQ=0.458;LDAF=0.0110;AVGPOST=0.9878;RSQ=0.5877;ERATE=0.0017;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78045170 . A AC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78045172 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78045193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78045206 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78045257 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78045291 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78045321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78045369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6881;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0009;AC=1503;AN=2184 GT:DS:GL:BD 0.68818682 1
1 78045409 . AAT A 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6973;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78045453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9990;RSQ=0.9687;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78045510 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78045589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.7998;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78045659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.776;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8950;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78045757 . C CT 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78045897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6823;AVGPOST=0.9978;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=1489;AN=2184 GT:DS:GL:BD 0.68177658 1
1 78046051 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6318;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78046053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8121;ERATE=0.0011;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78046138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7079;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78046155 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78046199 . AT A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6592;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78046265 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8825;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78046269 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78046354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78046466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78046487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78046496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0238;AVGPOST=0.9992;RSQ=0.9877;ERATE=0.0003;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78046630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0526;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 78046721 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78046760 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78046798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78046891 . CT C 123 PASS INDEL;BAVGPOST=0.989;BRSQ=0.564;LDAF=0.0218;AVGPOST=0.9713;RSQ=0.4886;ERATE=0.0060;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78046946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78047041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78047197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78047216 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7703;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78047237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78047503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78047508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78047529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78047628 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0727;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0004;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 78048032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0248;AVGPOST=0.9982;RSQ=0.9707;ERATE=0.0004;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78048331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.2075;AVGPOST=0.9919;RSQ=0.9826;ERATE=0.0006;THETA=0.0003;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 78048359 rs59830879 T TC 82 PASS INDEL;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0042;AVGPOST=0.9949;RSQ=0.5695;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78048559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7472;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78048596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0055;AVGPOST=0.9985;RSQ=0.8964;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78048698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6049;AVGPOST=0.9941;RSQ=0.9909;ERATE=0.0006;THETA=0.0006;AC=1320;AN=2184 GT:DS:GL:BD 0.60439563 1
1 78048741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8784;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78048791 . C CA 8483 PASS INDEL;BAVGPOST=0.963;BRSQ=0.891;LDAF=0.1603;AVGPOST=0.9316;RSQ=0.8288;ERATE=0.0098;THETA=0.0008;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 78048826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8103;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78048875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78048880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8026;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78048905 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6059;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78048921 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0194;AVGPOST=0.9977;RSQ=0.9556;ERATE=0.0003;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78048943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9195;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78049111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78049258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0035;AVGPOST=0.9977;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78049297 . G GA 27 PASS INDEL;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0024;AVGPOST=0.9967;RSQ=0.4029;ERATE=0.0007;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78049363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0050;AVGPOST=0.9988;RSQ=0.8902;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78049408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0081;AVGPOST=0.9991;RSQ=0.9486;ERATE=0.0005;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78049475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5007;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78049517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4384;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78049592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7197;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78050074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78050095 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78050120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78050166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78050362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78050659 . AT A 113 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0048;AVGPOST=0.9957;RSQ=0.6930;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78050760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0032;AVGPOST=0.9968;RSQ=0.6014;ERATE=0.0010;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78050925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78051289 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78051378 . A AT 98 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.3989;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78051459 . CA C 653 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0054;AVGPOST=0.9959;RSQ=0.7257;ERATE=0.0006;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78051818 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8986;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78051970 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78052058 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9121;ERATE=0.0007;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78052228 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78052441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5503;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78052971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.918;LDAF=0.0777;AVGPOST=0.9900;RSQ=0.9469;ERATE=0.0013;THETA=0.0006;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 78052978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.796;LDAF=0.0167;AVGPOST=0.9935;RSQ=0.8439;ERATE=0.0007;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78052988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0705;AVGPOST=0.9957;RSQ=0.9757;ERATE=0.0003;THETA=0.0006;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 78053042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0542;AVGPOST=0.9957;RSQ=0.9669;ERATE=0.0004;THETA=0.0008;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 78053098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5839;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78053137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.4288;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78053191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.546;LDAF=0.0106;AVGPOST=0.9862;RSQ=0.4894;ERATE=0.0031;THETA=0.0078;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78053228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.944;LDAF=0.2055;AVGPOST=0.9831;RSQ=0.9637;ERATE=0.0006;THETA=0.0004;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 78053333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5245;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78053334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7338;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78053372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.3992;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78053397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8467;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78053437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0078;AVGPOST=0.9932;RSQ=0.6747;ERATE=0.0012;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78053457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5246;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78053528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7047;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78053542 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8819;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78053633 . AC A 430 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6643;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78053635 . ATCT A 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78053667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4420;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78053680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7918;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78053685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8269;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78053734 . GC G 85 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6515;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78053737 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78053740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78053811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4880;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78053877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0265;AVGPOST=0.9991;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78053878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78053893 . CA C 857 PASS INDEL;BAVGPOST=0.997;BRSQ=0.797;LDAF=0.0072;AVGPOST=0.9965;RSQ=0.8043;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78053894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78054114 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78054223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.948;LDAF=0.0290;AVGPOST=0.9959;RSQ=0.9526;ERATE=0.0003;THETA=0.0007;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 78054275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.790;LDAF=0.0080;AVGPOST=0.9964;RSQ=0.8728;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78054398 . C CA 2200 PASS INDEL;BAVGPOST=0.988;BRSQ=0.921;LDAF=0.0772;AVGPOST=0.9721;RSQ=0.8429;ERATE=0.0060;THETA=0.0033;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 78054408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8141;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78054523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6871;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78054639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0013;AVGPOST=0.9976;RSQ=0.2284;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78054828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0060;AVGPOST=0.9950;RSQ=0.6827;ERATE=0.0018;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78054898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0218;AVGPOST=0.9989;RSQ=0.9767;ERATE=0.0006;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78054921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0040;AVGPOST=0.9978;RSQ=0.7707;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78054996 . AT A 12 PASS INDEL;BAVGPOST=0.998;BRSQ=0.533;LDAF=0.0047;AVGPOST=0.9936;RSQ=0.4482;ERATE=0.0012;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78055054 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78055065 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7202;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78055132 . T TG 145 PASS INDEL;BAVGPOST=0.994;BRSQ=0.706;LDAF=0.0103;AVGPOST=0.9905;RSQ=0.6381;ERATE=0.0013;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78055187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78055234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6866;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78055317 . G GT 66 PASS INDEL;BAVGPOST=0.992;BRSQ=0.503;LDAF=0.0147;AVGPOST=0.9815;RSQ=0.4994;ERATE=0.0043;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78055403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0035;AVGPOST=0.9971;RSQ=0.7173;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78055439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6736;ERATE=0.0005;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78055491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0128;AVGPOST=0.9974;RSQ=0.9294;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78055566 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0071;AVGPOST=0.9993;RSQ=0.9595;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78055783 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5040;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78055887 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78055896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5548;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78056096 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7648;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78056180 . AGAG A 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0031;AVGPOST=0.9964;RSQ=0.4872;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78056383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8318;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78056433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9070;ERATE=0.0003;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78056496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5391;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78056497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6325;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78056538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78056590 . AG A 1674 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0122;AVGPOST=0.9986;RSQ=0.9467;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78056716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0166;AVGPOST=0.9986;RSQ=0.9608;ERATE=0.0004;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78056721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8345;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78056830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78056831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78056846 . TG T 13682 PASS INDEL;BAVGPOST=0.952;BRSQ=0.904;LDAF=0.6187;AVGPOST=0.9177;RSQ=0.8691;ERATE=0.0211;THETA=0.0008;AC=1377;AN=2184 GT:DS:GL:BD 0.63049453 1
1 78056847 rs67613957 GT G 71303 PASS INDEL;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.6592;AVGPOST=0.9828;RSQ=0.9710;ERATE=0.0032;THETA=0.0006;AC=1441;AN=2184 GT:DS:GL:BD 0.65979856 1
1 78057058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.8229;ERATE=0.0003;THETA=0.0019;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78057120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6328;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78057132 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9221;ERATE=0.0006;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78057184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78057262 . CA C 74 PASS INDEL;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7371;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78057291 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5764;AVGPOST=0.9974;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=1258;AN=2184 GT:DS:GL:BD 0.57600731 1
1 78057328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0741;AVGPOST=0.9988;RSQ=0.9931;ERATE=0.0004;THETA=0.0003;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 78057695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9005;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78057697 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0226;AVGPOST=0.9995;RSQ=0.9890;ERATE=0.0004;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78057750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9684;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78057933 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78058018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6751;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78058070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0272;AVGPOST=0.9966;RSQ=0.9449;ERATE=0.0004;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78058080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.6976;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78058081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.954;LDAF=0.0743;AVGPOST=0.9982;RSQ=0.9893;ERATE=0.0004;THETA=0.0005;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 78058082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0039;AVGPOST=0.9980;RSQ=0.7981;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78058104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7776;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78058130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.482;LDAF=0.0037;AVGPOST=0.9950;RSQ=0.4634;ERATE=0.0009;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78058193 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6538;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78058199 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0036;AVGPOST=0.9949;RSQ=0.4329;ERATE=0.0012;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78058239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7357;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78058257 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.767;LDAF=0.0083;AVGPOST=0.9937;RSQ=0.7059;ERATE=0.0005;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78058380 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78058385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0523;AVGPOST=0.9972;RSQ=0.9781;ERATE=0.0004;THETA=0.0006;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 78058494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7452;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78058538 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0805;AVGPOST=0.9982;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 78058659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.8241;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78058734 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0334;AVGPOST=0.9989;RSQ=0.9860;ERATE=0.0003;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 78058786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0221;AVGPOST=0.9995;RSQ=0.9905;ERATE=0.0003;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78058880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78058919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7638;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78058990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8472;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78059037 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.9952;AVGPOST=0.9979;RSQ=0.8371;ERATE=0.0004;THETA=0.0005;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 78059131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6322;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78059172 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0172;AVGPOST=0.9984;RSQ=0.9570;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78059362 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9989;RSQ=0.9060;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78059464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0081;AVGPOST=0.9977;RSQ=0.8813;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78059724 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7886;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78059733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5470;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78059784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0258;AVGPOST=0.9993;RSQ=0.9870;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78059878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0096;AVGPOST=0.9991;RSQ=0.9651;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78060096 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5769;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 78060278 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8210;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78060289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8825;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78060456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5771;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0005;THETA=0.0009;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 78060505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.939;LDAF=0.0253;AVGPOST=0.9941;RSQ=0.9193;ERATE=0.0004;THETA=0.0020;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78060572 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78060600 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.948;LDAF=0.0659;AVGPOST=0.9933;RSQ=0.9543;ERATE=0.0005;THETA=0.0006;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 78060637 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7651;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78060730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8869;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78060841 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7393;ERATE=0.0011;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78060863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78061170 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9565;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78061352 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8812;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78061375 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78061481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0050;AVGPOST=0.9951;RSQ=0.6808;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78061621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6026;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78061622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78061635 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.8233;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78061791 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6695;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78061828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6322;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78062033 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78062070 . AGC A 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5694;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78062387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9993;RSQ=0.9435;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78062425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0005;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78062426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78062476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78062657 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9103;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78062723 . C CCCTA 1196 PASS INDEL;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0072;AVGPOST=0.9979;RSQ=0.8892;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78062746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8566;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78062822 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78062945 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7096;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78062963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0042;AVGPOST=0.9960;RSQ=0.6570;ERATE=0.0010;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78063143 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0749;AVGPOST=0.9991;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 78063373 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9002;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78063518 rs113554274 AC A 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78063608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8569;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78063640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.9037;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78063661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0164;AVGPOST=0.9959;RSQ=0.9072;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78063815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7159;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78064045 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.6037;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78064139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0069;AVGPOST=0.9994;RSQ=0.9560;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78064233 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.855;LDAF=0.0091;AVGPOST=0.9982;RSQ=0.9130;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78064287 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0523;AVGPOST=0.9993;RSQ=0.9933;ERATE=0.0003;THETA=0.0005;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 78064289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5850;AVGPOST=0.9924;RSQ=0.9888;ERATE=0.0018;THETA=0.0006;AC=1279;AN=2184 GT:DS:GL:BD 0.58562273 1
1 78064290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4494;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78064382 . CA C 166 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7058;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78064466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.976;LDAF=0.0746;AVGPOST=0.9983;RSQ=0.9896;ERATE=0.0005;THETA=0.0003;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 78064489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8587;ERATE=0.0004;THETA=0.0017;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78064771 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78064920 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6399;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78064930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0044;AVGPOST=0.9968;RSQ=0.7199;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78065123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5903;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78065129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78065183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.8927;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78065367 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.7151;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78065423 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.758;LDAF=0.0040;AVGPOST=0.9973;RSQ=0.7185;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78065510 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5624;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78065518 . TAA T 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8256;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78065754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8314;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78065771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0231;AVGPOST=0.9994;RSQ=0.9895;ERATE=0.0003;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78065862 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78065981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5691;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78066008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9301;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78066093 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8795;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78066183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78066336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78066404 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78066441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0800;AVGPOST=0.9978;RSQ=0.9886;ERATE=0.0015;THETA=0.0046;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 78066573 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8614;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78066789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9206;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78066829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78066950 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78067000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9873;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78067029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78067036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78067242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78067527 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78067554 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78067584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6142;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78067615 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78067745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78067746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78067860 . CAA C 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78067871 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78068001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8254;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78068014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78068045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8261;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78068099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78068133 . TG T 103 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6765;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78068190 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0736;AVGPOST=0.9987;RSQ=0.9921;ERATE=0.0004;THETA=0.0004;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 78068446 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9148;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78068497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8382;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78068505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6678;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78068509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5817;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78068525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0062;AVGPOST=0.9968;RSQ=0.7865;ERATE=0.0010;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78068908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7144;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78068931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=0.9983;RSQ=0.9687;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78068948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0178;AVGPOST=0.9982;RSQ=0.9559;ERATE=0.0003;THETA=0.0001;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78069052 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78069263 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8020;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78069302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4325;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78069303 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5120;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78069372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5341;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78069449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8115;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78069460 . T TA 40 PASS INDEL;BAVGPOST=0.993;BRSQ=0.447;LDAF=0.0093;AVGPOST=0.9851;RSQ=0.3891;ERATE=0.0027;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78069516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0285;AVGPOST=0.9994;RSQ=0.9896;ERATE=0.0004;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78069567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78069773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78070124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8292;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78070155 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5903;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78070184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78070185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0029;AVGPOST=0.9966;RSQ=0.5882;ERATE=0.0004;THETA=0.0043;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78070201 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.6834;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78070276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0041;AVGPOST=0.9994;RSQ=0.9373;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78070458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2145;AVGPOST=0.9926;RSQ=0.9824;ERATE=0.0005;THETA=0.0005;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 78070611 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5819;AVGPOST=0.9884;RSQ=0.9830;ERATE=0.0017;THETA=0.0004;AC=1272;AN=2184 GT:DS:GL:BD 0.58241761 1
