1092
10000
1 89826806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89826851 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0664;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 89826986 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2891;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 89827034 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6019;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89827052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0320;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 89827317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5924;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89827479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89827524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.681;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6774;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89827559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89827589 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89827650 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89827661 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2714;AVGPOST=0.9976;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 89827696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6938;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89827816 . AG A 4648 PASS INDEL;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0232;AVGPOST=0.9979;RSQ=0.9613;ERATE=0.0005;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 89827817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89827894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5166;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89827987 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0106;AVGPOST=0.9994;RSQ=0.9732;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 89827997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8283;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89828009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5509;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89828010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89828115 rs72402692 C CT 731 PASS INDEL;BAVGPOST=0.988;BRSQ=0.743;LDAF=0.0365;AVGPOST=0.9681;RSQ=0.6507;ERATE=0.0065;THETA=0.0008;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 89828119 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6589;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89828138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8487;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89828146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.629;LDAF=0.0040;AVGPOST=0.9952;RSQ=0.5089;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89828159 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.968;LDAF=0.2866;AVGPOST=0.9803;RSQ=0.9668;ERATE=0.0012;THETA=0.0004;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 89828255 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0045;AVGPOST=0.9968;RSQ=0.7268;ERATE=0.0007;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89828302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.944;LDAF=0.0091;AVGPOST=0.9961;RSQ=0.8248;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 89828353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.794;LDAF=0.0119;AVGPOST=0.9937;RSQ=0.7937;ERATE=0.0004;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 89828401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0137;AVGPOST=0.9988;RSQ=0.9615;ERATE=0.0004;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 89828406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1598;AVGPOST=0.9973;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 89828502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0320;AVGPOST=0.9997;RSQ=0.9960;ERATE=0.0003;THETA=0.0006;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 89828550 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5591;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89828551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8607;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 89828663 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6997;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89828666 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89828716 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8616;AVGPOST=0.9970;RSQ=0.9907;ERATE=0.0004;THETA=0.0004;AC=1885;AN=2184 GT:DS:GL:BD 0.86309522 1
1 89828758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9755;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89828760 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89828864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0632;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 89828989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89829099 . TTC T 13 PASS INDEL;BAVGPOST=0.979;BRSQ=0.186;LDAF=0.1061;AVGPOST=0.8519;RSQ=0.4108;ERATE=0.0081;THETA=0.0005;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 89829186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89829215 . T TAA 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8274;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89829364 . TG T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6115;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89829425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89829513 . AT A 228 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8348;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89829519 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89829844 . TC T 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6907;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89829846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0036;AVGPOST=0.9955;RSQ=0.5378;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89829866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.672;LDAF=0.0042;AVGPOST=0.9949;RSQ=0.5268;ERATE=0.0008;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89829872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2865;AVGPOST=0.9928;RSQ=0.9867;ERATE=0.0007;THETA=0.0006;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 89829877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0050;AVGPOST=0.9973;RSQ=0.7874;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89830026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7092;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89830271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0680;AVGPOST=0.9951;RSQ=0.9708;ERATE=0.0005;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 89830317 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0159;AVGPOST=0.9983;RSQ=0.9512;ERATE=0.0005;THETA=0.0047;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 89830574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0218;AVGPOST=0.9764;RSQ=0.5621;ERATE=0.0016;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 89830709 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0632;AVGPOST=0.9988;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 89830720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0036;AVGPOST=0.9972;RSQ=0.7129;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89831057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89831058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89831115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89831179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89831302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9352;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89831449 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 89831527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89831707 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0340;AVGPOST=0.9990;RSQ=0.9885;ERATE=0.0003;THETA=0.0009;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 89831712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5758;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89831751 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.976;LDAF=0.7845;AVGPOST=0.9809;RSQ=0.9601;ERATE=0.0038;THETA=0.0059;AC=1723;AN=2184 GT:DS:GL:BD 0.78891939 1
1 89831821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9724;ERATE=0.0003;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 89831856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8801;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89831882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89831978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9659;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 89832008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0131;AVGPOST=0.9989;RSQ=0.9677;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 89832089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0346;AVGPOST=0.9987;RSQ=0.9843;ERATE=0.0004;THETA=0.0005;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 89832097 . AT A 111 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89832178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89832209 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9352;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89832227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5471;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89832304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8597;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89832305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89832393 . TC T 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8667;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89832464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3096;AVGPOST=0.9936;RSQ=0.9894;ERATE=0.0005;THETA=0.0005;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 89832728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89832737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89832822 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89832948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1571;AVGPOST=0.9959;RSQ=0.9895;ERATE=0.0004;THETA=0.0004;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 89832984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8336;ERATE=0.0006;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89832994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6910;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89833035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0822;AVGPOST=0.9957;RSQ=0.9801;ERATE=0.0003;THETA=0.0006;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 89833083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0097;AVGPOST=0.9992;RSQ=0.9603;ERATE=0.0004;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 89833181 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8601;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89833325 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.645;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7704;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89833447 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89833596 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0217;AVGPOST=0.9986;RSQ=0.9783;ERATE=0.0004;THETA=0.0082;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 89833683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6096;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89833911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9648;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89833933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9489;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=2072;AN=2184 GT:DS:GL:BD 0.94871795 1
1 89833990 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89834085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0060;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89834140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89834223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89834237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89834252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89834253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89834257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89834332 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89834454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9709;ERATE=0.0003;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89834500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0044;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89834502 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0037;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89834657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7209;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89834658 . C CT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89834766 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89834832 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8844;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89834875 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0708;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 89834907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9430;ERATE=0.0014;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89834920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=0.9920;ERATE=0.0003;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89834944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=0.9920;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89834959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9842;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 89834975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 89835057 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89835071 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9804;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89835123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9271;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89835209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 89835220 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 89835256 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 89835273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89835281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9475;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89835301 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89835401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0160;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 89835511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8990;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89835617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7441;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89835691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0056;AVGPOST=0.9983;RSQ=0.8945;ERATE=0.0008;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89835756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9657;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89835904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.7123;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89835923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7533;ERATE=0.0003;THETA=0.0047;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89835926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4401;AVGPOST=0.9941;RSQ=0.9909;ERATE=0.0004;THETA=0.0004;AC=963;AN=2184 GT:DS:GL:BD 0.44093406 0
1 89835934 . AG A 21 PASS INDEL;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0021;AVGPOST=0.9972;RSQ=0.4743;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89836078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0073;AVGPOST=0.9995;RSQ=0.9719;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89836128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8790;AVGPOST=0.9965;RSQ=0.9857;ERATE=0.0005;THETA=0.0003;AC=1922;AN=2184 GT:DS:GL:BD 0.88003665 1
1 89836196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1739;AVGPOST=0.9944;RSQ=0.9840;ERATE=0.0005;THETA=0.0002;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 89836210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9788;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 89836226 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.832;LDAF=0.0123;AVGPOST=0.9934;RSQ=0.8035;ERATE=0.0004;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 89836333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7531;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89836358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5589;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89836363 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89836428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1261;AVGPOST=0.9976;RSQ=0.9915;ERATE=0.0004;THETA=0.0008;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 89836438 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89836505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89836513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89836557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0227;AVGPOST=0.9963;RSQ=0.9372;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 89836560 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6562;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89836587 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 89836624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0303;AVGPOST=0.9979;RSQ=0.9690;ERATE=0.0003;THETA=0.0006;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 89836694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6763;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89836699 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0331;AVGPOST=0.9995;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 89836754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89836756 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89836762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5545;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89836768 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7118;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89836845 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3866;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89836879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.6660;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89837068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89837109 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1262;AVGPOST=0.9984;RSQ=0.9941;ERATE=0.0005;THETA=0.0010;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 89837201 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5592;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89837219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9662;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89837221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.524;LDAF=0.0198;AVGPOST=0.9795;RSQ=0.5761;ERATE=0.0053;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 89837350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.956;LDAF=0.1249;AVGPOST=0.9823;RSQ=0.9400;ERATE=0.0008;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 89837439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5758;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89837477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.4554;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89837591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1367;AVGPOST=0.9928;RSQ=0.9759;ERATE=0.0006;THETA=0.0011;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 89837738 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89837855 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.906;BRSQ=0.607;LDAF=0.8645;AVGPOST=0.8882;RSQ=0.6599;ERATE=0.0118;THETA=0.0007;AC=1965;AN=2184 GT:DS:GL:BD 0.89972526 1
1 89837918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89837973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4785;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89838052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5434;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89838138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.935;LDAF=0.5886;AVGPOST=0.9633;RSQ=0.9410;ERATE=0.0027;THETA=0.0005;AC=1297;AN=2184 GT:DS:GL:BD 0.59386444 1
1 89838358 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.904;LDAF=0.1767;AVGPOST=0.9735;RSQ=0.9301;ERATE=0.0020;THETA=0.0003;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 89838426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.878;LDAF=0.0150;AVGPOST=0.9960;RSQ=0.8949;ERATE=0.0006;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 89838507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.609;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5593;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89838564 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0082;AVGPOST=0.9974;RSQ=0.8846;ERATE=0.0004;THETA=0.0041;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89838624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.897;LDAF=0.3335;AVGPOST=0.9562;RSQ=0.9306;ERATE=0.0041;THETA=0.0032;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 89838766 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0035;AVGPOST=0.9953;RSQ=0.4795;ERATE=0.0009;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89838819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.438;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5587;ERATE=0.0004;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89838824 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0072;AVGPOST=0.9928;RSQ=0.6386;ERATE=0.0005;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89838924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0356;AVGPOST=0.9987;RSQ=0.9842;ERATE=0.0004;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 89838937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0034;AVGPOST=0.9982;RSQ=0.7704;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89838951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6536;ERATE=0.0005;THETA=0.0056;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89839116 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.521;LDAF=0.0030;AVGPOST=0.9957;RSQ=0.3783;ERATE=0.0007;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89839191 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.4463;ERATE=0.0006;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89839202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.666;LDAF=0.0047;AVGPOST=0.9960;RSQ=0.6571;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89839218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5938;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89839223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5693;ERATE=0.0003;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89839279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.735;LDAF=0.0262;AVGPOST=0.9902;RSQ=0.8585;ERATE=0.0004;THETA=0.0021;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 89839297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0039;AVGPOST=0.9956;RSQ=0.5400;ERATE=0.0008;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89839473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89839540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0064;AVGPOST=0.9979;RSQ=0.8603;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89839557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9980;RSQ=0.2128;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 89839588 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0333;AVGPOST=0.9967;RSQ=0.9650;ERATE=0.0004;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 89839614 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0318;AVGPOST=0.9989;RSQ=0.9851;ERATE=0.0004;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 89839756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89839757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.571;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89839944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7964;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89839953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4053;ERATE=0.0006;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89840005 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89840139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8142;ERATE=0.0004;THETA=0.0048;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89840140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5541;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89840161 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5165;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89840175 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89840187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.871;LDAF=0.0104;AVGPOST=0.9966;RSQ=0.8867;ERATE=0.0004;THETA=0.0064;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 89840340 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.982;LDAF=0.6309;AVGPOST=0.9886;RSQ=0.9812;ERATE=0.0011;THETA=0.0023;AC=1381;AN=2184 GT:DS:GL:BD 0.63232601 1
1 89840342 . A AGC 282 PASS INDEL;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7176;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89840389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.975;LDAF=0.3938;AVGPOST=0.9817;RSQ=0.9712;ERATE=0.0036;THETA=0.0021;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 89840493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1307;AVGPOST=0.9954;RSQ=0.9867;ERATE=0.0004;THETA=0.0066;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 89840606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5364;ERATE=0.0003;THETA=0.0077;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89840613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6599;ERATE=0.0004;THETA=0.0053;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89840623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8395;AVGPOST=0.9969;RSQ=0.9900;ERATE=0.0004;THETA=0.0004;AC=1835;AN=2184 GT:DS:GL:BD 0.84020144 1
1 89840662 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.824;LDAF=0.0082;AVGPOST=0.9982;RSQ=0.9053;ERATE=0.0003;THETA=0.0013;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 89840823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0125;AVGPOST=0.9995;RSQ=0.9833;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89840832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.6041;AVGPOST=0.9921;RSQ=0.9879;ERATE=0.0005;THETA=0.0004;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 89840835 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89840939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5855;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89840942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0005;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89841071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.7947;AVGPOST=0.9918;RSQ=0.9809;ERATE=0.0010;THETA=0.0032;AC=1735;AN=2184 GT:DS:GL:BD 0.79441392 1
1 89841083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4998;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89841084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0048;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89841096 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7895;AVGPOST=0.9963;RSQ=0.9911;ERATE=0.0007;THETA=0.0009;AC=1725;AN=2184 GT:DS:GL:BD 0.78983516 1
1 89841163 . T TC 171 PASS INDEL;BAVGPOST=0.919;BRSQ=0.309;LDAF=0.0764;AVGPOST=0.9027;RSQ=0.4939;ERATE=0.0071;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 89841214 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7892;AVGPOST=0.9983;RSQ=0.9956;ERATE=0.0006;THETA=0.0070;AC=1724;AN=2184 GT:DS:GL:BD 0.78937727 1
1 89841225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9127;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 89841257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5809;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89841277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89841283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7886;AVGPOST=0.9987;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=1723;AN=2184 GT:DS:GL:BD 0.78891939 1
1 89841319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0713;AVGPOST=0.9988;RSQ=0.9933;ERATE=0.0004;THETA=0.0005;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 89841354 . G GT 400 PASS INDEL;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0048;AVGPOST=0.9981;RSQ=0.8707;ERATE=0.0003;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89841404 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89841440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9328;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89841476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1546;AVGPOST=0.9963;RSQ=0.9894;ERATE=0.0004;THETA=0.0004;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 89841484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89841501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9748;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89841506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9997;RSQ=0.9895;ERATE=0.0003;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89841629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7892;AVGPOST=0.9981;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=1725;AN=2184 GT:DS:GL:BD 0.78983516 1
1 89841640 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7897;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=1725;AN=2184 GT:DS:GL:BD 0.78983516 1
1 89841700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89841705 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89841713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0096;AVGPOST=0.9984;RSQ=0.9343;ERATE=0.0004;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 89841966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.484;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7953;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89841997 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89842042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7879;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=1722;AN=2184 GT:DS:GL:BD 0.78846157 1
1 89842075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0724;AVGPOST=0.9987;RSQ=0.9924;ERATE=0.0004;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 89842113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.7871;AVGPOST=0.9972;RSQ=0.9931;ERATE=0.0008;THETA=0.0005;AC=1721;AN=2184 GT:DS:GL:BD 0.78800368 1
1 89842178 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0154;AVGPOST=0.9958;RSQ=0.8965;ERATE=0.0006;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 89842333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.684;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4689;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89842341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8067;ERATE=0.0004;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89842454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.7114;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89842459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7874;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0005;THETA=0.0005;AC=1721;AN=2184 GT:DS:GL:BD 0.78800368 1
1 89842498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8742;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89842503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7700;ERATE=0.0004;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89842509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7317;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89842617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5298;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89842675 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9411;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89842695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.1155;AVGPOST=0.9959;RSQ=0.9855;ERATE=0.0003;THETA=0.0003;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 89842762 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89842994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7872;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0005;THETA=0.0003;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 89843028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89843113 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4872;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89843153 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7873;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0003;THETA=0.0006;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 89843176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89843222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89843250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6802;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89843420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89843603 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89843663 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89843879 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 89844033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89844035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1193;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0003;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 89844088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89844089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89844154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89844240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89844288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89844289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89844447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9719;ERATE=0.0003;THETA=0.0015;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89844520 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89844595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0375;AVGPOST=0.9985;RSQ=0.9826;ERATE=0.0004;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 89844674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.817;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9095;ERATE=0.0004;THETA=0.0027;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89844684 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89844752 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.3189;AVGPOST=0.9948;RSQ=0.9900;ERATE=0.0006;THETA=0.0006;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 89844944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.797;LDAF=0.0058;AVGPOST=0.9958;RSQ=0.7593;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89845079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0121;AVGPOST=0.9992;RSQ=0.9744;ERATE=0.0003;THETA=0.0050;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89845126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.2518;AVGPOST=0.9938;RSQ=0.9878;ERATE=0.0007;THETA=0.0005;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 89845275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7915;AVGPOST=0.9976;RSQ=0.9941;ERATE=0.0006;THETA=0.0003;AC=1730;AN=2184 GT:DS:GL:BD 0.79212457 1
1 89845351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6765;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89845362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0711;AVGPOST=0.9991;RSQ=0.9942;ERATE=0.0004;THETA=0.0006;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 89845427 . T TG 345 PASS INDEL;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8809;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89845436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89845476 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1199;AVGPOST=0.9990;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 89845517 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89845525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8651;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89845569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89845594 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89845718 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8373;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89845770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9827;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89845771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89845865 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89845929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89845935 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0333;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 89845974 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89845985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89845996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89846031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89846152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0544;AVGPOST=0.9993;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 89846291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0813;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 89846355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89846388 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0087;AVGPOST=0.9994;RSQ=0.9720;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89846390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7870;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89846406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0126;AVGPOST=0.9993;RSQ=0.9782;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 89846438 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89846472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5332;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89846616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9285;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89846634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89846660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.6403;ERATE=0.0006;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89846820 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.974;LDAF=0.0818;AVGPOST=0.9988;RSQ=0.9922;ERATE=0.0005;THETA=0.0002;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 89846825 . C CA 1606 PASS INDEL;BAVGPOST=0.577;BRSQ=0.204;LDAF=0.4101;AVGPOST=0.6420;RSQ=0.3226;ERATE=0.0546;THETA=0.0003;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 89846924 . TA T 196 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6542;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89846937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 89847051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9643;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 89847153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1499;AVGPOST=0.9973;RSQ=0.9925;ERATE=0.0003;THETA=0.0008;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 89847156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89847261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 89847279 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89847286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89847305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89847339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 89847372 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7920;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1730;AN=2184 GT:DS:GL:BD 0.79212457 1
1 89847411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7920;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1730;AN=2184 GT:DS:GL:BD 0.79212457 1
1 89847425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9452;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89847444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7915;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0006;AC=1729;AN=2184 GT:DS:GL:BD 0.79166669 1
1 89847445 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0017;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89847497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89847531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89847539 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89847545 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89847562 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89847773 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89847990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0708;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 89848006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0818;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0006;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 89848016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89848039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89848200 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89848293 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89848345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=0.9920;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89848352 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89848388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 89848434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89848455 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89848557 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.7920;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0080;AC=1730;AN=2184 GT:DS:GL:BD 0.79212457 1
1 89848697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6292;ERATE=0.0005;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89848782 . T TA 16359 PASS INDEL;BAVGPOST=0.938;BRSQ=0.883;LDAF=0.6748;AVGPOST=0.8955;RSQ=0.8329;ERATE=0.0192;THETA=0.0004;AC=1518;AN=2184 GT:DS:GL:BD 0.69505495 1
1 89848783 rs78855074 A AT 78178 PASS INDEL;BAVGPOST=0.965;BRSQ=0.926;LDAF=0.7750;AVGPOST=0.9723;RSQ=0.9482;ERATE=0.0004;THETA=0.0019;AC=1698;AN=2184 GT:DS:GL:BD 0.77747256 1
1 89848784 . T TG 9943 PASS INDEL;BAVGPOST=0.945;BRSQ=0.897;LDAF=0.6885;AVGPOST=0.9238;RSQ=0.8776;ERATE=0.0053;THETA=0.0004;AC=1527;AN=2184 GT:DS:GL:BD 0.69917583 1
1 89848785 . T TG 16783 PASS INDEL;BAVGPOST=0.945;BRSQ=0.900;LDAF=0.7018;AVGPOST=0.9299;RSQ=0.8886;ERATE=0.0039;THETA=0.0005;AC=1554;AN=2184 GT:DS:GL:BD 0.71153843 1
1 89848786 . T TA 9954 PASS INDEL;BAVGPOST=0.926;BRSQ=0.868;LDAF=0.6858;AVGPOST=0.8989;RSQ=0.8416;ERATE=0.0181;THETA=0.0010;AC=1530;AN=2184 GT:DS:GL:BD 0.70054942 1
1 89848904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9493;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89848968 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89849027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89849077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9708;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89849192 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89849201 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8629;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 89849207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89849220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89849256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89849268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1197;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 89849294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89849308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89849320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89849350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8629;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 89849441 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8629;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 89849485 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 89849526 . GT G 4 PASS INDEL;BAVGPOST=0.999;BRSQ=0.572;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89849574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5594;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=1222;AN=2184 GT:DS:GL:BD 0.55952382 1
1 89849602 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 89849742 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8629;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 89849839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89849931 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89850004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1212;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0007;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 89850115 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.5597;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0004;THETA=0.0012;AC=1222;AN=2184 GT:DS:GL:BD 0.55952382 1
1 89850182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89850233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89850237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7239;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89850315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8356;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89850348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8628;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 89850447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89850521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89850812 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89850843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 89850867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89850891 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89850972 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89851112 . T TC 655 PASS INDEL;BAVGPOST=0.988;BRSQ=0.739;LDAF=0.0089;AVGPOST=0.9933;RSQ=0.6998;ERATE=0.0006;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 89851338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.4483;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89851344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0081;AVGPOST=0.9972;RSQ=0.8524;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89851456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0003;THETA=0.0022;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89851488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7181;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89851522 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8123;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89851686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0105;AVGPOST=0.9976;RSQ=0.9101;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 89851738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89851942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89852069 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6352;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89852084 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89852170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5612;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=1225;AN=2184 GT:DS:GL:BD 0.56089741 1
1 89852274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89852341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89852410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8639;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0004;THETA=0.0009;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89852423 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9859;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89852438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7215;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89852465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7917;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89852478 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7548;ERATE=0.0004;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89852508 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6094;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89852519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8760;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=1913;AN=2184 GT:DS:GL:BD 0.87591577 1
1 89852554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8636;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89852566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8825;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89852598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89852803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8637;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0004;THETA=0.0009;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89852833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5992;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89852962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89853000 . C CAGAT 155 PASS INDEL;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5357;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89853012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5802;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89853154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89853168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5950;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89853169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0068;AVGPOST=0.9989;RSQ=0.9394;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 89853175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0053;AVGPOST=0.9987;RSQ=0.9122;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89853251 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.5245;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89853313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8596;AVGPOST=0.9947;RSQ=0.9831;ERATE=0.0007;THETA=0.0018;AC=1881;AN=2184 GT:DS:GL:BD 0.86126375 1
1 89853333 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6701;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89853364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89853418 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8366;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89853467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0127;AVGPOST=0.9987;RSQ=0.9526;ERATE=0.0005;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89853485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8022;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89853550 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4445;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89853603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8509;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89853606 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9034;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89853628 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89853711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89853731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8985;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89853900 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6092;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89853920 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.947;LDAF=0.0268;AVGPOST=0.9967;RSQ=0.9581;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 89853936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1354;AVGPOST=0.9953;RSQ=0.9837;ERATE=0.0008;THETA=0.0007;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 89853951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5778;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89854008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6496;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89854102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7033;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89854147 . TTC T 15411 PASS INDEL;BAVGPOST=0.954;BRSQ=0.885;LDAF=0.8004;AVGPOST=0.9555;RSQ=0.8978;ERATE=0.0020;THETA=0.0006;AC=1762;AN=2184 GT:DS:GL:BD 0.80677658 1
1 89854148 rs11288664 TC T 59586 PASS INDEL;BAVGPOST=0.986;BRSQ=0.949;LDAF=0.8585;AVGPOST=0.9908;RSQ=0.9695;ERATE=0.0007;THETA=0.0012;AC=1879;AN=2184 GT:DS:GL:BD 0.86034799 1
1 89854210 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.745;LDAF=0.0230;AVGPOST=0.9933;RSQ=0.8740;ERATE=0.0007;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 89854249 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.974;LDAF=0.5520;AVGPOST=0.9812;RSQ=0.9721;ERATE=0.0013;THETA=0.0005;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 89854285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.971;LDAF=0.1226;AVGPOST=0.9944;RSQ=0.9785;ERATE=0.0008;THETA=0.0006;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 89854913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1208;AVGPOST=0.9969;RSQ=0.9892;ERATE=0.0004;THETA=0.0040;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 89854925 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.5475;AVGPOST=0.9862;RSQ=0.9802;ERATE=0.0020;THETA=0.0004;AC=1194;AN=2184 GT:DS:GL:BD 0.54670328 1
1 89855086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.897;LDAF=0.0821;AVGPOST=0.9969;RSQ=0.9824;ERATE=0.0004;THETA=0.0003;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 89855297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.752;BRSQ=0.542;LDAF=0.5996;AVGPOST=0.7392;RSQ=0.5676;ERATE=0.0582;THETA=0.0009;AC=1396;AN=2184 GT:DS:GL:BD 0.63919413 1
1 89855364 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.702;BRSQ=0.456;LDAF=0.6848;AVGPOST=0.7992;RSQ=0.6816;ERATE=0.0097;THETA=0.0005;AC=1572;AN=2184 GT:DS:GL:BD 0.71978021 1
1 89855438 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.847;BRSQ=0.647;LDAF=0.7627;AVGPOST=0.8527;RSQ=0.7326;ERATE=0.0056;THETA=0.0005;AC=1726;AN=2184 GT:DS:GL:BD 0.79029304 1
1 89855441 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.847;BRSQ=0.644;LDAF=0.7501;AVGPOST=0.8250;RSQ=0.6762;ERATE=0.0100;THETA=0.0008;AC=1733;AN=2184 GT:DS:GL:BD 0.79349816 1
1 89855486 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.477;LDAF=0.0081;AVGPOST=0.9898;RSQ=0.5157;ERATE=0.0010;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89855638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.9269;ERATE=0.0003;THETA=0.0039;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89855671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8234;ERATE=0.0003;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89855702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9305;ERATE=0.0004;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89855788 . C CA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5174;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89855948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1215;AVGPOST=0.9990;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 89856001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8633;AVGPOST=0.9982;RSQ=0.9946;ERATE=0.0004;THETA=0.0006;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 89856019 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89856040 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5601;AVGPOST=0.9957;RSQ=0.9943;ERATE=0.0004;THETA=0.0008;AC=1221;AN=2184 GT:DS:GL:BD 0.55906594 1
1 89856091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0377;AVGPOST=0.9996;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 89856165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9383;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89856280 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8278;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89856292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0295;AVGPOST=0.9994;RSQ=0.9913;ERATE=0.0004;THETA=0.0009;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 89856371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0098;AVGPOST=0.9991;RSQ=0.9523;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 89856466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89856493 . T TG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0029;AVGPOST=0.9967;RSQ=0.6039;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89856683 . CTG C 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89856729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9388;ERATE=0.0004;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89856733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.8637;AVGPOST=0.9985;RSQ=0.9945;ERATE=0.0003;THETA=0.0007;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89856740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.8637;AVGPOST=0.9981;RSQ=0.9930;ERATE=0.0005;THETA=0.0007;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89856747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7051;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89856796 . TG T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4440;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89856896 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89856897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8579;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89856957 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6245;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89857096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89857106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8626;AVGPOST=0.9988;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 89857218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8048;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89857325 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6666;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89857356 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0296;AVGPOST=0.9994;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 89857427 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0122;AVGPOST=0.9997;RSQ=0.9899;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89857495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5654;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89857541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8555;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89857646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0075;AVGPOST=0.9986;RSQ=0.9278;ERATE=0.0004;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89857648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89857747 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5250;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89857854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8547;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89857913 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5413;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89857947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7866;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89858016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89858025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 89858032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0126;AVGPOST=0.9995;RSQ=0.9809;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89858154 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.915;LDAF=0.0180;AVGPOST=0.9984;RSQ=0.9581;ERATE=0.0003;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 89858160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6237;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89858166 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6226;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89858190 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.967;LDAF=0.1506;AVGPOST=0.9894;RSQ=0.9704;ERATE=0.0009;THETA=0.0005;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 89858205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5710;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89858242 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.825;LDAF=0.0084;AVGPOST=0.9969;RSQ=0.8745;ERATE=0.0005;THETA=0.0025;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 89858323 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5808;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89858402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8263;ERATE=0.0004;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89858492 . AAC A 12111 PASS INDEL;BAVGPOST=0.988;BRSQ=0.954;LDAF=0.8506;AVGPOST=0.9776;RSQ=0.9356;ERATE=0.0017;THETA=0.0004;AC=1875;AN=2184 GT:DS:GL:BD 0.85851645 1
1 89858493 rs75578762 AC A 90566 PASS INDEL;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.8617;AVGPOST=0.9968;RSQ=0.9894;ERATE=0.0004;THETA=0.0004;AC=1883;AN=2184 GT:DS:GL:BD 0.86217946 1
1 89858505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8103;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89858602 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0050;AVGPOST=0.9968;RSQ=0.7479;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89858643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0378;AVGPOST=0.9977;RSQ=0.9782;ERATE=0.0003;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 89858644 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89858645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5543;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89858693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5932;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89858723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0384;AVGPOST=0.9984;RSQ=0.9841;ERATE=0.0003;THETA=0.0007;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 89858728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.5865;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89858940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89859092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5256;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89859156 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7079;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89859174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.8636;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89859206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89859254 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0065;AVGPOST=0.9990;RSQ=0.9436;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 89859269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8620;AVGPOST=0.9960;RSQ=0.9881;ERATE=0.0003;THETA=0.0005;AC=1883;AN=2184 GT:DS:GL:BD 0.86217946 1
1 89859384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89859479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0059;AVGPOST=0.9979;RSQ=0.8716;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89859492 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8638;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0004;THETA=0.0002;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89859585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9784;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 89859595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0111;AVGPOST=0.9988;RSQ=0.9583;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 89859664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89859739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89859768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8638;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89859885 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89859895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89860015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89860101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9688;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89860142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9494;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89860268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0010;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 89860283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0313;AVGPOST=0.9986;RSQ=0.9817;ERATE=0.0003;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 89860343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9033;ERATE=0.0003;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89860405 . G GC 2567 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0102;AVGPOST=0.9989;RSQ=0.9469;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 89860456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89860457 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9669;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 89860749 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0068;AVGPOST=0.9995;RSQ=0.9664;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 89860752 . GGA G 1746 PASS INDEL;BAVGPOST=0.977;BRSQ=0.711;LDAF=0.0553;AVGPOST=0.9510;RSQ=0.6212;ERATE=0.0148;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 89860773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9668;ERATE=0.0003;THETA=0.0014;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89860783 rs72125855 CAGGA C 207 PASS INDEL;BAVGPOST=0.932;BRSQ=0.306;LDAF=0.0776;AVGPOST=0.8933;RSQ=0.4319;ERATE=0.0099;THETA=0.0008;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 89860806 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.841;LDAF=0.6117;AVGPOST=0.8834;RSQ=0.8138;ERATE=0.0396;THETA=0.0005;AC=1374;AN=2184 GT:DS:GL:BD 0.62912089 1
1 89860830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.771;LDAF=0.7754;AVGPOST=0.8907;RSQ=0.7606;ERATE=0.0346;THETA=0.0006;AC=1748;AN=2184 GT:DS:GL:BD 0.80036628 1
1 89860844 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0125;AVGPOST=0.9995;RSQ=0.9806;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89860891 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5596;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0004;THETA=0.0008;AC=1223;AN=2184 GT:DS:GL:BD 0.55998170 1
1 89861092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6093;AVGPOST=0.9981;RSQ=0.9970;ERATE=0.0004;THETA=0.0006;AC=1332;AN=2184 GT:DS:GL:BD 0.60989010 1
1 89861295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89861561 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89861686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89861728 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89861735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5726;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89861758 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8218;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89862041 . G GA 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5364;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89862225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89862308 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89862428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6050;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89862565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8764;AVGPOST=0.9985;RSQ=0.9947;ERATE=0.0004;THETA=0.0005;AC=1913;AN=2184 GT:DS:GL:BD 0.87591577 1
1 89862637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8718;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89862646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8171;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89862685 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0074;AVGPOST=0.9994;RSQ=0.9621;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89862712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9727;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 89862737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0063;AVGPOST=0.9990;RSQ=0.9380;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89863281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.927;LDAF=0.0269;AVGPOST=0.9933;RSQ=0.9125;ERATE=0.0004;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 89863432 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0818;AVGPOST=0.9988;RSQ=0.9925;ERATE=0.0004;THETA=0.0010;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 89863460 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9671;ERATE=0.0004;THETA=0.0056;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89863748 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.788;LDAF=0.0085;AVGPOST=0.9973;RSQ=0.8535;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 89863762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.8617;AVGPOST=0.9962;RSQ=0.9870;ERATE=0.0009;THETA=0.0009;AC=1883;AN=2184 GT:DS:GL:BD 0.86217946 1
1 89864119 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8637;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0003;THETA=0.0009;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89864150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0139;AVGPOST=0.9997;RSQ=0.9895;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 89864285 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6965;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89864372 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89864481 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6409;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89864530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9116;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89864609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1212;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 89864677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89864687 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89864732 . CAG C 714 PASS INDEL;BAVGPOST=0.997;BRSQ=0.822;LDAF=0.0074;AVGPOST=0.9963;RSQ=0.8199;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89864805 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5131;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89864906 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5926;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89864917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8630;AVGPOST=0.9983;RSQ=0.9942;ERATE=0.0004;THETA=0.0005;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89864961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89865097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89865121 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0825;AVGPOST=0.9976;RSQ=0.9868;ERATE=0.0005;THETA=0.0007;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 89865215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89865216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.6024;ERATE=0.0004;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89865480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8627;AVGPOST=0.9973;RSQ=0.9911;ERATE=0.0006;THETA=0.0040;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 89865517 . CAT C 342 PASS INDEL;BAVGPOST=0.998;BRSQ=0.779;LDAF=0.0053;AVGPOST=0.9977;RSQ=0.8390;ERATE=0.0004;THETA=0.0030;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89865659 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8632;AVGPOST=0.9987;RSQ=0.9949;ERATE=0.0004;THETA=0.0008;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89865747 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.520;LDAF=0.0043;AVGPOST=0.9962;RSQ=0.6735;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89865773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0125;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89865786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1206;AVGPOST=0.9983;RSQ=0.9938;ERATE=0.0005;THETA=0.0010;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 89865819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8637;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0051;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89865825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1197;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 89865955 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8636;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0003;THETA=0.0067;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89865979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0125;AVGPOST=0.9997;RSQ=0.9895;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89866025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.910;LDAF=0.8401;AVGPOST=0.9806;RSQ=0.9504;ERATE=0.0005;THETA=0.0006;AC=1839;AN=2184 GT:DS:GL:BD 0.84203297 1
1 89866053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.784;LDAF=0.0050;AVGPOST=0.9975;RSQ=0.7893;ERATE=0.0004;THETA=0.0027;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89866075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.926;LDAF=0.8170;AVGPOST=0.9809;RSQ=0.9553;ERATE=0.0009;THETA=0.0003;AC=1787;AN=2184 GT:DS:GL:BD 0.81822342 1
1 89866142 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0808;AVGPOST=0.9977;RSQ=0.9876;ERATE=0.0004;THETA=0.0009;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 89866149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89866154 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.970;LDAF=0.1106;AVGPOST=0.9925;RSQ=0.9742;ERATE=0.0005;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 89866192 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4611;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89866271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0376;AVGPOST=0.9991;RSQ=0.9910;ERATE=0.0003;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 89866305 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6578;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89866373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89866467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0063;AVGPOST=0.9975;RSQ=0.8349;ERATE=0.0006;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89866499 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0056;AVGPOST=0.9983;RSQ=0.8741;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89866523 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7359;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89866530 . GCTCT G 271 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7594;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89866580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8798;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89866660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8608;AVGPOST=0.9964;RSQ=0.9880;ERATE=0.0008;THETA=0.0004;AC=1880;AN=2184 GT:DS:GL:BD 0.86080587 1
1 89866760 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5824;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89866819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.911;LDAF=0.0252;AVGPOST=0.9946;RSQ=0.9146;ERATE=0.0006;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 89866841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5949;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89867060 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0137;AVGPOST=0.9996;RSQ=0.9869;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 89867067 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6889;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89867085 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.946;LDAF=0.8668;AVGPOST=0.9859;RSQ=0.9563;ERATE=0.0028;THETA=0.0011;AC=1903;AN=2184 GT:DS:GL:BD 0.87133700 1
1 89867118 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.966;LDAF=0.8134;AVGPOST=0.9836;RSQ=0.9613;ERATE=0.0028;THETA=0.0004;AC=1783;AN=2184 GT:DS:GL:BD 0.81639194 1
1 89867127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.966;LDAF=0.8160;AVGPOST=0.9897;RSQ=0.9737;ERATE=0.0008;THETA=0.0002;AC=1787;AN=2184 GT:DS:GL:BD 0.81822342 1
1 89867243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5272;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89867249 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7632;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89867270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.936;LDAF=0.7952;AVGPOST=0.9705;RSQ=0.9336;ERATE=0.0051;THETA=0.0009;AC=1753;AN=2184 GT:DS:GL:BD 0.80265570 1
1 89867318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0058;AVGPOST=0.9988;RSQ=0.9084;ERATE=0.0006;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89867385 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0080;AVGPOST=0.9977;RSQ=0.8623;ERATE=0.0004;THETA=0.0058;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 89867514 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.860;LDAF=0.0223;AVGPOST=0.9912;RSQ=0.8567;ERATE=0.0005;THETA=0.0014;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89867702 . TC T 4604 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0349;AVGPOST=0.9988;RSQ=0.9854;ERATE=0.0004;THETA=0.0045;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 89867712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89867837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.948;LDAF=0.8685;AVGPOST=0.9871;RSQ=0.9576;ERATE=0.0015;THETA=0.0003;AC=1904;AN=2184 GT:DS:GL:BD 0.87179488 1
1 89867883 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1328;AVGPOST=0.9981;RSQ=0.9931;ERATE=0.0004;THETA=0.0010;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 89867940 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.975;LDAF=0.8535;AVGPOST=0.9826;RSQ=0.9467;ERATE=0.0049;THETA=0.0003;AC=1876;AN=2184 GT:DS:GL:BD 0.85897434 1
1 89868058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0380;AVGPOST=0.9994;RSQ=0.9929;ERATE=0.0003;THETA=0.0007;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 89868080 . A AC 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8178;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89868084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8636;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0003;THETA=0.0012;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89868178 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9991;RSQ=0.9582;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 89868229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0031;AVGPOST=0.9974;RSQ=0.6553;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89868453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.799;LDAF=0.0057;AVGPOST=0.9984;RSQ=0.8831;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89868495 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0121;AVGPOST=0.9991;RSQ=0.9721;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 89868516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89868603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89868646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89868661 . C CTCT 126 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5012;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89868723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0306;AVGPOST=0.9989;RSQ=0.9848;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 89868804 . GT G 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89868921 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7803;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89869034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5266;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89869112 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89869209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8636;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89869382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8581;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89869408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5950;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89869459 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89869494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89869525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5792;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89869586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0321;AVGPOST=0.9989;RSQ=0.9853;ERATE=0.0005;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 89869628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6342;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89869807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6758;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89869808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0109;AVGPOST=0.9984;RSQ=0.9466;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 89870072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6025;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0008;THETA=0.0008;AC=1317;AN=2184 GT:DS:GL:BD 0.60302198 1
1 89870139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.851;LDAF=0.0128;AVGPOST=0.9968;RSQ=0.8965;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 89870148 . GTGGATT G 2680 PASS INDEL;BAVGPOST=0.996;BRSQ=0.857;LDAF=0.0109;AVGPOST=0.9982;RSQ=0.9294;ERATE=0.0004;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 89870296 . TG T 20748 PASS INDEL;BAVGPOST=0.982;BRSQ=0.966;LDAF=0.5918;AVGPOST=0.9721;RSQ=0.9605;ERATE=0.0051;THETA=0.0003;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 89870297 rs60301765 GC G 80680 PASS INDEL;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.6085;AVGPOST=0.9968;RSQ=0.9951;ERATE=0.0003;THETA=0.0007;AC=1329;AN=2184 GT:DS:GL:BD 0.60851645 1
1 89870396 rs112750263 A AG 38027 PASS INDEL;BAVGPOST=0.965;BRSQ=0.885;LDAF=0.8214;AVGPOST=0.9718;RSQ=0.9288;ERATE=0.0029;THETA=0.0004;AC=1787;AN=2184 GT:DS:GL:BD 0.81822342 1
1 89870398 rs61381960 G GT 72200 PASS INDEL;BAVGPOST=0.926;BRSQ=0.836;LDAF=0.7093;AVGPOST=0.9020;RSQ=0.8338;ERATE=0.0215;THETA=0.0005;AC=1578;AN=2184 GT:DS:GL:BD 0.72252744 1
1 89870420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7832;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89870485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8638;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89870533 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7966;ERATE=0.0005;THETA=0.0048;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89870834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8741;AVGPOST=0.9965;RSQ=0.9871;ERATE=0.0009;THETA=0.0006;AC=1912;AN=2184 GT:DS:GL:BD 0.87545788 1
1 89870851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7576;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89870874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8630;AVGPOST=0.9985;RSQ=0.9949;ERATE=0.0005;THETA=0.0005;AC=1885;AN=2184 GT:DS:GL:BD 0.86309522 1
1 89871015 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4815;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89871183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8494;ERATE=0.0004;THETA=0.0046;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89871229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89871274 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5452;ERATE=0.0004;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89871353 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89871365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89871366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0015;AVGPOST=0.9973;RSQ=0.3293;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89871419 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89871437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8626;AVGPOST=0.9991;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 89871485 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89871507 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4845;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89871614 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8899;ERATE=0.0003;THETA=0.0023;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89871651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1300;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 89871848 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89871906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.961;LDAF=0.1472;AVGPOST=0.9902;RSQ=0.9699;ERATE=0.0005;THETA=0.0003;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 89872002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8636;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89872030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89872101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5872;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89872148 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9984;RSQ=0.9400;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 89872166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89872336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0050;AVGPOST=0.9982;RSQ=0.8645;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89872402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8637;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89872474 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8637;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0006;THETA=0.0013;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89872513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.515;LDAF=0.0054;AVGPOST=0.9944;RSQ=0.5993;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89872522 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6024;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89872530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7698;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89872631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8635;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89872651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8636;AVGPOST=0.9991;RSQ=0.9965;ERATE=0.0004;THETA=0.0008;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89872793 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5614;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89872840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.4802;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89872877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89872966 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89873134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8753;AVGPOST=0.9976;RSQ=0.9926;ERATE=0.0004;THETA=0.0005;AC=1911;AN=2184 GT:DS:GL:BD 0.87500000 1
1 89873188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8641;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 89873226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0079;AVGPOST=0.9992;RSQ=0.9548;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 89873234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6921;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89873394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8640;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0004;THETA=0.0009;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 89873613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 89873685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6923;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89873733 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89873875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89874057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6112;AVGPOST=0.9957;RSQ=0.9931;ERATE=0.0007;THETA=0.0004;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 89874150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89874291 . ACC A 4773 PASS INDEL;BAVGPOST=0.976;BRSQ=0.888;LDAF=0.1177;AVGPOST=0.9925;RSQ=0.9734;ERATE=0.0005;THETA=0.0003;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 89874395 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89874463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89874565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6585;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89874622 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89874651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8398;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89874683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7219;ERATE=0.0003;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89875166 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89875298 . C CT 103 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8340;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89875305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0074;AVGPOST=0.9970;RSQ=0.8534;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 89875411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6976;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89875435 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8545;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89875524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8635;AVGPOST=0.9985;RSQ=0.9959;ERATE=0.0003;THETA=0.0009;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89875573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0304;AVGPOST=0.9995;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 89875656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.8643;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0004;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 89875716 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7012;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89875744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89875745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89875791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.8641;AVGPOST=0.9991;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 89875814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9883;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 89875844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 89875916 . CA C 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5890;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89875926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8648;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89875935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8095;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89876003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89876011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89876020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89876132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8643;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 89876211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1325;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 89876287 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9996;RSQ=0.9827;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 89876318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7652;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89876336 rs11415113 T TA 5135 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0381;AVGPOST=0.9993;RSQ=0.9918;ERATE=0.0003;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 89876606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0124;AVGPOST=0.9978;RSQ=0.9288;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 89876699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.817;LDAF=0.0144;AVGPOST=0.9952;RSQ=0.8741;ERATE=0.0006;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 89876724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.736;LDAF=0.0105;AVGPOST=0.9953;RSQ=0.8138;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89876808 . ATTTG A 21793 PASS INDEL;BAVGPOST=0.995;BRSQ=0.977;LDAF=0.1201;AVGPOST=0.9963;RSQ=0.9871;ERATE=0.0006;THETA=0.0007;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 89876941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5175;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89877031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.872;LDAF=0.0100;AVGPOST=0.9981;RSQ=0.9367;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 89877084 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0069;AVGPOST=0.9980;RSQ=0.8959;ERATE=0.0004;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89877225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89877288 . A AT 201 PASS INDEL;BAVGPOST=0.997;BRSQ=0.767;LDAF=0.0070;AVGPOST=0.9969;RSQ=0.8163;ERATE=0.0007;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89877309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0037;AVGPOST=0.9961;RSQ=0.5851;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89877480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5222;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89877573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8253;AVGPOST=0.9974;RSQ=0.9924;ERATE=0.0006;THETA=0.0003;AC=1802;AN=2184 GT:DS:GL:BD 0.82509160 1
1 89877590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0382;AVGPOST=0.9990;RSQ=0.9888;ERATE=0.0004;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 89877682 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4313;ERATE=0.0005;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89877781 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8628;AVGPOST=0.9962;RSQ=0.9857;ERATE=0.0008;THETA=0.0009;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 89877890 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0043;AVGPOST=0.9973;RSQ=0.7435;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89877997 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0024;AVGPOST=0.9967;RSQ=0.4388;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89878057 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.4909;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89878127 . A ATTAT 752 PASS INDEL;BAVGPOST=0.983;BRSQ=0.792;LDAF=0.0471;AVGPOST=0.9881;RSQ=0.9007;ERATE=0.0010;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 89878637 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.897;LDAF=0.0353;AVGPOST=0.9956;RSQ=0.9494;ERATE=0.0004;THETA=0.0013;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 89878951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.8942;ERATE=0.0005;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 89879054 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7007;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89879069 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0378;AVGPOST=0.9982;RSQ=0.9844;ERATE=0.0004;THETA=0.0063;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 89879084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.788;LDAF=0.0998;AVGPOST=0.9716;RSQ=0.8923;ERATE=0.0010;THETA=0.0023;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 89879168 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0045;AVGPOST=0.9939;RSQ=0.5058;ERATE=0.0008;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89879299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.856;BRSQ=0.114;LDAF=0.1885;AVGPOST=0.7877;RSQ=0.4733;ERATE=0.0061;THETA=0.0005;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 89879308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.811;BRSQ=0.091;LDAF=0.1171;AVGPOST=0.8391;RSQ=0.3730;ERATE=0.0084;THETA=0.0015;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 89879349 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.742;BRSQ=0.542;LDAF=0.6848;AVGPOST=0.7884;RSQ=0.6864;ERATE=0.0086;THETA=0.0006;AC=1544;AN=2184 GT:DS:GL:BD 0.70695972 1
1 89879737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.764;LDAF=0.0074;AVGPOST=0.9987;RSQ=0.9254;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89879966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6806;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89880939 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89880979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8104;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89881417 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.835;BRSQ=0.732;LDAF=0.7049;AVGPOST=0.8309;RSQ=0.7424;ERATE=0.0061;THETA=0.0005;AC=1601;AN=2184 GT:DS:GL:BD 0.73305863 1
1 89881439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.918;BRSQ=0.863;LDAF=0.6730;AVGPOST=0.9125;RSQ=0.8688;ERATE=0.0062;THETA=0.0006;AC=1499;AN=2184 GT:DS:GL:BD 0.68635529 1
1 89881454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.716;LDAF=0.0047;AVGPOST=0.9985;RSQ=0.8495;ERATE=0.0007;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89881499 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6725;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89881932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.861;LDAF=0.8220;AVGPOST=0.9358;RSQ=0.8440;ERATE=0.0079;THETA=0.0005;AC=1828;AN=2184 GT:DS:GL:BD 0.83699632 1
1 89881939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.4956;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89882209 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.852;LDAF=0.8213;AVGPOST=0.9693;RSQ=0.9265;ERATE=0.0005;THETA=0.0005;AC=1794;AN=2184 GT:DS:GL:BD 0.82142860 1
1 89882210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.851;LDAF=0.8218;AVGPOST=0.9698;RSQ=0.9285;ERATE=0.0005;THETA=0.0007;AC=1794;AN=2184 GT:DS:GL:BD 0.82142860 1
1 89882347 . CA C 483 PASS INDEL;BAVGPOST=0.798;BRSQ=0.125;LDAF=0.1889;AVGPOST=0.7723;RSQ=0.4106;ERATE=0.0134;THETA=0.0008;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 89882861 . CT C 2545 PASS INDEL;BAVGPOST=0.916;BRSQ=0;LDAF=0.9035;AVGPOST=0.8545;RSQ=0.3474;ERATE=0.0054;THETA=0.0006;AC=2057;AN=2184 GT:DS:GL:BD 0.94184983 1
1 89883101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.804;BRSQ=0.683;LDAF=0.6437;AVGPOST=0.7360;RSQ=0.6179;ERATE=0.0276;THETA=0.0004;AC=1523;AN=2184 GT:DS:GL:BD 0.69734430 1
1 89883122 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.686;BRSQ=0.522;LDAF=0.5991;AVGPOST=0.7011;RSQ=0.5725;ERATE=0.0224;THETA=0.0010;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 89883823 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.872;LDAF=0.8369;AVGPOST=0.9614;RSQ=0.8936;ERATE=0.0023;THETA=0.0009;AC=1844;AN=2184 GT:DS:GL:BD 0.84432232 1
1 89883870 . G GT 142 PASS INDEL;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3700;ERATE=0.0006;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89883890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.926;LDAF=0.0416;AVGPOST=0.9906;RSQ=0.9123;ERATE=0.0006;THETA=0.0012;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 89883904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0029;AVGPOST=0.9958;RSQ=0.3830;ERATE=0.0007;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89883919 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0053;AVGPOST=0.9932;RSQ=0.4890;ERATE=0.0009;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89883925 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6351;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89883928 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0031;AVGPOST=0.9977;RSQ=0.7040;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89883969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.803;LDAF=0.7697;AVGPOST=0.8415;RSQ=0.6782;ERATE=0.0175;THETA=0.0009;AC=1764;AN=2184 GT:DS:GL:BD 0.80769229 1
1 89884009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.397;LDAF=0.0189;AVGPOST=0.9764;RSQ=0.5015;ERATE=0.0013;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 89884065 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.728;LDAF=0.0978;AVGPOST=0.9644;RSQ=0.8669;ERATE=0.0009;THETA=0.0007;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 89884073 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.725;LDAF=0.0924;AVGPOST=0.9644;RSQ=0.8623;ERATE=0.0005;THETA=0.0007;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 89884103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.569;LDAF=0.0082;AVGPOST=0.9924;RSQ=0.6504;ERATE=0.0006;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89884217 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89884224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1321;AVGPOST=0.9966;RSQ=0.9876;ERATE=0.0004;THETA=0.0006;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 89884261 . CAT C 748 PASS INDEL;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9707;ERATE=0.0003;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89884268 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7215;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89884405 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.527;LDAF=0.0056;AVGPOST=0.9939;RSQ=0.5932;ERATE=0.0011;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89884408 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.6952;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89884447 . A AC 9683 PASS INDEL;BAVGPOST=0.928;BRSQ=0.795;LDAF=0.7691;AVGPOST=0.8801;RSQ=0.7499;ERATE=0.0334;THETA=0.0040;AC=1740;AN=2184 GT:DS:GL:BD 0.79670328 1
1 89884450 rs72510743 C CT 90404 PASS INDEL;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.8627;AVGPOST=0.9960;RSQ=0.9864;ERATE=0.0004;THETA=0.0003;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 89884502 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1201;AVGPOST=0.9964;RSQ=0.9882;ERATE=0.0005;THETA=0.0010;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 89884668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0041;AVGPOST=0.9968;RSQ=0.7034;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89884722 . AC A 508 PASS INDEL;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0051;AVGPOST=0.9983;RSQ=0.8489;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 89884734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6031;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89884989 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5405;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89885099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5736;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89885300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5576;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89885338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1213;AVGPOST=0.9981;RSQ=0.9938;ERATE=0.0004;THETA=0.0004;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 89885492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.8641;AVGPOST=0.9988;RSQ=0.9953;ERATE=0.0004;THETA=0.0012;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 89885543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5957;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89885555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7995;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89885558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8763;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0005;THETA=0.0003;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 89885854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.960;LDAF=0.8494;AVGPOST=0.9858;RSQ=0.9616;ERATE=0.0055;THETA=0.0003;AC=1856;AN=2184 GT:DS:GL:BD 0.84981686 1
1 89885896 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1208;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0003;THETA=0.0007;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 89885906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1208;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0010;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 89885948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89886028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.616;LDAF=0.0076;AVGPOST=0.9911;RSQ=0.6011;ERATE=0.0022;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89886078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5846;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89886140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9571;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89886198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0391;AVGPOST=0.9886;RSQ=0.9095;ERATE=0.0004;THETA=0.0008;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 89886229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6109;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0017;AC=1335;AN=2184 GT:DS:GL:BD 0.61126375 1
1 89886280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89886422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9417;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89886714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8642;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 89886775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0011;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89886796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8642;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0004;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 89887017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1287;AVGPOST=0.9950;RSQ=0.9842;ERATE=0.0058;THETA=0.0023;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 89887094 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8642;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0006;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 89887114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89887150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89887195 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89887212 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8641;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0003;THETA=0.0019;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 89887469 rs67428662 GA G 46 PASS INDEL;BAVGPOST=0.479;BRSQ=0.036;LDAF=0.1586;AVGPOST=0.7677;RSQ=0.3132;ERATE=0.0102;THETA=0.0004;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 89887603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1551;AVGPOST=0.9974;RSQ=0.9932;ERATE=0.0007;THETA=0.0014;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 89887632 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9694;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89887751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89887843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89887862 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89888104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0130;AVGPOST=0.9986;RSQ=0.9558;ERATE=0.0005;THETA=0.0029;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89888151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.8636;AVGPOST=0.9987;RSQ=0.9948;ERATE=0.0005;THETA=0.0006;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 89888158 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89888196 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0814;AVGPOST=0.9991;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 89888262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7448;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89888313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89888371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8640;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89888530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.7660;AVGPOST=0.9918;RSQ=0.9801;ERATE=0.0007;THETA=0.0007;AC=1671;AN=2184 GT:DS:GL:BD 0.76510990 1
1 89888552 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.7648;AVGPOST=0.9916;RSQ=0.9801;ERATE=0.0009;THETA=0.0008;AC=1668;AN=2184 GT:DS:GL:BD 0.76373625 1
1 89888588 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.944;LDAF=0.7385;AVGPOST=0.9740;RSQ=0.9386;ERATE=0.0330;THETA=0.0015;AC=1622;AN=2184 GT:DS:GL:BD 0.74267399 1
1 89888698 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0005;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89888952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0077;AVGPOST=0.9978;RSQ=0.8875;ERATE=0.0004;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 89889012 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0377;AVGPOST=0.9989;RSQ=0.9886;ERATE=0.0004;THETA=0.0023;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 89889070 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.913;LDAF=0.1379;AVGPOST=0.9676;RSQ=0.9022;ERATE=0.0084;THETA=0.0008;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 89889456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1237;AVGPOST=0.9971;RSQ=0.9911;ERATE=0.0038;THETA=0.0003;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 89889699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6340;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89889745 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89889823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89890013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.834;LDAF=0.0101;AVGPOST=0.9960;RSQ=0.8504;ERATE=0.0067;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 89890038 . CTGTTTT C 168 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0048;AVGPOST=0.9956;RSQ=0.6737;ERATE=0.0013;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89890157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89890261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89890330 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0091;AVGPOST=0.9986;RSQ=0.9368;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 89890777 rs66495219 CT C 83322 PASS INDEL;BAVGPOST=0.986;BRSQ=0.979;LDAF=0.5533;AVGPOST=0.9906;RSQ=0.9871;ERATE=0.0004;THETA=0.0004;AC=1209;AN=2184 GT:DS:GL:BD 0.55357140 1
1 89890780 . TG T 14978 PASS INDEL;BAVGPOST=0.935;BRSQ=0.890;LDAF=0.4998;AVGPOST=0.9258;RSQ=0.8972;ERATE=0.0171;THETA=0.0004;AC=1121;AN=2184 GT:DS:GL:BD 0.51327837 1
1 89890820 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89890828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7166;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89890973 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1187;AVGPOST=0.9973;RSQ=0.9895;ERATE=0.0003;THETA=0.0005;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 89891066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8635;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89891263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0065;AVGPOST=0.9983;RSQ=0.9125;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 89891343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0017;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 89891438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8633;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0004;THETA=0.0017;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89891512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8637;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89891887 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89891893 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89891993 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8351;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89892084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.644;LDAF=0.0072;AVGPOST=0.9936;RSQ=0.6559;ERATE=0.0021;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89892356 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0346;AVGPOST=0.9985;RSQ=0.9821;ERATE=0.0003;THETA=0.0005;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 89892554 . CTT C 62 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89892690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.6889;ERATE=0.0006;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89892975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8691;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 89893023 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8637;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89893138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0316;AVGPOST=0.9989;RSQ=0.9873;ERATE=0.0003;THETA=0.0030;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 89893162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6976;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89893178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89893180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89893184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6347;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89893269 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89893307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8809;ERATE=0.0004;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89893322 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6258;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89893387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8642;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0003;THETA=0.0006;AC=1888;AN=2184 GT:DS:GL:BD 0.86446887 1
1 89893406 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89893462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6091;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89893489 . AT A 105 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7199;ERATE=0.0006;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89893530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89893654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0004;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89893686 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89893716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89893738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7623;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89893808 . A ACG 26238 PASS INDEL;BAVGPOST=0.911;BRSQ=0.791;LDAF=0.7562;AVGPOST=0.8729;RSQ=0.7714;ERATE=0.0223;THETA=0.0005;AC=1709;AN=2184 GT:DS:GL:BD 0.78250915 1
1 89893809 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.954;LDAF=0.8160;AVGPOST=0.9768;RSQ=0.9482;ERATE=0.0004;THETA=0.0008;AC=1785;AN=2184 GT:DS:GL:BD 0.81730771 1
1 89893810 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.946;LDAF=0.8172;AVGPOST=0.9759;RSQ=0.9462;ERATE=0.0004;THETA=0.0031;AC=1787;AN=2184 GT:DS:GL:BD 0.81822342 1
1 89893871 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.481;LDAF=0.0071;AVGPOST=0.9910;RSQ=0.5712;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89893971 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6080;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89893981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8150;ERATE=0.0004;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89894112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.8613;AVGPOST=0.9948;RSQ=0.9838;ERATE=0.0005;THETA=0.0026;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89894128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.8601;AVGPOST=0.9923;RSQ=0.9761;ERATE=0.0007;THETA=0.0010;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 89894185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.973;LDAF=0.8572;AVGPOST=0.9895;RSQ=0.9662;ERATE=0.0021;THETA=0.0055;AC=1879;AN=2184 GT:DS:GL:BD 0.86034799 1
1 89894242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1209;AVGPOST=0.9947;RSQ=0.9812;ERATE=0.0006;THETA=0.0015;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 89894259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.946;LDAF=0.8303;AVGPOST=0.9851;RSQ=0.9569;ERATE=0.0014;THETA=0.0005;AC=1813;AN=2184 GT:DS:GL:BD 0.83012819 1
1 89894376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8735;AVGPOST=0.9960;RSQ=0.9852;ERATE=0.0005;THETA=0.0003;AC=1911;AN=2184 GT:DS:GL:BD 0.87500000 1