1 78070731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0022;AVGPOST=0.9998;RSQ=0.9604;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78070745 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8825;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78071015 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78071437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7427;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78071485 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0196;AVGPOST=0.9986;RSQ=0.9731;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78071542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5901;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78071677 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5747;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78071697 . T TG 393 PASS INDEL;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78071809 . AC A 85 PASS INDEL;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5164;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78071811 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8688;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78071821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4379;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78071899 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0195;AVGPOST=0.9982;RSQ=0.9636;ERATE=0.0004;THETA=0.0009;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78071919 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78072103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6335;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78072231 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4697;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78072744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78072757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6518;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78072812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78072815 . TTTAA T 259 PASS INDEL;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78072877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78072890 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.948;LDAF=0.0523;AVGPOST=0.9940;RSQ=0.9512;ERATE=0.0005;THETA=0.0008;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 78072891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0215;AVGPOST=0.9978;RSQ=0.9597;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78072904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78072907 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0081;AVGPOST=0.9978;RSQ=0.9008;ERATE=0.0011;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78072982 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0142;AVGPOST=0.9994;RSQ=0.9823;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78073080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78073131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7164;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78073157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9539;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78073230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78073705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0138;AVGPOST=0.9987;RSQ=0.9620;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78073773 . A AG 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78073818 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78073879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.848;LDAF=0.0061;AVGPOST=0.9966;RSQ=0.7806;ERATE=0.0005;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78074026 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78074048 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.6903;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78074123 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8679;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78074177 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7705;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78074357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0167;AVGPOST=0.9992;RSQ=0.9784;ERATE=0.0003;THETA=0.0109;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78074429 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78074583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78074662 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5779;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0006;THETA=0.0004;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 78074781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6245;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78074841 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78074965 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.881;LDAF=0.0117;AVGPOST=0.9954;RSQ=0.8519;ERATE=0.0011;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78074993 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78075002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6294;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0005;THETA=0.0002;AC=1374;AN=2184 GT:DS:GL:BD 0.62912089 1
1 78075043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0132;AVGPOST=0.9985;RSQ=0.9578;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78075103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8259;ERATE=0.0003;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78075165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6952;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78075183 . CAAAG C 1735 PASS INDEL;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0106;AVGPOST=0.9988;RSQ=0.9539;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78075256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78075268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78075274 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7469;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78075463 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9056;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78075479 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7766;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78075500 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5286;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78075542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78075684 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8361;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78075766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.6622;AVGPOST=0.9945;RSQ=0.9908;ERATE=0.0007;THETA=0.0005;AC=1446;AN=2184 GT:DS:GL:BD 0.66208792 1
1 78075787 . TA T 49 PASS INDEL;BAVGPOST=0.994;BRSQ=0.516;LDAF=0.0111;AVGPOST=0.9873;RSQ=0.5492;ERATE=0.0022;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78076079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0075;AVGPOST=0.9983;RSQ=0.9127;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78076117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78076461 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6771;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78076775 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5771;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78076936 rs67255145 C CAA 14034 PASS INDEL;BAVGPOST=0.966;BRSQ=0.939;LDAF=0.6019;AVGPOST=0.9307;RSQ=0.8941;ERATE=0.0092;THETA=0.0005;AC=1342;AN=2184 GT:DS:GL:BD 0.61446887 1
1 78077004 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78077094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0168;AVGPOST=0.9956;RSQ=0.8991;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78077133 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5417;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78077255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78077321 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78077436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9289;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78077450 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78077651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4895;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78077771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78078009 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8600;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78078252 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78078604 . TTAAG T 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6852;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78078646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5781;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0006;THETA=0.0005;AC=1261;AN=2184 GT:DS:GL:BD 0.57738096 1
1 78078755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9989;RSQ=0.9820;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78078857 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6881;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78079049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0137;AVGPOST=0.9970;RSQ=0.9097;ERATE=0.0010;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78079076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0057;AVGPOST=0.9953;RSQ=0.6939;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78079244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0036;AVGPOST=0.9987;RSQ=0.8399;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78079414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78079467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78079575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5627;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78079610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78079708 . CAATA C 4488 PASS INDEL;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0532;AVGPOST=0.9982;RSQ=0.9847;ERATE=0.0006;THETA=0.0005;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 78079778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8493;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78079790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0509;AVGPOST=0.9988;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78079864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78079981 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6168;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78080128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.9932;AVGPOST=0.9983;RSQ=0.8898;ERATE=0.0003;THETA=0.0002;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 78080250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78080275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2159;AVGPOST=0.9909;RSQ=0.9815;ERATE=0.0006;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 78080356 . TAA T 163 PASS INDEL;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4296;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78080362 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7062;AVGPOST=0.9955;RSQ=0.9913;ERATE=0.0008;THETA=0.0004;AC=1542;AN=2184 GT:DS:GL:BD 0.70604396 1
1 78080380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78080575 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78080632 . T TA 447 PASS INDEL;BAVGPOST=0.990;BRSQ=0.602;LDAF=0.0181;AVGPOST=0.9779;RSQ=0.4959;ERATE=0.0053;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78080732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5290;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78081051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78081244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78081273 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5993;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78081419 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0055;AVGPOST=0.9966;RSQ=0.7703;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78081431 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.6065;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78081489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0335;AVGPOST=0.9989;RSQ=0.9851;ERATE=0.0004;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 78081530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78081616 . CCA C 503 PASS INDEL;BAVGPOST=0.971;BRSQ=0.639;LDAF=0.0698;AVGPOST=0.9215;RSQ=0.5009;ERATE=0.0258;THETA=0.0004;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 78081838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6333;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78082056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.832;LDAF=0.0165;AVGPOST=0.9927;RSQ=0.8369;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78082066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78082219 . TCA T 128 PASS INDEL;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0036;AVGPOST=0.9975;RSQ=0.7379;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78082428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6158;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78082650 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0097;AVGPOST=0.9994;RSQ=0.9691;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78082786 . T TC 3118 PASS INDEL;BAVGPOST=0.981;BRSQ=0.843;LDAF=0.0360;AVGPOST=0.9880;RSQ=0.8744;ERATE=0.0004;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 78082915 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78082917 . GT G 462 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78082993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7921;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78083010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78083135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6272;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0005;THETA=0.0005;AC=1370;AN=2184 GT:DS:GL:BD 0.62728935 1
1 78083231 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78083336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78083448 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.902;LDAF=0.5390;AVGPOST=0.9118;RSQ=0.8720;ERATE=0.0221;THETA=0.0007;AC=1202;AN=2184 GT:DS:GL:BD 0.55036628 1
1 78083742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=0.9990;RSQ=0.9829;ERATE=0.0004;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78083771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.7780;AVGPOST=0.9965;RSQ=0.9915;ERATE=0.0005;THETA=0.0005;AC=1700;AN=2184 GT:DS:GL:BD 0.77838826 1
1 78083780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.4829;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78083857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5682;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78083918 rs10597366 C CT 576 PASS INDEL;BAVGPOST=0.507;BRSQ=0.139;LDAF=0.4203;AVGPOST=0.6314;RSQ=0.3419;ERATE=0.0344;THETA=0.0005;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 78083929 . T TC 817 PASS INDEL;BAVGPOST=0.987;BRSQ=0.857;LDAF=0.0450;AVGPOST=0.9864;RSQ=0.8879;ERATE=0.0005;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 78083930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.857;LDAF=0.0442;AVGPOST=0.9871;RSQ=0.8935;ERATE=0.0004;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 78084158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4437;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78084193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5774;AVGPOST=0.9970;RSQ=0.9957;ERATE=0.0005;THETA=0.0005;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 78084218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5526;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78084481 . C CT 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6036;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78084788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6398;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78084820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6976;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78084947 . C CA 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0031;AVGPOST=0.9962;RSQ=0.4998;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78084968 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0056;AVGPOST=0.9994;RSQ=0.9478;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78085000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7531;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78085077 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5142;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78085194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78085333 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0146;AVGPOST=0.9984;RSQ=0.9556;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78085439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0253;AVGPOST=0.9996;RSQ=0.9926;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78085519 . T TA 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.6315;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78085529 . CT C 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6017;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78085711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78085818 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78085838 . T TA 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78085954 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6280;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=1372;AN=2184 GT:DS:GL:BD 0.62820512 1
1 78085990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0127;AVGPOST=0.9965;RSQ=0.8932;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78085998 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.8358;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78086119 . GAA G 140 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.3932;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78086168 . AT A 18 PASS INDEL;BAVGPOST=0.992;BRSQ=0.536;LDAF=0.0218;AVGPOST=0.9733;RSQ=0.5428;ERATE=0.0043;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78086185 . A AT 249 PASS INDEL;BAVGPOST=0.996;BRSQ=0.726;LDAF=0.0085;AVGPOST=0.9927;RSQ=0.6497;ERATE=0.0024;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78086239 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7948;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78086339 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78086414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78086503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0196;AVGPOST=0.9991;RSQ=0.9845;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78086666 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78086718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.882;LDAF=0.0261;AVGPOST=0.9944;RSQ=0.9124;ERATE=0.0007;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78086719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78086816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4585;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78086844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5840;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78087023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0172;AVGPOST=0.9957;RSQ=0.9113;ERATE=0.0003;THETA=0.0024;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78087231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0118;AVGPOST=0.9978;RSQ=0.9262;ERATE=0.0005;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78087356 . GC G 2280 PASS INDEL;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0155;AVGPOST=0.9991;RSQ=0.9758;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78087523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8477;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78087628 . TTCCC T 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4517;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78087699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78087765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8665;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78087964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6231;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78087996 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5234;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78088105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5338;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78088370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8120;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78088532 . TA T 54 PASS INDEL;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0053;AVGPOST=0.9938;RSQ=0.5662;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78088700 rs112724339 GTAAC G 134 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7707;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78088730 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7386;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78088793 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78088848 . T TC 725 PASS INDEL;BAVGPOST=0.996;BRSQ=0.785;LDAF=0.0059;AVGPOST=0.9987;RSQ=0.9101;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78089049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78089240 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78089320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78089399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5758;AVGPOST=0.9976;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=1258;AN=2184 GT:DS:GL:BD 0.57600731 1
1 78089430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78089466 . TC T 49 PASS INDEL;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8053;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78089566 . G GA 2706 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0224;AVGPOST=0.9990;RSQ=0.9819;ERATE=0.0004;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78089580 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8464;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78089612 . C CA 92 PASS INDEL;BAVGPOST=0.992;BRSQ=0.548;LDAF=0.0209;AVGPOST=0.9729;RSQ=0.4808;ERATE=0.0060;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78089663 . ATACAT A 58 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4700;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78089667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0181;AVGPOST=0.9986;RSQ=0.9673;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 78089758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7014;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78089835 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=0.9989;RSQ=0.9811;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78089848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8819;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78089854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0195;AVGPOST=0.9980;RSQ=0.9557;ERATE=0.0004;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78089948 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78090032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5964;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78090128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78090150 . T TA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5528;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78090174 rs11424365 T TA 71295 PASS INDEL;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5760;AVGPOST=0.9958;RSQ=0.9938;ERATE=0.0006;THETA=0.0004;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 78090177 . A AG 7794 PASS INDEL;BAVGPOST=0.927;BRSQ=0.869;LDAF=0.4885;AVGPOST=0.9009;RSQ=0.8546;ERATE=0.0297;THETA=0.0003;AC=1103;AN=2184 GT:DS:GL:BD 0.50503665 1
1 78090220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7779;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78090260 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6159;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78090265 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9317;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78090860 . G GT 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4009;ERATE=0.0007;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78091245 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78091293 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7009;AVGPOST=0.9967;RSQ=0.9932;ERATE=0.0007;THETA=0.0005;AC=1532;AN=2184 GT:DS:GL:BD 0.70146519 1
1 78091464 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.613;LDAF=0.0052;AVGPOST=0.9956;RSQ=0.6794;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78091541 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78091560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78091846 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5803;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78091908 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9354;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78091943 . CCA C 1420 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0102;AVGPOST=0.9989;RSQ=0.9501;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78092114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.0889;AVGPOST=0.9966;RSQ=0.9820;ERATE=0.0006;THETA=0.0005;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 78092132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7071;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78092237 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78092259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7152;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78092383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7446;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78092432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7926;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78092479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2097;AVGPOST=0.9959;RSQ=0.9911;ERATE=0.0004;THETA=0.0004;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 78092505 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8237;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78092631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78092955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78093028 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78093233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4093;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78093413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9237;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78093517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9238;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78093527 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78093641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78093827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8632;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78094004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.6657;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78094137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=0.9990;RSQ=0.9845;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78094267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78094268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78094300 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5979;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78094304 . GA G 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6971;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78094505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78094638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78094677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0723;AVGPOST=0.9994;RSQ=0.9965;ERATE=0.0003;THETA=0.0012;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 78094691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6494;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78094734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78094755 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78094779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5766;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=1258;AN=2184 GT:DS:GL:BD 0.57600731 1
1 78094823 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6265;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=1368;AN=2184 GT:DS:GL:BD 0.62637365 1
1 78095047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78095074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78095083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8459;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78095124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4350;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78095342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7805;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78095407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9786;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78095488 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78095518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7085;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78095598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7026;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78095656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78095689 . GA G 1939 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0195;AVGPOST=0.9981;RSQ=0.9585;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78095824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9845;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78095825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0383;AVGPOST=0.9987;RSQ=0.9836;ERATE=0.0005;THETA=0.0007;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 78095832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78096002 . C CA 1711 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0330;AVGPOST=0.9973;RSQ=0.9662;ERATE=0.0003;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 78096138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0108;AVGPOST=0.9993;RSQ=0.9769;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78096154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7529;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78096243 . C CA 528 PASS INDEL;BAVGPOST=0.996;BRSQ=0.801;LDAF=0.0121;AVGPOST=0.9918;RSQ=0.7252;ERATE=0.0008;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78096597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8277;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78096621 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5463;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78096685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78096713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4734;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78096726 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8255;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78096778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78096819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78096820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0015;AVGPOST=0.9972;RSQ=0.3829;ERATE=0.0004;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78096831 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0370;AVGPOST=0.9990;RSQ=0.9872;ERATE=0.0004;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 78096866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6636;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78096975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0173;AVGPOST=0.9979;RSQ=0.9537;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78097165 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78097229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0059;AVGPOST=0.9986;RSQ=0.9130;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78097394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78097465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78097673 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78097735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78097803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78097819 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78098003 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0003;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78098050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78098149 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78098151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78098227 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78098305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78098403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78098409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0004;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78098432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78098469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78098699 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78098793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78098835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78099082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78099098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78099161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78099265 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78099515 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.8011;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78099574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78099627 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5341;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78099856 . AAAATAAAT A 294 PASS INDEL;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0085;AVGPOST=0.9934;RSQ=0.7234;ERATE=0.0006;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78099864 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.772;LDAF=0.9718;AVGPOST=0.9856;RSQ=0.8037;ERATE=0.0013;THETA=0.0008;AC=2130;AN=2184 GT:DS:GL:BD 0.97527474 1
1 78099899 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7679;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78099911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8122;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78099937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78100021 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78100128 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78100294 . CT C 250 PASS INDEL;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8744;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78100379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8226;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78100533 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0508;AVGPOST=0.9994;RSQ=0.9949;ERATE=0.0003;THETA=0.0007;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78100677 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78100784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9996;RSQ=0.9833;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78100948 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78101072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9969;RSQ=0.9295;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78101171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9474;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78101341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.6991;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78101366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0047;AVGPOST=0.9981;RSQ=0.8032;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78101463 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7803;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78101582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.5754;AVGPOST=0.9864;RSQ=0.9805;ERATE=0.0012;THETA=0.0005;AC=1257;AN=2184 GT:DS:GL:BD 0.57554942 1