1 89894416 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.8569;AVGPOST=0.9885;RSQ=0.9633;ERATE=0.0009;THETA=0.0034;AC=1881;AN=2184 GT:DS:GL:BD 0.86126375 1
1 89894471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8631;AVGPOST=0.9979;RSQ=0.9928;ERATE=0.0004;THETA=0.0003;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89894492 rs11326822 AT A 81885 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8625;AVGPOST=0.9964;RSQ=0.9879;ERATE=0.0007;THETA=0.0006;AC=1885;AN=2184 GT:DS:GL:BD 0.86309522 1
1 89894576 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.8609;AVGPOST=0.9954;RSQ=0.9851;ERATE=0.0006;THETA=0.0005;AC=1882;AN=2184 GT:DS:GL:BD 0.86172163 1
1 89894589 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.964;LDAF=0.8220;AVGPOST=0.9778;RSQ=0.9503;ERATE=0.0009;THETA=0.0003;AC=1794;AN=2184 GT:DS:GL:BD 0.82142860 1
1 89894590 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.964;LDAF=0.8242;AVGPOST=0.9796;RSQ=0.9538;ERATE=0.0007;THETA=0.0017;AC=1800;AN=2184 GT:DS:GL:BD 0.82417583 1
1 89894602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9024;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89894619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.705;LDAF=0.0033;AVGPOST=0.9965;RSQ=0.5546;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89894633 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.875;LDAF=0.8327;AVGPOST=0.9819;RSQ=0.9518;ERATE=0.0008;THETA=0.0010;AC=1821;AN=2184 GT:DS:GL:BD 0.83379120 1
1 89894760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8772;AVGPOST=0.9994;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=1915;AN=2184 GT:DS:GL:BD 0.87683153 1
1 89894826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8648;AVGPOST=0.9979;RSQ=0.9930;ERATE=0.0006;THETA=0.0009;AC=1888;AN=2184 GT:DS:GL:BD 0.86446887 1
1 89894884 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8636;AVGPOST=0.9987;RSQ=0.9953;ERATE=0.0004;THETA=0.0006;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89894977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6045;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89894993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.925;LDAF=0.8453;AVGPOST=0.9796;RSQ=0.9506;ERATE=0.0009;THETA=0.0013;AC=1852;AN=2184 GT:DS:GL:BD 0.84798533 1
1 89894994 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8910;ERATE=0.0004;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89895019 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.946;LDAF=0.8404;AVGPOST=0.9844;RSQ=0.9585;ERATE=0.0007;THETA=0.0007;AC=1833;AN=2184 GT:DS:GL:BD 0.83928573 1
1 89895089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.8632;AVGPOST=0.9983;RSQ=0.9942;ERATE=0.0006;THETA=0.0002;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 89895116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8630;AVGPOST=0.9968;RSQ=0.9890;ERATE=0.0005;THETA=0.0014;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 89895182 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1199;AVGPOST=0.9971;RSQ=0.9897;ERATE=0.0004;THETA=0.0002;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 89895193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8641;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0004;THETA=0.0091;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 89895213 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.872;LDAF=0.0210;AVGPOST=0.9941;RSQ=0.9045;ERATE=0.0004;THETA=0.0016;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 89895230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89895383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.966;LDAF=0.8240;AVGPOST=0.9807;RSQ=0.9476;ERATE=0.0026;THETA=0.0022;AC=1804;AN=2184 GT:DS:GL:BD 0.82600731 1
1 89895500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.722;LDAF=0.0074;AVGPOST=0.9924;RSQ=0.5871;ERATE=0.0010;THETA=0.0057;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89895591 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.963;LDAF=0.8498;AVGPOST=0.9863;RSQ=0.9628;ERATE=0.0006;THETA=0.0048;AC=1861;AN=2184 GT:DS:GL:BD 0.85210621 1
1 89895648 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.956;LDAF=0.1186;AVGPOST=0.9931;RSQ=0.9772;ERATE=0.0005;THETA=0.0042;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 89895682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.607;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.5668;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89895722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.779;LDAF=0.0173;AVGPOST=0.9922;RSQ=0.8133;ERATE=0.0005;THETA=0.0017;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 89895782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.964;LDAF=0.0355;AVGPOST=0.9966;RSQ=0.9616;ERATE=0.0004;THETA=0.0010;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 89895806 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0029;AVGPOST=0.9971;RSQ=0.5976;ERATE=0.0006;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89895853 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0122;AVGPOST=0.9984;RSQ=0.9402;ERATE=0.0005;THETA=0.0027;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 89895889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.908;LDAF=0.8391;AVGPOST=0.9718;RSQ=0.9254;ERATE=0.0008;THETA=0.0006;AC=1838;AN=2184 GT:DS:GL:BD 0.84157509 1
1 89895893 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.886;LDAF=0.8332;AVGPOST=0.9584;RSQ=0.8912;ERATE=0.0014;THETA=0.0005;AC=1835;AN=2184 GT:DS:GL:BD 0.84020144 1
1 89895925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.913;LDAF=0.8427;AVGPOST=0.9715;RSQ=0.9237;ERATE=0.0017;THETA=0.0024;AC=1851;AN=2184 GT:DS:GL:BD 0.84752744 1
1 89896019 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7817;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89896071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0048;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89896089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89896090 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5539;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89896167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0365;AVGPOST=0.9993;RSQ=0.9925;ERATE=0.0004;THETA=0.0009;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 89896202 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7624;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89896243 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8641;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89896329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0382;AVGPOST=0.9988;RSQ=0.9872;ERATE=0.0003;THETA=0.0077;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 89896329 rs79256714 CA C 531 PASS INDEL;BAVGPOST=0.993;BRSQ=0.974;LDAF=0.0964;AVGPOST=0.9801;RSQ=0.9173;ERATE=0.0006;THETA=0.0011;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 89896346 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89896352 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89896369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 89896380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.944;LDAF=0.0731;AVGPOST=0.9921;RSQ=0.9556;ERATE=0.0003;THETA=0.0017;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 89896407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89896454 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5764;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89896462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.854;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9558;ERATE=0.0003;THETA=0.0026;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 89896564 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0133;AVGPOST=0.9988;RSQ=0.9613;ERATE=0.0006;THETA=0.0020;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 89896728 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.893;LDAF=0.0977;AVGPOST=0.9803;RSQ=0.9212;ERATE=0.0004;THETA=0.0022;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 89896731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7129;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89896763 . G GTC 2113 PASS INDEL;BAVGPOST=0.993;BRSQ=0.908;LDAF=0.0254;AVGPOST=0.9903;RSQ=0.8580;ERATE=0.0027;THETA=0.0135;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 89896774 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8297;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89896776 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.8217;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89896783 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5774;ERATE=0.0003;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89896790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.961;LDAF=0.2240;AVGPOST=0.9760;RSQ=0.9500;ERATE=0.0047;THETA=0.0049;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 89896810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.922;LDAF=0.9189;AVGPOST=0.9851;RSQ=0.9331;ERATE=0.0004;THETA=0.0011;AC=2004;AN=2184 GT:DS:GL:BD 0.91758239 1
1 89896825 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.913;LDAF=0.9120;AVGPOST=0.9819;RSQ=0.9233;ERATE=0.0007;THETA=0.0063;AC=1990;AN=2184 GT:DS:GL:BD 0.91117215 1
1 89896827 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6191;ERATE=0.0003;THETA=0.0089;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89896897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.949;LDAF=0.1288;AVGPOST=0.9846;RSQ=0.9575;ERATE=0.0004;THETA=0.0015;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 89896900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.952;LDAF=0.1283;AVGPOST=0.9859;RSQ=0.9608;ERATE=0.0003;THETA=0.0026;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 89896902 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.954;LDAF=0.1284;AVGPOST=0.9856;RSQ=0.9600;ERATE=0.0003;THETA=0.0025;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 89897071 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.891;LDAF=0.0501;AVGPOST=0.9837;RSQ=0.8778;ERATE=0.0060;THETA=0.0064;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 89897110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89897111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89897115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0286;AVGPOST=0.9981;RSQ=0.9755;ERATE=0.0003;THETA=0.0008;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 89897129 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0285;AVGPOST=0.9976;RSQ=0.9713;ERATE=0.0003;THETA=0.0095;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 89897141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89897232 . C CA 2505 PASS INDEL;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9816;ERATE=0.0004;THETA=0.0009;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 89897282 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8509;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89897315 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89897360 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.524;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.5283;ERATE=0.0006;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89897639 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9697;ERATE=0.0003;THETA=0.0051;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89897825 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6246;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89898010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6409;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89898047 . GCT G 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6766;ERATE=0.0004;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89898072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0158;AVGPOST=0.9990;RSQ=0.9780;ERATE=0.0003;THETA=0.0071;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 89898115 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9995;RSQ=0.9846;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 89898166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9906;ERATE=0.0003;THETA=0.0087;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 89898205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0151;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 89898245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9909;ERATE=0.0003;THETA=0.0010;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 89898277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0814;AVGPOST=0.9990;RSQ=0.9941;ERATE=0.0004;THETA=0.0015;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 89898336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0190;AVGPOST=0.9976;RSQ=0.9501;ERATE=0.0003;THETA=0.0033;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 89898357 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8595;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89898817 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8367;ERATE=0.0005;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89898842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0959;AVGPOST=0.9993;RSQ=0.9962;ERATE=0.0004;THETA=0.0044;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 89898907 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89898920 . C CA 7866 PASS INDEL;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0770;AVGPOST=0.9946;RSQ=0.9724;ERATE=0.0004;THETA=0.0014;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 89898924 . AG A 2896 PASS INDEL;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0771;AVGPOST=0.9931;RSQ=0.9662;ERATE=0.0005;THETA=0.0005;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 89898925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0896;AVGPOST=0.9972;RSQ=0.9871;ERATE=0.0003;THETA=0.0054;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 89898956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6110;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89898960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89898996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.783;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8656;ERATE=0.0003;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89899019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1897;AVGPOST=0.9929;RSQ=0.9812;ERATE=0.0005;THETA=0.0012;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 89899028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6545;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89899085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1128;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0003;THETA=0.0007;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 89899106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8911;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89899117 . AC A 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6730;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89899121 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0810;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0011;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 89899170 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0176;AVGPOST=0.9987;RSQ=0.9713;ERATE=0.0004;THETA=0.0014;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 89899233 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0220;AVGPOST=0.9993;RSQ=0.9856;ERATE=0.0004;THETA=0.0011;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 89899285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1087;AVGPOST=0.9980;RSQ=0.9926;ERATE=0.0004;THETA=0.0007;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89899342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0810;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0010;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 89899391 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1079;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0011;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89899393 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0155;AVGPOST=0.9997;RSQ=0.9916;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 89899460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89899510 . G GA 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8420;ERATE=0.0005;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89899517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0806;AVGPOST=0.9988;RSQ=0.9930;ERATE=0.0004;THETA=0.0009;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 89899525 . TAAC T 772 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9265;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89899527 rs35769688 AC A 10329 PASS INDEL;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0802;AVGPOST=0.9971;RSQ=0.9851;ERATE=0.0004;THETA=0.0019;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 89899623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0810;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0008;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 89899652 rs60799136 C CTG 18214 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1107;AVGPOST=0.9947;RSQ=0.9810;ERATE=0.0007;THETA=0.0010;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 89899690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89899772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.509;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7384;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89899930 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6616;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89899981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0811;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 89900014 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6825;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89900018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0810;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0008;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 89900123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8591;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89900129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0003;THETA=0.0009;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89900133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0003;THETA=0.0008;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89900180 rs112253418 A AC 3016 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0189;AVGPOST=0.9989;RSQ=0.9756;ERATE=0.0003;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 89900217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.6350;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89900222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0188;AVGPOST=0.9981;RSQ=0.9608;ERATE=0.0004;THETA=0.0010;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 89900271 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9855;ERATE=0.0003;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89900369 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1079;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0007;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89900424 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.943;LDAF=0.1227;AVGPOST=0.9853;RSQ=0.9508;ERATE=0.0080;THETA=0.0006;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 89900426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.942;LDAF=0.0266;AVGPOST=0.9988;RSQ=0.9838;ERATE=0.0003;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 89900587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0809;AVGPOST=0.9993;RSQ=0.9961;ERATE=0.0003;THETA=0.0009;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 89900599 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0279;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0003;THETA=0.0011;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 89900602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0270;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0009;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 89900641 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5471;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89900673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89900702 rs61128748 C CT 17228 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1094;AVGPOST=0.9971;RSQ=0.9899;ERATE=0.0003;THETA=0.0012;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 89900714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89900734 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0271;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0003;THETA=0.0011;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 89900740 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.4774;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 89900902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0245;AVGPOST=0.9994;RSQ=0.9894;ERATE=0.0003;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 89901069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6046;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89901070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89901080 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89901136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89901223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1087;AVGPOST=0.9982;RSQ=0.9926;ERATE=0.0005;THETA=0.0008;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 89901268 . CCT C 103 PASS INDEL;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7709;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89901274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.7992;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89901277 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9659;ERATE=0.0003;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89901357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0271;AVGPOST=0.9995;RSQ=0.9916;ERATE=0.0004;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 89901384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.607;LDAF=0.9951;AVGPOST=0.9974;RSQ=0.7793;ERATE=0.0003;THETA=0.0007;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 89901426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0378;AVGPOST=0.9991;RSQ=0.9889;ERATE=0.0003;THETA=0.0010;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 89901429 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8096;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89901519 . C CAAG 1318 PASS INDEL;BAVGPOST=0.976;BRSQ=0.662;LDAF=0.0518;AVGPOST=0.9597;RSQ=0.7061;ERATE=0.0100;THETA=0.0009;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 89901534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8369;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89901744 . TAACTC T 4974 PASS INDEL;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0266;AVGPOST=0.9989;RSQ=0.9834;ERATE=0.0003;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 89901783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0284;AVGPOST=0.9994;RSQ=0.9906;ERATE=0.0003;THETA=0.0009;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 89901798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1080;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0004;THETA=0.0007;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89901879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0812;AVGPOST=0.9991;RSQ=0.9947;ERATE=0.0004;THETA=0.0008;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 89902001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1079;AVGPOST=0.9993;RSQ=0.9970;ERATE=0.0004;THETA=0.0008;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89902266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7980;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89902297 . AAC A 35 PASS INDEL;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0082;AVGPOST=0.9930;RSQ=0.6739;ERATE=0.0036;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89902376 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89902463 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89902522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7363;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89902589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.934;LDAF=0.0337;AVGPOST=0.9960;RSQ=0.9528;ERATE=0.0005;THETA=0.0007;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 89902590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0160;AVGPOST=0.9989;RSQ=0.9659;ERATE=0.0004;THETA=0.0013;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 89902646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4046;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89902697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0058;AVGPOST=0.9990;RSQ=0.9324;ERATE=0.0004;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89902955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.7902;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89903017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8817;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89903071 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6847;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89903108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89903109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0809;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0009;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 89903121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5491;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89903164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0803;AVGPOST=0.9993;RSQ=0.9965;ERATE=0.0003;THETA=0.0019;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 89903341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89903351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1079;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0003;THETA=0.0009;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89903437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0272;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0003;THETA=0.0009;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 89903506 . CATTTT C 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5149;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89903568 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89903628 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.895;LDAF=0.0273;AVGPOST=0.9957;RSQ=0.9440;ERATE=0.0004;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 89903644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1080;AVGPOST=0.9990;RSQ=0.9955;ERATE=0.0004;THETA=0.0018;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89903714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6007;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89903729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0814;AVGPOST=0.9989;RSQ=0.9924;ERATE=0.0004;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 89903804 . AG A 157 PASS INDEL;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8069;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89903921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6783;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89903925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8342;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89904114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1159;AVGPOST=0.9959;RSQ=0.9838;ERATE=0.0007;THETA=0.0008;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 89904197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7419;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89904200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1077;AVGPOST=0.9991;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 89904334 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.611;LDAF=0.9740;AVGPOST=0.9750;RSQ=0.6099;ERATE=0.0045;THETA=0.0006;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 89904424 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7042;ERATE=0.0006;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89904513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4828;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89904545 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5574;AVGPOST=0.9956;RSQ=0.9927;ERATE=0.0004;THETA=0.0007;AC=1220;AN=2184 GT:DS:GL:BD 0.55860806 1
1 89904547 . G GA 6755 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1072;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0003;THETA=0.0008;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 89904548 rs59459739 A AG 19663 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1077;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0004;THETA=0.0010;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 89904593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.966;LDAF=0.0366;AVGPOST=0.9964;RSQ=0.9652;ERATE=0.0004;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 89904621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1076;AVGPOST=0.9981;RSQ=0.9932;ERATE=0.0004;THETA=0.0009;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89904668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.779;LDAF=0.0157;AVGPOST=0.9920;RSQ=0.8082;ERATE=0.0005;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 89904753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89904920 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7787;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89905050 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0259;AVGPOST=0.9987;RSQ=0.9784;ERATE=0.0005;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 89905174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89905176 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4930;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89905233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1083;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89905346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.9060;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89905382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.975;LDAF=0.0828;AVGPOST=0.9947;RSQ=0.9738;ERATE=0.0009;THETA=0.0007;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 89905433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7924;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89905752 . CAA C 56 PASS INDEL;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6546;ERATE=0.0008;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89905805 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0273;AVGPOST=0.9992;RSQ=0.9878;ERATE=0.0003;THETA=0.0011;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 89906094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89906130 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7473;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89906282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0245;AVGPOST=0.9995;RSQ=0.9913;ERATE=0.0003;THETA=0.0009;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 89906358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6848;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89906462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.9061;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89906524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89906572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1069;AVGPOST=0.9973;RSQ=0.9890;ERATE=0.0006;THETA=0.0007;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 89906826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89906947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0009;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89907069 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1077;AVGPOST=0.9991;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89907079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0808;AVGPOST=0.9993;RSQ=0.9955;ERATE=0.0003;THETA=0.0008;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 89907460 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8138;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89907483 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4947;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89907542 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8478;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89907708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1159;AVGPOST=0.9984;RSQ=0.9936;ERATE=0.0004;THETA=0.0003;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 89907728 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0815;AVGPOST=0.9983;RSQ=0.9910;ERATE=0.0004;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 89907734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6909;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89907850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89907901 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0055;AVGPOST=0.9972;RSQ=0.8237;ERATE=0.0004;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89908094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.8311;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89908122 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89908135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6724;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89908177 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6964;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89908210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0085;AVGPOST=0.9991;RSQ=0.9570;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 89908263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.539;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6583;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89908292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8503;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89908302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7217;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89908304 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6487;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89908324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.712;LDAF=0.9924;AVGPOST=0.9957;RSQ=0.7739;ERATE=0.0008;THETA=0.0006;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 89908573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1079;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0007;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89908946 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8625;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89909177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0049;AVGPOST=0.9975;RSQ=0.7883;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89909188 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0094;AVGPOST=0.9982;RSQ=0.9269;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89909234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8693;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89909238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0245;AVGPOST=0.9993;RSQ=0.9901;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 89909421 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0275;AVGPOST=0.9989;RSQ=0.9856;ERATE=0.0003;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 89909597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.979;LDAF=0.1115;AVGPOST=0.9944;RSQ=0.9796;ERATE=0.0012;THETA=0.0004;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 89909740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1084;AVGPOST=0.9983;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89909915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8026;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89910030 . C CATT 4097 PASS INDEL;BAVGPOST=0.996;BRSQ=0.956;LDAF=0.0350;AVGPOST=0.9930;RSQ=0.9183;ERATE=0.0005;THETA=0.0004;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 89910053 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0271;AVGPOST=0.9997;RSQ=0.9954;ERATE=0.0003;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 89910113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89910127 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89910216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0813;AVGPOST=0.9992;RSQ=0.9954;ERATE=0.0004;THETA=0.0007;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 89910389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9131;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89910431 . ACTAT A 291 PASS INDEL;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7981;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89910507 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4034;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89910577 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0270;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 89910681 . AT A 121 PASS INDEL;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0035;AVGPOST=0.9957;RSQ=0.4875;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89910714 . AT A 84 PASS INDEL;BAVGPOST=0.991;BRSQ=0.545;LDAF=0.0207;AVGPOST=0.9718;RSQ=0.4694;ERATE=0.0048;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 89910719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89910752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1074;AVGPOST=0.9987;RSQ=0.9953;ERATE=0.0004;THETA=0.0007;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89910766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89910861 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0803;AVGPOST=0.9988;RSQ=0.9929;ERATE=0.0004;THETA=0.0006;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 89910939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7813;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89911100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0255;AVGPOST=0.9997;RSQ=0.9954;ERATE=0.0003;THETA=0.0011;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 89911133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6654;AVGPOST=0.9968;RSQ=0.9949;ERATE=0.0004;THETA=0.0005;AC=1453;AN=2184 GT:DS:GL:BD 0.66529304 1
1 89911247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1080;AVGPOST=0.9993;RSQ=0.9970;ERATE=0.0004;THETA=0.0007;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89911292 . TTTAA T 659 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9250;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89911307 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9481;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 89911387 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0812;AVGPOST=0.9991;RSQ=0.9949;ERATE=0.0004;THETA=0.0011;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 89911389 . A AT 4412 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0285;AVGPOST=0.9963;RSQ=0.9583;ERATE=0.0004;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 89911420 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1091;AVGPOST=0.9993;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 89911469 . A AG 14253 PASS INDEL;BAVGPOST=0.963;BRSQ=0.937;LDAF=0.6254;AVGPOST=0.9359;RSQ=0.9058;ERATE=0.0172;THETA=0.0006;AC=1395;AN=2184 GT:DS:GL:BD 0.63873625 1
1 89911471 rs111948853 G GC 70968 PASS INDEL;BAVGPOST=0.983;BRSQ=0.971;LDAF=0.6648;AVGPOST=0.9949;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 89911510 . GTCAGTGTC G 247 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7359;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89911601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8463;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89911667 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89911748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89911770 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89911833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5771;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89911854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89911901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7697;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89912099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5577;AVGPOST=0.9968;RSQ=0.9953;ERATE=0.0007;THETA=0.0004;AC=1217;AN=2184 GT:DS:GL:BD 0.55723441 1
1 89912120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89912245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89912287 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1080;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0004;THETA=0.0005;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 89912290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5403;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89912449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5491;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89912485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89912628 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5406;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 89912629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6285;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89912693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.6570;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89912740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9661;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 89912813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7359;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89912820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89912842 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6355;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89912905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89913027 . AC A 1534 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0094;AVGPOST=0.9983;RSQ=0.9316;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89913111 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1160;AVGPOST=0.9989;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 89913182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5964;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89913273 . GGT G 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89913280 . C CTG 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89913408 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5370;AVGPOST=0.9975;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=1174;AN=2184 GT:DS:GL:BD 0.53754580 1
1 89913480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9944;AVGPOST=0.9998;RSQ=0.9806;ERATE=0.0004;THETA=0.0007;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89913564 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89913629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0270;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 89913632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7092;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89913635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9225;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89913657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89913703 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6618;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89913732 . T TA 43 PASS INDEL;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7128;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89913763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8590;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89913817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89913925 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8410;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89914037 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9943;AVGPOST=0.9996;RSQ=0.9657;ERATE=0.0004;THETA=0.0005;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89914039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7384;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89914156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6472;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89914202 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7864;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89914296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5594;AVGPOST=0.9955;RSQ=0.9930;ERATE=0.0004;THETA=0.0005;AC=1223;AN=2184 GT:DS:GL:BD 0.55998170 1
1 89914594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89914633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0003;AVGPOST=0.9997;RSQ=0.6498;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 89914699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7915;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89914724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=0.9987;RSQ=0.9787;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 89914756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4905;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89914872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.875;LDAF=0.0203;AVGPOST=0.9964;RSQ=0.9321;ERATE=0.0004;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 89914898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.820;LDAF=0.0085;AVGPOST=0.9976;RSQ=0.8719;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89914917 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9940;AVGPOST=0.9989;RSQ=0.9098;ERATE=0.0006;THETA=0.0008;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89914926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0269;AVGPOST=0.9980;RSQ=0.9745;ERATE=0.0003;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 89914930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0273;AVGPOST=0.9978;RSQ=0.9699;ERATE=0.0004;THETA=0.0010;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 89914940 rs34484909 CA C 78144 PASS INDEL;BAVGPOST=0.996;BRSQ=0.762;LDAF=0.9907;AVGPOST=0.9938;RSQ=0.7495;ERATE=0.0013;THETA=0.0007;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 89914987 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.8054;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89915097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8151;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89915139 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89915267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9943;AVGPOST=0.9996;RSQ=0.9653;ERATE=0.0004;THETA=0.0009;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89915287 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8257;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89915389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9944;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0008;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89915444 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9939;AVGPOST=0.9988;RSQ=0.9233;ERATE=0.0003;THETA=0.0005;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89915549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9942;AVGPOST=0.9995;RSQ=0.9546;ERATE=0.0004;THETA=0.0007;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89915567 . A AG 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89915624 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0082;AVGPOST=0.9983;RSQ=0.9267;ERATE=0.0004;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 89916048 rs113818379 GTA G 57673 PASS INDEL;BAVGPOST=0.991;BRSQ=0.672;LDAF=0.9740;AVGPOST=0.9679;RSQ=0.5111;ERATE=0.0039;THETA=0.0007;AC=2155;AN=2184 GT:DS:GL:BD 0.98672163 1
1 89916100 . C CAT 21 PASS INDEL;BAVGPOST=0.998;BRSQ=0.570;LDAF=0.0065;AVGPOST=0.9904;RSQ=0.4353;ERATE=0.0009;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89916126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.6090;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89916127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0187;AVGPOST=0.9991;RSQ=0.9789;ERATE=0.0003;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 89916177 . CTT C 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4608;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89916200 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8252;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89916262 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6572;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89916272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0020;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 89916363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5326;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89916527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9552;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89916717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89916746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6442;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89916755 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0073;AVGPOST=0.9983;RSQ=0.9233;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89916800 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9816;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89916992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.682;LDAF=0.9891;AVGPOST=0.9918;RSQ=0.6945;ERATE=0.0015;THETA=0.0007;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 89916993 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9942;AVGPOST=0.9994;RSQ=0.9474;ERATE=0.0005;THETA=0.0005;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89917083 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9944;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0005;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89917120 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89917253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5443;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89917284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89917290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.9020;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 89917322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7513;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89917331 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9944;AVGPOST=0.9997;RSQ=0.9730;ERATE=0.0003;THETA=0.0004;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89917415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7929;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89917509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.611;LDAF=0.0035;AVGPOST=0.9968;RSQ=0.6909;ERATE=0.0006;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89917630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7148;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89917694 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7534;ERATE=0.0011;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89917702 . AG A 2345 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0160;AVGPOST=0.9989;RSQ=0.9684;ERATE=0.0004;THETA=0.0010;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 89917784 . A AC 29 PASS INDEL;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5089;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89917792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.885;LDAF=0.0146;AVGPOST=0.9943;RSQ=0.8683;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 89917844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9943;AVGPOST=0.9996;RSQ=0.9657;ERATE=0.0004;THETA=0.0005;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89917862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9716;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89917883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7380;ERATE=0.0008;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89917985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9944;AVGPOST=0.9997;RSQ=0.9725;ERATE=0.0003;THETA=0.0006;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89918030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9945;AVGPOST=0.9998;RSQ=0.9841;ERATE=0.0003;THETA=0.0010;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89918319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.7956;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89918362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8799;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89918456 . G GT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5175;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89918461 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89918563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.1676;AVGPOST=0.9902;RSQ=0.9730;ERATE=0.0005;THETA=0.0007;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 89918713 . AAC A 24959 PASS INDEL;BAVGPOST=0.955;BRSQ=0.620;LDAF=0.9340;AVGPOST=0.9251;RSQ=0.5364;ERATE=0.0078;THETA=0.0009;AC=2081;AN=2184 GT:DS:GL:BD 0.95283884 1
1 89918770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7095;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89918778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9629;ERATE=0.0003;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89918785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89918957 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89919049 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8313;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89919055 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89919108 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.7116;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89919121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8987;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89919224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.969;LDAF=0.0774;AVGPOST=0.9964;RSQ=0.9806;ERATE=0.0005;THETA=0.0008;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 89919368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89919513 . G GT 550 PASS INDEL;BAVGPOST=0.957;BRSQ=0.548;LDAF=0.0778;AVGPOST=0.9101;RSQ=0.4933;ERATE=0.0206;THETA=0.0009;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 89919624 . TTAAAAA T 230 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.2784;ERATE=0.0004;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 89919676 . GAT G 85 PASS INDEL;BAVGPOST=0.995;BRSQ=0.636;LDAF=0.0092;AVGPOST=0.9889;RSQ=0.5319;ERATE=0.0016;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89919704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.8775;AVGPOST=0.9766;RSQ=0.9235;ERATE=0.0022;THETA=0.0007;AC=1927;AN=2184 GT:DS:GL:BD 0.88232601 1
1 89919716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4145;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89919755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89919950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0249;AVGPOST=0.9995;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 89919979 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89919982 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7234;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89920026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7736;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89920035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0805;AVGPOST=0.9986;RSQ=0.9938;ERATE=0.0003;THETA=0.0005;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 89920078 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0376;AVGPOST=0.9990;RSQ=0.9884;ERATE=0.0004;THETA=0.0007;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 89920088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6898;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89920133 . AGT A 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5929;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89920291 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89920437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0248;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 89920575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.8897;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0006;AC=1945;AN=2184 GT:DS:GL:BD 0.89056778 1
1 89920821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.9260;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89920827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89920829 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7877;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89920862 rs34840663 TATC T 7685 PASS INDEL;BAVGPOST=0.993;BRSQ=0.955;LDAF=0.0804;AVGPOST=0.9975;RSQ=0.9860;ERATE=0.0004;THETA=0.0007;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 89920880 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0142;AVGPOST=0.9977;RSQ=0.9354;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 89920918 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0076;AVGPOST=0.9972;RSQ=0.8550;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 89921003 . TC T 68 PASS INDEL;BAVGPOST=0.998;BRSQ=0.715;LDAF=0.0052;AVGPOST=0.9947;RSQ=0.5467;ERATE=0.0024;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89921025 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4854;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89921057 . CATA C 3970 PASS INDEL;BAVGPOST=0.986;BRSQ=0.866;LDAF=0.0481;AVGPOST=0.9912;RSQ=0.9256;ERATE=0.0005;THETA=0.0003;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 89921117 . TTATA T 10994 PASS INDEL;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.2126;AVGPOST=0.9818;RSQ=0.9593;ERATE=0.0015;THETA=0.0012;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 89921164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.933;LDAF=0.8486;AVGPOST=0.9266;RSQ=0.7897;ERATE=0.0074;THETA=0.0006;AC=1890;AN=2184 GT:DS:GL:BD 0.86538464 1