1 78101584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.5754;AVGPOST=0.9909;RSQ=0.9865;ERATE=0.0005;THETA=0.0005;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 78101618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5250;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78101640 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78101685 . ATTAC A 731 PASS INDEL;BAVGPOST=0.995;BRSQ=0.740;LDAF=0.0122;AVGPOST=0.9926;RSQ=0.7688;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78101823 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0048;AVGPOST=0.9946;RSQ=0.5656;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78101826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5358;ERATE=0.0007;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78101835 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7896;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78101852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5420;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78102098 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78102196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78102230 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8221;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78102333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5775;AVGPOST=0.9929;RSQ=0.9895;ERATE=0.0008;THETA=0.0008;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 78102426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.5761;AVGPOST=0.9940;RSQ=0.9905;ERATE=0.0012;THETA=0.0004;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 78102530 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6605;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78102539 . TC T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5535;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78102609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0075;AVGPOST=0.9978;RSQ=0.8943;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78102815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78102974 . T TA 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0087;AVGPOST=0.9918;RSQ=0.6459;ERATE=0.0008;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78103096 . TA T 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5592;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78103130 . A AG 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78103306 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7403;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78103462 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9438;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78103479 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0279;AVGPOST=0.9991;RSQ=0.9861;ERATE=0.0003;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 78103599 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0054;AVGPOST=0.9996;RSQ=0.9678;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78103699 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78103741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78103744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6494;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78103824 . ACTCC A 112 PASS INDEL;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.6117;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78103953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78103991 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8376;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78104126 . T TA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5165;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78104153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78104290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.6004;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78104319 . TG T 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4003;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78104347 . AT A 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4216;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78104385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4867;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78104455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0136;AVGPOST=0.9977;RSQ=0.9412;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78104509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7703;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78104544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6279;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78104559 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0223;AVGPOST=0.9996;RSQ=0.9916;ERATE=0.0003;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78104841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0173;AVGPOST=0.9977;RSQ=0.9513;ERATE=0.0003;THETA=0.0001;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78104851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0170;AVGPOST=0.9991;RSQ=0.9784;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78104852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6277;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0004;THETA=0.0006;AC=1370;AN=2184 GT:DS:GL:BD 0.62728935 1
1 78104867 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7299;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78104923 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78105215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78105352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.695;LDAF=0.0059;AVGPOST=0.9971;RSQ=0.8187;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78105383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0076;AVGPOST=0.9960;RSQ=0.7906;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78105634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0119;AVGPOST=0.9963;RSQ=0.8970;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78105694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4868;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78105741 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0172;AVGPOST=0.9949;RSQ=0.8919;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78105745 . TAATC T 180 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78105881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0042;AVGPOST=0.9968;RSQ=0.6944;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78106059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.4736;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78106244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0041;AVGPOST=0.9964;RSQ=0.6455;ERATE=0.0016;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78106326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7192;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78106407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.922;LDAF=0.0248;AVGPOST=0.9976;RSQ=0.9598;ERATE=0.0004;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78106520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9012;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78106532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6618;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78106543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0278;AVGPOST=0.9991;RSQ=0.9867;ERATE=0.0003;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 78106583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6531;ERATE=0.0013;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78106652 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78106693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78106779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0061;AVGPOST=0.9990;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78106851 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7459;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78106865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1089;AVGPOST=0.9965;RSQ=0.9881;ERATE=0.0003;THETA=0.0006;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 78106904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78106982 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78107012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5749;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78107295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78107598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4555;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78107636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78107641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78107738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0055;AVGPOST=0.9976;RSQ=0.8320;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78107744 . T TA 70 PASS INDEL;BAVGPOST=0.996;BRSQ=0.501;LDAF=0.0082;AVGPOST=0.9894;RSQ=0.4805;ERATE=0.0019;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78107874 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.972;LDAF=0.0651;AVGPOST=0.9948;RSQ=0.9659;ERATE=0.0003;THETA=0.0004;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 78107881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78107910 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6048;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78107969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7434;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78108057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9981;RSQ=0.9445;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78108126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78108428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5317;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78108677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0100;AVGPOST=0.9984;RSQ=0.9390;ERATE=0.0003;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78108718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6213;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78108813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6265;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78108862 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6663;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78108876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5036;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78108997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78109027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0007;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78109175 . C CA 133 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5503;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78109435 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.828;LDAF=0.0060;AVGPOST=0.9985;RSQ=0.8877;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78109567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8990;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78109648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8640;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78109772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2439;AVGPOST=0.9810;RSQ=0.9582;ERATE=0.0032;THETA=0.0004;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 78109979 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0115;AVGPOST=0.9981;RSQ=0.9324;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78110161 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7010;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78110226 . A AG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5101;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78110233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6659;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78110627 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78110645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78110649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0108;AVGPOST=0.9993;RSQ=0.9772;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78110747 . G GA 104 PASS INDEL;BAVGPOST=0.972;BRSQ=0.551;LDAF=0.0523;AVGPOST=0.9384;RSQ=0.4984;ERATE=0.0154;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 78111031 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78111107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8531;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78111132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5922;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78111153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4233;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 78111200 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0074;AVGPOST=0.9986;RSQ=0.9363;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78111235 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7790;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78111242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.8917;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78111372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8748;ERATE=0.0003;THETA=0.0037;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78111383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78111424 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6607;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78111443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5934;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78111473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5924;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78111571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0025;AVGPOST=0.9966;RSQ=0.4264;ERATE=0.0008;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78111607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4334;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78111801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78111870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0258;AVGPOST=0.9986;RSQ=0.9765;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78111945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.5092;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78112062 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0106;AVGPOST=0.9979;RSQ=0.9242;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78112199 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78112459 . C CA 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6139;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78112570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0170;AVGPOST=0.9990;RSQ=0.9745;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78112655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5392;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78112731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78112783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7227;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78112839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9984;RSQ=0.9770;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78112851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6523;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78112954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0062;AVGPOST=0.9978;RSQ=0.8692;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78112977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0938;AVGPOST=0.9965;RSQ=0.9819;ERATE=0.0006;THETA=0.0004;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 78113058 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8845;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78113197 . C CT 58 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7219;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78113273 . AATAAT A 306 PASS INDEL;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0028;AVGPOST=0.9961;RSQ=0.4698;ERATE=0.0008;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78113382 . TCA T 226 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7700;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78113433 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78113510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78113573 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78113709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5567;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78113726 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7724;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78113742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78113775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78113793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5696;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78113868 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7475;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78114219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78114425 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78114430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78114507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78114568 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4212;AVGPOST=0.9972;RSQ=0.9959;ERATE=0.0006;THETA=0.0004;AC=920;AN=2184 GT:DS:GL:BD 0.42124543 0
1 78114694 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78114848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78114922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7111;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78114984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4233;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 78115343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0378;AVGPOST=0.9984;RSQ=0.9824;ERATE=0.0003;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 78115436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.799;LDAF=0.0134;AVGPOST=0.9949;RSQ=0.8503;ERATE=0.0008;THETA=0.0014;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78115535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5024;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78115570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5198;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78115607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78115608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6665;ERATE=0.0011;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78115698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78115726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0115;AVGPOST=0.9969;RSQ=0.9046;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78116333 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5064;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78116403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4235;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0005;THETA=0.0005;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 78116404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5132;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78116441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.7981;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78116446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78116537 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78116702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9147;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78116706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8315;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78116811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3728;AVGPOST=0.9961;RSQ=0.9934;ERATE=0.0007;THETA=0.0005;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 78116831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78117037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6021;ERATE=0.0013;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78117072 . T TA 42 PASS INDEL;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5853;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78117162 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78117264 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78117298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78117445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0061;AVGPOST=0.9970;RSQ=0.8201;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78117483 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0129;AVGPOST=0.9989;RSQ=0.9659;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78117499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5864;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78117658 . AC A 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7974;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78117767 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0522;AVGPOST=0.9968;RSQ=0.9751;ERATE=0.0008;THETA=0.0003;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 78117876 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8559;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78117888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78118056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0120;AVGPOST=0.9993;RSQ=0.9731;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78118129 . CAT C 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78118158 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78118369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0226;AVGPOST=0.9996;RSQ=0.9917;ERATE=0.0003;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78118625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78118699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9860;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78118775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8276;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78118823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78118922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78119013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9954;AVGPOST=0.9995;RSQ=0.9577;ERATE=0.0003;THETA=0.0003;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 78119147 . T TA 406 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8663;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78119177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3745;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78119229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0108;AVGPOST=0.9972;RSQ=0.8984;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78119307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.4212;AVGPOST=0.9946;RSQ=0.9914;ERATE=0.0008;THETA=0.0003;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 78119339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.875;LDAF=0.1151;AVGPOST=0.9780;RSQ=0.9291;ERATE=0.0005;THETA=0.0004;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 78119382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0258;AVGPOST=0.9979;RSQ=0.9631;ERATE=0.0005;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78119425 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8353;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78119645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.571;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78119703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0245;AVGPOST=0.9972;RSQ=0.9441;ERATE=0.0009;THETA=0.0006;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78119815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0095;AVGPOST=0.9890;RSQ=0.5816;ERATE=0.0006;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78119896 . G GTC 53 PASS INDEL;BAVGPOST=0.997;BRSQ=0.701;LDAF=0.0118;AVGPOST=0.9852;RSQ=0.4967;ERATE=0.0025;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78120049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9071;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78120181 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4226;AVGPOST=0.9912;RSQ=0.9863;ERATE=0.0016;THETA=0.0007;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 78120355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78120569 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78120702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78120774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0124;AVGPOST=0.9990;RSQ=0.9705;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78121062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7544;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78121100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0063;AVGPOST=0.9975;RSQ=0.8280;ERATE=0.0011;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78121174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78121175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7331;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78121194 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7113;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78121252 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78121469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6518;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78122236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4938;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78122320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0085;AVGPOST=0.9984;RSQ=0.9263;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78122379 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8868;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78122409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4548;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78122501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2956;AVGPOST=0.9981;RSQ=0.9959;ERATE=0.0005;THETA=0.0003;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 78122686 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3729;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 78122705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78122743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0134;AVGPOST=0.9975;RSQ=0.9314;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78122785 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3715;AVGPOST=0.9946;RSQ=0.9901;ERATE=0.0012;THETA=0.0002;AC=810;AN=2184 GT:DS:GL:BD 0.37087911 0
1 78122987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0120;AVGPOST=0.9968;RSQ=0.9001;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78123000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0260;AVGPOST=0.9991;RSQ=0.9848;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78123143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8548;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78123382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78123540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9373;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78123804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0065;AVGPOST=0.9971;RSQ=0.8119;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78124068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.851;LDAF=0.0089;AVGPOST=0.9982;RSQ=0.9167;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78124129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4818;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78124210 . TTTTC T 5641 PASS INDEL;BAVGPOST=0.926;BRSQ=0.748;LDAF=0.1787;AVGPOST=0.8799;RSQ=0.6884;ERATE=0.0165;THETA=0.0008;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 78124211 . TTTC T 14672 PASS INDEL;BAVGPOST=0.953;BRSQ=0.889;LDAF=0.2105;AVGPOST=0.9434;RSQ=0.8913;ERATE=0.0043;THETA=0.0004;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 78124241 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8910;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78124282 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.682;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6918;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78124340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5918;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78124412 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78124595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78124760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.4526;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78124794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7070;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78124877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6938;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78125002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0056;AVGPOST=0.9982;RSQ=0.8536;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78125370 . C CA 621 PASS INDEL;BAVGPOST=0.852;BRSQ=0.305;LDAF=0.2177;AVGPOST=0.7262;RSQ=0.3099;ERATE=0.0532;THETA=0.0006;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 78125419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6299;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78125419 . G GT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78125503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78125509 . T TTTTG 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0025;AVGPOST=0.9959;RSQ=0.4227;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78125555 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0775;AVGPOST=0.9973;RSQ=0.9863;ERATE=0.0005;THETA=0.0005;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 78125660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0248;AVGPOST=0.9983;RSQ=0.9700;ERATE=0.0004;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78125700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78125856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0134;AVGPOST=0.9981;RSQ=0.9554;ERATE=0.0004;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78125890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7406;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78125892 . A AT 83 PASS INDEL;BAVGPOST=0.991;BRSQ=0.507;LDAF=0.0152;AVGPOST=0.9790;RSQ=0.4303;ERATE=0.0055;THETA=0.0027;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78126043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7017;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78126044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4228;AVGPOST=0.9974;RSQ=0.9961;ERATE=0.0005;THETA=0.0003;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 78126198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78126304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7022;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78126332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78126412 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0063;AVGPOST=0.9991;RSQ=0.9479;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78126557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8125;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78126763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9268;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78126882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.4159;AVGPOST=0.9821;RSQ=0.9733;ERATE=0.0025;THETA=0.0004;AC=917;AN=2184 GT:DS:GL:BD 0.41987181 0
1 78127031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5192;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78127093 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0255;AVGPOST=0.9991;RSQ=0.9839;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78127109 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0141;AVGPOST=0.9979;RSQ=0.9328;ERATE=0.0015;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78127130 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7267;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78127384 . G GA 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4738;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78127418 . TTTC T 176 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5048;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78127534 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8513;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78127544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.6285;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78127554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2272;AVGPOST=0.9955;RSQ=0.9891;ERATE=0.0008;THETA=0.0005;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 78127776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6941;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78127833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78127855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78127859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78128000 . C CT 84 PASS INDEL;BAVGPOST=0.984;BRSQ=0.527;LDAF=0.0349;AVGPOST=0.9513;RSQ=0.4216;ERATE=0.0111;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78128099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5392;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78128119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0045;AVGPOST=0.9998;RSQ=0.9824;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78128333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.5949;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78128619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.3770;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78128694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78128707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.549;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.4433;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78128789 . C CA 156 PASS INDEL;BAVGPOST=0.969;BRSQ=0.466;LDAF=0.0605;AVGPOST=0.9223;RSQ=0.4410;ERATE=0.0149;THETA=0.0013;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 78128821 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78128956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.8004;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78129039 . T TG 158 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7735;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78129199 . CTCT C 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78129510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.6076;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78129582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4866;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78129591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0032;AVGPOST=0.9960;RSQ=0.5251;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78129593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0293;AVGPOST=0.9956;RSQ=0.9351;ERATE=0.0007;THETA=0.0007;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78129781 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9853;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78130180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78130243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.7269;AVGPOST=0.9924;RSQ=0.9835;ERATE=0.0006;THETA=0.0004;AC=1588;AN=2184 GT:DS:GL:BD 0.72710621 1
1 78130397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.868;LDAF=0.0078;AVGPOST=0.9982;RSQ=0.9180;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78130492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9465;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78130773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0114;AVGPOST=0.9970;RSQ=0.8922;ERATE=0.0007;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78130918 . TACAG T 133 PASS INDEL;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78130992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78131134 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7524;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78131190 . A AG 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7300;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78131376 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6464;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78131494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6074;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78131504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.632;LDAF=0.0121;AVGPOST=0.9904;RSQ=0.7109;ERATE=0.0006;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78131626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.785;LDAF=0.0062;AVGPOST=0.9973;RSQ=0.8255;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78131641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.671;LDAF=0.0069;AVGPOST=0.9918;RSQ=0.5310;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78131814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0189;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78132260 . T TG 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78132490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6209;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78132534 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2955;AVGPOST=0.9941;RSQ=0.9890;ERATE=0.0009;THETA=0.0003;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 78132580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7765;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78132673 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78132708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8597;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78132979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0289;AVGPOST=0.9987;RSQ=0.9810;ERATE=0.0003;THETA=0.0007;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 78133030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78133080 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4231;AVGPOST=0.9972;RSQ=0.9955;ERATE=0.0008;THETA=0.0006;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 78133348 . T TC 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4813;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78133399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78133433 . AG A 148 PASS INDEL;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0031;AVGPOST=0.9969;RSQ=0.6231;ERATE=0.0007;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78133453 . T TC 402 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0131;AVGPOST=0.9992;RSQ=0.9745;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78133454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0141;AVGPOST=0.9976;RSQ=0.9366;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78133696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0031;AVGPOST=0.9971;RSQ=0.5840;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78133739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0103;AVGPOST=0.9982;RSQ=0.9303;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78133763 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6158;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78133769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78133830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78133881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0256;AVGPOST=0.9988;RSQ=0.9792;ERATE=0.0004;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78133970 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78134003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78134107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8718;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78134179 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0107;AVGPOST=0.9989;RSQ=0.9583;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78134307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.790;LDAF=0.0043;AVGPOST=0.9970;RSQ=0.7061;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78134496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78134696 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6823;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78134934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.1775;AVGPOST=0.9940;RSQ=0.9857;ERATE=0.0004;THETA=0.0004;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 78134935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4241;AVGPOST=0.9975;RSQ=0.9963;ERATE=0.0007;THETA=0.0003;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 78134939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4524;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78134991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7199;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78135052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5384;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78135124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8669;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78135145 . T TTC 1817 PASS INDEL;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0230;AVGPOST=0.9985;RSQ=0.9693;ERATE=0.0005;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78135186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4467;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78135380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0936;AVGPOST=0.9911;RSQ=0.9604;ERATE=0.0006;THETA=0.0003;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 78135439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.5141;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78135449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6146;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78135634 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78135734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3721;AVGPOST=0.9971;RSQ=0.9948;ERATE=0.0007;THETA=0.0002;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 78135997 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.198;LDAF=0.0141;AVGPOST=0.9782;RSQ=0.3938;ERATE=0.0025;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78136047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0037;AVGPOST=0.9960;RSQ=0.5485;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78136186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6590;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78136238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4941;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78136357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78136422 . G GT 491 PASS INDEL;BAVGPOST=0.984;BRSQ=0.567;LDAF=0.0315;AVGPOST=0.9649;RSQ=0.5467;ERATE=0.0058;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78136435 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.561;LDAF=0.0426;AVGPOST=0.9513;RSQ=0.5370;ERATE=0.0098;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78136534 . ACT A 111 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8845;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78136592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3723;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 78136683 . CTG C 148 PASS INDEL;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4115;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78136708 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.477;LDAF=0.0049;AVGPOST=0.9926;RSQ=0.4078;ERATE=0.0016;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78136718 . T TA 212 PASS INDEL;BAVGPOST=0.978;BRSQ=0.684;LDAF=0.0442;AVGPOST=0.9580;RSQ=0.6382;ERATE=0.0056;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 78136719 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.754;LDAF=0.1690;AVGPOST=0.8932;RSQ=0.6988;ERATE=0.0334;THETA=0.0004;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 78136763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.7965;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78136880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3722;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0006;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 78136891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0226;AVGPOST=0.9996;RSQ=0.9913;ERATE=0.0003;THETA=0.0001;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78137251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5365;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78137252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4913;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78137487 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7400;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78137588 . AC A 230 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7961;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78137696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7672;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78137816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9204;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78137876 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7807;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78137882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0509;AVGPOST=0.9995;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78137957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78138009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8483;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78138321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9137;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78138365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78138375 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8971;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78138376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78138620 . AT A 567 PASS INDEL;BAVGPOST=0.992;BRSQ=0.614;LDAF=0.0123;AVGPOST=0.9923;RSQ=0.7437;ERATE=0.0011;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78138741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78138823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78138875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78138955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4227;AVGPOST=0.9975;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 78139220 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4123;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78139278 . T TCA 1777 PASS INDEL;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0134;AVGPOST=0.9987;RSQ=0.9595;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78139402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78139477 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78139599 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8483;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78139625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78139812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0375;AVGPOST=0.9986;RSQ=0.9834;ERATE=0.0003;THETA=0.0006;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 78139844 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6703;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78139857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6880;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78139944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9055;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78140234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0765;AVGPOST=0.9984;RSQ=0.9919;ERATE=0.0004;THETA=0.0004;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 78140495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2412;AVGPOST=0.9978;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 78140532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4989;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78140601 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.626;LDAF=0.0059;AVGPOST=0.9927;RSQ=0.5408;ERATE=0.0010;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78140630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.723;LDAF=0.0083;AVGPOST=0.9952;RSQ=0.7575;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78140720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3481;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78140968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5993;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78140969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78141144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78141153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78141163 . AG A 106 PASS INDEL;BAVGPOST=0.983;BRSQ=0.601;LDAF=0.0317;AVGPOST=0.9648;RSQ=0.5834;ERATE=0.0021;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78141164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0937;AVGPOST=0.9972;RSQ=0.9853;ERATE=0.0007;THETA=0.0004;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 78141561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5421;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78141584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0047;AVGPOST=0.9976;RSQ=0.7818;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78142080 . T TG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5771;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78142085 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7065;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78142192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4231;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0003;THETA=0.0008;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 78142199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4906;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78142231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8977;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78142258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4873;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78142292 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0098;AVGPOST=0.9979;RSQ=0.9204;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78142376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.573;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78142567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3719;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 78142585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5304;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78142603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3808;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78142830 . CCTGA C 336 PASS INDEL;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9066;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78142879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7615;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78142961 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0014;AVGPOST=0.9977;RSQ=0.3656;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78143001 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.958;LDAF=0.0323;AVGPOST=0.9964;RSQ=0.9603;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 78143023 . A AAAAC 7725 PASS INDEL;BAVGPOST=0.991;BRSQ=0.915;LDAF=0.0535;AVGPOST=0.9888;RSQ=0.9261;ERATE=0.0004;THETA=0.0003;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 78143036 . A AAAC 5724 PASS INDEL;BAVGPOST=0.992;BRSQ=0.926;LDAF=0.0524;AVGPOST=0.9900;RSQ=0.9350;ERATE=0.0003;THETA=0.0002;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78143037 . A AAC 4948 PASS INDEL;BAVGPOST=0.992;BRSQ=0.920;LDAF=0.0524;AVGPOST=0.9895;RSQ=0.9303;ERATE=0.0003;THETA=0.0004;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78143038 . A AC 2323 PASS INDEL;BAVGPOST=0.992;BRSQ=0.920;LDAF=0.0525;AVGPOST=0.9890;RSQ=0.9265;ERATE=0.0004;THETA=0.0012;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78143127 . TTAAA T 56 PASS INDEL;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.6821;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78143409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4234;AVGPOST=0.9959;RSQ=0.9938;ERATE=0.0007;THETA=0.0005;AC=923;AN=2184 GT:DS:GL:BD 0.42261904 0
1 78143467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7996;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78143500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0154;AVGPOST=0.9984;RSQ=0.9596;ERATE=0.0003;THETA=0.0009;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78143570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.453;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5835;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78143583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.9953;AVGPOST=0.9997;RSQ=0.9733;ERATE=0.0003;THETA=0.0018;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 78143897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8187;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78144150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5696;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78144286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5574;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78144498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78144543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5810;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78144600 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6573;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78144742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6535;ERATE=0.0012;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78144825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78144833 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78144862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4951;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78145087 . T TTC 137 PASS INDEL;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78145198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0100;AVGPOST=0.9984;RSQ=0.9396;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78145222 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0130;AVGPOST=0.9979;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78145223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0139;AVGPOST=0.9978;RSQ=0.9444;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78145297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78145376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6066;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78145426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78145678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78145703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8864;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78145755 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0082;AVGPOST=0.9993;RSQ=0.9674;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78145836 . CTAAAG C 872 PASS INDEL;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0048;AVGPOST=0.9972;RSQ=0.7590;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78145842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78146151 . AC A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5993;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78146342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78146343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8390;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78146671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0133;AVGPOST=0.9989;RSQ=0.9613;ERATE=0.0005;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78146683 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6718;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78146817 . T TG 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78146874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.809;LDAF=0.0064;AVGPOST=0.9981;RSQ=0.8954;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78146881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78146952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6939;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78147132 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5334;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78147139 . AC A 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4737;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78147311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.559;LDAF=0.0021;AVGPOST=0.9965;RSQ=0.3775;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78147355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.657;LDAF=0.0040;AVGPOST=0.9976;RSQ=0.7276;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78147460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8112;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78147738 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9809;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78147832 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78148011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0100;AVGPOST=0.9990;RSQ=0.9671;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78148103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0254;AVGPOST=0.9994;RSQ=0.9889;ERATE=0.0003;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78148176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78148541 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0097;AVGPOST=0.9987;RSQ=0.9507;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78148646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0075;AVGPOST=0.9916;RSQ=0.6025;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78148717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0224;AVGPOST=0.9914;RSQ=0.8583;ERATE=0.0006;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78148776 rs11276966 CGCCGTCGCA C 8015 PASS INDEL;BAVGPOST=0.791;BRSQ=0.513;LDAF=0.6984;AVGPOST=0.7119;RSQ=0.4257;ERATE=0.0221;THETA=0.0006;AC=1660;AN=2184 GT:DS:GL:BD 0.76007324 1
1 78148942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0126;AVGPOST=0.9957;RSQ=0.8376;ERATE=0.0007;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78149247 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.372;LDAF=0.0063;AVGPOST=0.9915;RSQ=0.4656;ERATE=0.0012;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78149333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.506;LDAF=0.0030;AVGPOST=0.9961;RSQ=0.4759;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78149643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7295;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78149853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7828;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78149902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.889;LDAF=0.0227;AVGPOST=0.9941;RSQ=0.9063;ERATE=0.0004;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78149941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4214;AVGPOST=0.9966;RSQ=0.9952;ERATE=0.0003;THETA=0.0041;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 78149977 . TTCA T 171 PASS INDEL;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8193;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78150089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78150137 . CTATT C 105 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4279;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78150150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.497;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3832;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78150339 . C CA 2750 PASS INDEL;BAVGPOST=0.972;BRSQ=0.835;LDAF=0.1055;AVGPOST=0.9527;RSQ=0.7949;ERATE=0.0082;THETA=0.0004;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 78150379 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.5751;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78150435 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8720;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78150451 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8518;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78150519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.790;LDAF=0.0056;AVGPOST=0.9981;RSQ=0.8665;ERATE=0.0003;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78150634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3710;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=811;AN=2184 GT:DS:GL:BD 0.37133700 0
1 78150687 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8560;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78150819 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5347;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78151049 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6538;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78151103 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8082;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78151225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0105;AVGPOST=0.9943;RSQ=0.8058;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78151240 rs67139134 TCTC T 27844 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2940;AVGPOST=0.9967;RSQ=0.9932;ERATE=0.0006;THETA=0.0007;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 78151677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5518;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78151791 . A AT 164 PASS INDEL;BAVGPOST=0.976;BRSQ=0.537;LDAF=0.0477;AVGPOST=0.9426;RSQ=0.4922;ERATE=0.0162;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 78151820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78152065 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0090;AVGPOST=0.9984;RSQ=0.9294;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78152163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8101;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78152249 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0293;AVGPOST=0.9978;RSQ=0.9707;ERATE=0.0003;THETA=0.0026;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 78152394 . CAG C 2335 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9848;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78152456 . GT G 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0030;AVGPOST=0.9978;RSQ=0.7032;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78152668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.4191;AVGPOST=0.9733;RSQ=0.9602;ERATE=0.0028;THETA=0.0007;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 78152776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.780;LDAF=0.0079;AVGPOST=0.9936;RSQ=0.6953;ERATE=0.0005;THETA=0.0045;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78152792 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.933;LDAF=0.2276;AVGPOST=0.9590;RSQ=0.9229;ERATE=0.0027;THETA=0.0006;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 78152805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.938;LDAF=0.3030;AVGPOST=0.9134;RSQ=0.8389;ERATE=0.0100;THETA=0.0006;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 78152849 . AC A 49 PASS INDEL;BAVGPOST=0.545;BRSQ=0.072;LDAF=0.1588;AVGPOST=0.9735;RSQ=0.9245;ERATE=0.0014;THETA=0.0002;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 78153097 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0205;AVGPOST=0.9907;RSQ=0.8169;ERATE=0.0009;THETA=0.0009;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78153175 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0159;AVGPOST=0.9938;RSQ=0.8269;ERATE=0.0007;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78153250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0203;AVGPOST=0.9760;RSQ=0.5847;ERATE=0.0008;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78153341 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.427;LDAF=0.0411;AVGPOST=0.9434;RSQ=0.4465;ERATE=0.0058;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78153381 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.450;LDAF=0.0072;AVGPOST=0.9931;RSQ=0.5931;ERATE=0.0014;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78153468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0274;AVGPOST=0.9971;RSQ=0.9545;ERATE=0.0004;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78153501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.7238;AVGPOST=0.9845;RSQ=0.9669;ERATE=0.0006;THETA=0.0007;AC=1584;AN=2184 GT:DS:GL:BD 0.72527474 1
1 78153550 . C CT 691 PASS INDEL;BAVGPOST=0.975;BRSQ=0.565;LDAF=0.0577;AVGPOST=0.9312;RSQ=0.4974;ERATE=0.0106;THETA=0.0009;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 78153552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0147;AVGPOST=0.9985;RSQ=0.9554;ERATE=0.0005;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78153572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0025;AVGPOST=0.9960;RSQ=0.3244;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78153821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2946;AVGPOST=0.9899;RSQ=0.9807;ERATE=0.0011;THETA=0.0002;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 78153837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0141;AVGPOST=0.9990;RSQ=0.9671;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78153883 . C CA 65 PASS INDEL;BAVGPOST=0.989;BRSQ=0.508;LDAF=0.0171;AVGPOST=0.9793;RSQ=0.5121;ERATE=0.0039;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78154120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9996;RSQ=0.9862;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78154263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7440;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78154264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.9016;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78154460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5956;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78154561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5605;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78154563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9340;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78154693 . ATC A 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78154794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78154944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78154968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78155066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9991;RSQ=0.9723;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78155278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9374;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78155518 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78155530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8065;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78155578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0187;AVGPOST=0.9985;RSQ=0.9732;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78155597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78155619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78155720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6624;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78155896 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78155974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78155999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78156134 . CTG C 135 PASS INDEL;BAVGPOST=0.989;BRSQ=0.621;LDAF=0.0289;AVGPOST=0.9663;RSQ=0.5432;ERATE=0.0089;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78156148 . ATG A 165 PASS INDEL;BAVGPOST=0.987;BRSQ=0.603;LDAF=0.0286;AVGPOST=0.9682;RSQ=0.5422;ERATE=0.0131;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78156240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78156522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0148;AVGPOST=0.9944;RSQ=0.8521;ERATE=0.0005;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78156535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.486;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3536;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78156548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.628;LDAF=0.0064;AVGPOST=0.9963;RSQ=0.8144;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78156660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5471;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78156863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.4160;AVGPOST=0.9798;RSQ=0.9722;ERATE=0.0017;THETA=0.0008;AC=917;AN=2184 GT:DS:GL:BD 0.41987181 0
1 78156975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.1783;AVGPOST=0.9941;RSQ=0.9858;ERATE=0.0004;THETA=0.0004;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 78156976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7073;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78157185 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78157221 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6749;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78157671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78157949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3705;AVGPOST=0.9940;RSQ=0.9898;ERATE=0.0007;THETA=0.0004;AC=811;AN=2184 GT:DS:GL:BD 0.37133700 0
1 78157951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.712;LDAF=0.0080;AVGPOST=0.9953;RSQ=0.7825;ERATE=0.0007;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78158053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6236;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78158189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4772;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78158341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0036;AVGPOST=0.9987;RSQ=0.8903;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78158376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78158469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78158478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0509;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78158501 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0258;AVGPOST=0.9993;RSQ=0.9871;ERATE=0.0004;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78158514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.665;LDAF=0.0076;AVGPOST=0.9937;RSQ=0.6564;ERATE=0.0006;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78158539 . T TG 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4249;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78158712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0030;AVGPOST=0.9962;RSQ=0.5087;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78158717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0047;AVGPOST=0.9985;RSQ=0.8686;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78158781 . A AG 114 PASS INDEL;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6585;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78158839 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78158858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8436;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78158928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8597;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78158935 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6150;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78158960 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0262;AVGPOST=0.9986;RSQ=0.9751;ERATE=0.0005;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78159627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7617;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78159773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5437;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78159947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4825;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78159948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4412;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78160085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78160246 rs71864867 AAT A 16178 PASS INDEL;BAVGPOST=0.844;BRSQ=0.620;LDAF=0.6838;AVGPOST=0.7637;RSQ=0.5488;ERATE=0.0367;THETA=0.0007;AC=1581;AN=2184 GT:DS:GL:BD 0.72390109 1