1 89921173 . ATTAT A 1370 PASS INDEL;BAVGPOST=0.995;BRSQ=0.943;LDAF=0.0391;AVGPOST=0.9950;RSQ=0.9424;ERATE=0.0007;THETA=0.0008;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 89921285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.3295;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89921364 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8882;AVGPOST=0.9978;RSQ=0.9921;ERATE=0.0006;THETA=0.0012;AC=1942;AN=2184 GT:DS:GL:BD 0.88919413 1
1 89921574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.7959;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89921575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.6473;AVGPOST=0.9941;RSQ=0.9899;ERATE=0.0004;THETA=0.0006;AC=1414;AN=2184 GT:DS:GL:BD 0.64743590 1
1 89921593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1103;AVGPOST=0.9916;RSQ=0.9687;ERATE=0.0003;THETA=0.0006;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 89921662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5787;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89921740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8892;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0004;THETA=0.0008;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89921844 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6142;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89921893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9174;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89922006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8891;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0004;THETA=0.0008;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89922037 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8869;AVGPOST=0.9968;RSQ=0.9892;ERATE=0.0005;THETA=0.0005;AC=1939;AN=2184 GT:DS:GL:BD 0.88782054 1
1 89922274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89922310 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5697;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89922477 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8893;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0004;THETA=0.0006;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89922541 . T TA 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6473;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89922569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89922762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89922788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 89922809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89922811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6642;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89922926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0248;AVGPOST=0.9996;RSQ=0.9927;ERATE=0.0003;THETA=0.0008;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 89922949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7690;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89922987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8777;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89923061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0043;AVGPOST=0.9967;RSQ=0.7191;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89923199 rs67335461 TAG T 79781 PASS INDEL;BAVGPOST=0.986;BRSQ=0.974;LDAF=0.6458;AVGPOST=0.9852;RSQ=0.9768;ERATE=0.0004;THETA=0.0006;AC=1416;AN=2184 GT:DS:GL:BD 0.64835167 1
1 89923202 rs55716444 AG A 10428 PASS INDEL;BAVGPOST=0.935;BRSQ=0.889;LDAF=0.5678;AVGPOST=0.8818;RSQ=0.8413;ERATE=0.0323;THETA=0.0007;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 89923203 rs55716444 GAA G 17206 PASS INDEL;BAVGPOST=0.986;BRSQ=0.973;LDAF=0.6379;AVGPOST=0.9734;RSQ=0.9576;ERATE=0.0032;THETA=0.0010;AC=1400;AN=2184 GT:DS:GL:BD 0.64102566 1
1 89923249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89923300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9944;AVGPOST=0.9997;RSQ=0.9728;ERATE=0.0004;THETA=0.0003;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89923324 . AT A 31446 PASS INDEL;BAVGPOST=0.992;BRSQ=0.967;LDAF=0.8785;AVGPOST=0.9818;RSQ=0.9401;ERATE=0.0022;THETA=0.0002;AC=1929;AN=2184 GT:DS:GL:BD 0.88324177 1
1 89923358 . GC G 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.4166;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89923506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0127;AVGPOST=0.9981;RSQ=0.9398;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89923526 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.9930;AVGPOST=0.9978;RSQ=0.8662;ERATE=0.0005;THETA=0.0008;AC=2170;AN=2184 GT:DS:GL:BD 0.99358976 1
1 89923592 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0249;AVGPOST=0.9991;RSQ=0.9846;ERATE=0.0004;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 89923608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.936;LDAF=0.8691;AVGPOST=0.9633;RSQ=0.8885;ERATE=0.0050;THETA=0.0007;AC=1921;AN=2184 GT:DS:GL:BD 0.87957877 1
1 89923801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0250;AVGPOST=0.9992;RSQ=0.9874;ERATE=0.0003;THETA=0.0010;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 89923845 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7400;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89924072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0816;AVGPOST=0.9985;RSQ=0.9918;ERATE=0.0004;THETA=0.0008;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 89924195 . GCTAGAT G 696 PASS INDEL;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0045;AVGPOST=0.9971;RSQ=0.7675;ERATE=0.0008;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89924339 rs11354579 TA T 81618 PASS INDEL;BAVGPOST=0.994;BRSQ=0.972;LDAF=0.8824;AVGPOST=0.9876;RSQ=0.9556;ERATE=0.0036;THETA=0.0009;AC=1934;AN=2184 GT:DS:GL:BD 0.88553113 1
1 89924342 . AT A 44621 PASS INDEL;BAVGPOST=1.000;BRSQ=0;LDAF=0.9996;AVGPOST=0.9992;RSQ=0.0603;ERATE=0.0004;THETA=0.0005;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 89924362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0255;AVGPOST=0.9979;RSQ=0.9669;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 89924436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.584;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89924491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5142;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89924522 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.687;LDAF=0.0054;AVGPOST=0.9969;RSQ=0.7636;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89924661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0086;AVGPOST=0.9983;RSQ=0.9261;ERATE=0.0003;THETA=0.0015;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 89924772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9475;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89924938 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3901;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89924968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6996;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89925136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89925490 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8895;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0004;THETA=0.0006;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89925639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9944;AVGPOST=0.9997;RSQ=0.9728;ERATE=0.0004;THETA=0.0005;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89925761 . CT C 153 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6959;ERATE=0.0006;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89925983 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89926052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0805;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0008;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 89926088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6039;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89926140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8898;AVGPOST=0.9988;RSQ=0.9955;ERATE=0.0005;THETA=0.0008;AC=1945;AN=2184 GT:DS:GL:BD 0.89056778 1
1 89926208 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8893;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0008;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89926278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7023;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89926498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9692;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89926537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89926573 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8508;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89926706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8894;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0009;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89926757 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89926766 . AAAGG A 586 PASS INDEL;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8956;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89926781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6058;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89926787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89926818 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9945;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0009;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89926830 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89926868 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9349;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89926910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9944;AVGPOST=0.9986;RSQ=0.9007;ERATE=0.0003;THETA=0.0008;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89926912 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8895;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0006;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89927104 rs60645317 A AC 117269 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8895;AVGPOST=0.9986;RSQ=0.9949;ERATE=0.0005;THETA=0.0006;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89927145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0118;AVGPOST=0.9990;RSQ=0.9680;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 89927165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89927189 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8894;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0006;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89927234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8893;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0004;THETA=0.0009;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89927332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89927361 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6531;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89927385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7800;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89927463 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89927507 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9943;AVGPOST=0.9995;RSQ=0.9620;ERATE=0.0004;THETA=0.0009;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89927520 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89927677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8824;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89927727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8893;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0010;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89927947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8878;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89927960 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0038;AVGPOST=0.9993;RSQ=0.9237;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89928044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1423;AVGPOST=0.9924;RSQ=0.9782;ERATE=0.0003;THETA=0.0006;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 89928066 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1646;AVGPOST=0.9974;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 89928083 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8891;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89928190 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8894;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89928281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8086;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89928301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89928306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7511;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89928318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0269;AVGPOST=0.9962;RSQ=0.9506;ERATE=0.0004;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 89928329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89928456 rs66685031 A AAT 70944 PASS INDEL;BAVGPOST=0.990;BRSQ=0.963;LDAF=0.8705;AVGPOST=0.9704;RSQ=0.9026;ERATE=0.0054;THETA=0.0004;AC=1916;AN=2184 GT:DS:GL:BD 0.87728935 1
1 89928482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8866;AVGPOST=0.9966;RSQ=0.9878;ERATE=0.0008;THETA=0.0007;AC=1940;AN=2184 GT:DS:GL:BD 0.88827837 1
1 89928582 . TA T 58 PASS INDEL;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.5889;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89928672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8894;AVGPOST=0.9993;RSQ=0.9969;ERATE=0.0004;THETA=0.0006;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89928820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8894;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89928862 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89928898 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0792;AVGPOST=0.9992;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 89928917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7453;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89928926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.8896;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0004;THETA=0.0006;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89929045 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8195;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89929097 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1162;AVGPOST=0.9975;RSQ=0.9911;ERATE=0.0003;THETA=0.0006;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 89929145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89929248 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9644;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89929325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8894;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=1944;AN=2184 GT:DS:GL:BD 0.89010990 1
1 89929419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6819;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89929425 . CAT C 119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5630;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89929457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89929468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7759;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89929518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5810;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89929520 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0247;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 89929570 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5779;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89929708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89929790 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8307;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89929791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89929840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0247;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 89929849 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8871;AVGPOST=0.9975;RSQ=0.9916;ERATE=0.0004;THETA=0.0003;AC=1939;AN=2184 GT:DS:GL:BD 0.88782054 1
1 89929886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89929900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8880;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0013;AC=1941;AN=2184 GT:DS:GL:BD 0.88873625 1
1 89930024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0113;AVGPOST=0.9964;RSQ=0.8806;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 89930070 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0061;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89930323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6258;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89930324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9237;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89930598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9945;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0006;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89930676 . TA T 1053 PASS INDEL;BAVGPOST=0.975;BRSQ=0.620;LDAF=0.0491;AVGPOST=0.9479;RSQ=0.5723;ERATE=0.0111;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 89930684 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.983;LDAF=0.5503;AVGPOST=0.9883;RSQ=0.9819;ERATE=0.0010;THETA=0.0003;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 89930773 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0247;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 89930803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89930890 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6205;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89930976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89931229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8436;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89931242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89931292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0248;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0003;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 89931309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89931328 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0080;AVGPOST=0.9992;RSQ=0.9584;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 89931422 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8447;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89931449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6440;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89931451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89931461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6912;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=1511;AN=2184 GT:DS:GL:BD 0.69184983 1
1 89931476 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89931578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89931657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1700;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 89931661 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0248;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 89931889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.923;LDAF=0.0306;AVGPOST=0.9935;RSQ=0.9236;ERATE=0.0004;THETA=0.0008;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 89931890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89931915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89932275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0806;AVGPOST=0.9993;RSQ=0.9957;ERATE=0.0005;THETA=0.0006;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 89932421 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9941;AVGPOST=0.9991;RSQ=0.9358;ERATE=0.0003;THETA=0.0005;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 89932476 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0061;AVGPOST=0.9981;RSQ=0.8747;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89932508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0808;AVGPOST=0.9992;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 89932632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89932945 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0051;AVGPOST=0.9993;RSQ=0.9427;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89933070 . G GA 17 PASS INDEL;BAVGPOST=0.995;BRSQ=0.598;LDAF=0.0112;AVGPOST=0.9874;RSQ=0.5657;ERATE=0.0019;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 89933190 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9347;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89933295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89933402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0038;AVGPOST=0.9967;RSQ=0.6275;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89933408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.4783;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89933522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.945;LDAF=0.1657;AVGPOST=0.9896;RSQ=0.9725;ERATE=0.0012;THETA=0.0003;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 89933579 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.899;LDAF=0.0313;AVGPOST=0.9852;RSQ=0.8193;ERATE=0.0018;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 89933607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.367;LDAF=0.9327;AVGPOST=0.9098;RSQ=0.4320;ERATE=0.0060;THETA=0.0003;AC=2098;AN=2184 GT:DS:GL:BD 0.96062273 1
1 89933828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1669;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 89934004 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.754;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8544;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89934304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8100;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89934380 . C CT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5981;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89934509 . CTCGT C 135 PASS INDEL;BAVGPOST=0.998;BRSQ=0.756;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7239;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89934684 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.8747;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 89934791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8845;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89934817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0069;AVGPOST=0.9983;RSQ=0.8919;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89935081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7335;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89935101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5768;AVGPOST=0.9955;RSQ=0.9926;ERATE=0.0006;THETA=0.0004;AC=1261;AN=2184 GT:DS:GL:BD 0.57738096 1
1 89935103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89935104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7285;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89935128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.7130;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89935415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7705;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89935489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1103;AVGPOST=0.9921;RSQ=0.9717;ERATE=0.0007;THETA=0.0007;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 89935557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89935968 . CTT C 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5148;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89936127 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.743;LDAF=0.0093;AVGPOST=0.9946;RSQ=0.7745;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89936140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1643;AVGPOST=0.9979;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 89936183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7211;AVGPOST=0.9923;RSQ=0.9865;ERATE=0.0008;THETA=0.0045;AC=1576;AN=2184 GT:DS:GL:BD 0.72161174 1
1 89936279 . TA T 10 PASS INDEL;BAVGPOST=0.997;BRSQ=0.494;LDAF=0.0050;AVGPOST=0.9944;RSQ=0.5566;ERATE=0.0011;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89936292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5973;ERATE=0.0004;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89936332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.6346;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89936363 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0249;AVGPOST=0.9984;RSQ=0.9744;ERATE=0.0004;THETA=0.0038;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 89936417 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.4957;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89936570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8499;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89936834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89936835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0257;AVGPOST=0.9969;RSQ=0.9566;ERATE=0.0004;THETA=0.0031;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 89936854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89936903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6159;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89936945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7105;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89937046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0237;AVGPOST=0.9988;RSQ=0.9797;ERATE=0.0004;THETA=0.0021;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 89937074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5755;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89937101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9190;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89937400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4182;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89937467 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6542;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89937701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5091;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89937854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1646;AVGPOST=0.9968;RSQ=0.9919;ERATE=0.0007;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 89937868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0037;AVGPOST=0.9992;RSQ=0.9042;ERATE=0.0003;THETA=0.0159;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89937916 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5977;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89937952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89937963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89937987 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1694;AVGPOST=0.9979;RSQ=0.9947;ERATE=0.0005;THETA=0.0005;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 89938073 . CAT C 330 PASS INDEL;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7040;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89938096 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1679;AVGPOST=0.9981;RSQ=0.9950;ERATE=0.0004;THETA=0.0013;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 89938187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0254;AVGPOST=0.9995;RSQ=0.9922;ERATE=0.0003;THETA=0.0079;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 89938197 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89938325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.952;LDAF=0.6315;AVGPOST=0.9572;RSQ=0.9320;ERATE=0.0202;THETA=0.0036;AC=1383;AN=2184 GT:DS:GL:BD 0.63324177 1
1 89938418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.9813;AVGPOST=0.9981;RSQ=0.9601;ERATE=0.0003;THETA=0.0051;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 89938447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5865;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89938457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8231;ERATE=0.0003;THETA=0.0040;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89938504 rs35443419 CA C 26943 PASS INDEL;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1668;AVGPOST=0.9969;RSQ=0.9923;ERATE=0.0005;THETA=0.0004;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 89938548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0003;THETA=0.0050;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89938569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9496;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89938575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6322;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89938587 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89938662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.5959;AVGPOST=0.9901;RSQ=0.9849;ERATE=0.0008;THETA=0.0006;AC=1303;AN=2184 GT:DS:GL:BD 0.59661174 1
1 89938717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0280;AVGPOST=0.9972;RSQ=0.9661;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 89938735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8756;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89938759 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8557;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89938776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89938790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8939;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89938818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.5775;ERATE=0.0019;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89938846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6431;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89938904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7147;ERATE=0.0006;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89938975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8206;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89939064 rs113729995 ACT A 502 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8656;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89939116 . AG A 334 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0040;AVGPOST=0.9978;RSQ=0.7990;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89939135 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.5960;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89939150 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89939178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7696;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89939508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0269;AVGPOST=0.9991;RSQ=0.9877;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 89939641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7960;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89939818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9676;AVGPOST=0.9985;RSQ=0.9790;ERATE=0.0006;THETA=0.0005;AC=2114;AN=2184 GT:DS:GL:BD 0.96794873 1
1 89939888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.844;LDAF=0.0093;AVGPOST=0.9972;RSQ=0.8824;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 89940077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89940137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8548;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89940229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89940415 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89940451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.9033;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89940458 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89940476 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8269;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89940511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1681;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0004;THETA=0.0012;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 89940557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0068;AVGPOST=0.9988;RSQ=0.9238;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89940673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.810;LDAF=0.9442;AVGPOST=0.9708;RSQ=0.7975;ERATE=0.0055;THETA=0.0007;AC=2079;AN=2184 GT:DS:GL:BD 0.95192307 1
1 89940705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6418;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89940717 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6291;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89940848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9008;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89940936 . A AC 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5316;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89941041 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89941108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89941284 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0268;AVGPOST=0.9992;RSQ=0.9881;ERATE=0.0003;THETA=0.0009;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 89941330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0088;AVGPOST=0.9996;RSQ=0.9783;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89941346 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1684;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0004;THETA=0.0022;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 89941454 . A AC 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89941526 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9688;AVGPOST=0.9996;RSQ=0.9945;ERATE=0.0003;THETA=0.0008;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 89941533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5834;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0003;THETA=0.0008;AC=1274;AN=2184 GT:DS:GL:BD 0.58333331 1
1 89941570 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89941592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5170;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89941594 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89941732 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7320;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89941745 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0202;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89941798 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6583;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89941809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89941846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8196;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89941919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89942001 . GAC G 33 PASS INDEL;BAVGPOST=0.997;BRSQ=0.627;LDAF=0.0107;AVGPOST=0.9857;RSQ=0.5096;ERATE=0.0023;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 89942009 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0203;AVGPOST=0.9995;RSQ=0.9883;ERATE=0.0004;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89942199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8651;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89942374 . A AAAG 91 PASS INDEL;BAVGPOST=0.942;BRSQ=0.266;LDAF=0.1005;AVGPOST=0.8495;RSQ=0.3486;ERATE=0.0151;THETA=0.0003;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 89942440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7089;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89942504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.9688;AVGPOST=0.9995;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 89942624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9687;AVGPOST=0.9993;RSQ=0.9899;ERATE=0.0004;THETA=0.0008;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 89942768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89942975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89943035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1685;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 89943044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8633;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89943104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1685;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 89943135 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1678;AVGPOST=0.9977;RSQ=0.9946;ERATE=0.0004;THETA=0.0009;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 89943209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9622;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89943230 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89943466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89943467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.5996;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89943493 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0122;AVGPOST=0.9988;RSQ=0.9549;ERATE=0.0004;THETA=0.0021;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 89943497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7181;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89943550 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89943584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0203;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89943585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5828;AVGPOST=0.9971;RSQ=0.9953;ERATE=0.0005;THETA=0.0007;AC=1272;AN=2184 GT:DS:GL:BD 0.58241761 1
1 89943673 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4280;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89943708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1688;AVGPOST=0.9983;RSQ=0.9956;ERATE=0.0003;THETA=0.0010;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 89943796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0058;AVGPOST=0.9963;RSQ=0.7755;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 89943885 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0375;AVGPOST=0.9995;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 89943922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89943989 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0377;AVGPOST=0.9993;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 89944254 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4911;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89944302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.9017;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89944337 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89944343 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89944373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89944446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89944522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.858;LDAF=0.0132;AVGPOST=0.9974;RSQ=0.9133;ERATE=0.0006;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89944725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0377;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 89944737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89944791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9621;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89944840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89945219 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.9012;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89945373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0203;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0003;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89945448 . AT A 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7492;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89945488 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5749;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89945583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1330;AVGPOST=0.9979;RSQ=0.9934;ERATE=0.0004;THETA=0.0005;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 89945641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9206;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89945661 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6301;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89945690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1701;AVGPOST=0.9965;RSQ=0.9908;ERATE=0.0005;THETA=0.0005;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 89945964 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9179;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89946052 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89946090 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9686;AVGPOST=0.9995;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=2115;AN=2184 GT:DS:GL:BD 0.96840662 1
1 89946096 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0203;AVGPOST=0.9995;RSQ=0.9887;ERATE=0.0003;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89946286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0110;AVGPOST=0.9988;RSQ=0.9580;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 89946479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8069;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89946528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4140;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89946557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89946819 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8706;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89946952 rs35437856 CTT C 69209 PASS INDEL;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.6264;AVGPOST=0.9804;RSQ=0.9699;ERATE=0.0050;THETA=0.0006;AC=1370;AN=2184 GT:DS:GL:BD 0.62728935 1
1 89947039 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1335;AVGPOST=0.9988;RSQ=0.9963;ERATE=0.0004;THETA=0.0016;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 89947057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8328;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89947194 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1338;AVGPOST=0.9981;RSQ=0.9940;ERATE=0.0005;THETA=0.0004;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 89947314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2194;AVGPOST=0.9965;RSQ=0.9915;ERATE=0.0005;THETA=0.0005;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 89947328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0063;AVGPOST=0.9986;RSQ=0.9004;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89947493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5852;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=1278;AN=2184 GT:DS:GL:BD 0.58516484 1
1 89947517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8100;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89947517 . AC A 42635 PASS INDEL;BAVGPOST=0.987;BRSQ=0.675;LDAF=0.9684;AVGPOST=0.9660;RSQ=0.5640;ERATE=0.0116;THETA=0.0003;AC=2136;AN=2184 GT:DS:GL:BD 0.97802198 1
1 89947530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89947732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6707;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89947807 . C CA 5356 PASS INDEL;BAVGPOST=0.974;BRSQ=0.821;LDAF=0.0659;AVGPOST=0.9698;RSQ=0.8154;ERATE=0.0023;THETA=0.0010;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 89947934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89947983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89948247 . CAT C 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89948262 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0079;AVGPOST=0.9975;RSQ=0.8751;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89948492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.9685;AVGPOST=0.9993;RSQ=0.9913;ERATE=0.0004;THETA=0.0005;AC=2115;AN=2184 GT:DS:GL:BD 0.96840662 1
1 89948530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89948758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89948844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2199;AVGPOST=0.9978;RSQ=0.9948;ERATE=0.0004;THETA=0.0006;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 89948857 . AT A 1037 PASS INDEL;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0076;AVGPOST=0.9981;RSQ=0.8983;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89948950 rs76346698 G GGA 29028 PASS INDEL;BAVGPOST=0.990;BRSQ=0.973;LDAF=0.1671;AVGPOST=0.9934;RSQ=0.9844;ERATE=0.0004;THETA=0.0004;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 89948951 . G GAA 9619 PASS INDEL;BAVGPOST=0.990;BRSQ=0.974;LDAF=0.1672;AVGPOST=0.9929;RSQ=0.9827;ERATE=0.0005;THETA=0.0006;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 89948952 . A ACT 19 PASS INDEL;BAVGPOST=0.992;BRSQ=0.528;LDAF=0.0093;AVGPOST=0.9888;RSQ=0.5266;ERATE=0.0013;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89949005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8430;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89949037 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9865;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89949137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8131;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89949213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6293;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=1375;AN=2184 GT:DS:GL:BD 0.62957877 1
1 89949404 . ATATT A 241 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4786;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89949459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0073;AVGPOST=0.9979;RSQ=0.8872;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89949505 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7601;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89949534 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89949604 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.7982;AVGPOST=0.9956;RSQ=0.9898;ERATE=0.0016;THETA=0.0002;AC=1744;AN=2184 GT:DS:GL:BD 0.79853481 1
1 89949771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8129;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89949786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.9679;AVGPOST=0.9989;RSQ=0.9866;ERATE=0.0004;THETA=0.0003;AC=2114;AN=2184 GT:DS:GL:BD 0.96794873 1
1 89949798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9685;AVGPOST=0.9991;RSQ=0.9892;ERATE=0.0004;THETA=0.0006;AC=2115;AN=2184 GT:DS:GL:BD 0.96840662 1
1 89949811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9996;RSQ=0.9839;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 89949885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9676;AVGPOST=0.9985;RSQ=0.9825;ERATE=0.0004;THETA=0.0004;AC=2113;AN=2184 GT:DS:GL:BD 0.96749085 1
1 89949916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7473;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89949931 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6588;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89950070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0204;AVGPOST=0.9994;RSQ=0.9866;ERATE=0.0004;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89950181 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89950641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89950773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1330;AVGPOST=0.9979;RSQ=0.9946;ERATE=0.0004;THETA=0.0006;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 89950851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7780;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89950932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89951024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89951072 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5229;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89951324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8304;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89951384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.898;LDAF=0.0295;AVGPOST=0.9994;RSQ=0.9913;ERATE=0.0004;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 89951392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0060;AVGPOST=0.9991;RSQ=0.9382;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89951393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0207;AVGPOST=0.9994;RSQ=0.9861;ERATE=0.0004;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 89951553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89951928 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89951940 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1674;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 89952058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9991;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89952368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8847;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89952409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9736;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89952440 . AGAG A 2095 PASS INDEL;BAVGPOST=0.972;BRSQ=0.888;LDAF=0.1270;AVGPOST=0.9665;RSQ=0.8946;ERATE=0.0005;THETA=0.0005;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 89952441 rs71690002 GAGGA G 17283 PASS INDEL;BAVGPOST=0.982;BRSQ=0.937;LDAF=0.1547;AVGPOST=0.9951;RSQ=0.9860;ERATE=0.0004;THETA=0.0004;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 89952547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9982;RSQ=0.9120;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89952557 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6574;AVGPOST=0.9964;RSQ=0.9941;ERATE=0.0007;THETA=0.0005;AC=1435;AN=2184 GT:DS:GL:BD 0.65705127 1
1 89952561 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.6135;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89952607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9542;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89952889 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1688;AVGPOST=0.9979;RSQ=0.9945;ERATE=0.0004;THETA=0.0006;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 89952892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0386;AVGPOST=0.9995;RSQ=0.9942;ERATE=0.0003;THETA=0.0001;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 89952901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.914;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89952988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6846;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89952989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5592;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89953018 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5574;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89953134 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5845;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89953137 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.928;LDAF=0.0336;AVGPOST=0.9921;RSQ=0.9098;ERATE=0.0007;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 89953145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5425;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89953147 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6782;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89953411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9986;RSQ=0.9471;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 89953416 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.1339;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 89953428 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6837;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89953544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6129;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0010;AC=1339;AN=2184 GT:DS:GL:BD 0.61309522 1
1 89953574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89953607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7354;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89953609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9689;AVGPOST=0.9989;RSQ=0.9861;ERATE=0.0003;THETA=0.0003;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 89953708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9031;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89953758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7426;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89953768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89953829 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0390;AVGPOST=0.9987;RSQ=0.9869;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 89953893 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89953909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9848;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89954039 . AG A 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6696;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89954165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9367;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89954181 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89954247 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0189;AVGPOST=0.9989;RSQ=0.9774;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 89954278 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89954297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89954394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89954395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7952;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89954445 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7319;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89954637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8754;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89954775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89955188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5850;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0004;THETA=0.0017;AC=1278;AN=2184 GT:DS:GL:BD 0.58516484 1
1 89955216 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9185;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89955334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7948;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=1737;AN=2184 GT:DS:GL:BD 0.79532969 1
1 89955530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7942;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=1735;AN=2184 GT:DS:GL:BD 0.79441392 1
1 89955626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89955642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0073;AVGPOST=0.9987;RSQ=0.9356;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 89955665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6309;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89955680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9989;RSQ=0.9562;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89955750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9993;RSQ=0.9551;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89955756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8369;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89955783 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1333;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 89955805 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9689;AVGPOST=0.9990;RSQ=0.9857;ERATE=0.0004;THETA=0.0003;AC=2117;AN=2184 GT:DS:GL:BD 0.96932232 1
1 89956299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.689;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9140;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89956312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1332;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 89956322 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7544;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89956377 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7947;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=1737;AN=2184 GT:DS:GL:BD 0.79532969 1
1 89956470 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0268;AVGPOST=0.9993;RSQ=0.9890;ERATE=0.0004;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 89956547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1745;AVGPOST=0.9988;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 89956561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89956573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.3960;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89956612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0036;AVGPOST=0.9967;RSQ=0.6589;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89956614 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.956;LDAF=0.7796;AVGPOST=0.9744;RSQ=0.9468;ERATE=0.0036;THETA=0.0005;AC=1722;AN=2184 GT:DS:GL:BD 0.78846157 1
1 89956626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.777;LDAF=0.0197;AVGPOST=0.9959;RSQ=0.9094;ERATE=0.0004;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89956643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.904;BRSQ=0.630;LDAF=0.8176;AVGPOST=0.8538;RSQ=0.5857;ERATE=0.0621;THETA=0.0008;AC=1861;AN=2184 GT:DS:GL:BD 0.85210621 1
1 89956860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.974;LDAF=0.1334;AVGPOST=0.9971;RSQ=0.9910;ERATE=0.0005;THETA=0.0002;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 89956895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.894;LDAF=0.0280;AVGPOST=0.9917;RSQ=0.8818;ERATE=0.0012;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 89956966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.474;LDAF=0.0127;AVGPOST=0.9925;RSQ=0.7409;ERATE=0.0009;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 89956967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.940;LDAF=0.7729;AVGPOST=0.9781;RSQ=0.9528;ERATE=0.0008;THETA=0.0003;AC=1704;AN=2184 GT:DS:GL:BD 0.78021979 1