1 78160366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0167;AVGPOST=0.9989;RSQ=0.9711;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78160464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4408;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78160588 . CA C 179 PASS INDEL;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78160886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.904;LDAF=0.0168;AVGPOST=0.9944;RSQ=0.8657;ERATE=0.0005;THETA=0.0013;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78160925 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78160964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78160973 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3848;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78160996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7136;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78161009 . T TA 69 PASS INDEL;BAVGPOST=0.992;BRSQ=0.479;LDAF=0.0282;AVGPOST=0.9587;RSQ=0.3899;ERATE=0.0060;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78161099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7261;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78161143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7051;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78161194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.5741;ERATE=0.0008;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78161230 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0042;AVGPOST=0.9975;RSQ=0.7828;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78161388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.773;LDAF=0.0161;AVGPOST=0.9930;RSQ=0.8393;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78161516 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8900;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78161630 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0158;AVGPOST=0.9994;RSQ=0.9818;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78161794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.767;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8644;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78161933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78161938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6508;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78161998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4619;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78162042 . TG T 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8006;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78162073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.975;LDAF=0.1170;AVGPOST=0.9934;RSQ=0.9791;ERATE=0.0003;THETA=0.0005;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 78162283 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0069;AVGPOST=0.9959;RSQ=0.7635;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78162548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9290;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78162938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78163080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0516;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 78163171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78163218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78163247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78163371 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78163482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78163534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78163609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78163665 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8284;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78163752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78163837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.792;LDAF=0.0119;AVGPOST=0.9892;RSQ=0.6521;ERATE=0.0020;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78163980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.897;LDAF=0.0438;AVGPOST=0.9929;RSQ=0.9355;ERATE=0.0010;THETA=0.0006;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 78163988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.5604;ERATE=0.0006;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78164191 . T TG 532 PASS INDEL;BAVGPOST=0.995;BRSQ=0.836;LDAF=0.0133;AVGPOST=0.9981;RSQ=0.9367;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78164208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.560;LDAF=0.0116;AVGPOST=0.9830;RSQ=0.4238;ERATE=0.0031;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78164305 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.534;LDAF=0.0031;AVGPOST=0.9965;RSQ=0.5435;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78164339 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.980;LDAF=0.2892;AVGPOST=0.9820;RSQ=0.9655;ERATE=0.0017;THETA=0.0005;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 78164433 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8241;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78164522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7377;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78164542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0227;AVGPOST=0.9973;RSQ=0.9579;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78164639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6494;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78164689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6107;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78164902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4217;AVGPOST=0.9968;RSQ=0.9946;ERATE=0.0004;THETA=0.0004;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 78164976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5403;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78165021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5057;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78165075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78165105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4798;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78165158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6472;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78165201 . C CA 124 PASS INDEL;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5211;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78165208 . AAGAG A 899 PASS INDEL;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9410;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78165225 . CAA C 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78165411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78165437 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5825;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78165827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8296;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78165900 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0029;AVGPOST=0.9964;RSQ=0.5707;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78166248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9914;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78166329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5222;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78166472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4815;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78166547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5543;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78166615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.876;LDAF=0.0285;AVGPOST=0.9911;RSQ=0.8846;ERATE=0.0016;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78166673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78166849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9365;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78166978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 78167176 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78167187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78167268 . CAGG C 222 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7331;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78167296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78167509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0223;AVGPOST=0.9994;RSQ=0.9869;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78167825 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.751;LDAF=0.0237;AVGPOST=0.9972;RSQ=0.9498;ERATE=0.0005;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78167825 . T TAA 1972 PASS INDEL;BAVGPOST=0.623;BRSQ=0.076;LDAF=0.7477;AVGPOST=0.7352;RSQ=0.4268;ERATE=0.0091;THETA=0.0007;AC=1735;AN=2184 GT:DS:GL:BD 0.79441392 1
1 78167905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0669;AVGPOST=0.9985;RSQ=0.9893;ERATE=0.0004;THETA=0.0006;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 78167906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0004;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78167957 . AG A 21 PASS INDEL;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4777;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78168063 . TTTATGTACACA T 1440 PASS INDEL;BAVGPOST=0.997;BRSQ=0.826;LDAF=0.0068;AVGPOST=0.9961;RSQ=0.7752;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78168147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9914;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78168469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78168507 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78168585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6733;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78168614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7771;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78168691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78168708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7833;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78168758 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0681;AVGPOST=0.9983;RSQ=0.9881;ERATE=0.0003;THETA=0.0005;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 78168816 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78168836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7340;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78169106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4549;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78169663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7354;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78169714 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8512;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78169732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6518;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78169733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7002;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78169735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0132;AVGPOST=0.9993;RSQ=0.9759;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78169778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78169994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78170023 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78170100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6654;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78170122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0055;AVGPOST=0.9982;RSQ=0.8593;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78170229 . G GT 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.547;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6173;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78170283 . CTT C 181 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5202;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78170284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7386;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78170287 . T TA 204 PASS INDEL;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6830;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78170382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78170535 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78170574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4233;AVGPOST=0.9975;RSQ=0.9960;ERATE=0.0005;THETA=0.0006;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 78170623 . G GT 461 PASS INDEL;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8745;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78170658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78170802 . TA T 102 PASS INDEL;BAVGPOST=0.962;BRSQ=0.352;LDAF=0.0701;AVGPOST=0.8973;RSQ=0.3802;ERATE=0.0137;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 78170832 rs35656157 C CA 407 PASS INDEL;BAVGPOST=0.992;BRSQ=0.730;LDAF=0.0122;AVGPOST=0.9925;RSQ=0.7491;ERATE=0.0018;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78170840 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.964;LDAF=0.0766;AVGPOST=0.9982;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 78170841 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.843;LDAF=0.0120;AVGPOST=0.9963;RSQ=0.8636;ERATE=0.0007;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78170852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78170996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.765;LDAF=0.0168;AVGPOST=0.9944;RSQ=0.8651;ERATE=0.0008;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78171025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.939;LDAF=0.4194;AVGPOST=0.9869;RSQ=0.9798;ERATE=0.0015;THETA=0.0003;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 78171290 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4242;AVGPOST=0.9952;RSQ=0.9933;ERATE=0.0008;THETA=0.0003;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 78171536 . ACT A 111 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5587;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78171550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0351;AVGPOST=0.9982;RSQ=0.9731;ERATE=0.0003;THETA=0.0008;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 78171583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8124;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78171630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78171696 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0154;AVGPOST=0.9959;RSQ=0.8990;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78171708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0147;AVGPOST=0.9978;RSQ=0.9458;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78171712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5606;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78171780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4707;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78171811 . A ATT 51 PASS INDEL;BAVGPOST=0.998;BRSQ=0.671;LDAF=0.0082;AVGPOST=0.9897;RSQ=0.5375;ERATE=0.0021;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78171841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9830;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78171932 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78172216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0507;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78172428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9997;RSQ=0.9932;ERATE=0.0003;THETA=0.0027;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78172433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78172460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0259;AVGPOST=0.9993;RSQ=0.9870;ERATE=0.0004;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78172616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78172669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0241;AVGPOST=0.9985;RSQ=0.9747;ERATE=0.0003;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78172705 . CA C 134 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6437;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78172844 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78172854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0378;AVGPOST=0.9995;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 78172939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0104;AVGPOST=0.9973;RSQ=0.8914;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78173087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7759;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78173105 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78173279 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0508;AVGPOST=0.9994;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78173463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78173604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78173607 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8900;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78173648 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5852;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78173794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78173863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78173943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78173980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0105;AVGPOST=0.9989;RSQ=0.9589;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78174097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78174133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78174143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7215;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78174305 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5754;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78174437 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6684;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78174472 . C CA 46493 PASS INDEL;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.9950;AVGPOST=0.9989;RSQ=0.9223;ERATE=0.0004;THETA=0.0038;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 78174475 rs11388879 A AG 134130 PASS INDEL;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.9952;AVGPOST=0.9993;RSQ=0.9435;ERATE=0.0003;THETA=0.0002;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 78174590 . T TA 5959 PASS INDEL;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0597;AVGPOST=0.9947;RSQ=0.9629;ERATE=0.0003;THETA=0.0004;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 78174782 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78174890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8556;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78174985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78174999 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9985;RSQ=0.9411;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78175022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2825;AVGPOST=0.9964;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 78175165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8960;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78175309 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.728;LDAF=0.0058;AVGPOST=0.9959;RSQ=0.6809;ERATE=0.0012;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78175345 . CTA C 17 PASS INDEL;BAVGPOST=0.985;BRSQ=0.418;LDAF=0.0392;AVGPOST=0.9488;RSQ=0.4817;ERATE=0.0065;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78175346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0022;AVGPOST=0.9969;RSQ=0.4404;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78175479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8711;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78175556 . ATG A 89 PASS INDEL;BAVGPOST=0.998;BRSQ=0.794;LDAF=0.0062;AVGPOST=0.9958;RSQ=0.7551;ERATE=0.0006;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78175692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8789;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78175742 . AC A 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7129;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78176019 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78176406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.4302;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78176416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0106;AVGPOST=0.9984;RSQ=0.9434;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78176418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6265;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78176474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.8087;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78176502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9191;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78176641 rs112042642 CTTTTGA C 3164 PASS INDEL;BAVGPOST=0.997;BRSQ=0.919;LDAF=0.0163;AVGPOST=0.9975;RSQ=0.9336;ERATE=0.0004;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78176826 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8509;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78176952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5749;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78177035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78177080 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0225;AVGPOST=0.9984;RSQ=0.9729;ERATE=0.0004;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78177161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0879;AVGPOST=0.9984;RSQ=0.9919;ERATE=0.0004;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 78177382 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78177677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78177742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78178186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0082;AVGPOST=0.9989;RSQ=0.9518;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78178194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.6955;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78178306 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0262;AVGPOST=0.9986;RSQ=0.9749;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78178319 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0063;AVGPOST=0.9970;RSQ=0.8037;ERATE=0.0008;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78178415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7028;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78178527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8325;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78178552 . G GA 11 PASS INDEL;BAVGPOST=0.996;BRSQ=0.489;LDAF=0.0133;AVGPOST=0.9824;RSQ=0.4597;ERATE=0.0038;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78178576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78178601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78178605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0936;AVGPOST=0.9991;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 78178828 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7590;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78178834 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78178872 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78178875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78178961 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78178976 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4235;AVGPOST=0.9997;RSQ=0.9996;ERATE=0.0003;THETA=0.0002;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 78179213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3722;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0005;THETA=0.0003;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 78179353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0234;AVGPOST=0.9981;RSQ=0.9720;ERATE=0.0003;THETA=0.0017;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78179531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0326;AVGPOST=0.9994;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 78179744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78179750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9456;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78179774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6158;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78179949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78180002 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8383;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78180321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78180376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78180544 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78180564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78180568 . ATCTT A 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0027;AVGPOST=0.9966;RSQ=0.5171;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78180639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78180727 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6765;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78180780 . T TA 196 PASS INDEL;BAVGPOST=0.989;BRSQ=0.473;LDAF=0.0218;AVGPOST=0.9720;RSQ=0.5034;ERATE=0.0039;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78180900 . C CT 64 PASS INDEL;BAVGPOST=0.991;BRSQ=0.533;LDAF=0.0227;AVGPOST=0.9730;RSQ=0.5490;ERATE=0.0036;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78181153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0112;AVGPOST=0.9985;RSQ=0.9372;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78181349 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78181358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78181404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78181440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78181461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78181559 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78181654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78181656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9884;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78181743 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78181850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78181971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9785;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78182076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7484;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78182077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6455;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78182094 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78182178 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5405;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78182251 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78182356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5313;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78182468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78182717 . A AT 100 PASS INDEL;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0041;AVGPOST=0.9934;RSQ=0.3920;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78182724 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.771;LDAF=0.0170;AVGPOST=0.9957;RSQ=0.8874;ERATE=0.0004;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78182933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9949;RSQ=0.8587;ERATE=0.0008;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78182946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.639;LDAF=0.0051;AVGPOST=0.9968;RSQ=0.7328;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78183166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.445;LDAF=0.0059;AVGPOST=0.9920;RSQ=0.4575;ERATE=0.0009;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78183219 . CA C 2058 PASS INDEL;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0166;AVGPOST=0.9974;RSQ=0.9418;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78183670 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78183754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78183855 . A AAT 55 PASS INDEL;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.5839;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78183861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.4232;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 78183884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9305;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78183934 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78184117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78184143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78184163 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78184227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78184325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2943;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 78184345 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78184349 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78184433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1772;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 78184490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6990;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78184695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78184778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6910;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78184783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5126;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78184784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.753;LDAF=0.0069;AVGPOST=0.9950;RSQ=0.7338;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78184817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6324;ERATE=0.0006;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78184818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.835;LDAF=0.0182;AVGPOST=0.9961;RSQ=0.9235;ERATE=0.0005;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78184849 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78184897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0147;AVGPOST=0.9982;RSQ=0.9490;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78185058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9013;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78185127 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7170;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78185488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.870;LDAF=0.0139;AVGPOST=0.9975;RSQ=0.9172;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78185693 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0041;AVGPOST=0.9978;RSQ=0.7627;ERATE=0.0007;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78185760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7234;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78185833 . GA G 81 PASS INDEL;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5091;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78185849 . T TG 324 PASS INDEL;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.0302;AVGPOST=0.9910;RSQ=0.8700;ERATE=0.0006;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78186322 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0229;AVGPOST=0.9990;RSQ=0.9838;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78186588 . G GT 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78186605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78186647 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78186819 . CA C 531 PASS INDEL;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0053;AVGPOST=0.9958;RSQ=0.6743;ERATE=0.0011;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78186960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78187139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78187444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0426;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 78187467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78187488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78187670 . G GT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5077;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78187731 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7189;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78187783 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78187983 . C CA 463 PASS INDEL;BAVGPOST=0.993;BRSQ=0.705;LDAF=0.0128;AVGPOST=0.9939;RSQ=0.8171;ERATE=0.0006;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78187985 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78188011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8811;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78188152 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78188257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0106;AVGPOST=0.9973;RSQ=0.9026;ERATE=0.0006;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78188479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9268;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78188763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8844;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78188870 . CA C 4669 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0429;AVGPOST=0.9982;RSQ=0.9823;ERATE=0.0004;THETA=0.0005;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 78188884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78188917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0192;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78189051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78189146 . T TA 151 PASS INDEL;BAVGPOST=0.996;BRSQ=0.587;LDAF=0.0130;AVGPOST=0.9875;RSQ=0.6197;ERATE=0.0018;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78189147 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9268;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78189221 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78189241 . CTG C 156 PASS INDEL;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5616;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78189298 . T TA 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4651;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78189380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7176;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78189490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0413;AVGPOST=0.9985;RSQ=0.9829;ERATE=0.0004;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 78189495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0049;AVGPOST=0.9975;RSQ=0.8086;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78189565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.691;LDAF=0.9902;AVGPOST=0.9907;RSQ=0.6564;ERATE=0.0010;THETA=0.0004;AC=2170;AN=2184 GT:DS:GL:BD 0.99358976 1
1 78189717 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8587;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78189728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9821;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78189819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.537;LDAF=0.0056;AVGPOST=0.9919;RSQ=0.4318;ERATE=0.0023;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78189865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8290;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78190035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0031;AVGPOST=0.9969;RSQ=0.6448;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78190200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78190215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78190240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5611;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78190280 . CAT C 433 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78190363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78190404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6336;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78190449 . AATGAG A 147 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78190530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78190582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.834;LDAF=0.0071;AVGPOST=0.9963;RSQ=0.7952;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78190705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6860;ERATE=0.0005;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78190734 . C CA 141 PASS INDEL;BAVGPOST=0.991;BRSQ=0.350;LDAF=0.0125;AVGPOST=0.9835;RSQ=0.5129;ERATE=0.0026;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78190736 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7347;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78191098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78191354 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78191610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78191640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78191697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7233;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78191727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.7745;AVGPOST=0.9787;RSQ=0.9546;ERATE=0.0040;THETA=0.0003;AC=1699;AN=2184 GT:DS:GL:BD 0.77793038 1