1 89957144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0042;AVGPOST=0.9943;RSQ=0.4955;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89957179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0032;AVGPOST=0.9976;RSQ=0.6866;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89957322 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.599;LDAF=0.0068;AVGPOST=0.9953;RSQ=0.7346;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89957382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0076;AVGPOST=0.9982;RSQ=0.8936;ERATE=0.0004;THETA=0.0048;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89957384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0384;AVGPOST=0.9991;RSQ=0.9903;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 89957593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0382;AVGPOST=0.9987;RSQ=0.9852;ERATE=0.0004;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 89957617 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8012;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89957704 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1329;AVGPOST=0.9988;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 89957713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.9004;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89957719 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0385;AVGPOST=0.9984;RSQ=0.9851;ERATE=0.0004;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 89957745 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1748;AVGPOST=0.9970;RSQ=0.9921;ERATE=0.0006;THETA=0.0004;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 89957781 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5270;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89957798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.904;LDAF=0.1275;AVGPOST=0.9925;RSQ=0.9740;ERATE=0.0008;THETA=0.0003;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 89957862 . AAGGCTCG A 152 PASS INDEL;BAVGPOST=0.992;BRSQ=0.247;LDAF=0.0105;AVGPOST=0.9857;RSQ=0.4416;ERATE=0.0017;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89957897 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.769;BRSQ=0.358;LDAF=0.7173;AVGPOST=0.7125;RSQ=0.3941;ERATE=0.0518;THETA=0.0006;AC=1706;AN=2184 GT:DS:GL:BD 0.78113556 1
1 89957905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.847;LDAF=0.1158;AVGPOST=0.9647;RSQ=0.8841;ERATE=0.0005;THETA=0.0003;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 89957992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.749;LDAF=0.0239;AVGPOST=0.9881;RSQ=0.8023;ERATE=0.0006;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 89958003 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0117;AVGPOST=0.9973;RSQ=0.9187;ERATE=0.0005;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 89958052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.870;BRSQ=0.745;LDAF=0.3327;AVGPOST=0.8739;RSQ=0.8001;ERATE=0.0127;THETA=0.0003;AC=758;AN=2184 GT:DS:GL:BD 0.34706959 0
1 89958204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0372;AVGPOST=0.9980;RSQ=0.9800;ERATE=0.0004;THETA=0.0008;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 89958314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.938;LDAF=0.6342;AVGPOST=0.9362;RSQ=0.9005;ERATE=0.0097;THETA=0.0004;AC=1402;AN=2184 GT:DS:GL:BD 0.64194137 1
1 89958341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.934;LDAF=0.5718;AVGPOST=0.9646;RSQ=0.9419;ERATE=0.0026;THETA=0.0005;AC=1256;AN=2184 GT:DS:GL:BD 0.57509160 1
1 89958388 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.930;LDAF=0.1704;AVGPOST=0.9931;RSQ=0.9825;ERATE=0.0006;THETA=0.0006;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 89958456 . A ATT 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7077;ERATE=0.0008;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89958528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5706;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89958937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0059;AVGPOST=0.9964;RSQ=0.7729;ERATE=0.0007;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89959245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.961;LDAF=0.7857;AVGPOST=0.9733;RSQ=0.9421;ERATE=0.0024;THETA=0.0006;AC=1722;AN=2184 GT:DS:GL:BD 0.78846157 1
1 89959397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.6131;AVGPOST=0.9839;RSQ=0.9743;ERATE=0.0012;THETA=0.0008;AC=1342;AN=2184 GT:DS:GL:BD 0.61446887 1
1 89959479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.790;LDAF=0.0091;AVGPOST=0.9954;RSQ=0.8405;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 89959677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89959819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.568;LDAF=0.0258;AVGPOST=0.9720;RSQ=0.5628;ERATE=0.0063;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 89960076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.749;BRSQ=0.386;LDAF=0.7069;AVGPOST=0.6951;RSQ=0.4116;ERATE=0.0487;THETA=0.0006;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 89960166 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.934;LDAF=0.1303;AVGPOST=0.9892;RSQ=0.9668;ERATE=0.0005;THETA=0.0006;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 89960523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.634;LDAF=0.0952;AVGPOST=0.9651;RSQ=0.8659;ERATE=0.0004;THETA=0.0005;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 89960529 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7540;ERATE=0.0005;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89960855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0068;AVGPOST=0.9918;RSQ=0.5448;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89960937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1337;AVGPOST=0.9933;RSQ=0.9789;ERATE=0.0008;THETA=0.0004;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 89961000 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1348;AVGPOST=0.9947;RSQ=0.9830;ERATE=0.0006;THETA=0.0006;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 89961083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0240;AVGPOST=0.9960;RSQ=0.9299;ERATE=0.0004;THETA=0.0024;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 89961300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5411;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89961347 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.888;BRSQ=0.449;LDAF=0.8055;AVGPOST=0.7793;RSQ=0.3958;ERATE=0.0469;THETA=0.0007;AC=1920;AN=2184 GT:DS:GL:BD 0.87912089 1
1 89962065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.808;BRSQ=0.119;LDAF=0.2136;AVGPOST=0.7175;RSQ=0.3247;ERATE=0.0228;THETA=0.0005;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 89962066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.783;BRSQ=0.123;LDAF=0.2195;AVGPOST=0.7513;RSQ=0.4064;ERATE=0.0159;THETA=0.0008;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 89962200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8966;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89962431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0093;AVGPOST=0.9961;RSQ=0.8293;ERATE=0.0006;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 89962447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7312;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89962478 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.885;LDAF=0.5555;AVGPOST=0.9087;RSQ=0.8586;ERATE=0.0133;THETA=0.0008;AC=1225;AN=2184 GT:DS:GL:BD 0.56089741 1
1 89962489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.948;LDAF=0.1338;AVGPOST=0.9899;RSQ=0.9678;ERATE=0.0009;THETA=0.0004;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 89962510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.756;LDAF=0.0273;AVGPOST=0.9625;RSQ=0.4773;ERATE=0.0026;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 89962547 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.285;LDAF=0.0057;AVGPOST=0.9932;RSQ=0.5270;ERATE=0.0008;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89962595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.940;LDAF=0.1335;AVGPOST=0.9929;RSQ=0.9772;ERATE=0.0007;THETA=0.0009;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 89962734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.684;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5572;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89962823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.6116;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89962860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0203;AVGPOST=0.9996;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89962864 . G GA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5058;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89962866 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5977;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89962890 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0043;AVGPOST=0.9968;RSQ=0.6885;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89963133 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89963201 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89963261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7943;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89963384 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9690;AVGPOST=0.9990;RSQ=0.9864;ERATE=0.0003;THETA=0.0005;AC=2117;AN=2184 GT:DS:GL:BD 0.96932232 1
1 89963542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7255;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89963546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0043;AVGPOST=0.9981;RSQ=0.8271;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89963623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5363;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89963909 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0204;AVGPOST=0.9995;RSQ=0.9883;ERATE=0.0004;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89963964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89964002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.3301;AVGPOST=0.9887;RSQ=0.9800;ERATE=0.0019;THETA=0.0002;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 89964068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8393;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89964098 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6600;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89964164 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0383;AVGPOST=0.9992;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 89964183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1332;AVGPOST=0.9984;RSQ=0.9949;ERATE=0.0004;THETA=0.0006;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 89964208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9788;ERATE=0.0003;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89964256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89964557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9311;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89964562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1344;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0004;THETA=0.0002;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 89964567 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8816;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89964728 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89964759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89965011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8267;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89965036 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1330;AVGPOST=0.9980;RSQ=0.9937;ERATE=0.0003;THETA=0.0006;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 89965048 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1329;AVGPOST=0.9977;RSQ=0.9926;ERATE=0.0003;THETA=0.0004;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 89965161 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5570;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89965282 rs78351305 A AT 7596 PASS INDEL;BAVGPOST=0.982;BRSQ=0.831;LDAF=0.0512;AVGPOST=0.9883;RSQ=0.9170;ERATE=0.0004;THETA=0.0004;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 89965543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7400;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89965580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6782;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89965699 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0137;AVGPOST=0.9993;RSQ=0.9794;ERATE=0.0003;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 89965940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0297;AVGPOST=0.9985;RSQ=0.9801;ERATE=0.0004;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 89965966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89965985 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89966035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0105;AVGPOST=1.0000;RSQ=0.9979;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 89966173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8492;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89966186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8296;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89966284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89966489 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89966633 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89966667 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9156;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89966696 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0086;AVGPOST=0.9997;RSQ=0.9868;ERATE=0.0003;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89966881 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5057;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89967054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.7923;AVGPOST=0.9967;RSQ=0.9917;ERATE=0.0005;THETA=0.0005;AC=1732;AN=2184 GT:DS:GL:BD 0.79304028 1
1 89967056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7543;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89967177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89967201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89967206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5892;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89967452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89967478 . GAATA G 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7252;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89967624 . CA C 3940 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0381;AVGPOST=0.9985;RSQ=0.9855;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 89967757 . CA C 58 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0033;AVGPOST=0.9949;RSQ=0.4311;ERATE=0.0003;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89967800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0211;AVGPOST=0.9989;RSQ=0.9808;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 89967840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1758;AVGPOST=0.9965;RSQ=0.9911;ERATE=0.0005;THETA=0.0008;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 89967951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0106;AVGPOST=0.9978;RSQ=0.9244;ERATE=0.0003;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 89967973 . TAGAA T 221 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7123;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89968015 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9988;RSQ=0.9331;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89968103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6814;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89968127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89968186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7374;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89968362 . CACACACAA C 13791 PASS INDEL;BAVGPOST=0.983;BRSQ=0.952;LDAF=0.1869;AVGPOST=0.9673;RSQ=0.9303;ERATE=0.0034;THETA=0.0003;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 89968364 . CACACAA C 13904 PASS INDEL;BAVGPOST=0.987;BRSQ=0.965;LDAF=0.1797;AVGPOST=0.9807;RSQ=0.9586;ERATE=0.0008;THETA=0.0006;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 89968366 . CACAA C 13197 PASS INDEL;BAVGPOST=0.988;BRSQ=0.968;LDAF=0.1741;AVGPOST=0.9862;RSQ=0.9699;ERATE=0.0004;THETA=0.0004;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 89968368 rs58146978 CAA C 5819 PASS INDEL;BAVGPOST=0.988;BRSQ=0.965;LDAF=0.1742;AVGPOST=0.9833;RSQ=0.9621;ERATE=0.0007;THETA=0.0011;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 89968371 . AAT A 747 PASS INDEL;BAVGPOST=0.918;BRSQ=0.527;LDAF=0.1223;AVGPOST=0.8831;RSQ=0.5826;ERATE=0.0261;THETA=0.0008;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 89968485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6250;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89968620 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0100;AVGPOST=0.9992;RSQ=0.9620;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 89968877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0027;AVGPOST=0.9985;RSQ=0.7981;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89968885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89968937 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89968987 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89969067 . AT A 62 PASS INDEL;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0033;AVGPOST=0.9957;RSQ=0.5076;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89969251 . CA C 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5101;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89969324 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89969332 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9122;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89969357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1332;AVGPOST=0.9981;RSQ=0.9945;ERATE=0.0004;THETA=0.0007;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 89969468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7068;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89969609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89969663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5437;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89969724 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0202;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89969904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6683;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89970009 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.500;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6556;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89970054 . CAGAT C 2855 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0203;AVGPOST=0.9995;RSQ=0.9893;ERATE=0.0004;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89970163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2204;AVGPOST=0.9954;RSQ=0.9897;ERATE=0.0004;THETA=0.0002;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 89970257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6283;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89970354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89970358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89970623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89970643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6112;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89970790 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6882;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89970871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89970918 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6396;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89971008 rs113779057 GATA G 25871 PASS INDEL;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1339;AVGPOST=0.9984;RSQ=0.9942;ERATE=0.0005;THETA=0.0008;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 89971129 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8387;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89971327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7621;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89971402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7361;ERATE=0.0003;THETA=0.0064;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89971458 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89971662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7696;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89971712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89971735 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9087;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89971785 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1333;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0003;THETA=0.0007;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 89971833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89971854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89971885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89971980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8330;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89972059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5647;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89972062 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1628;AVGPOST=0.9984;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 89972073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89972174 . CCTAA C 42 PASS INDEL;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4967;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89972220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1335;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 89972297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0047;AVGPOST=0.9969;RSQ=0.7225;ERATE=0.0009;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89972399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4250;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89972477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6417;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89972499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6083;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89972554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0095;AVGPOST=0.9988;RSQ=0.9463;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 89972599 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1403;AVGPOST=0.9963;RSQ=0.9876;ERATE=0.0006;THETA=0.0007;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 89972669 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0062;AVGPOST=0.9989;RSQ=0.9348;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89972675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89972813 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8499;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89972846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1324;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0006;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 89972894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.825;LDAF=0.0078;AVGPOST=0.9984;RSQ=0.9236;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 89973068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89973096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5778;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89973273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5048;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89973458 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6829;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89973484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9330;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89973631 . ATC A 5308 PASS INDEL;BAVGPOST=0.988;BRSQ=0.951;LDAF=0.1269;AVGPOST=0.9949;RSQ=0.9826;ERATE=0.0005;THETA=0.0007;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 89973633 rs34303039 CTCTT C 31298 PASS INDEL;BAVGPOST=0.990;BRSQ=0.958;LDAF=0.1304;AVGPOST=0.9962;RSQ=0.9869;ERATE=0.0006;THETA=0.0004;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 89973671 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5802;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89973828 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1670;AVGPOST=0.9983;RSQ=0.9952;ERATE=0.0004;THETA=0.0005;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 89973863 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89973925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89973926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89974047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8498;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89974167 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.6493;AVGPOST=0.9950;RSQ=0.9911;ERATE=0.0006;THETA=0.0003;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 89974248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0072;AVGPOST=0.9974;RSQ=0.8485;ERATE=0.0007;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89974301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.934;LDAF=0.6468;AVGPOST=0.9914;RSQ=0.9842;ERATE=0.0008;THETA=0.0005;AC=1419;AN=2184 GT:DS:GL:BD 0.64972526 1
1 89974327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.546;LDAF=0.0064;AVGPOST=0.9937;RSQ=0.6056;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89974413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.435;LDAF=0.0034;AVGPOST=0.9951;RSQ=0.3769;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89974418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0064;AVGPOST=0.9928;RSQ=0.5374;ERATE=0.0008;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89974422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.816;LDAF=0.0601;AVGPOST=0.9782;RSQ=0.8482;ERATE=0.0007;THETA=0.0003;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 89974470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9470;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89974542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9291;ERATE=0.0003;THETA=0.0019;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89974543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8971;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89974672 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89974824 . CA C 385 PASS INDEL;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8598;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89974882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89974906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1752;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0004;THETA=0.0007;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 89974927 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89974962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89975217 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89975255 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9980;RSQ=0.8084;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89975349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89975474 rs35555992 TAC T 22077 PASS INDEL;BAVGPOST=0.992;BRSQ=0.971;LDAF=0.1323;AVGPOST=0.9977;RSQ=0.9920;ERATE=0.0007;THETA=0.0003;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 89975480 . GTC G 165 PASS INDEL;BAVGPOST=0.997;BRSQ=0.738;LDAF=0.0068;AVGPOST=0.9948;RSQ=0.7027;ERATE=0.0009;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89975704 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.690;LDAF=0.0171;AVGPOST=0.9917;RSQ=0.8196;ERATE=0.0007;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 89975885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.941;LDAF=0.0365;AVGPOST=0.9972;RSQ=0.9749;ERATE=0.0004;THETA=0.0017;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 89975920 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6034;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89975937 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9995;RSQ=0.9773;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 89975959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5854;AVGPOST=0.9975;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=1278;AN=2184 GT:DS:GL:BD 0.58516484 1
1 89976018 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.1282;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 89976024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89976044 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9797;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89976127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7881;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89976154 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1338;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0004;THETA=0.0011;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 89976162 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6930;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89976172 . AGTCT A 1022 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9982;RSQ=0.9058;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89976186 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0292;AVGPOST=0.9992;RSQ=0.9883;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 89976190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89976209 . TTTGA T 26669 PASS INDEL;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1326;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 89976212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0091;AVGPOST=0.9985;RSQ=0.9381;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89976449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0201;AVGPOST=1.0000;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89976661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0202;AVGPOST=0.9996;RSQ=0.9915;ERATE=0.0004;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89976670 . G GT 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0030;AVGPOST=0.9969;RSQ=0.5919;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89976682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.681;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6879;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89976941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5918;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89976988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.960;LDAF=0.7160;AVGPOST=0.9843;RSQ=0.9700;ERATE=0.0006;THETA=0.0004;AC=1564;AN=2184 GT:DS:GL:BD 0.71611720 1
1 89977051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89977075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9470;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89977323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8121;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89977436 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9988;RSQ=0.9569;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89977538 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1414;AVGPOST=0.9988;RSQ=0.9960;ERATE=0.0004;THETA=0.0002;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 89977579 . G GC 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89977589 . ATC A 23628 PASS INDEL;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2072;AVGPOST=0.9964;RSQ=0.9912;ERATE=0.0011;THETA=0.0010;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 89977846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9636;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89977883 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1425;AVGPOST=0.9977;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 89977977 . A ATAGCTATAT 210 PASS INDEL;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6930;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89977981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0076;AVGPOST=0.9983;RSQ=0.9035;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 89978028 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9986;RSQ=0.9411;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89978037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8424;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89978147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89978181 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6975;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89978284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9985;RSQ=0.9157;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89978383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6493;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89978454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.889;LDAF=0.0143;AVGPOST=0.9958;RSQ=0.8787;ERATE=0.0005;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 89978491 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1348;AVGPOST=0.9963;RSQ=0.9884;ERATE=0.0007;THETA=0.0004;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 89978594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2068;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0004;THETA=0.0007;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 89978705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1326;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 89978815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89978880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.887;LDAF=0.0174;AVGPOST=0.9969;RSQ=0.9251;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 89979051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89979070 rs111642522 G GCACA 35653 PASS INDEL;BAVGPOST=0.982;BRSQ=0.928;LDAF=0.1310;AVGPOST=0.9945;RSQ=0.9811;ERATE=0.0007;THETA=0.0004;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 89979109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4054;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89979180 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1411;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 89979359 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.868;LDAF=0.0094;AVGPOST=0.9980;RSQ=0.9125;ERATE=0.0005;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89979469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8587;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89979482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0087;AVGPOST=0.9995;RSQ=0.9778;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89979494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6910;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89979577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89979580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0024;AVGPOST=0.9972;RSQ=0.5746;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89979646 . CAAATATTTTCT C 956 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9289;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89979702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89979760 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.546;LDAF=0.0170;AVGPOST=0.9795;RSQ=0.5275;ERATE=0.0045;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 89979923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1328;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 89979978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0122;AVGPOST=0.9989;RSQ=0.9658;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89980035 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1325;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 89980150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9785;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 89980151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1746;AVGPOST=0.9961;RSQ=0.9896;ERATE=0.0005;THETA=0.0002;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 89980165 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6786;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89980178 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7873;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89980195 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0099;AVGPOST=0.9995;RSQ=0.9814;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 89980265 . C CT 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0031;AVGPOST=0.9965;RSQ=0.5949;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89980351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5861;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89980460 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1682;AVGPOST=0.9973;RSQ=0.9942;ERATE=0.0004;THETA=0.0008;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 89980472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7489;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89980473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89980682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6859;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89980730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1316;AVGPOST=0.9984;RSQ=0.9957;ERATE=0.0004;THETA=0.0007;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 89980917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9271;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89980920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0168;AVGPOST=0.9968;RSQ=0.9313;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 89980974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9589;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 89980976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6492;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89981160 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7364;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89981162 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1347;AVGPOST=0.9982;RSQ=0.9940;ERATE=0.0010;THETA=0.0004;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 89981180 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7217;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89981272 . TG T 2398 PASS INDEL;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0132;AVGPOST=0.9987;RSQ=0.9542;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 89981376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3073;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0005;THETA=0.0038;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 89981468 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3082;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 89981475 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0268;AVGPOST=0.9990;RSQ=0.9857;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 89981492 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7042;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89981573 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89981790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7079;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89981817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89981839 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89981912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0124;AVGPOST=0.9995;RSQ=0.9823;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 89982002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8542;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89982173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89982181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0315;AVGPOST=0.9993;RSQ=0.9898;ERATE=0.0004;THETA=0.0013;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 89982230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89982385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0034;AVGPOST=0.9976;RSQ=0.7209;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89982479 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0099;AVGPOST=0.9957;RSQ=0.8392;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 89982497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7631;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89982501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1719;AVGPOST=0.9975;RSQ=0.9945;ERATE=0.0003;THETA=0.0006;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 89982687 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89982719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1743;AVGPOST=0.9987;RSQ=0.9966;ERATE=0.0003;THETA=0.0028;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 89982747 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9764;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89982760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89982771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1322;AVGPOST=0.9983;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 89982966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0311;AVGPOST=0.9985;RSQ=0.9821;ERATE=0.0004;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 89983134 rs56825604 C CA 614 PASS INDEL;BAVGPOST=0.572;BRSQ=0.160;LDAF=0.3244;AVGPOST=0.6794;RSQ=0.3901;ERATE=0.0206;THETA=0.0007;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 89983176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0063;AVGPOST=0.9991;RSQ=0.9453;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89983184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0404;AVGPOST=0.9985;RSQ=0.9845;ERATE=0.0003;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 89983330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8494;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89983470 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89983657 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89983666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0394;AVGPOST=0.9995;RSQ=0.9947;ERATE=0.0004;THETA=0.0007;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 89983694 rs35651747 G GA 7364 PASS INDEL;BAVGPOST=0.984;BRSQ=0.903;LDAF=0.0990;AVGPOST=0.9535;RSQ=0.8121;ERATE=0.0097;THETA=0.0004;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 89983873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0395;AVGPOST=0.9994;RSQ=0.9927;ERATE=0.0004;THETA=0.0007;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 89983988 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0266;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 89984120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9148;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89984146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7220;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89984176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9302;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89984204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89984308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0072;AVGPOST=0.9975;RSQ=0.8612;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 89984329 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.969;LDAF=0.1328;AVGPOST=0.9917;RSQ=0.9732;ERATE=0.0005;THETA=0.0018;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 89984363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0395;AVGPOST=0.9993;RSQ=0.9928;ERATE=0.0003;THETA=0.0009;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 89984397 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89984425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0393;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0004;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 89984458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8123;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89984469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6502;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89984518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0394;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0006;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 89984538 . GAATT G 2045 PASS INDEL;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0063;AVGPOST=0.9995;RSQ=0.9651;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89984599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7820;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89984618 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9996;RSQ=0.9752;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89984648 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89984675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89984745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.734;LDAF=0.0068;AVGPOST=0.9951;RSQ=0.7278;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 89984798 . CG C 396 PASS INDEL;BAVGPOST=0.998;BRSQ=0.594;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.7604;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89984916 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0096;AVGPOST=0.9962;RSQ=0.8495;ERATE=0.0005;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 89984998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6338;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89985030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89985079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89985090 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0101;AVGPOST=0.9993;RSQ=0.9688;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 89985093 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89985237 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5553;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89985286 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.5875;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89985351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9982;RSQ=0.8452;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89985356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9652;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89985359 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.929;LDAF=0.1176;AVGPOST=0.9893;RSQ=0.9594;ERATE=0.0006;THETA=0.0014;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 89985380 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0395;AVGPOST=0.9995;RSQ=0.9943;ERATE=0.0003;THETA=0.0008;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 89985396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0396;AVGPOST=0.9995;RSQ=0.9937;ERATE=0.0004;THETA=0.0010;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 89985496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7293;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89985510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5826;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89985545 . AG A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.5929;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89985576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5400;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89985729 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6343;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89985741 . TAGA T 76 PASS INDEL;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4575;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89985788 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1319;AVGPOST=0.9985;RSQ=0.9949;ERATE=0.0004;THETA=0.0004;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 89985863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0394;AVGPOST=0.9996;RSQ=0.9952;ERATE=0.0004;THETA=0.0007;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 89985884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0399;AVGPOST=0.9988;RSQ=0.9892;ERATE=0.0003;THETA=0.0006;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 89985893 . G GA 17 PASS INDEL;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89985902 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89986181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7561;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89986189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6034;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89986227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0395;AVGPOST=0.9996;RSQ=0.9953;ERATE=0.0003;THETA=0.0006;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 89986382 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0385;AVGPOST=0.9995;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 89986410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5095;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89986413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1323;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 89986456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0265;AVGPOST=0.9997;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 89986463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0385;AVGPOST=0.9995;RSQ=0.9947;ERATE=0.0003;THETA=0.0008;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 89986484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89986589 . TA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4184;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89986613 . G GA 83 PASS INDEL;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89986830 rs35005233 ACCATCTGATCTTTGAT A 3010 PASS INDEL;BAVGPOST=0.993;BRSQ=0.731;LDAF=0.0086;AVGPOST=0.9944;RSQ=0.7467;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89986878 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7215;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89986897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0031;AVGPOST=0.9965;RSQ=0.5480;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89987221 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0333;AVGPOST=0.9992;RSQ=0.9883;ERATE=0.0004;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 89987343 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0503;AVGPOST=0.9971;RSQ=0.9738;ERATE=0.0005;THETA=0.0006;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 89987359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.893;LDAF=0.0266;AVGPOST=0.9977;RSQ=0.9614;ERATE=0.0005;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 89987450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.904;LDAF=0.0177;AVGPOST=0.9922;RSQ=0.8372;ERATE=0.0004;THETA=0.0008;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 89987753 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.921;LDAF=0.0434;AVGPOST=0.9933;RSQ=0.9424;ERATE=0.0011;THETA=0.0018;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 89987868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0031;AVGPOST=0.9976;RSQ=0.6678;ERATE=0.0005;THETA=0.0023;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89987940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.955;LDAF=0.4217;AVGPOST=0.9659;RSQ=0.9498;ERATE=0.0064;THETA=0.0004;AC=920;AN=2184 GT:DS:GL:BD 0.42124543 0