1 78191737 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0129;AVGPOST=0.9993;RSQ=0.9745;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78191910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5476;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78191925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6898;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78192157 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0053;AVGPOST=0.9977;RSQ=0.8370;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78192445 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.845;LDAF=0.0104;AVGPOST=0.9960;RSQ=0.8464;ERATE=0.0004;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78192453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7041;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78192478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0226;AVGPOST=0.9985;RSQ=0.9711;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78192490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4242;AVGPOST=0.9967;RSQ=0.9947;ERATE=0.0005;THETA=0.0002;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 78192653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0308;AVGPOST=0.9983;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 78192711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6766;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78192882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5006;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78192915 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78193044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7272;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78193146 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.898;LDAF=0.0123;AVGPOST=0.9978;RSQ=0.9386;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78193179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0086;AVGPOST=0.9984;RSQ=0.9295;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78193191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8392;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78193385 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78193513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6960;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78193852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78193883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0238;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78193924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78193968 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78194056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78194068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78194122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78194235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78194266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78194300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78194404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78194434 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78194582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8708;ERATE=0.0020;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78194663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9231;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78194664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.6054;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78195090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4484;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78195128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6277;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78195176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78195366 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0305;AVGPOST=0.9989;RSQ=0.9877;ERATE=0.0003;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 78195394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78195476 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78195557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78195662 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78195665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0165;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0005;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78195826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7697;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78196097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78196167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8784;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78196273 . TAAA T 240 PASS INDEL;BAVGPOST=0.996;BRSQ=0.905;LDAF=0.0261;AVGPOST=0.9958;RSQ=0.9343;ERATE=0.0004;THETA=0.0008;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78196274 rs72379380 AAAG A 2968 PASS INDEL;BAVGPOST=0.995;BRSQ=0.897;LDAF=0.0278;AVGPOST=0.9925;RSQ=0.8877;ERATE=0.0004;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78196300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78196419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78196503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78196548 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78196574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78196585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78196594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78196595 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78196647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9847;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78196729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78196795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78196807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78196857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.8035;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78197010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0632;AVGPOST=0.9991;RSQ=0.9931;ERATE=0.0004;THETA=0.0005;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 78197120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3725;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 78197317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5628;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78197402 . A AG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6056;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78197474 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8296;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78197514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6444;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78197624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78197671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5303;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78197757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7239;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78198187 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7756;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78198268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6501;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78198314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6701;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78198322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0872;AVGPOST=0.9987;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 78198369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78198474 . C CT 1542 PASS INDEL;BAVGPOST=0.517;BRSQ=0.155;LDAF=0.4989;AVGPOST=0.6615;RSQ=0.3943;ERATE=0.0311;THETA=0.0003;AC=1041;AN=2184 GT:DS:GL:BD 0.47664836 0
1 78198554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0223;AVGPOST=0.9950;RSQ=0.9023;ERATE=0.0004;THETA=0.0011;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78198620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8108;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78198770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8130;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78198862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0282;AVGPOST=0.9966;RSQ=0.9498;ERATE=0.0004;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 78199150 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5736;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78199477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78199490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.8845;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78199611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5081;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78199887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9796;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78199927 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78199967 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78200005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4216;AVGPOST=0.9995;RSQ=0.9993;ERATE=0.0004;THETA=0.0002;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 78200531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6440;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78200555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.841;LDAF=0.0128;AVGPOST=0.9978;RSQ=0.9252;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78200643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.801;LDAF=0.0173;AVGPOST=0.9892;RSQ=0.7828;ERATE=0.0006;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78200708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0303;AVGPOST=0.9939;RSQ=0.9125;ERATE=0.0011;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 78200807 rs111742775 C CA 13183 PASS INDEL;BAVGPOST=0.931;BRSQ=0.875;LDAF=0.3984;AVGPOST=0.8564;RSQ=0.7787;ERATE=0.0362;THETA=0.0007;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 78200914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.779;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8166;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78201286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0135;AVGPOST=0.9989;RSQ=0.9717;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78201342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78201465 . A AAAC 314 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8033;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78201575 . CA C 904 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0101;AVGPOST=0.9991;RSQ=0.9622;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78201590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78201745 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4237;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0003;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 78201758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78201760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78201796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78201804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78201886 . AT A 75 PASS INDEL;BAVGPOST=0.987;BRSQ=0.584;LDAF=0.0192;AVGPOST=0.9831;RSQ=0.6642;ERATE=0.0006;THETA=0.0033;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78201889 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0684;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0003;THETA=0.0019;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 78201919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78202123 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78202165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78202187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0206;AVGPOST=0.9988;RSQ=0.9738;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78202518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6578;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78202668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78202720 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78202727 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7009;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78202741 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.3680;AVGPOST=0.9923;RSQ=0.9872;ERATE=0.0017;THETA=0.0007;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 78202791 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9281;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78202858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78203112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0385;AVGPOST=0.9981;RSQ=0.9778;ERATE=0.0003;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 78203116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7221;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78203308 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0031;AVGPOST=0.9967;RSQ=0.5861;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78203446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78203489 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.4036;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78203519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4238;AVGPOST=0.9968;RSQ=0.9950;ERATE=0.0007;THETA=0.0004;AC=927;AN=2184 GT:DS:GL:BD 0.42445055 0
1 78203662 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78204223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0030;AVGPOST=0.9965;RSQ=0.5656;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78204227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0215;AVGPOST=0.9977;RSQ=0.9560;ERATE=0.0003;THETA=0.0016;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78204327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4436;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78204331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3535;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78204458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8275;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78204669 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8584;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78204894 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78205001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78205126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78205259 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0187;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78205354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8581;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78205469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78205621 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78205629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0519;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 78205691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7378;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78205792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78205945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0101;AVGPOST=0.9980;RSQ=0.9108;ERATE=0.0004;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78206340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78206384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78206682 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2258;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 78206733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0087;AVGPOST=0.9997;RSQ=0.9851;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78206834 . CTAA C 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5825;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78206895 . A AT 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78206903 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0681;AVGPOST=0.9991;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 78206991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78207025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78207268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9715;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78207342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78207343 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78207374 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78207502 . T TA 35 PASS INDEL;BAVGPOST=0.998;BRSQ=0.489;LDAF=0.0035;AVGPOST=0.9955;RSQ=0.4579;ERATE=0.0010;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78207531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78207721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0262;AVGPOST=0.9987;RSQ=0.9787;ERATE=0.0004;THETA=0.0012;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78207914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0098;AVGPOST=0.9984;RSQ=0.9335;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78207958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78208005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0116;AVGPOST=0.9986;RSQ=0.9595;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78208061 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78208185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.9020;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78208262 rs34380322 A AT 43525 PASS INDEL;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4237;AVGPOST=0.9949;RSQ=0.9925;ERATE=0.0010;THETA=0.0003;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 78208455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4665;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78208484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0332;AVGPOST=0.9981;RSQ=0.9780;ERATE=0.0003;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 78208522 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7302;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78208619 . AT A 665 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0275;AVGPOST=0.9781;RSQ=0.6922;ERATE=0.0009;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78208638 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0082;AVGPOST=0.9951;RSQ=0.7478;ERATE=0.0007;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78208689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0053;AVGPOST=0.9950;RSQ=0.6664;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78208763 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3782;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78208789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.818;LDAF=0.0197;AVGPOST=0.9963;RSQ=0.9132;ERATE=0.0005;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78208857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.475;LDAF=0.0103;AVGPOST=0.9861;RSQ=0.4713;ERATE=0.0014;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78208922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7455;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78209025 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7410;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78209205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2398;AVGPOST=0.9955;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 78209269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78209308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0263;AVGPOST=0.9986;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78209416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8151;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78209463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78209791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7397;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78209886 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78209905 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78210034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.8050;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78210117 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0372;AVGPOST=0.9986;RSQ=0.9868;ERATE=0.0003;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 78210286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78210401 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0024;AVGPOST=0.9963;RSQ=0.3889;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78210558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0226;AVGPOST=0.9996;RSQ=0.9923;ERATE=0.0003;THETA=0.0017;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78210584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78210637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7877;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78210874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.741;LDAF=0.9933;AVGPOST=0.9954;RSQ=0.7337;ERATE=0.0005;THETA=0.0009;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 78211122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78211157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78211214 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8587;ERATE=0.0004;THETA=0.0040;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78211944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.935;LDAF=0.0727;AVGPOST=0.9915;RSQ=0.9512;ERATE=0.0006;THETA=0.0008;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 78211992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0575;AVGPOST=0.9922;RSQ=0.9444;ERATE=0.0006;THETA=0.0003;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 78212021 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.535;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4905;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78212083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0314;AVGPOST=0.9969;RSQ=0.9607;ERATE=0.0004;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 78212891 rs68171129 A ATAG 15397 PASS INDEL;BAVGPOST=0.973;BRSQ=0.951;LDAF=0.3556;AVGPOST=0.9726;RSQ=0.9587;ERATE=0.0019;THETA=0.0005;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 78212894 . G GTAAT 22824 PASS INDEL;BAVGPOST=0.973;BRSQ=0.952;LDAF=0.3507;AVGPOST=0.9545;RSQ=0.9305;ERATE=0.0098;THETA=0.0005;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 78212895 . T TA 1882 PASS INDEL;BAVGPOST=0.908;BRSQ=0.803;LDAF=0.2683;AVGPOST=0.8715;RSQ=0.7635;ERATE=0.0209;THETA=0.0010;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 78213434 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4241;AVGPOST=0.9925;RSQ=0.9890;ERATE=0.0012;THETA=0.0006;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 78213633 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7760;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78213643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9287;ERATE=0.0003;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78213648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5964;ERATE=0.0004;THETA=0.0048;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78213700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6195;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78213761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7323;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78213789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0191;AVGPOST=0.9984;RSQ=0.9681;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78213962 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4866;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78213966 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78214048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0035;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78214283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0042;AVGPOST=0.9975;RSQ=0.7391;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78214347 . CGT C 8 PASS INDEL;BAVGPOST=0.998;BRSQ=0.559;LDAF=0.0056;AVGPOST=0.9932;RSQ=0.5021;ERATE=0.0013;THETA=0.0035;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78214472 . C CT 80 PASS INDEL;BAVGPOST=0.996;BRSQ=0.553;LDAF=0.0127;AVGPOST=0.9872;RSQ=0.6182;ERATE=0.0011;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78214478 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.830;LDAF=0.1957;AVGPOST=0.8850;RSQ=0.7398;ERATE=0.0206;THETA=0.0007;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 78214566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.762;LDAF=0.0060;AVGPOST=0.9988;RSQ=0.9046;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78214668 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3510;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78214679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78214684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0041;AVGPOST=0.9980;RSQ=0.7950;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78214742 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0185;AVGPOST=0.9995;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78214887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7246;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78215067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0640;AVGPOST=0.9973;RSQ=0.9812;ERATE=0.0004;THETA=0.0008;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 78215092 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3799;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78215106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5609;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78215140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.619;LDAF=0.0038;AVGPOST=0.9969;RSQ=0.6935;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78215170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0378;AVGPOST=0.9963;RSQ=0.9608;ERATE=0.0003;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 78215353 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0022;AVGPOST=0.9969;RSQ=0.5128;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78215381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6659;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78215392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0603;AVGPOST=0.9974;RSQ=0.9817;ERATE=0.0003;THETA=0.0004;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 78215411 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8989;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78215575 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7016;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78215668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6628;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78215707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0098;AVGPOST=0.9992;RSQ=0.9640;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78215737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6841;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78215745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0226;AVGPOST=0.9995;RSQ=0.9890;ERATE=0.0004;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78215872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.783;LDAF=0.0095;AVGPOST=0.9950;RSQ=0.8034;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78215907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5810;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78215959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0049;AVGPOST=0.9941;RSQ=0.5198;ERATE=0.0016;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78216007 . AAAAG A 910 PASS INDEL;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0108;AVGPOST=0.9969;RSQ=0.8867;ERATE=0.0006;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78216035 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0100;AVGPOST=0.9987;RSQ=0.9423;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78216044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9160;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78216248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0116;AVGPOST=0.9983;RSQ=0.9440;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78216260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.700;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.5208;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78216313 rs10610793 G GAAAC 2887 PASS INDEL;BAVGPOST=0.965;BRSQ=0.818;LDAF=0.1167;AVGPOST=0.9275;RSQ=0.7092;ERATE=0.0206;THETA=0.0003;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 78216332 . AG A 54 PASS INDEL;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0037;AVGPOST=0.9962;RSQ=0.6147;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78216344 . AG A 9 PASS INDEL;BAVGPOST=0.997;BRSQ=0.445;LDAF=0.0035;AVGPOST=0.9971;RSQ=0.6535;ERATE=0.0007;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78216345 . G GA 551 PASS INDEL;BAVGPOST=0.922;BRSQ=0.546;LDAF=0.1550;AVGPOST=0.8312;RSQ=0.4664;ERATE=0.0420;THETA=0.0003;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 78216356 . A AG 288 PASS INDEL;BAVGPOST=0.993;BRSQ=0.553;LDAF=0.0095;AVGPOST=0.9915;RSQ=0.6767;ERATE=0.0006;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78216363 . AAG A 330 PASS INDEL;BAVGPOST=0.989;BRSQ=0.642;LDAF=0.0324;AVGPOST=0.9658;RSQ=0.5679;ERATE=0.0088;THETA=0.0009;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78216367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0021;AVGPOST=0.9966;RSQ=0.4190;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78216404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8467;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78216535 rs71842459 CTTTA C 23757 PASS INDEL;BAVGPOST=0.982;BRSQ=0.956;LDAF=0.2328;AVGPOST=0.9892;RSQ=0.9752;ERATE=0.0007;THETA=0.0007;AC=510;AN=2184 GT:DS:GL:BD 0.23351648 0
1 78216594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7438;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78216698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5764;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78216708 . G GA 190 PASS INDEL;BAVGPOST=0.998;BRSQ=0.694;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7456;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78216828 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8764;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78216933 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8565;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78216975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4947;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78217006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78217007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8744;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78217177 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0311;AVGPOST=0.9958;RSQ=0.9479;ERATE=0.0004;THETA=0.0021;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 78217207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7873;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78217436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0409;AVGPOST=0.9901;RSQ=0.8980;ERATE=0.0010;THETA=0.0009;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 78217519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.4170;AVGPOST=0.9793;RSQ=0.9708;ERATE=0.0016;THETA=0.0008;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 78217575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0085;AVGPOST=0.9885;RSQ=0.4725;ERATE=0.0025;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78217668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.795;LDAF=0.0084;AVGPOST=0.9925;RSQ=0.6471;ERATE=0.0018;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78217706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9339;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78217847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0131;AVGPOST=0.9994;RSQ=0.9763;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78218001 . TTTA T 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7072;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78219049 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4951;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78219052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4593;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78219190 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4215;AVGPOST=0.9923;RSQ=0.9889;ERATE=0.0012;THETA=0.0006;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 78219335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.5972;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78219369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9879;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78219605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78219620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0044;AVGPOST=0.9974;RSQ=0.7734;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78219683 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.514;LDAF=0.0030;AVGPOST=0.9946;RSQ=0.2870;ERATE=0.0009;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78219718 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4936;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78219820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7530;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78219828 . CTG C 273 PASS INDEL;BAVGPOST=0.998;BRSQ=0.669;LDAF=0.0039;AVGPOST=0.9962;RSQ=0.6049;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78219880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78219965 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9624;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78219995 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9077;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78220290 . CA C 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5084;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78220390 . GA G 41 PASS INDEL;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0031;AVGPOST=0.9962;RSQ=0.5126;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78220418 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5842;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78220931 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4198;AVGPOST=0.9948;RSQ=0.9923;ERATE=0.0008;THETA=0.0008;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 78221191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5871;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78221311 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6125;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78221313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0030;AVGPOST=0.9957;RSQ=0.4661;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78221339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78221404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78221466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3294;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78221526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78221601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5719;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78221679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4209;AVGPOST=0.9937;RSQ=0.9913;ERATE=0.0010;THETA=0.0005;AC=923;AN=2184 GT:DS:GL:BD 0.42261904 0