1 89987941 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.876;LDAF=0.0838;AVGPOST=0.9925;RSQ=0.9670;ERATE=0.0007;THETA=0.0010;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 89987955 . G GT 258 PASS INDEL;BAVGPOST=0.998;BRSQ=0.670;LDAF=0.0034;AVGPOST=0.9968;RSQ=0.6027;ERATE=0.0008;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89987971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7544;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89988060 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0074;AVGPOST=0.9987;RSQ=0.9293;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89988066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5281;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89988182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89988263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7220;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89988365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89988373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89988469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89988487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7347;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89988590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0204;AVGPOST=0.9992;RSQ=0.9838;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89988623 . AC A 513 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8551;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89988624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0394;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 89988638 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0396;AVGPOST=0.9994;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 89988696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6975;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89988704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0394;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0006;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 89988716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9762;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89988778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0394;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0040;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 89988873 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89988888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0205;AVGPOST=0.9993;RSQ=0.9868;ERATE=0.0003;THETA=0.0009;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89988913 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6953;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89988951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0404;AVGPOST=0.9990;RSQ=0.9905;ERATE=0.0004;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 89989051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7071;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89989334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2500;AVGPOST=0.9981;RSQ=0.9961;ERATE=0.0004;THETA=0.0007;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 89989354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0907;AVGPOST=0.9990;RSQ=0.9959;ERATE=0.0003;THETA=0.0026;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 89989378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8542;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89989437 . T TG 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0030;AVGPOST=0.9967;RSQ=0.5510;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89989544 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0354;AVGPOST=0.9984;RSQ=0.9854;ERATE=0.0003;THETA=0.0011;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 89989689 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89989691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7812;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89989736 . TA T 568 PASS INDEL;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0078;AVGPOST=0.9979;RSQ=0.8813;ERATE=0.0005;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 89989773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5375;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89989902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5490;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89989925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5793;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89989985 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.7986;ERATE=0.0005;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89990027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.4052;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89990098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.633;LDAF=0.0050;AVGPOST=0.9950;RSQ=0.6126;ERATE=0.0009;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89990164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0041;AVGPOST=0.9963;RSQ=0.6352;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89990189 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0072;AVGPOST=0.9983;RSQ=0.9084;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89990191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6464;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89990214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0024;AVGPOST=0.9965;RSQ=0.4482;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89990257 . TTCCTCCTCCTCC T 1813 PASS INDEL;BAVGPOST=0.987;BRSQ=0.869;LDAF=0.0626;AVGPOST=0.9766;RSQ=0.8540;ERATE=0.0020;THETA=0.0006;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 89990440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.762;LDAF=0.0197;AVGPOST=0.9733;RSQ=0.4682;ERATE=0.0020;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 89990520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.907;LDAF=0.0625;AVGPOST=0.9713;RSQ=0.8038;ERATE=0.0028;THETA=0.0026;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 89990533 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.928;LDAF=0.0542;AVGPOST=0.9880;RSQ=0.9109;ERATE=0.0007;THETA=0.0023;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 89990546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.456;LDAF=0.0131;AVGPOST=0.9877;RSQ=0.6210;ERATE=0.0009;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 89990641 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0059;AVGPOST=0.9964;RSQ=0.7584;ERATE=0.0005;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 89990687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.967;LDAF=0.0547;AVGPOST=0.9893;RSQ=0.9277;ERATE=0.0008;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 89990700 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.553;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3385;ERATE=0.0008;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89990701 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.862;LDAF=0.0311;AVGPOST=0.9859;RSQ=0.8345;ERATE=0.0006;THETA=0.0008;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 89990702 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.865;LDAF=0.0316;AVGPOST=0.9847;RSQ=0.8227;ERATE=0.0005;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 89990714 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0167;AVGPOST=0.9941;RSQ=0.8628;ERATE=0.0004;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 89990771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0515;AVGPOST=0.9964;RSQ=0.9685;ERATE=0.0011;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 89990774 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.622;LDAF=0.0200;AVGPOST=0.9839;RSQ=0.6988;ERATE=0.0006;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 89990789 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7540;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89990916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0502;AVGPOST=0.9980;RSQ=0.9850;ERATE=0.0004;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 89990997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1662;AVGPOST=0.9948;RSQ=0.9856;ERATE=0.0004;THETA=0.0003;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 89991005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0136;AVGPOST=0.9955;RSQ=0.8897;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 89991123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89991133 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.286;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4301;ERATE=0.0006;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89991519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89991560 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6756;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89991729 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6427;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89991813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.841;LDAF=0.0051;AVGPOST=0.9948;RSQ=0.6246;ERATE=0.0007;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89991860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.574;LDAF=0.0058;AVGPOST=0.9943;RSQ=0.5804;ERATE=0.0010;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89991935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9078;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89992249 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.840;LDAF=0.0092;AVGPOST=0.9975;RSQ=0.8896;ERATE=0.0004;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 89992291 . CCTTATA C 7779 PASS INDEL;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0335;AVGPOST=0.9994;RSQ=0.9910;ERATE=0.0004;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 89992505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89992531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0320;AVGPOST=0.9988;RSQ=0.9866;ERATE=0.0003;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 89992671 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89992698 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6487;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89992818 . C CAT 227 PASS INDEL;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89992834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1820;AVGPOST=0.9950;RSQ=0.9882;ERATE=0.0009;THETA=0.0006;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 89993189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.7429;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89993233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89993254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.5212;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89993339 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89993414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0050;AVGPOST=0.9961;RSQ=0.7511;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89993589 . CTGCTTTTGA C 345 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89993606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89993615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89993641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89993689 . ATTCT A 1391 PASS INDEL;BAVGPOST=0.996;BRSQ=0.828;LDAF=0.0130;AVGPOST=0.9940;RSQ=0.8315;ERATE=0.0006;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 89993784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.9242;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89993796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89993830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8295;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89993836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89993854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89993897 . ATTCC A 187 PASS INDEL;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6992;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89993948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7000;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89994090 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1804;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0005;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 89994122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89994170 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1811;AVGPOST=0.9988;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 89994509 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4713;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89994529 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8244;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89994561 rs34402953 TA T 2036 PASS INDEL;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0316;AVGPOST=0.9940;RSQ=0.9238;ERATE=0.0010;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 89994577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4207;AVGPOST=0.9957;RSQ=0.9932;ERATE=0.0007;THETA=0.0005;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 89994600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6656;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89994612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89994676 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0334;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0003;THETA=0.0007;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 89994703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0296;AVGPOST=0.9984;RSQ=0.9786;ERATE=0.0004;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 89994725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1805;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0004;THETA=0.0006;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 89994746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5365;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89994849 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0004;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89994982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4489;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89994983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1720;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 89995005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8368;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89995010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1806;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 89995037 rs35629610 G GTC 24147 PASS INDEL;BAVGPOST=0.981;BRSQ=0.942;LDAF=0.1820;AVGPOST=0.9748;RSQ=0.9418;ERATE=0.0027;THETA=0.0005;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 89995053 . C CTG 2409 PASS INDEL;BAVGPOST=0.966;BRSQ=0.861;LDAF=0.1408;AVGPOST=0.9614;RSQ=0.8849;ERATE=0.0037;THETA=0.0003;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 89995069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1813;AVGPOST=0.9973;RSQ=0.9932;ERATE=0.0004;THETA=0.0012;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 89995216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1808;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 89995288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1752;AVGPOST=0.9948;RSQ=0.9882;ERATE=0.0006;THETA=0.0006;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 89995306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89995318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0032;AVGPOST=0.9967;RSQ=0.5756;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89995515 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1808;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0003;THETA=0.0011;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 89995561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89995600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.814;LDAF=0.0106;AVGPOST=0.9932;RSQ=0.7418;ERATE=0.0004;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89995614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.6970;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 89995697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5573;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89995714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0028;AVGPOST=0.9970;RSQ=0.6297;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89995882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.746;LDAF=0.0107;AVGPOST=0.9931;RSQ=0.7565;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 89996021 . A AT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6118;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89996022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7237;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89996068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1810;AVGPOST=0.9984;RSQ=0.9958;ERATE=0.0005;THETA=0.0003;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 89996110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89996183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89996188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8320;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89996213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8983;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89996262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1297;AVGPOST=0.9986;RSQ=0.9954;ERATE=0.0004;THETA=0.0009;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 89996263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89996336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4196;AVGPOST=0.9960;RSQ=0.9937;ERATE=0.0005;THETA=0.0030;AC=917;AN=2184 GT:DS:GL:BD 0.41987181 0
1 89996450 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0047;AVGPOST=0.9990;RSQ=0.9142;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 89996485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89996524 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1812;AVGPOST=0.9985;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 89996539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7999;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89996543 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9521;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89996573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1807;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 89996677 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1814;AVGPOST=0.9981;RSQ=0.9955;ERATE=0.0005;THETA=0.0003;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 89996680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89996832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0142;AVGPOST=0.9970;RSQ=0.9302;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 89997018 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6371;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89997037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0283;AVGPOST=0.9990;RSQ=0.9863;ERATE=0.0003;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 89997146 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6281;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89997207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0104;AVGPOST=0.9977;RSQ=0.9176;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 89997436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0503;AVGPOST=0.9989;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 89997662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89997812 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0204;AVGPOST=0.9994;RSQ=0.9872;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 89997818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89997948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0261;AVGPOST=0.9993;RSQ=0.9886;ERATE=0.0004;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 89997977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89998013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89998032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1322;AVGPOST=0.9987;RSQ=0.9960;ERATE=0.0004;THETA=0.0012;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 89998069 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6169;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89998178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8048;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89998368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8906;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 89998517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 89998640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1666;AVGPOST=0.9970;RSQ=0.9932;ERATE=0.0004;THETA=0.0004;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 89998710 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89998747 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89998976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8255;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89999023 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0280;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 89999069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89999085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 89999106 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9379;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89999295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0056;AVGPOST=0.9990;RSQ=0.9338;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 89999296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0183;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 89999310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8370;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89999328 . TC T 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6280;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 89999372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9299;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 89999394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89999395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6550;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89999476 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 89999566 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0063;AVGPOST=0.9987;RSQ=0.9233;ERATE=0.0003;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 89999598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 89999646 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1654;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 89999688 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8850;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 89999741 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7424;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 89999790 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0115;AVGPOST=0.9992;RSQ=0.9714;ERATE=0.0005;THETA=0.0013;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 89999800 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8475;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90000176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90000216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90000233 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8309;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90000248 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90000275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90000325 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9993;RSQ=0.9584;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90000377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.900;LDAF=0.0173;AVGPOST=0.9977;RSQ=0.9511;ERATE=0.0003;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 90000410 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0289;AVGPOST=0.9983;RSQ=0.9755;ERATE=0.0003;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 90000419 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90000432 . GA G 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4429;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90000700 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1368;AVGPOST=0.9984;RSQ=0.9947;ERATE=0.0005;THETA=0.0005;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 90000936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0202;AVGPOST=0.9994;RSQ=0.9886;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 90000989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0034;AVGPOST=0.9973;RSQ=0.7046;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90001115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90001170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5444;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90001451 . A AT 103 PASS INDEL;BAVGPOST=0.982;BRSQ=0.550;LDAF=0.0434;AVGPOST=0.9458;RSQ=0.4836;ERATE=0.0137;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 90001607 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7406;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90001609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6672;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90001757 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90001950 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9362;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90001961 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90001975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1642;AVGPOST=0.9983;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 90002085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1932;AVGPOST=0.9981;RSQ=0.9952;ERATE=0.0007;THETA=0.0006;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 90002254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0114;AVGPOST=0.9990;RSQ=0.9670;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90002266 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0076;AVGPOST=0.9992;RSQ=0.9592;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90002310 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1383;AVGPOST=0.9987;RSQ=0.9956;ERATE=0.0006;THETA=0.0004;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 90002381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90002515 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90002711 . CA C 449 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8408;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90002780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8936;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90002816 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7954;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90002968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9447;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90003101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9291;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90003105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90003140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.471;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4453;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90003192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9315;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90003243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0070;AVGPOST=0.9992;RSQ=0.9483;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90003279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90003621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1330;AVGPOST=0.9974;RSQ=0.9916;ERATE=0.0007;THETA=0.0004;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 90003794 . A AT 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90003824 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90003826 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1309;AVGPOST=0.9987;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 90004087 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90004126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90004267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90004276 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0079;AVGPOST=0.9967;RSQ=0.8508;ERATE=0.0010;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90004295 . T TG 288 PASS INDEL;BAVGPOST=0.982;BRSQ=0.501;LDAF=0.0178;AVGPOST=0.9807;RSQ=0.5810;ERATE=0.0010;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90004301 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.708;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5661;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90004372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0198;AVGPOST=0.9958;RSQ=0.9197;ERATE=0.0003;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 90004681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90004731 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9547;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90004973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7045;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90005025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90005040 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0063;AVGPOST=0.9990;RSQ=0.9376;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90005111 . A AG 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7736;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90005132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4128;AVGPOST=0.9957;RSQ=0.9937;ERATE=0.0009;THETA=0.0006;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 90005143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9137;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90005159 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2540;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 90005522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6962;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90005541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6352;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90005579 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90005622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0064;AVGPOST=0.9983;RSQ=0.8866;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90005623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90005677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1390;AVGPOST=0.9979;RSQ=0.9933;ERATE=0.0006;THETA=0.0005;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 90005944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6919;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90006030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90006061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7732;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90006066 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0497;AVGPOST=0.9981;RSQ=0.9841;ERATE=0.0005;THETA=0.0003;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 90006286 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0068;AVGPOST=0.9984;RSQ=0.9000;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90006293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9796;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90006405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1370;AVGPOST=0.9980;RSQ=0.9944;ERATE=0.0004;THETA=0.0006;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 90006497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7000;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90006534 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90006544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4194;AVGPOST=0.9972;RSQ=0.9956;ERATE=0.0006;THETA=0.0002;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 90006556 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0120;AVGPOST=0.9961;RSQ=0.8845;ERATE=0.0004;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90006559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8101;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90006707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6970;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90006730 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.8000;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90006887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1363;AVGPOST=0.9983;RSQ=0.9947;ERATE=0.0004;THETA=0.0004;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 90006951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6068;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90006997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.889;LDAF=0.0473;AVGPOST=0.9884;RSQ=0.9062;ERATE=0.0005;THETA=0.0003;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 90006998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0087;AVGPOST=0.9971;RSQ=0.8629;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90006999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.812;LDAF=0.0180;AVGPOST=0.9949;RSQ=0.8879;ERATE=0.0004;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 90007194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.728;LDAF=0.0592;AVGPOST=0.9884;RSQ=0.9187;ERATE=0.0011;THETA=0.0007;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 90007205 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.648;LDAF=0.0104;AVGPOST=0.9949;RSQ=0.8103;ERATE=0.0004;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90007316 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.965;LDAF=0.4132;AVGPOST=0.9648;RSQ=0.9469;ERATE=0.0068;THETA=0.0011;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 90007401 . T TCTA 69 PASS INDEL;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6730;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90007458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7620;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90007506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0051;AVGPOST=0.9969;RSQ=0.7587;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90007555 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1952;AVGPOST=0.9952;RSQ=0.9881;ERATE=0.0008;THETA=0.0004;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 90007650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0274;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0003;THETA=0.0015;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 90007668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9471;ERATE=0.0003;THETA=0.0054;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90007695 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1308;AVGPOST=0.9982;RSQ=0.9941;ERATE=0.0005;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 90007871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90008058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9807;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90008166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6783;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90008212 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9081;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90008402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90008680 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5127;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90008805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8427;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90008818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0045;AVGPOST=0.9978;RSQ=0.8400;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90008987 . TTTC T 374 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7159;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90009015 . A AG 17 PASS INDEL;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6360;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90009025 . TTATTC T 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.5227;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90009097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1384;AVGPOST=0.9981;RSQ=0.9941;ERATE=0.0005;THETA=0.0006;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 90009101 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0047;AVGPOST=0.9981;RSQ=0.8505;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90009131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5892;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90009148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.865;LDAF=0.0482;AVGPOST=0.9781;RSQ=0.8233;ERATE=0.0021;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 90009202 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1307;AVGPOST=0.9955;RSQ=0.9862;ERATE=0.0004;THETA=0.0003;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 90009258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0124;AVGPOST=0.9980;RSQ=0.9349;ERATE=0.0004;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90009297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0049;AVGPOST=0.9964;RSQ=0.6844;ERATE=0.0006;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90009300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7930;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90009355 . A AT 1221 PASS INDEL;BAVGPOST=0.993;BRSQ=0.875;LDAF=0.0398;AVGPOST=0.9718;RSQ=0.7075;ERATE=0.0046;THETA=0.0041;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 90009407 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6966;ERATE=0.0009;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90009555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7586;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90009589 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8739;ERATE=0.0003;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90009647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6627;ERATE=0.0004;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90009839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90009917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9335;ERATE=0.0005;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90009928 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90009931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9482;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90010100 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90010161 . A ATAATAATATCCC 2410 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0065;AVGPOST=0.9988;RSQ=0.9112;ERATE=0.0006;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90010388 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4205;AVGPOST=0.9965;RSQ=0.9939;ERATE=0.0010;THETA=0.0003;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 90010814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2087;AVGPOST=0.9957;RSQ=0.9912;ERATE=0.0004;THETA=0.0024;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 90011038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9565;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90011143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9296;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90011253 . A AC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90011453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6255;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90011475 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1383;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 90011536 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90011841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1367;AVGPOST=0.9992;RSQ=0.9973;ERATE=0.0004;THETA=0.0008;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 90011922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8990;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90011959 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90012023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90012035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90012093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0504;AVGPOST=0.9986;RSQ=0.9892;ERATE=0.0003;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 90012126 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6695;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90012150 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0117;AVGPOST=0.9992;RSQ=0.9714;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90012261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90012270 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6794;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90012311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90012431 . AATT A 666 PASS INDEL;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0251;AVGPOST=0.9989;RSQ=0.9798;ERATE=0.0004;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 90012432 . ATTAT A 4535 PASS INDEL;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0254;AVGPOST=0.9984;RSQ=0.9725;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 90012475 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7477;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90012483 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9876;ERATE=0.0004;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90012505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0076;AVGPOST=0.9993;RSQ=0.9651;ERATE=0.0005;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90012757 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.8083;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90012818 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6328;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90012872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0213;AVGPOST=0.9992;RSQ=0.9826;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90013144 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4260;AVGPOST=0.9931;RSQ=0.9896;ERATE=0.0015;THETA=0.0003;AC=928;AN=2184 GT:DS:GL:BD 0.42490843 0
1 90013233 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1631;AVGPOST=0.9974;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 90013310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0077;AVGPOST=0.9977;RSQ=0.9003;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90013488 . A AG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4578;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90013569 rs10567894 CTT C 4724 PASS INDEL;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0526;AVGPOST=0.9942;RSQ=0.9558;ERATE=0.0006;THETA=0.0007;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 90013629 . T TG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0038;AVGPOST=0.9951;RSQ=0.5081;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90013655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90013687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5250;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90013920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1381;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 90014008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9588;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90014281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9524;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90014321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90014337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90014403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90014469 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5254;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90014475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6579;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90014545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90014607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90015173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5847;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90015259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1368;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0004;THETA=0.0029;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 90015360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.7264;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90015377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9989;RSQ=0.9780;ERATE=0.0005;THETA=0.0009;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90015441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8584;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90015469 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90015499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6937;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90015627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5354;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90015719 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4211;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0004;THETA=0.0032;AC=920;AN=2184 GT:DS:GL:BD 0.42124543 0
1 90015786 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1864;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 90015863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8798;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90015937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9159;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90016058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0212;AVGPOST=0.9997;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90016165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1860;AVGPOST=0.9979;RSQ=0.9944;ERATE=0.0005;THETA=0.0003;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 90016186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90016187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9868;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90016268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90016360 . TTCAC T 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7547;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90016420 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0212;AVGPOST=0.9997;RSQ=0.9937;ERATE=0.0003;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90016439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90016446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90016519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0155;AVGPOST=0.9993;RSQ=0.9790;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90016598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0134;AVGPOST=0.9982;RSQ=0.9561;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90016763 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90016868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6068;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90016885 . GTCA G 117 PASS INDEL;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6783;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90016895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2125;AVGPOST=0.9887;RSQ=0.9757;ERATE=0.0004;THETA=0.0005;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 90016967 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90016988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.1033;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90017105 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.879;LDAF=0.0199;AVGPOST=0.9960;RSQ=0.9109;ERATE=0.0006;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 90017188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1384;AVGPOST=0.9983;RSQ=0.9952;ERATE=0.0004;THETA=0.0004;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 90017212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0055;AVGPOST=0.9987;RSQ=0.8932;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90017255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1376;AVGPOST=0.9991;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 90017258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0078;AVGPOST=0.9986;RSQ=0.9361;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90017273 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4194;AVGPOST=0.9962;RSQ=0.9934;ERATE=0.0007;THETA=0.0006;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 90017328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9353;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90017342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0213;AVGPOST=0.9993;RSQ=0.9850;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90017492 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90017500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0227;AVGPOST=0.9973;RSQ=0.9507;ERATE=0.0003;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 90017516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90017522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5640;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90017555 . G GT 50 PASS INDEL;BAVGPOST=0.996;BRSQ=0.580;LDAF=0.0129;AVGPOST=0.9837;RSQ=0.5085;ERATE=0.0042;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90017604 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90017610 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6305;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90017712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4734;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90017719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1369;AVGPOST=0.9981;RSQ=0.9943;ERATE=0.0005;THETA=0.0005;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 90017848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6293;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90017937 . AG A 5401 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0501;AVGPOST=0.9963;RSQ=0.9716;ERATE=0.0004;THETA=0.0006;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 90018283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0219;AVGPOST=0.9990;RSQ=0.9800;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90018297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1957;AVGPOST=0.9980;RSQ=0.9949;ERATE=0.0003;THETA=0.0043;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 90018307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6993;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90018341 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90018732 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0123;AVGPOST=0.9982;RSQ=0.9502;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90018974 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4199;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0005;THETA=0.0002;AC=917;AN=2184 GT:DS:GL:BD 0.41987181 0
1 90019007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90019087 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7441;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90019244 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90019288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1926;AVGPOST=0.9974;RSQ=0.9938;ERATE=0.0005;THETA=0.0002;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 90019308 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4537;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90019388 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9994;RSQ=0.9761;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90019581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4207;AVGPOST=0.9970;RSQ=0.9952;ERATE=0.0004;THETA=0.0024;AC=920;AN=2184 GT:DS:GL:BD 0.42124543 0
1 90019636 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0212;AVGPOST=0.9997;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90019642 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.8556;AVGPOST=0.9882;RSQ=0.9655;ERATE=0.0005;THETA=0.0004;AC=1869;AN=2184 GT:DS:GL:BD 0.85576922 1
1 90019672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9581;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90019685 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0508;AVGPOST=0.9990;RSQ=0.9924;ERATE=0.0003;THETA=0.0006;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 90019711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7035;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90019713 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4090;AVGPOST=0.9971;RSQ=0.9953;ERATE=0.0006;THETA=0.0007;AC=892;AN=2184 GT:DS:GL:BD 0.40842491 0
1 90019753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1454;AVGPOST=0.9986;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 90019787 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6894;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90019921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2163;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0011;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 90019945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9986;RSQ=0.9062;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90019958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6751;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90020009 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90020311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0224;AVGPOST=0.9989;RSQ=0.9815;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 90020337 . A AT 1767 PASS INDEL;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0160;AVGPOST=0.9947;RSQ=0.8724;ERATE=0.0006;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90020401 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9150;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90020439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0078;AVGPOST=0.9987;RSQ=0.9373;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90020559 rs34254524 TC T 1011 PASS INDEL;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0091;AVGPOST=0.9988;RSQ=0.9442;ERATE=0.0004;THETA=0.0020;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90020825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90020929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6964;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90021168 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90021169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90021274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9991;RSQ=0.9211;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90021499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6842;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90021618 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8284;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90021634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9034;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90021638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90021878 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9501;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90021927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0251;AVGPOST=0.9991;RSQ=0.9860;ERATE=0.0004;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 90021951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0121;AVGPOST=0.9979;RSQ=0.9456;ERATE=0.0005;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90021989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1630;AVGPOST=0.9983;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 90022056 MERGED_DEL_2_4287 T <DEL> . . SV;BAVGPOST=0.997;BRSQ=0.637;LDAF=0.0090;AVGPOST=0.9851;RSQ=0.3465;ERATE=0.0038;THETA=0.0006;CIEND=-17,33;CIPOS=-18,19;END=90022827;SOURCE=GenomeStrip_90022056_90022827;SVTYPE=DEL;AC=5;AN=21 GT:DS:GL:BD 0.00228938 0
1 90022115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90022123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90022469 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90022687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90022765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5793;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90022796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4196;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=917;AN=2184 GT:DS:GL:BD 0.41987181 0
1 90022799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3527;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 90022826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90022846 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7298;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90022922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90022971 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3525;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0005;THETA=0.0003;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 90023244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.9192;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90023260 . GAC G 154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7252;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90023297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90023470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90023508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6944;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90023527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8366;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90023551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0052;AVGPOST=0.9986;RSQ=0.9097;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90023602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1362;AVGPOST=0.9993;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 90023634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0211;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90023693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0121;AVGPOST=0.9987;RSQ=0.9606;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90023737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90023756 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3254;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 90023768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4154;AVGPOST=0.9966;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 90024094 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3249;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 90024184 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90024199 . CTGTT C 1376 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9694;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90024217 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90024359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90024372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0003;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90024556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90024572 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90024576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90024647 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0502;AVGPOST=0.9990;RSQ=0.9921;ERATE=0.0004;THETA=0.0009;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 90024688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90024696 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90024721 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90024774 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1631;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 90025039 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7306;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90025172 . A AT 684 PASS INDEL;BAVGPOST=0.983;BRSQ=0.855;LDAF=0.0582;AVGPOST=0.9909;RSQ=0.9399;ERATE=0.0004;THETA=0.0004;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 90025464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90025519 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3226;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 90025620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1626;AVGPOST=0.9991;RSQ=0.9973;ERATE=0.0003;THETA=0.0001;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 90025657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4112;AVGPOST=0.9963;RSQ=0.9941;ERATE=0.0009;THETA=0.0004;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 90025661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90025689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3231;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0007;THETA=0.0006;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 90025699 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90025703 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90025789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90025850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90025908 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90025981 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.867;LDAF=0.3092;AVGPOST=0.9770;RSQ=0.9603;ERATE=0.0008;THETA=0.0008;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 90026067 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.462;LDAF=0.0049;AVGPOST=0.9927;RSQ=0.4300;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90027427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.852;LDAF=0.0105;AVGPOST=0.9955;RSQ=0.8317;ERATE=0.0006;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90027453 . CT C 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90027497 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90027521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7202;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90027568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8399;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90027582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0426;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 90027591 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6765;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90027637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9802;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90027643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0223;AVGPOST=0.9979;RSQ=0.9605;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90028000 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90028132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6140;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90028150 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9687;ERATE=0.0005;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90028307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6785;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90028334 . GC G 224 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90028362 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90028438 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0076;AVGPOST=0.9987;RSQ=0.9276;ERATE=0.0004;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90028450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90028682 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0330;AVGPOST=0.9970;RSQ=0.9667;ERATE=0.0004;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 90028688 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90028769 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6572;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90028843 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5595;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90028868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7516;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90028901 . AC A 158 PASS INDEL;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5326;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90028964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8170;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90028965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4917;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90029091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7410;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90029273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9575;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90029274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90029318 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7678;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90029786 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9940;ERATE=0.0004;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90029817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90030009 . TG T 644 PASS INDEL;BAVGPOST=0.997;BRSQ=0.737;LDAF=0.0060;AVGPOST=0.9965;RSQ=0.7523;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90030338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90030347 . TA T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90030380 . AG A 359 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8381;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90030408 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6288;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90030467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90030541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90030568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9855;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90030569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0068;AVGPOST=0.9999;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90030635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90030637 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90030658 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90030830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1698;AVGPOST=0.9956;RSQ=0.9878;ERATE=0.0004;THETA=0.0005;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 90030867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90030953 rs35181456 A AG 65784 PASS INDEL;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.4205;AVGPOST=0.9894;RSQ=0.9836;ERATE=0.0028;THETA=0.0010;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 90030965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90030965 . GA G 169 PASS INDEL;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5931;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90031110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9779;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90031348 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9985;RSQ=0.3764;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90031368 . TA T 417 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8714;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90031417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8935;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90031418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5348;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90031512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90031594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90031663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90031704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8649;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90031712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6939;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90031845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3012;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0018;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 90031914 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9315;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90031987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3322;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0005;THETA=0.0003;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 90032047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3307;AVGPOST=0.9973;RSQ=0.9951;ERATE=0.0007;THETA=0.0004;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 90032111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6813;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90032257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9635;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90032288 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90032384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0085;AVGPOST=0.9993;RSQ=0.9628;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90032484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0211;AVGPOST=0.9997;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90032569 . GGA G 555 PASS INDEL;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0058;AVGPOST=0.9990;RSQ=0.9210;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90032656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0049;AVGPOST=0.9987;RSQ=0.8919;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90032798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1632;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0004;THETA=0.0006;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 90032824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8117;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90032893 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3329;AVGPOST=0.9963;RSQ=0.9934;ERATE=0.0015;THETA=0.0005;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 90032940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3566;AVGPOST=0.9881;RSQ=0.9812;ERATE=0.0031;THETA=0.0003;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 90033252 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.963;LDAF=0.1273;AVGPOST=0.9879;RSQ=0.9611;ERATE=0.0010;THETA=0.0005;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 90033285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6373;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90033307 . AC A 1203 PASS INDEL;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0086;AVGPOST=0.9978;RSQ=0.8915;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90033333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8202;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90033430 . C CA 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5453;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90033491 . C CA 1212 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0116;AVGPOST=0.9990;RSQ=0.9609;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90033573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.9023;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90033657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90033947 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90033969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90034039 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5470;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90034072 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0501;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0003;THETA=0.0039;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 90034219 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5030;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90034283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90034502 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8201;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90034511 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7668;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90034631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8767;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90034737 . CAG C 1573 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9984;RSQ=0.9429;ERATE=0.0005;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90034742 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1635;AVGPOST=0.9981;RSQ=0.9951;ERATE=0.0004;THETA=0.0005;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 90034910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.957;LDAF=0.0479;AVGPOST=0.9986;RSQ=0.9880;ERATE=0.0003;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 90034966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90035027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8814;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90035056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8389;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90035116 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5867;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90035179 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3551;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=776;AN=2184 GT:DS:GL:BD 0.35531136 0