1 78221730 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0086;AVGPOST=0.9984;RSQ=0.9353;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78221857 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0110;AVGPOST=0.9952;RSQ=0.8500;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78221894 . C CT 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6288;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78221934 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0093;AVGPOST=0.9986;RSQ=0.9420;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78222096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78222166 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9172;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78222612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9052;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78222635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8434;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78222958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0297;AVGPOST=0.9986;RSQ=0.9807;ERATE=0.0003;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 78222974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9998;RSQ=0.9930;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78223044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78223271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6292;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78223292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0062;AVGPOST=0.9970;RSQ=0.8291;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78223472 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9749;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78223483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6332;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78223669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7320;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78223670 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78223675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0047;AVGPOST=0.9985;RSQ=0.8649;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78223804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5981;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78224107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5446;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78224453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78224481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8736;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78224718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7074;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78224738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78224864 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7053;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78225022 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.856;LDAF=0.0087;AVGPOST=0.9960;RSQ=0.8449;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78225035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.454;LDAF=0.0037;AVGPOST=0.9957;RSQ=0.5510;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78225070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0058;AVGPOST=0.9974;RSQ=0.8564;ERATE=0.0003;THETA=0.0023;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78225120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0039;AVGPOST=0.9969;RSQ=0.7265;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78225428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.571;LDAF=0.0130;AVGPOST=0.9908;RSQ=0.7101;ERATE=0.0009;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78225485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0141;AVGPOST=0.9803;RSQ=0.4244;ERATE=0.0016;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78225636 . CG C 835 PASS INDEL;BAVGPOST=0.994;BRSQ=0.922;LDAF=0.0337;AVGPOST=0.9835;RSQ=0.7972;ERATE=0.0009;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 78225651 . GC G 2327 PASS INDEL;BAVGPOST=0.974;BRSQ=0.970;LDAF=0.1783;AVGPOST=0.9639;RSQ=0.9180;ERATE=0.0008;THETA=0.0006;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 78225652 rs34779725 CT C 14083 PASS INDEL;BAVGPOST=0.973;BRSQ=0.970;LDAF=0.1790;AVGPOST=0.9630;RSQ=0.9142;ERATE=0.0011;THETA=0.0007;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 78225658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4180;AVGPOST=0.9916;RSQ=0.9881;ERATE=0.0013;THETA=0.0004;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 78225880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3695;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0004;THETA=0.0006;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 78225918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5425;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78226005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9278;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78226105 . TA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5401;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78226290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6083;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78226378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6176;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78226415 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78226773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0511;AVGPOST=0.9977;RSQ=0.9828;ERATE=0.0003;THETA=0.0008;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78226980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.615;LDAF=0.0045;AVGPOST=0.9975;RSQ=0.7848;ERATE=0.0004;THETA=0.0023;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78227186 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.859;LDAF=0.0109;AVGPOST=0.9968;RSQ=0.8719;ERATE=0.0006;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78227235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78227236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.791;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6826;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78227290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5737;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78227323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9025;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78227342 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78227343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6149;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78227401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78227404 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9234;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78227514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7604;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78227630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78228039 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8303;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78228167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5036;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78228192 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.815;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9512;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78228253 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78228269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6398;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78228429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9558;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78228644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9297;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78228732 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6410;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78228907 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.543;LDAF=0.0158;AVGPOST=0.9842;RSQ=0.6339;ERATE=0.0053;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78228995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.968;LDAF=0.0765;AVGPOST=0.9929;RSQ=0.9630;ERATE=0.0006;THETA=0.0007;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 78229087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9748;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78229145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0149;AVGPOST=0.9979;RSQ=0.9444;ERATE=0.0005;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78229225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7181;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78229299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.7982;ERATE=0.0003;THETA=0.0021;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78229641 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78229650 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78229651 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7976;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78229717 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.6294;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78229773 . CCTCT C 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4700;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78229824 . A AT 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7843;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78229928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6765;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78229934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78229947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78230084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78230329 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78230341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78230369 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78230525 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78230763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6560;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78230858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78230886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=0.9988;RSQ=0.9804;ERATE=0.0004;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78230899 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0098;AVGPOST=0.9986;RSQ=0.9448;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78230960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0224;AVGPOST=0.9983;RSQ=0.9695;ERATE=0.0004;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78231094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78231222 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6736;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78231224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7604;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78231279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7707;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78231646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5817;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78231783 . T TA 53 PASS INDEL;BAVGPOST=0.998;BRSQ=0.551;LDAF=0.0043;AVGPOST=0.9952;RSQ=0.5774;ERATE=0.0011;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78231797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8248;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78231812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78231993 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8975;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78232025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0084;AVGPOST=0.9989;RSQ=0.9406;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78232217 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78232232 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9677;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78232290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7212;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78232337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5968;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78232407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0082;AVGPOST=0.9996;RSQ=0.9815;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78232425 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0615;AVGPOST=0.9994;RSQ=0.9946;ERATE=0.0003;THETA=0.0015;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 78232453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78232570 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.9030;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78232624 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.4234;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78232682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5980;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78232712 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78232769 . ATTCTC A 3188 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0134;AVGPOST=0.9988;RSQ=0.9593;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78232827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.8966;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78232846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78232872 . GT G 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6854;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78232903 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78232905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0028;AVGPOST=0.9964;RSQ=0.4817;ERATE=0.0013;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78232944 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6242;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78232984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.8206;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78233084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.7122;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78233116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9898;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78233201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7390;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78233352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6259;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78233407 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7362;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78233418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.2393;AVGPOST=0.9894;RSQ=0.9755;ERATE=0.0008;THETA=0.0005;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 78233460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.549;LDAF=0.0035;AVGPOST=0.9944;RSQ=0.3223;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78233499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3572;AVGPOST=0.9957;RSQ=0.9930;ERATE=0.0006;THETA=0.0006;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 78233694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3591;AVGPOST=0.9969;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 78233770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78233861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78233886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9658;ERATE=0.0003;THETA=0.0016;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78233915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0081;AVGPOST=0.9987;RSQ=0.9397;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78233998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78234017 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0134;AVGPOST=0.9995;RSQ=0.9879;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78234056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7541;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78234123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4739;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78234134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.809;LDAF=0.0156;AVGPOST=0.9970;RSQ=0.9169;ERATE=0.0006;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78234292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0612;AVGPOST=0.9996;RSQ=0.9965;ERATE=0.0003;THETA=0.0007;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 78234517 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0374;AVGPOST=0.9992;RSQ=0.9896;ERATE=0.0003;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 78234530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.5244;ERATE=0.0004;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78234628 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6942;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78234661 . AAATAAAAATAAAC A 1534 PASS INDEL;BAVGPOST=0.996;BRSQ=0.873;LDAF=0.0144;AVGPOST=0.9974;RSQ=0.9229;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78234739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78234748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78234757 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0506;AVGPOST=0.9994;RSQ=0.9944;ERATE=0.0003;THETA=0.0006;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78234928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.424;LDAF=0.0078;AVGPOST=0.9907;RSQ=0.5592;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78235053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5454;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78235191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4693;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78235267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7891;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78235305 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78235379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5617;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78235562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4158;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78235580 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5411;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78235644 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0069;AVGPOST=0.9922;RSQ=0.5698;ERATE=0.0009;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78235795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9113;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78235798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4292;ERATE=0.0006;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78235887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7503;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78236005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7823;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78236010 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7604;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78236108 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78236129 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9354;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78236211 . AG A 146 PASS INDEL;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7403;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78236317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78236421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6874;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78236434 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0021;AVGPOST=0.9997;RSQ=0.9551;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78236473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7970;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78236604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0127;AVGPOST=0.9974;RSQ=0.9217;ERATE=0.0006;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78236820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7403;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78236847 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0672;AVGPOST=0.9949;RSQ=0.9680;ERATE=0.0004;THETA=0.0004;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 78236891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.7280;AVGPOST=0.9842;RSQ=0.9681;ERATE=0.0007;THETA=0.0004;AC=1588;AN=2184 GT:DS:GL:BD 0.72710621 1
1 78236978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.739;LDAF=0.0149;AVGPOST=0.9919;RSQ=0.7969;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78236981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.944;LDAF=0.0365;AVGPOST=0.9803;RSQ=0.7922;ERATE=0.0016;THETA=0.0007;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 78237120 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.609;LDAF=0.0059;AVGPOST=0.9950;RSQ=0.6489;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78237125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0490;AVGPOST=0.9975;RSQ=0.9772;ERATE=0.0005;THETA=0.0007;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 78237208 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.939;LDAF=0.0613;AVGPOST=0.9957;RSQ=0.9706;ERATE=0.0006;THETA=0.0005;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 78237220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0163;AVGPOST=0.9960;RSQ=0.8990;ERATE=0.0007;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78237243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8124;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78237438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5195;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78237519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9896;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78237607 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.939;LDAF=0.0332;AVGPOST=0.9854;RSQ=0.8399;ERATE=0.0035;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78237695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9418;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78237768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7829;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78237920 rs111795766 A AT 8660 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0616;AVGPOST=0.9990;RSQ=0.9917;ERATE=0.0004;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 78237934 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78238223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0149;AVGPOST=0.9984;RSQ=0.9519;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78238348 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4397;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78238400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9189;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78238401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.9042;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78238441 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78238467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0238;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0003;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78238584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6971;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78238647 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.526;LDAF=0.0391;AVGPOST=0.9463;RSQ=0.4455;ERATE=0.0112;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78238675 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0096;AVGPOST=0.9977;RSQ=0.9085;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78238700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.5409;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78238861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7204;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78238896 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.853;LDAF=0.0243;AVGPOST=0.9989;RSQ=0.9804;ERATE=0.0003;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78239016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.779;LDAF=0.0235;AVGPOST=0.9872;RSQ=0.7987;ERATE=0.0010;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78239118 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6533;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78239166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0112;AVGPOST=0.9993;RSQ=0.9717;ERATE=0.0003;THETA=0.0021;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78239310 rs111401556 T TA 21624 PASS INDEL;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3679;AVGPOST=0.9888;RSQ=0.9832;ERATE=0.0018;THETA=0.0004;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 78239350 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0239;AVGPOST=0.9988;RSQ=0.9796;ERATE=0.0003;THETA=0.0009;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78239360 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9872;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78239445 . C CA 155 PASS INDEL;BAVGPOST=0.972;BRSQ=0.509;LDAF=0.0542;AVGPOST=0.9304;RSQ=0.4424;ERATE=0.0194;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 78239759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0392;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 78239760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8075;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78239784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78239804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78239978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9873;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78240001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78240056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78240078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7400;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78240107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9034;ERATE=0.0008;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78240117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4204;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 78240162 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78240165 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78240240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9875;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78240332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9117;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78240364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78240392 . C CG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78240504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78240595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8782;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78240596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78240635 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.747;LDAF=0.0347;AVGPOST=0.9792;RSQ=0.7659;ERATE=0.0202;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 78240696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78240801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0036;AVGPOST=0.9995;RSQ=0.9348;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78240862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5217;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78240964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4540;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78241205 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.735;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8103;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78241267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0092;AVGPOST=0.9979;RSQ=0.9116;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78241291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0119;AVGPOST=0.9980;RSQ=0.9237;ERATE=0.0003;THETA=0.0026;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78241401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7791;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78241840 rs71658578 GACAA G 22975 PASS INDEL;BAVGPOST=0.964;BRSQ=0.935;LDAF=0.3992;AVGPOST=0.9473;RSQ=0.9233;ERATE=0.0118;THETA=0.0003;AC=877;AN=2184 GT:DS:GL:BD 0.40155679 0
1 78242064 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78242179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0380;AVGPOST=0.9981;RSQ=0.9810;ERATE=0.0003;THETA=0.0006;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 78242213 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4979;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78242334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9989;RSQ=0.9613;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78242474 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0117;AVGPOST=0.9980;RSQ=0.9280;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78242497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.4728;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78242596 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6473;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78242607 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.2772;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78242638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2889;AVGPOST=0.9982;RSQ=0.9962;ERATE=0.0003;THETA=0.0007;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 78242640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6258;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78242701 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78242785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.7900;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78242837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4198;AVGPOST=0.9979;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 78242869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.850;LDAF=0.9958;AVGPOST=0.9992;RSQ=0.9400;ERATE=0.0003;THETA=0.0005;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 78243069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9990;RSQ=0.9745;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78243074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0109;AVGPOST=0.9989;RSQ=0.9575;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78243139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7908;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78243435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78243519 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0130;AVGPOST=0.9997;RSQ=0.9833;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78243547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4197;AVGPOST=0.9971;RSQ=0.9956;ERATE=0.0005;THETA=0.0005;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 78243550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0611;AVGPOST=0.9987;RSQ=0.9893;ERATE=0.0003;THETA=0.0012;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 78243726 . CATAA C 399 PASS INDEL;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0120;AVGPOST=0.9974;RSQ=0.9196;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78243727 . ATAAAT A 2253 PASS INDEL;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0120;AVGPOST=0.9978;RSQ=0.9337;ERATE=0.0003;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78243942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0130;AVGPOST=0.9987;RSQ=0.9656;ERATE=0.0007;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78244564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.730;LDAF=0.0163;AVGPOST=0.9904;RSQ=0.7789;ERATE=0.0009;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78244639 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78244749 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.6135;ERATE=0.0003;THETA=0.0054;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78244790 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6108;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78244809 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78244815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4979;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78244901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78245642 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.833;LDAF=0.0156;AVGPOST=0.9957;RSQ=0.8952;ERATE=0.0004;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78245842 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7930;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78246183 . C CG 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4976;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78246270 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0494;AVGPOST=0.9992;RSQ=0.9923;ERATE=0.0003;THETA=0.0007;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 78246376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7137;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78246411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0074;AVGPOST=0.9959;RSQ=0.7665;ERATE=0.0007;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78246461 . G GT 201 PASS INDEL;BAVGPOST=0.980;BRSQ=0.569;LDAF=0.0444;AVGPOST=0.9482;RSQ=0.5039;ERATE=0.0112;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 78246462 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6819;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78246489 . T TAATGATTAGG 462 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.6356;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78246536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6914;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78246539 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78246984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4487;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78247508 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78247576 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0180;AVGPOST=0.9993;RSQ=0.9825;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 78247605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7133;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78247613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78247843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6809;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78248284 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78248352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7597;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78248438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8277;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78248581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8671;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78248724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7438;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78248953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78249060 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78249316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5443;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78249526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7255;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78249576 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78249593 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0260;AVGPOST=0.9995;RSQ=0.9929;ERATE=0.0003;THETA=0.0017;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 78249635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78249751 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0087;AVGPOST=0.9996;RSQ=0.9813;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78249766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0636;AVGPOST=0.9975;RSQ=0.9831;ERATE=0.0003;THETA=0.0006;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 78249992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0094;AVGPOST=0.9981;RSQ=0.9100;ERATE=0.0005;THETA=0.0015;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78250013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5176;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78250352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78250451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.959;LDAF=0.0636;AVGPOST=0.9985;RSQ=0.9892;ERATE=0.0003;THETA=0.0002;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 78250458 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0348;AVGPOST=0.9995;RSQ=0.9938;ERATE=0.0003;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 78250528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0267;AVGPOST=0.9996;RSQ=0.9942;ERATE=0.0003;THETA=0.0014;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78250549 . C CA 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78250696 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.398;LDAF=0.0037;AVGPOST=0.9952;RSQ=0.4708;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78250701 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5284;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78250758 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8553;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78250921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0346;AVGPOST=0.9995;RSQ=0.9931;ERATE=0.0003;THETA=0.0007;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 78250923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0139;AVGPOST=0.9987;RSQ=0.9655;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78250954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.885;LDAF=0.0213;AVGPOST=0.9962;RSQ=0.9230;ERATE=0.0005;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78251121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4022;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78251175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.565;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4945;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78251191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6412;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78251323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0106;AVGPOST=0.9995;RSQ=0.9750;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78251330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.690;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.7156;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78251384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6359;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78251422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78251468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9916;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78251562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6011;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78251626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9584;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78251769 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8704;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78251924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0210;AVGPOST=0.9944;RSQ=0.8939;ERATE=0.0005;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78252326 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6389;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78252548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5653;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78252581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8264;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78252673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78252723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5783;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78252724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6317;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78252836 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0506;AVGPOST=0.9979;RSQ=0.9854;ERATE=0.0003;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 78252839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.848;LDAF=0.0141;AVGPOST=0.9925;RSQ=0.8094;ERATE=0.0012;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78252879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5886;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78252890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78253025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78253032 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0120;AVGPOST=0.9987;RSQ=0.9542;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78253034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78253157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.524;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5720;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78253212 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8263;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78253231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.4043;AVGPOST=0.9710;RSQ=0.9583;ERATE=0.0039;THETA=0.0004;AC=878;AN=2184 GT:DS:GL:BD 0.40201464 0
1 78253275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9978;RSQ=0.7632;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78253310 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0024;AVGPOST=0.9967;RSQ=0.4029;ERATE=0.0008;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78253321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4928;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78253326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7707;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78253361 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4295;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78253407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8740;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78253541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0136;AVGPOST=0.9992;RSQ=0.9722;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78253601 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0037;AVGPOST=0.9951;RSQ=0.4189;ERATE=0.0013;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78253741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0766;AVGPOST=0.9957;RSQ=0.9763;ERATE=0.0003;THETA=0.0013;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 78253831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0368;AVGPOST=0.9983;RSQ=0.9780;ERATE=0.0003;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 78253918 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9369;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78253919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.635;LDAF=0.0046;AVGPOST=0.9953;RSQ=0.6248;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78254089 . C CG 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5482;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78254112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0030;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78254150 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4593;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78254258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2273;AVGPOST=0.9982;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 78254293 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5824;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78254294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0192;AVGPOST=0.9984;RSQ=0.9675;ERATE=0.0004;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78254296 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6092;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78254299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.5944;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78254326 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0760;AVGPOST=0.9990;RSQ=0.9942;ERATE=0.0003;THETA=0.0007;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 78254485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6244;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78254571 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78254664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6856;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78254680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8249;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78254780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78254788 . ATATT A 60 PASS INDEL;BAVGPOST=0.979;BRSQ=0.040;LDAF=0.0578;AVGPOST=0.9366;RSQ=0.5650;ERATE=0.0031;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 78254790 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4855;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78254935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8263;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78254949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0153;AVGPOST=0.9979;RSQ=0.9467;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78254968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5855;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78255021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9806;ERATE=0.0004;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78255068 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0232;AVGPOST=0.9981;RSQ=0.9631;ERATE=0.0004;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78255229 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0166;AVGPOST=0.9986;RSQ=0.9638;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78255247 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6253;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78255266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78255301 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6011;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78255476 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78255557 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9203;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78255822 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0671;AVGPOST=0.9989;RSQ=0.9909;ERATE=0.0003;THETA=0.0005;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 78255859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0693;AVGPOST=0.9976;RSQ=0.9842;ERATE=0.0004;THETA=0.0004;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 78255882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0348;AVGPOST=0.9993;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 78256012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8237;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78256100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5675;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78256151 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.824;LDAF=0.0147;AVGPOST=0.9945;RSQ=0.8416;ERATE=0.0008;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78256194 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0057;AVGPOST=0.9968;RSQ=0.7710;ERATE=0.0005;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78256197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0047;AVGPOST=0.9963;RSQ=0.6845;ERATE=0.0006;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78256235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.4422;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78256238 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.980;LDAF=0.0654;AVGPOST=0.9983;RSQ=0.9875;ERATE=0.0003;THETA=0.0005;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 78256246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.722;LDAF=0.0043;AVGPOST=0.9972;RSQ=0.7339;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78256407 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0347;AVGPOST=0.9992;RSQ=0.9903;ERATE=0.0004;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 78256433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4217;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78256746 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78256797 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78256944 . A AC 999 PASS INDEL;BAVGPOST=0.992;BRSQ=0.830;LDAF=0.0285;AVGPOST=0.9815;RSQ=0.7662;ERATE=0.0016;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78257104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3436;AVGPOST=0.9960;RSQ=0.9935;ERATE=0.0003;THETA=0.0003;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 78257130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78257190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0148;AVGPOST=0.9975;RSQ=0.9313;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78257526 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9992;RSQ=0.9701;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78257582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5400;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78257591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5205;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78257789 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9751;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78257957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8144;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78258036 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78258326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8888;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78258634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0667;AVGPOST=0.9980;RSQ=0.9858;ERATE=0.0004;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 78258668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.632;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5739;ERATE=0.0006;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78259081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78259125 . TTTTG T 29 PASS INDEL;BAVGPOST=0.999;BRSQ=0.584;LDAF=0.0029;AVGPOST=0.9956;RSQ=0.4309;ERATE=0.0008;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78259131 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0258;AVGPOST=0.9993;RSQ=0.9870;ERATE=0.0004;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78259181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78259311 . A AT 277 PASS INDEL;BAVGPOST=0.917;BRSQ=0.399;LDAF=0.1324;AVGPOST=0.8415;RSQ=0.4431;ERATE=0.0191;THETA=0.0005;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 78259392 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0052;AVGPOST=0.9976;RSQ=0.7972;ERATE=0.0007;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78259418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0023;AVGPOST=0.9964;RSQ=0.3349;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78259429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0162;AVGPOST=0.9982;RSQ=0.9502;ERATE=0.0004;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78259448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7632;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78259692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78259716 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0140;AVGPOST=0.9963;RSQ=0.8899;ERATE=0.0004;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78259721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.967;LDAF=0.2356;AVGPOST=0.9614;RSQ=0.9145;ERATE=0.0038;THETA=0.0009;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 78259756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.762;LDAF=0.0287;AVGPOST=0.9888;RSQ=0.8398;ERATE=0.0005;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 78259791 . A AG 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5136;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78259797 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8914;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78259845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9361;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78259996 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0265;AVGPOST=0.9985;RSQ=0.9790;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 78260215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78260271 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9213;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78260334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9794;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78260472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7849;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78260649 . G GT 16 PASS INDEL;BAVGPOST=0.998;BRSQ=0.655;LDAF=0.0045;AVGPOST=0.9951;RSQ=0.5510;ERATE=0.0013;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78260853 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0372;AVGPOST=0.9979;RSQ=0.9737;ERATE=0.0003;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 78261039 . C CT 236 PASS INDEL;BAVGPOST=0.962;BRSQ=0.540;LDAF=0.0773;AVGPOST=0.9133;RSQ=0.4912;ERATE=0.0254;THETA=0.0006;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 78261234 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78261419 . A AT 135 PASS INDEL;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4449;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78261662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78261685 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78261725 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5920;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78261791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7199;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78261825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2811;AVGPOST=0.9895;RSQ=0.9787;ERATE=0.0011;THETA=0.0008;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 78262038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.551;LDAF=0.0107;AVGPOST=0.9861;RSQ=0.4677;ERATE=0.0020;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78262192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6598;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78262421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6211;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78262493 . A AT 40 PASS INDEL;BAVGPOST=0.998;BRSQ=0.524;LDAF=0.0032;AVGPOST=0.9968;RSQ=0.6233;ERATE=0.0009;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78262591 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.5241;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78262623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0059;AVGPOST=0.9980;RSQ=0.8596;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78262732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0346;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0003;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 78262884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6787;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78263058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7185;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78263185 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0353;AVGPOST=0.9982;RSQ=0.9777;ERATE=0.0006;THETA=0.0010;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 78263220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7221;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78263418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6207;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78263435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7173;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78263480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0052;AVGPOST=0.9974;RSQ=0.7744;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78263574 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9175;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78263702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78263753 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9723;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78264039 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78264140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5056;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78264256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9548;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78264259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1009;AVGPOST=0.9982;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 78264267 . C CG 150 PASS INDEL;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.7889;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78264277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9559;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78264549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78264559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5021;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78264565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5834;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78264887 . T TC 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6083;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78265160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4802;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78265186 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4737;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78265317 . TC T 153 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5200;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78265350 . G GT 107 PASS INDEL;BAVGPOST=0.980;BRSQ=0.546;LDAF=0.0385;AVGPOST=0.9511;RSQ=0.4801;ERATE=0.0137;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78265391 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0115;AVGPOST=0.9973;RSQ=0.9125;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78265766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6151;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78265947 . G GCA 135 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.6751;ERATE=0.0008;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78266108 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0496;AVGPOST=0.9994;RSQ=0.9938;ERATE=0.0004;THETA=0.0006;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 78266183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78266375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0010;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78266417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4065;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=889;AN=2184 GT:DS:GL:BD 0.40705130 0
1 78266430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78266449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5358;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78266489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78266491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78266529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78266664 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7766;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78266974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78267035 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78267157 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78267241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78267375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78267428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0209;AVGPOST=0.9979;RSQ=0.9561;ERATE=0.0004;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78267691 . T TG 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78267705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8234;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78267780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0357;AVGPOST=0.9989;RSQ=0.9889;ERATE=0.0003;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 78267785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8838;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78267789 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78268042 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78268048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0394;AVGPOST=0.9987;RSQ=0.9886;ERATE=0.0003;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 78268112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5785;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78268131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8602;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78268146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78268258 . A AG 79 PASS INDEL;BAVGPOST=0.996;BRSQ=0.810;LDAF=0.0124;AVGPOST=0.9910;RSQ=0.7044;ERATE=0.0048;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78268415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0094;AVGPOST=0.9969;RSQ=0.8798;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78268427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78268565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78268606 . CT C 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5565;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78268762 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8458;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78268923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78269053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78269207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2802;AVGPOST=0.9963;RSQ=0.9931;ERATE=0.0005;THETA=0.0005;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 78269302 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=0.9979;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78269321 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78269514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.8338;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78269549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78269613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4979;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78269734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78269750 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0268;AVGPOST=0.9975;RSQ=0.9618;ERATE=0.0005;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78269782 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8228;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78269786 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6359;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78269808 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78269832 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78270044 . T TA 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4979;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78270069 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7980;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78270358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5309;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78270516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7696;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78270543 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0076;AVGPOST=0.9929;RSQ=0.6601;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78270636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78270649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3926;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78270703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.844;LDAF=0.1764;AVGPOST=0.9617;RSQ=0.9126;ERATE=0.0005;THETA=0.0005;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 78270749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.5801;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78270802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.517;LDAF=0.0026;AVGPOST=0.9970;RSQ=0.5196;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78270828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0226;AVGPOST=0.9926;RSQ=0.8613;ERATE=0.0009;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78270841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.478;LDAF=0.0068;AVGPOST=0.9901;RSQ=0.4225;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78270944 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.957;LDAF=0.6206;AVGPOST=0.9279;RSQ=0.8889;ERATE=0.0083;THETA=0.0004;AC=1383;AN=2184 GT:DS:GL:BD 0.63324177 1
1 78271010 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0031;AVGPOST=0.9959;RSQ=0.5229;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78271045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.4171;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78271127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0030;AVGPOST=0.9980;RSQ=0.7560;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78271221 . C CT 326 PASS INDEL;BAVGPOST=0.955;BRSQ=0.469;LDAF=0.0887;AVGPOST=0.8937;RSQ=0.4671;ERATE=0.0199;THETA=0.0003;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 78271278 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0075;AVGPOST=0.9983;RSQ=0.8994;ERATE=0.0005;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78271318 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6566;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78271381 . AT A 58 PASS INDEL;BAVGPOST=0.999;BRSQ=0.516;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3794;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78271427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4552;ERATE=0.0004;THETA=0.0055;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78271470 . G GT 351 PASS INDEL;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7735;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78271510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0510;AVGPOST=0.9993;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78271666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.8928;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78271810 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6898;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78271899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78271924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0037;AVGPOST=0.9970;RSQ=0.7179;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78272057 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.8074;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78272079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78272317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1030;AVGPOST=0.9984;RSQ=0.9921;ERATE=0.0004;THETA=0.0003;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 78272449 . CTCT C 923 PASS INDEL;BAVGPOST=0.996;BRSQ=0.805;LDAF=0.0089;AVGPOST=0.9955;RSQ=0.8155;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78272538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78272623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78272643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78272689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78272764 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78272798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78272902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6447;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=1408;AN=2184 GT:DS:GL:BD 0.64468867 1
1 78272907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78272921 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9165;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78272992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.916;LDAF=0.0228;AVGPOST=0.9955;RSQ=0.9248;ERATE=0.0005;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78273018 . T TA 25 PASS INDEL;BAVGPOST=0.999;BRSQ=0.503;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.2899;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78273125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0152;AVGPOST=0.9983;RSQ=0.9581;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78273191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7661;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78273222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.8301;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78273249 . TGTTA T 2866 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78273470 . A AT 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78273559 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0094;AVGPOST=0.9988;RSQ=0.9498;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78273784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7828;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78273817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.940;LDAF=0.1903;AVGPOST=0.9552;RSQ=0.8864;ERATE=0.0086;THETA=0.0003;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 78274260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78274282 . TGAA T 187 PASS INDEL;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4455;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78274285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5669;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78274412 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78274527 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6111;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78274590 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8840;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78274735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.800;LDAF=0.0159;AVGPOST=0.9964;RSQ=0.9100;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78274777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78274883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6457;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78274886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5471;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78275302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.965;LDAF=0.5850;AVGPOST=0.9778;RSQ=0.9668;ERATE=0.0065;THETA=0.0003;AC=1281;AN=2184 GT:DS:GL:BD 0.58653843 1
1 78275478 . G GC 262 PASS INDEL;BAVGPOST=0.998;BRSQ=0.637;LDAF=0.0048;AVGPOST=0.9958;RSQ=0.6476;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78275665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.5601;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78276141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5592;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78276696 . AC A 1286 PASS INDEL;BAVGPOST=0.991;BRSQ=0.681;LDAF=0.0201;AVGPOST=0.9921;RSQ=0.8456;ERATE=0.0006;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78276977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.2542;AVGPOST=0.9968;RSQ=0.9927;ERATE=0.0004;THETA=0.0013;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 78277055 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0032;AVGPOST=0.9964;RSQ=0.5623;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78277151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6862;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78277249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0108;AVGPOST=0.9981;RSQ=0.9296;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78277264 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5655;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78277288 . TTTTG T 173 PASS INDEL;BAVGPOST=0.998;BRSQ=0.786;LDAF=0.0107;AVGPOST=0.9887;RSQ=0.5628;ERATE=0.0030;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78277292 . GTTC G 57 PASS INDEL;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7636;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78277367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.874;LDAF=0.0165;AVGPOST=0.9953;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78277380 . CA C 382 PASS INDEL;BAVGPOST=0.996;BRSQ=0.812;LDAF=0.0111;AVGPOST=0.9973;RSQ=0.8910;ERATE=0.0007;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78277383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6780;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78277436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0120;AVGPOST=0.9959;RSQ=0.8668;ERATE=0.0005;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78277470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.648;LDAF=0.0132;AVGPOST=0.9862;RSQ=0.6220;ERATE=0.0004;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78277524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.491;LDAF=0.0164;AVGPOST=0.9827;RSQ=0.5756;ERATE=0.0013;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78277595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.9907;AVGPOST=0.9941;RSQ=0.7478;ERATE=0.0007;THETA=0.0005;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 78277635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6940;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78277857 . T TA 405 PASS INDEL;BAVGPOST=0.997;BRSQ=0.861;LDAF=0.0087;AVGPOST=0.9954;RSQ=0.7861;ERATE=0.0009;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0