1 90035197 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0501;AVGPOST=0.9994;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 90035216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9992;RSQ=0.9549;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90035234 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9126;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90035542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0032;AVGPOST=0.9975;RSQ=0.6874;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90035606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6578;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90035738 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9694;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90035774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90035786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3131;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 90035823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7284;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90035867 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9128;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90035897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90035899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7394;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90035923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5027;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90035932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6193;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90036184 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90036210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8837;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90036215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7528;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90036341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9080;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90036406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0017;AVGPOST=0.9997;RSQ=0.9327;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90036441 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90036508 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.3137;AVGPOST=0.9877;RSQ=0.9801;ERATE=0.0028;THETA=0.0007;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 90036633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0500;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 90036668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90036694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3011;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0004;THETA=0.0011;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 90036702 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3011;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 90036747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.3008;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 90036877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8928;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90036923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1380;AVGPOST=0.9990;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 90037025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0212;AVGPOST=0.9996;RSQ=0.9917;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90037050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3013;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 90037055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7461;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90037056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90037069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90037107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0121;AVGPOST=0.9983;RSQ=0.9446;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90037226 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90037262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90037317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0500;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 90037321 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9219;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90037338 . C CT 949 PASS INDEL;BAVGPOST=0.977;BRSQ=0.573;LDAF=0.0508;AVGPOST=0.9452;RSQ=0.5473;ERATE=0.0168;THETA=0.0008;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 90037482 . AT A 166 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90037490 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5432;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90037494 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90037652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90037689 . GT G 232 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7541;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90037801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5746;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90038239 rs74652839 CTGTGG C 1217 PASS INDEL;BAVGPOST=0.995;BRSQ=0.793;LDAF=0.0119;AVGPOST=0.9933;RSQ=0.7890;ERATE=0.0004;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90038306 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6845;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90038579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90038588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3010;AVGPOST=0.9975;RSQ=0.9955;ERATE=0.0006;THETA=0.0003;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 90038654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9492;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90038696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7692;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90038720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.974;LDAF=0.3015;AVGPOST=0.9953;RSQ=0.9914;ERATE=0.0009;THETA=0.0005;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 90038783 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.957;LDAF=0.3823;AVGPOST=0.9735;RSQ=0.9591;ERATE=0.0029;THETA=0.0003;AC=832;AN=2184 GT:DS:GL:BD 0.38095239 0
1 90038815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0047;AVGPOST=0.9967;RSQ=0.7276;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90038952 . A AT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7089;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90038991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0029;AVGPOST=0.9957;RSQ=0.4500;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90038999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9994;RSQ=0.9769;ERATE=0.0003;THETA=0.0028;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90039033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.998;LDAF=0.3024;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0005;THETA=0.0006;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 90039401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6936;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90039491 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90039495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9992;RSQ=0.9456;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90039527 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3025;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0005;THETA=0.0009;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 90039593 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90039612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5104;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90039642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90039751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8639;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90039892 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90039946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90040013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90040045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8117;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90040147 . CT C 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0014;AVGPOST=0.9978;RSQ=0.3704;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90040161 . C CT 253 PASS INDEL;BAVGPOST=0.982;BRSQ=0.480;LDAF=0.0299;AVGPOST=0.9646;RSQ=0.5213;ERATE=0.0104;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 90040287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3029;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0004;THETA=0.0006;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 90040361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3017;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0009;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 90040606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90040694 . CAG C 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6100;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90040695 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9735;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90040758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3016;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0004;THETA=0.0003;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 90040771 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9989;RSQ=0.9635;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90040795 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.6218;ERATE=0.0008;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90040948 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90041053 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90041109 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0506;AVGPOST=0.9985;RSQ=0.9903;ERATE=0.0003;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 90041187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4194;AVGPOST=0.9956;RSQ=0.9938;ERATE=0.0006;THETA=0.0003;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 90041203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90041245 rs35418951 CT C 16050 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1390;AVGPOST=0.9917;RSQ=0.9756;ERATE=0.0017;THETA=0.0004;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 90041332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8208;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90041433 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9780;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90041522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.7156;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90041663 . GCA G 393 PASS INDEL;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8435;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90041681 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90041886 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8607;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90041899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4191;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0004;THETA=0.0006;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 90041939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1377;AVGPOST=0.9973;RSQ=0.9919;ERATE=0.0007;THETA=0.0011;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 90042029 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90042345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9809;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90042358 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90042507 . TCA T 9861 PASS INDEL;BAVGPOST=0.969;BRSQ=0.932;LDAF=0.3057;AVGPOST=0.9702;RSQ=0.9497;ERATE=0.0030;THETA=0.0005;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 90042508 rs72199379 CAG C 49897 PASS INDEL;BAVGPOST=0.703;BRSQ=0.560;LDAF=0.6263;AVGPOST=0.7802;RSQ=0.6850;ERATE=0.0121;THETA=0.0004;AC=1337;AN=2184 GT:DS:GL:BD 0.61217946 1
1 90042542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9893;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90042556 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90042621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0176;AVGPOST=0.9955;RSQ=0.8999;ERATE=0.0004;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90042745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3230;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 90042809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8475;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90042823 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90042994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90043036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9830;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90043191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90043236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3225;AVGPOST=0.9970;RSQ=0.9945;ERATE=0.0004;THETA=0.0002;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 90043240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3227;AVGPOST=0.9958;RSQ=0.9926;ERATE=0.0005;THETA=0.0003;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 90043272 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1626;AVGPOST=0.9979;RSQ=0.9943;ERATE=0.0004;THETA=0.0006;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 90043283 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0060;AVGPOST=0.9983;RSQ=0.8893;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90043331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.7015;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90043353 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90043469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90043577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7017;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90043708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90043804 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0215;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90043807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8324;ERATE=0.0007;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90043812 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0087;AVGPOST=0.9975;RSQ=0.9017;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90043960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90043984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0037;AVGPOST=0.9952;RSQ=0.5435;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90043998 rs112580898 T TA 44558 PASS INDEL;BAVGPOST=0.982;BRSQ=0.965;LDAF=0.3164;AVGPOST=0.9874;RSQ=0.9803;ERATE=0.0004;THETA=0.0003;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 90043999 . A AG 11365 PASS INDEL;BAVGPOST=0.979;BRSQ=0.960;LDAF=0.3152;AVGPOST=0.9847;RSQ=0.9761;ERATE=0.0009;THETA=0.0005;AC=695;AN=2184 GT:DS:GL:BD 0.31822345 0
1 90044056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90044096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90044165 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3310;AVGPOST=0.9968;RSQ=0.9943;ERATE=0.0006;THETA=0.0004;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 90044300 rs5776022 CT C 18756 PASS INDEL;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.3335;AVGPOST=0.9911;RSQ=0.9846;ERATE=0.0009;THETA=0.0004;AC=727;AN=2184 GT:DS:GL:BD 0.33287546 0
1 90044453 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3305;AVGPOST=0.9965;RSQ=0.9939;ERATE=0.0006;THETA=0.0005;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 90044480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5198;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90044520 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3919;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90044560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9989;RSQ=0.9670;ERATE=0.0004;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90044563 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90044567 . ATTAAC A 302 PASS INDEL;BAVGPOST=0.998;BRSQ=0.745;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6597;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90044749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90044765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90044773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90045006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90045031 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5946;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90045072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6607;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90045074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4800;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90045217 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9714;ERATE=0.0004;THETA=0.0014;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90045222 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6143;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90045233 . A AT 10 PASS INDEL;BAVGPOST=0.998;BRSQ=0.605;LDAF=0.0053;AVGPOST=0.9953;RSQ=0.6428;ERATE=0.0009;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90045266 . A AG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4321;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90045576 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8839;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90045590 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90045723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9734;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90045730 . A AG 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4821;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90045882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7809;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90045922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3303;AVGPOST=0.9967;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 90045923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8938;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90045961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9490;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90045973 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3516;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=768;AN=2184 GT:DS:GL:BD 0.35164836 0
1 90045992 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9539;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90046119 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90046155 . GT G 894 PASS INDEL;BAVGPOST=0.997;BRSQ=0.815;LDAF=0.0079;AVGPOST=0.9980;RSQ=0.8939;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90046205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0213;AVGPOST=0.9995;RSQ=0.9912;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90046251 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90046275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90046494 . G GT 1526 PASS INDEL;BAVGPOST=0.996;BRSQ=0.790;LDAF=0.0088;AVGPOST=0.9981;RSQ=0.9072;ERATE=0.0006;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90046550 . AG A 128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90046593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3303;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0005;THETA=0.0003;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 90046598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5678;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90046639 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0147;AVGPOST=0.9980;RSQ=0.9443;ERATE=0.0004;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90046673 . AC A 225 PASS INDEL;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8329;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90046719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5627;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90046751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5130;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90046814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5980;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90047032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0046;AVGPOST=0.9973;RSQ=0.7678;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90047050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8727;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90047068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3340;AVGPOST=0.9958;RSQ=0.9932;ERATE=0.0010;THETA=0.0007;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 90047091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6657;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90047411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7839;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90047540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90047589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1369;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0003;THETA=0.0038;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 90047808 rs36034723 A AG 1895 PASS INDEL;BAVGPOST=0.916;BRSQ=0.659;LDAF=0.1415;AVGPOST=0.8933;RSQ=0.6617;ERATE=0.0207;THETA=0.0008;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 90047900 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0457;AVGPOST=0.9985;RSQ=0.9872;ERATE=0.0006;THETA=0.0102;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 90048132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1745;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 90048168 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90048177 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90048189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90048192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90048248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1605;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 90048289 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90048326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9946;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90048335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90048352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90048411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90048531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90048689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90048782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90048812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90048950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90049040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1695;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0013;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 90049053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90049061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90049063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90049071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0205;AVGPOST=1.0000;RSQ=0.9989;ERATE=0.0003;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 90049088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90049111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90049160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90049219 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90049220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90049439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90049462 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90049498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90049615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0170;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 90049789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90050215 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90050230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90050285 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90050410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90050456 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90050644 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8763;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90050758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90050772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90050831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3417;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 90050923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7335;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90051034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8419;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90051042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8907;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90051225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3425;AVGPOST=0.9964;RSQ=0.9941;ERATE=0.0004;THETA=0.0003;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 90051282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9631;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90051375 . AAAAG A 134 PASS INDEL;BAVGPOST=0.998;BRSQ=0.791;LDAF=0.0053;AVGPOST=0.9950;RSQ=0.6380;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90051433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90051486 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8421;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90051553 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9421;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90051619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0222;AVGPOST=0.9975;RSQ=0.9633;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90051772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7665;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90051807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8388;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90051850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0047;AVGPOST=0.9993;RSQ=0.9338;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90052055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90052062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0155;AVGPOST=0.9987;RSQ=0.9625;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90052113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90052252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90052460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4491;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90052626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3322;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0005;THETA=0.0004;AC=725;AN=2184 GT:DS:GL:BD 0.33195969 0
1 90052847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6519;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90052945 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0032;AVGPOST=0.9976;RSQ=0.6945;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90053017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0051;AVGPOST=0.9958;RSQ=0.6928;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90053114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0119;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90053122 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0096;AVGPOST=0.9998;RSQ=0.9922;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90053167 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3301;AVGPOST=0.9991;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 90053245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3802;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=831;AN=2184 GT:DS:GL:BD 0.38049451 0
1 90053322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90053344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8796;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90053394 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9689;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90053421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9858;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90053449 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6272;AVGPOST=0.9917;RSQ=0.9867;ERATE=0.0007;THETA=0.0004;AC=1371;AN=2184 GT:DS:GL:BD 0.62774724 1
1 90053530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0082;AVGPOST=0.9984;RSQ=0.9260;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90053556 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5519;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90053563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3799;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0004;THETA=0.0005;AC=830;AN=2184 GT:DS:GL:BD 0.38003662 0
1 90053575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8517;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90053587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8639;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90053598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90053705 . A AC 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90053709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7441;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90053716 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90053752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90053764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90053808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90053811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90053812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9905;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90053817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90053999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9744;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90054027 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9866;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90054029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8937;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90054201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90054320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0041;AVGPOST=0.9993;RSQ=0.9249;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90054449 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0156;AVGPOST=0.9987;RSQ=0.9719;ERATE=0.0003;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90054481 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8161;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90054658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0040;AVGPOST=0.9966;RSQ=0.6863;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90054873 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90054904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6697;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90054946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9197;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90054977 . A AG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4979;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90055030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6413;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90055199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90055472 rs35390058 AT A 14197 PASS INDEL;BAVGPOST=0.983;BRSQ=0.947;LDAF=0.1650;AVGPOST=0.9865;RSQ=0.9668;ERATE=0.0019;THETA=0.0008;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 90055476 . TG T 277 PASS INDEL;BAVGPOST=0.939;BRSQ=0.769;LDAF=0.1301;AVGPOST=0.9513;RSQ=0.8618;ERATE=0.0008;THETA=0.0007;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 90055527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8544;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90055734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6919;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90055739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9360;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90055964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5220;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90056216 . AAG A 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90056390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90056397 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8650;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90056486 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90056522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90056555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7403;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90056697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7938;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90056773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6034;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90056795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90056858 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90056915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0128;AVGPOST=0.9979;RSQ=0.9302;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90056958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90057056 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9162;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90057062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90057131 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90057137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9526;ERATE=0.0003;THETA=0.0043;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90057175 . TACA T 291 PASS INDEL;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0038;AVGPOST=0.9976;RSQ=0.7577;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90057329 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9857;ERATE=0.0004;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90057394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1691;AVGPOST=0.9974;RSQ=0.9929;ERATE=0.0004;THETA=0.0009;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 90057415 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0116;AVGPOST=0.9986;RSQ=0.9606;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90057448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90057827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4651;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90058374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90058410 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90058465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90058581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90058628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90058631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90058708 . CG C 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5149;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90058860 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.411;LDAF=0.0141;AVGPOST=0.9801;RSQ=0.4902;ERATE=0.0041;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90058885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.963;LDAF=0.1389;AVGPOST=0.9959;RSQ=0.9870;ERATE=0.0004;THETA=0.0007;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 90059053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90059054 . ACTGAGTGT A 1036 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0036;AVGPOST=0.9971;RSQ=0.6997;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90059175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90059213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8400;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90059230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.8335;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90059327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6409;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90059357 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0053;AVGPOST=0.9988;RSQ=0.9167;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90059380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8673;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90059384 . AT A 35 PASS INDEL;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4271;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90059474 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7552;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90059494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90059575 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3775;AVGPOST=0.9917;RSQ=0.9861;ERATE=0.0028;THETA=0.0047;AC=822;AN=2184 GT:DS:GL:BD 0.37637362 0
1 90059688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6802;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90059735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0194;AVGPOST=0.9984;RSQ=0.9684;ERATE=0.0003;THETA=0.0010;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 90059869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5595;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90059921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5332;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90059962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0127;AVGPOST=0.9961;RSQ=0.8783;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90059965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.869;LDAF=0.0105;AVGPOST=0.9951;RSQ=0.8157;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90059979 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6684;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90059988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6054;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90060086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0033;AVGPOST=0.9973;RSQ=0.6966;ERATE=0.0005;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90060089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0212;AVGPOST=0.9994;RSQ=0.9858;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90060191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9204;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90060652 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7172;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90060791 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0140;AVGPOST=0.9992;RSQ=0.9741;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90060824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.915;LDAF=0.9902;AVGPOST=0.9992;RSQ=0.9622;ERATE=0.0003;THETA=0.0022;AC=2163;AN=2184 GT:DS:GL:BD 0.99038464 1
1 90060988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90061014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1599;AVGPOST=0.9967;RSQ=0.9916;ERATE=0.0004;THETA=0.0006;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 90061021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6430;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90061051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0074;AVGPOST=0.9991;RSQ=0.9468;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90061437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90061450 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0119;AVGPOST=0.9991;RSQ=0.9770;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90061467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7627;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90061576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9486;ERATE=0.0003;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90061609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8759;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90061616 . G GT 123 PASS INDEL;BAVGPOST=0.991;BRSQ=0.520;LDAF=0.0166;AVGPOST=0.9776;RSQ=0.4474;ERATE=0.0076;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90061627 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8187;ERATE=0.0003;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90061669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90062213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0063;AVGPOST=0.9996;RSQ=0.9775;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90062219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6160;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90062321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9080;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90062478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7199;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90062625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90062853 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90062863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90063180 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1601;AVGPOST=0.9986;RSQ=0.9955;ERATE=0.0005;THETA=0.0005;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 90063183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5902;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90063310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9839;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90063321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90063586 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0070;AVGPOST=0.9992;RSQ=0.9556;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90063613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1595;AVGPOST=0.9986;RSQ=0.9961;ERATE=0.0004;THETA=0.0007;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 90063629 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90063637 . CG C 847 PASS INDEL;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0099;AVGPOST=0.9980;RSQ=0.9287;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90063643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5550;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90063657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0104;AVGPOST=0.9974;RSQ=0.9035;ERATE=0.0005;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90063710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90063740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0071;AVGPOST=0.9986;RSQ=0.9144;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90063833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7089;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90063846 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1609;AVGPOST=0.9977;RSQ=0.9931;ERATE=0.0007;THETA=0.0008;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 90063906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0118;AVGPOST=0.9990;RSQ=0.9700;ERATE=0.0003;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90063918 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90063921 . GCA G 516 PASS INDEL;BAVGPOST=0.976;BRSQ=0.733;LDAF=0.0605;AVGPOST=0.9521;RSQ=0.6543;ERATE=0.0326;THETA=0.0017;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 90064077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90064129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5424;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90064132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90064150 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8825;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90064217 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90064341 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7258;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90064449 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8655;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90064557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8514;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90064558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90065039 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6200;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90065106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9561;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90065162 . CCTT C 118 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5055;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90065171 . TC T 1071 PASS INDEL;BAVGPOST=0.997;BRSQ=0.848;LDAF=0.0094;AVGPOST=0.9962;RSQ=0.8363;ERATE=0.0004;THETA=0.0016;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90065293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.1901;AVGPOST=0.9919;RSQ=0.9805;ERATE=0.0018;THETA=0.0019;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 90065364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90065450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0004;THETA=0.0088;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90065471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.963;LDAF=0.2042;AVGPOST=0.9787;RSQ=0.9543;ERATE=0.0005;THETA=0.0025;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 90065479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8313;ERATE=0.0004;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90065481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9199;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90065516 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9994;RSQ=0.9879;ERATE=0.0003;THETA=0.0138;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 90065603 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9399;ERATE=0.0003;THETA=0.0028;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90065609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9456;ERATE=0.0003;THETA=0.0029;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90065613 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.9095;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90065624 . TC T 12 PASS INDEL;BAVGPOST=0.982;BRSQ=0.683;LDAF=0.0725;AVGPOST=0.9228;RSQ=0.5755;ERATE=0.0036;THETA=0.0007;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 90065626 . CA C 4843 PASS INDEL;BAVGPOST=0.993;BRSQ=0.945;LDAF=0.0443;AVGPOST=0.9946;RSQ=0.9471;ERATE=0.0006;THETA=0.0029;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 90065630 . AC A 41 PASS INDEL;BAVGPOST=0.958;BRSQ=0.555;LDAF=0.0581;AVGPOST=0.9444;RSQ=0.5792;ERATE=0.0029;THETA=0.0115;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 90065731 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0058;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90065751 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90065763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0063;AVGPOST=0.9980;RSQ=0.8739;ERATE=0.0003;THETA=0.0075;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90065773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.7103;ERATE=0.0014;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90065774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7464;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90065844 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90065851 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0053;AVGPOST=0.9987;RSQ=0.9186;ERATE=0.0012;THETA=0.0031;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90065899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8904;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90065911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9371;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90065914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90065925 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0139;AVGPOST=0.9980;RSQ=0.9495;ERATE=0.0004;THETA=0.0017;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90066019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9254;ERATE=0.0003;THETA=0.0039;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90066052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0424;AVGPOST=0.9991;RSQ=0.9914;ERATE=0.0003;THETA=0.0212;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 90066090 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0177;AVGPOST=0.9989;RSQ=0.9770;ERATE=0.0004;THETA=0.0106;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 90066111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9517;ERATE=0.0003;THETA=0.0112;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90066205 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.966;LDAF=0.0618;AVGPOST=0.9949;RSQ=0.9696;ERATE=0.0027;THETA=0.0061;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 90066263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90066291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90066303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0283;AVGPOST=0.9966;RSQ=0.9526;ERATE=0.0003;THETA=0.0231;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 90066310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9766;ERATE=0.0007;THETA=0.0084;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90066380 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0289;AVGPOST=0.9992;RSQ=0.9877;ERATE=0.0006;THETA=0.0092;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 90066415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.937;LDAF=0.3069;AVGPOST=0.9645;RSQ=0.9433;ERATE=0.0100;THETA=0.0062;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 90066496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9624;ERATE=0.0003;THETA=0.0361;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90066545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0059;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90066652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0441;AVGPOST=0.9973;RSQ=0.9808;ERATE=0.0004;THETA=0.0061;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 90066702 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0111;AVGPOST=0.9988;RSQ=0.9621;ERATE=0.0003;THETA=0.0022;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90066717 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.953;LDAF=0.5581;AVGPOST=0.9719;RSQ=0.9587;ERATE=0.0037;THETA=0.0035;AC=1218;AN=2184 GT:DS:GL:BD 0.55769229 1
1 90066719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0148;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90066723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0120;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90066780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9768;ERATE=0.0003;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90066806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.963;LDAF=0.3215;AVGPOST=0.9777;RSQ=0.9651;ERATE=0.0042;THETA=0.0046;AC=697;AN=2184 GT:DS:GL:BD 0.31913918 0
1 90066862 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90066938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7840;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90067030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8139;ERATE=0.0003;THETA=0.0070;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90067153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0140;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90067165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0152;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90067221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0110;AVGPOST=0.9974;RSQ=0.9172;ERATE=0.0003;THETA=0.0141;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90067302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4532;AVGPOST=0.9958;RSQ=0.9936;ERATE=0.0005;THETA=0.0007;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 90067321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90067341 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0185;AVGPOST=0.9995;RSQ=0.9884;ERATE=0.0003;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 90067353 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4492;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 90067490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.4689;AVGPOST=0.9915;RSQ=0.9873;ERATE=0.0026;THETA=0.0006;AC=1025;AN=2184 GT:DS:GL:BD 0.46932235 0
1 90067521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90067522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9997;RSQ=0.0831;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90067602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4694;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=1027;AN=2184 GT:DS:GL:BD 0.47023809 0
1 90067656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90067665 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0003;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90067973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9274;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90068275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4269;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0005;THETA=0.0005;AC=933;AN=2184 GT:DS:GL:BD 0.42719781 0
1 90068298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0070;AVGPOST=0.9989;RSQ=0.9337;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90068319 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90068373 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.4272;ERATE=0.0003;THETA=0.0025;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90068443 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9714;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90068730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90068748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7958;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90068888 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6927;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90068928 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5434;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90069025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4346;AVGPOST=0.9954;RSQ=0.9933;ERATE=0.0004;THETA=0.0007;AC=949;AN=2184 GT:DS:GL:BD 0.43452382 0
1 90069026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.680;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6959;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90069248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.975;LDAF=0.1731;AVGPOST=0.9924;RSQ=0.9782;ERATE=0.0003;THETA=0.0007;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 90069328 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0221;AVGPOST=0.9981;RSQ=0.9704;ERATE=0.0005;THETA=0.0017;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 90069344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90069452 . TCATA T 206 PASS INDEL;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5183;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90069572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6555;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90069583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90069615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90069640 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.977;LDAF=0.3826;AVGPOST=0.9883;RSQ=0.9828;ERATE=0.0011;THETA=0.0036;AC=835;AN=2184 GT:DS:GL:BD 0.38232601 0
1 90069778 MERGED_DEL_2_4288 TGAAAGCTGAGGCTGACCCTTTATCACTGGCTTTCCTCCCAGAGTCTGACCTAGGGCAAATAGATGCCTGACAGTTTTAAGTTCTCCAGTTTCTGTTCAGCTGAGACCTGAGTGTCAGGTCAGCTAACAGGCTCCCCGTTGGAGAAACATGACTCTAGGTTTCAGTGCACTGAGAGATGTTAACTTCTGC T . . SV;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0009;CIEND=-17,33;CIPOS=-18,19;END=90075288;HOMLEN=1;HOMSEQ=G;SOURCE=GenomeStrip_90069754_90075263;SVL GT:DS:GL:BD 0.00045788 0
1 90070016 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90070061 . CTA C 147 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7572;ERATE=0.0004;THETA=0.0058;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90070084 . TG T 771 PASS INDEL;BAVGPOST=0.998;BRSQ=0.812;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8466;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90070128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90070403 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90070420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0060;AVGPOST=0.9982;RSQ=0.8809;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90070476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90070539 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9269;ERATE=0.0003;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90070601 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90070711 . T TA 184 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5041;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90070754 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90070778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90071119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90071153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7564;ERATE=0.0005;THETA=0.0075;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90071178 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8121;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90071293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2065;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0003;THETA=0.0006;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 90071297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2066;AVGPOST=0.9980;RSQ=0.9951;ERATE=0.0003;THETA=0.0007;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 90071308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7183;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90071319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2065;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 90071320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90071445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5842;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90071481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90071607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2065;AVGPOST=0.9987;RSQ=0.9967;ERATE=0.0004;THETA=0.0006;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 90071654 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90071709 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90071729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90071802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7561;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90071810 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=0.9992;RSQ=0.9788;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90071905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0128;AVGPOST=0.9996;RSQ=0.9866;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90071950 . GC G 149 PASS INDEL;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90072317 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0073;AVGPOST=0.9998;RSQ=0.9850;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90072411 . AG A 84 PASS INDEL;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90072496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7923;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90072529 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8802;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90072627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7840;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90072664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90072820 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5316;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90072888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2914;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0005;THETA=0.0004;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 90072894 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90072960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5096;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90073013 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0891;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 90073167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2914;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 90073191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5650;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90073223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0034;AVGPOST=0.9969;RSQ=0.6660;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90073351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90073389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2912;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0004;THETA=0.0007;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 90073402 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0909;AVGPOST=0.9987;RSQ=0.9949;ERATE=0.0004;THETA=0.0006;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 90073453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0146;AVGPOST=0.9974;RSQ=0.9295;ERATE=0.0010;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90073617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90073674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90073708 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9220;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90073716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8431;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90073808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2910;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 90073809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90073823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90073829 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8255;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90073853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1902;AVGPOST=0.9994;RSQ=0.9982;ERATE=0.0003;THETA=0.0007;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 90073914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9763;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90073917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1902;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0004;THETA=0.0006;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 90073948 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0060;AVGPOST=0.9985;RSQ=0.8919;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90073999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0219;AVGPOST=0.9949;RSQ=0.9125;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90074011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.976;LDAF=0.2795;AVGPOST=0.9800;RSQ=0.9701;ERATE=0.0009;THETA=0.0004;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 90074067 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7914;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90074072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2911;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0004;THETA=0.0005;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 90074178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0147;AVGPOST=0.9995;RSQ=0.9867;ERATE=0.0003;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90074215 . AACTG A 4956 PASS INDEL;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0231;AVGPOST=0.9992;RSQ=0.9858;ERATE=0.0004;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 90074228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8042;ERATE=0.0003;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90074307 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.916;LDAF=0.0174;AVGPOST=0.9955;RSQ=0.9048;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90074339 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9316;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90074344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0132;AVGPOST=0.9991;RSQ=0.9703;ERATE=0.0004;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90074391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4527;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90074479 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90074570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90074642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9990;RSQ=0.9462;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90074647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9477;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90074742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90074789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0894;AVGPOST=0.9990;RSQ=0.9954;ERATE=0.0005;THETA=0.0005;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 90074821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7484;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90074860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4409;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90074862 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90074877 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0130;AVGPOST=0.9985;RSQ=0.9531;ERATE=0.0004;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90074967 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0119;AVGPOST=0.9977;RSQ=0.9343;ERATE=0.0004;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90074968 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0120;AVGPOST=0.9975;RSQ=0.9308;ERATE=0.0004;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90075044 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90075087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8288;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90075138 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9171;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90075234 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7165;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90075250 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90075253 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8537;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90075296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9937;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 90075298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0146;AVGPOST=0.9981;RSQ=0.9573;ERATE=0.0004;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90075411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0143;AVGPOST=0.9993;RSQ=0.9805;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90075438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8696;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90075470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90075566 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0894;AVGPOST=0.9989;RSQ=0.9954;ERATE=0.0004;THETA=0.0011;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 90075570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90075596 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0180;AVGPOST=0.9995;RSQ=0.9866;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 90075604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2930;AVGPOST=0.9967;RSQ=0.9936;ERATE=0.0006;THETA=0.0006;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 90075618 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2919;AVGPOST=0.9972;RSQ=0.9952;ERATE=0.0007;THETA=0.0004;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 90075656 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0910;AVGPOST=0.9987;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 90076061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0086;AVGPOST=0.9977;RSQ=0.8899;ERATE=0.0006;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90076094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0101;AVGPOST=0.9987;RSQ=0.9409;ERATE=0.0004;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90076253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8892;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90076415 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0188;AVGPOST=0.9980;RSQ=0.9536;ERATE=0.0004;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 90076434 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1905;AVGPOST=0.9973;RSQ=0.9938;ERATE=0.0004;THETA=0.0008;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 90076450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8209;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90076544 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90076645 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2917;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0004;THETA=0.0006;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 90077031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6920;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90077053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8938;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90077102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0096;AVGPOST=0.9970;RSQ=0.8666;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90077184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1902;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0005;THETA=0.0007;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 90077240 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7228;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90077293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0112;AVGPOST=0.9985;RSQ=0.9491;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90077316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1903;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 90077462 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2917;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0006;THETA=0.0005;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 90077493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90077506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0137;AVGPOST=0.9976;RSQ=0.9345;ERATE=0.0004;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90077723 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2921;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0006;THETA=0.0005;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 90077832 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90077854 . CT C 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5396;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90077905 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2917;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0005;THETA=0.0008;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 90078261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.948;LDAF=0.2821;AVGPOST=0.9871;RSQ=0.9783;ERATE=0.0010;THETA=0.0010;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 90078264 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.947;LDAF=0.2803;AVGPOST=0.9874;RSQ=0.9797;ERATE=0.0007;THETA=0.0003;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 90078271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6457;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90078319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0236;AVGPOST=0.9988;RSQ=0.9816;ERATE=0.0004;THETA=0.0015;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 90078356 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7374;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90078389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7135;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90078395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2910;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0005;THETA=0.0012;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 90078520 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1882;AVGPOST=0.9972;RSQ=0.9940;ERATE=0.0005;THETA=0.0007;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 90078656 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0906;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 90078850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8375;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90078907 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.425;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4979;ERATE=0.0005;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90078999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3157;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90079034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0906;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0004;THETA=0.0006;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 90079329 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0548;AVGPOST=0.9988;RSQ=0.9900;ERATE=0.0005;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 90079379 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7605;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90079499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90079526 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8225;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90079535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0237;AVGPOST=0.9986;RSQ=0.9783;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 90079625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6892;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90079649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8260;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90079663 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.8029;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90079678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2924;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0006;THETA=0.0006;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 90079719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0906;AVGPOST=0.9988;RSQ=0.9950;ERATE=0.0005;THETA=0.0004;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 90079767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9098;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90079921 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90080082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90080311 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0141;AVGPOST=0.9991;RSQ=0.9760;ERATE=0.0004;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90080340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2009;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0004;THETA=0.0008;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 90080384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0456;AVGPOST=0.9982;RSQ=0.9852;ERATE=0.0005;THETA=0.0006;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 90080418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0214;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0003;THETA=0.0011;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90080475 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90080557 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2011;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0005;THETA=0.0006;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 90080635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2914;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0003;THETA=0.0008;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 90080681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90080775 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0898;AVGPOST=0.9986;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 90080799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9724;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90080865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2008;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 90080953 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90080977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1863;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0005;THETA=0.0012;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 90080978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8558;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90080988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90081045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90081095 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0907;AVGPOST=0.9996;RSQ=0.9981;ERATE=0.0003;THETA=0.0010;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 90081108 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6635;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90081163 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0907;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0003;THETA=0.0007;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 90081217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90081477 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0123;AVGPOST=0.9995;RSQ=0.9827;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90081528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90081582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8950;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90081668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7469;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90081915 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9433;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90081960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90081976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6790;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90082009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90082055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90082156 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90082224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1861;AVGPOST=0.9970;RSQ=0.9931;ERATE=0.0004;THETA=0.0004;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 90082248 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0892;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0003;THETA=0.0008;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 90082257 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90082271 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2909;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0005;THETA=0.0007;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 90082281 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0050;AVGPOST=0.9983;RSQ=0.8490;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90082289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90082360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90082574 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0906;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0008;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 90082809 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90082812 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0287;AVGPOST=0.9983;RSQ=0.9749;ERATE=0.0003;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 90082909 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.947;LDAF=0.0146;AVGPOST=0.9983;RSQ=0.9513;ERATE=0.0004;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90082989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8297;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90083128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0215;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90083129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7530;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90083201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90083313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90083357 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90083400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.6023;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90083452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7895;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90083596 . T TTA 80 PASS INDEL;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0031;AVGPOST=0.9968;RSQ=0.6199;ERATE=0.0007;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90083652 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6077;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90083655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90083714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5052;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90083715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90083733 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8325;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90083739 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8529;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90083911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7706;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90083922 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90084357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6393;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90084595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6347;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90084701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6200;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90084786 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90084879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.773;LDAF=0.0063;AVGPOST=0.9977;RSQ=0.8568;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90084885 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2003;AVGPOST=0.9942;RSQ=0.9853;ERATE=0.0010;THETA=0.0008;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 90084949 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0230;AVGPOST=0.9959;RSQ=0.9338;ERATE=0.0009;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90085019 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.462;LDAF=0.0099;AVGPOST=0.9871;RSQ=0.4926;ERATE=0.0011;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90085020 . CA C 78 PASS INDEL;BAVGPOST=0.997;BRSQ=0.477;LDAF=0.0072;AVGPOST=0.9889;RSQ=0.4205;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90085171 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1862;AVGPOST=0.9966;RSQ=0.9907;ERATE=0.0004;THETA=0.0004;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 90085266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1867;AVGPOST=0.9964;RSQ=0.9902;ERATE=0.0007;THETA=0.0012;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 90085436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6860;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90085489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7461;ERATE=0.0004;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90085552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0217;AVGPOST=0.9995;RSQ=0.9898;ERATE=0.0004;THETA=0.0013;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90085580 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90085641 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90085879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8772;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90085992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0194;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0003;THETA=0.0014;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 90086014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5051;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90086045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4921;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90086123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0491;AVGPOST=0.9957;RSQ=0.9727;ERATE=0.0005;THETA=0.0028;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 90086303 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90086306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0217;AVGPOST=0.9982;RSQ=0.9743;ERATE=0.0003;THETA=0.0046;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90086394 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8129;ERATE=0.0009;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90086687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0194;AVGPOST=0.9994;RSQ=0.9880;ERATE=0.0003;THETA=0.0037;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 90086771 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.442;LDAF=0.0065;AVGPOST=0.9887;RSQ=0.3350;ERATE=0.0017;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90086794 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.574;LDAF=0.0065;AVGPOST=0.9927;RSQ=0.5329;ERATE=0.0006;THETA=0.0020;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90086835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.393;LDAF=0.0037;AVGPOST=0.9960;RSQ=0.5605;ERATE=0.0007;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90086885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.437;LDAF=0.0708;AVGPOST=0.9163;RSQ=0.5163;ERATE=0.0103;THETA=0.0013;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 90086981 . T TCG 39 PASS INDEL;BAVGPOST=0.998;BRSQ=0.614;LDAF=0.0035;AVGPOST=0.9960;RSQ=0.4994;ERATE=0.0010;THETA=0.0095;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90087018 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0149;AVGPOST=0.9958;RSQ=0.8987;ERATE=0.0005;THETA=0.0017;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90087154 . AG A 127 PASS INDEL;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0035;AVGPOST=0.9966;RSQ=0.6001;ERATE=0.0012;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90087412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5638;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90087451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90087511 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5737;AVGPOST=0.9964;RSQ=0.9948;ERATE=0.0003;THETA=0.0022;AC=1253;AN=2184 GT:DS:GL:BD 0.57371795 1
1 90087543 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5750;AVGPOST=0.9951;RSQ=0.9927;ERATE=0.0004;THETA=0.0005;AC=1257;AN=2184 GT:DS:GL:BD 0.57554942 1
1 90087679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9995;RSQ=0.9830;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90087731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6667;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90087738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4926;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90087890 . TA T 6274 PASS INDEL;BAVGPOST=0.945;BRSQ=0.831;LDAF=0.1752;AVGPOST=0.9400;RSQ=0.8446;ERATE=0.0034;THETA=0.0012;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 90087893 . A ATTTT 5197 PASS INDEL;BAVGPOST=0.912;BRSQ=0.637;LDAF=0.1544;AVGPOST=0.9047;RSQ=0.7268;ERATE=0.0105;THETA=0.0010;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 90087974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0078;AVGPOST=0.9935;RSQ=0.6806;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90087986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0085;AVGPOST=0.9943;RSQ=0.7561;ERATE=0.0005;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90088129 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.690;LDAF=0.0070;AVGPOST=0.9958;RSQ=0.7721;ERATE=0.0005;THETA=0.0034;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90088136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0058;AVGPOST=0.9985;RSQ=0.8822;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90088183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0605;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0003;THETA=0.0009;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 90088697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5868;AVGPOST=0.9963;RSQ=0.9945;ERATE=0.0005;THETA=0.0007;AC=1282;AN=2184 GT:DS:GL:BD 0.58699632 1
1 90088798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5838;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90088804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8051;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90088806 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4792;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90088895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5723;AVGPOST=0.9961;RSQ=0.9942;ERATE=0.0006;THETA=0.0006;AC=1250;AN=2184 GT:DS:GL:BD 0.57234430 1
1 90088976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8786;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90089099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0047;AVGPOST=0.9956;RSQ=0.6279;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90089105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.969;LDAF=0.5677;AVGPOST=0.9877;RSQ=0.9808;ERATE=0.0015;THETA=0.0029;AC=1247;AN=2184 GT:DS:GL:BD 0.57097071 1
1 90089230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.695;LDAF=0.0144;AVGPOST=0.9867;RSQ=0.6509;ERATE=0.0005;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90089256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0028;AVGPOST=0.9968;RSQ=0.5051;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90089280 . C CA 632 PASS INDEL;BAVGPOST=0.968;BRSQ=0.527;LDAF=0.0551;AVGPOST=0.9396;RSQ=0.5374;ERATE=0.0146;THETA=0.0009;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 90089297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0946;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 90089396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90089490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5841;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90089515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0105;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90089599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90089712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0120;AVGPOST=0.9984;RSQ=0.9532;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90089731 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90089741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8067;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90089879 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90089920 . AAT A 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5198;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90089935 . T TA 133 PASS INDEL;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5063;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90090158 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90090173 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5730;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90090235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7334;ERATE=0.0004;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90090444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.2385;ERATE=0.0004;THETA=0.0022;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90090594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90090737 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90090793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8891;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90090794 rs11287925 TA T 2846 PASS INDEL;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0220;AVGPOST=0.9983;RSQ=0.9703;ERATE=0.0004;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90090797 rs11287926 CT C 2739 PASS INDEL;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0219;AVGPOST=0.9973;RSQ=0.9492;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90090804 rs10552750 TAA T 3835 PASS INDEL;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0220;AVGPOST=0.9982;RSQ=0.9685;ERATE=0.0004;THETA=0.0014;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90090932 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0387;AVGPOST=0.9994;RSQ=0.9936;ERATE=0.0003;THETA=0.0008;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 90091137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90091169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90091174 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90091484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8673;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90091577 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5274;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0004;THETA=0.0006;AC=1153;AN=2184 GT:DS:GL:BD 0.52793038 1
1 90091598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.914;LDAF=0.0210;AVGPOST=0.9956;RSQ=0.9242;ERATE=0.0003;THETA=0.0009;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 90091667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.9054;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90091771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90091847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7748;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90091890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6178;AVGPOST=0.9974;RSQ=0.9956;ERATE=0.0006;THETA=0.0004;AC=1349;AN=2184 GT:DS:GL:BD 0.61767399 1
1 90091899 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90091906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90092046 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90092086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0203;AVGPOST=0.9989;RSQ=0.9824;ERATE=0.0003;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 90092412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90092430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90092526 . A ACACG 296 PASS INDEL;BAVGPOST=0.982;BRSQ=0.587;LDAF=0.0371;AVGPOST=0.9569;RSQ=0.5089;ERATE=0.0084;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 90092829 . AAT A 118 PASS INDEL;BAVGPOST=0.986;BRSQ=0.518;LDAF=0.0362;AVGPOST=0.9551;RSQ=0.4874;ERATE=0.0066;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 90092930 rs71651092 ACTCT A 60205 PASS INDEL;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.5261;AVGPOST=0.9887;RSQ=0.9829;ERATE=0.0029;THETA=0.0004;AC=1148;AN=2184 GT:DS:GL:BD 0.52564102 1
1 90092975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9822;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90093015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6348;AVGPOST=0.9961;RSQ=0.9936;ERATE=0.0007;THETA=0.0004;AC=1387;AN=2184 GT:DS:GL:BD 0.63507324 1
1 90093056 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90093083 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4850;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90093104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5854;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90093221 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90093259 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9872;ERATE=0.0003;THETA=0.0019;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90093790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90093817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0129;AVGPOST=0.9979;RSQ=0.9415;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90093928 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4839;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90093941 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90094139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.755;LDAF=0.0072;AVGPOST=0.9983;RSQ=0.9061;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90094219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5912;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90094228 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6183;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0005;THETA=0.0001;AC=1351;AN=2184 GT:DS:GL:BD 0.61858976 1
1 90094349 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6457;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90094359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.6181;AVGPOST=0.9980;RSQ=0.9967;ERATE=0.0007;THETA=0.0006;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 90094376 rs35519348 GC G 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90094423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90094707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90094831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8839;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90095034 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7675;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90095074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5513;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90095146 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90095168 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90095190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9287;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90095330 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90095529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.7857;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90095555 . T TA 119 PASS INDEL;BAVGPOST=0.998;BRSQ=0.591;LDAF=0.0053;AVGPOST=0.9940;RSQ=0.5369;ERATE=0.0014;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90095597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4225;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90095661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0280;AVGPOST=0.9992;RSQ=0.9881;ERATE=0.0003;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 90095662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90095678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90095690 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6387;AVGPOST=0.9943;RSQ=0.9914;ERATE=0.0007;THETA=0.0008;AC=1395;AN=2184 GT:DS:GL:BD 0.63873625 1
1 90095723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0129;AVGPOST=0.9990;RSQ=0.9683;ERATE=0.0005;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90095783 . CAAT C 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90095940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90095947 . AT A 1951 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0098;AVGPOST=0.9993;RSQ=0.9760;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90096050 . TA T 287 PASS INDEL;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7188;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90096081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6863;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90096235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6880;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90096349 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90096386 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90096396 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9164;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90096583 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8989;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90096664 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6445;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90097088 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5158;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90097251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7851;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90097254 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6007;AVGPOST=0.9952;RSQ=0.9920;ERATE=0.0007;THETA=0.0064;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 90097270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90097316 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7600;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90097322 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8787;ERATE=0.0003;THETA=0.0034;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90097365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7723;ERATE=0.0004;THETA=0.0048;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90097643 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0068;AVGPOST=0.9993;RSQ=0.9578;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90097695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7053;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90098011 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6573;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90098096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0122;AVGPOST=0.9989;RSQ=0.9656;ERATE=0.0003;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90098289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9990;RSQ=0.9450;ERATE=0.0004;THETA=0.0020;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90098318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0201;AVGPOST=0.9980;RSQ=0.9558;ERATE=0.0007;THETA=0.0036;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 90098715 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.894;LDAF=0.6383;AVGPOST=0.9666;RSQ=0.9414;ERATE=0.0020;THETA=0.0005;AC=1407;AN=2184 GT:DS:GL:BD 0.64423078 1
1 90098781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.511;LDAF=0.0264;AVGPOST=0.9809;RSQ=0.6960;ERATE=0.0017;THETA=0.0024;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 90098995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.962;LDAF=0.0776;AVGPOST=0.9949;RSQ=0.9750;ERATE=0.0009;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 90099034 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0132;AVGPOST=0.9983;RSQ=0.9419;ERATE=0.0005;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90099036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.956;LDAF=0.5642;AVGPOST=0.9463;RSQ=0.9169;ERATE=0.0099;THETA=0.0004;AC=1241;AN=2184 GT:DS:GL:BD 0.56822342 1
1 90099191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0316;AVGPOST=0.9703;RSQ=0.6325;ERATE=0.0025;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 90099193 . T TG 576 PASS INDEL;BAVGPOST=0.981;BRSQ=0.809;LDAF=0.0532;AVGPOST=0.9650;RSQ=0.7539;ERATE=0.0024;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 90099195 . G GA 538 PASS INDEL;BAVGPOST=0.985;BRSQ=0.725;LDAF=0.0362;AVGPOST=0.9805;RSQ=0.7762;ERATE=0.0014;THETA=0.0008;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 90099214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0687;AVGPOST=0.9921;RSQ=0.9590;ERATE=0.0007;THETA=0.0009;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 90099305 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3976;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90099700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9092;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90099704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8598;ERATE=0.0005;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90099713 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.3898;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90099853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90099890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0117;AVGPOST=0.9978;RSQ=0.9251;ERATE=0.0004;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90099936 . CT C 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90099948 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9438;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90099973 . T TA 2561 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0402;AVGPOST=0.9985;RSQ=0.9857;ERATE=0.0004;THETA=0.0007;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 90099974 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0388;AVGPOST=0.9996;RSQ=0.9958;ERATE=0.0003;THETA=0.0010;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 90099976 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0392;AVGPOST=0.9991;RSQ=0.9923;ERATE=0.0003;THETA=0.0014;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 90100115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0389;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0009;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 90100158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90100169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0390;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 90100179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90100319 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90100420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.919;LDAF=0.0428;AVGPOST=0.9949;RSQ=0.9523;ERATE=0.0005;THETA=0.0012;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 90100873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0272;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0004;THETA=0.0009;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 90100925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6108;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0005;THETA=0.0006;AC=1335;AN=2184 GT:DS:GL:BD 0.61126375 1
1 90101243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9973;RSQ=0.9357;ERATE=0.0004;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90101326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6499;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0005;THETA=0.0005;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 90101407 . T TG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0027;AVGPOST=0.9967;RSQ=0.5203;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90101477 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0156;AVGPOST=0.9997;RSQ=0.9920;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90101645 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90101832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6116;AVGPOST=0.9975;RSQ=0.9957;ERATE=0.0006;THETA=0.0008;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90101916 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90101942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8864;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90101975 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0271;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 90101991 . CAT C 126 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5636;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90102173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.6093;AVGPOST=0.9963;RSQ=0.9939;ERATE=0.0004;THETA=0.0005;AC=1333;AN=2184 GT:DS:GL:BD 0.61034799 1
1 90102185 rs67153129 TCACCCTTGACCAAGCCTC T 83559 PASS INDEL;BAVGPOST=0.969;BRSQ=0.943;LDAF=0.5838;AVGPOST=0.9462;RSQ=0.9179;ERATE=0.0073;THETA=0.0011;AC=1300;AN=2184 GT:DS:GL:BD 0.59523809 1
1 90102267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9618;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90102298 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0049;AVGPOST=0.9975;RSQ=0.7971;ERATE=0.0009;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90102364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7557;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90102396 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5448;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90102397 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0298;AVGPOST=0.9978;RSQ=0.9679;ERATE=0.0006;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 90102456 . A AT 1458 PASS INDEL;BAVGPOST=0.732;BRSQ=0.501;LDAF=0.3120;AVGPOST=0.7631;RSQ=0.5910;ERATE=0.0283;THETA=0.0007;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 90102462 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.976;LDAF=0.5777;AVGPOST=0.9768;RSQ=0.9648;ERATE=0.0041;THETA=0.0007;AC=1265;AN=2184 GT:DS:GL:BD 0.57921243 1
1 90102613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90102618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.904;LDAF=0.0265;AVGPOST=0.9960;RSQ=0.9391;ERATE=0.0004;THETA=0.0027;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 90102619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6110;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=1335;AN=2184 GT:DS:GL:BD 0.61126375 1
1 90102665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6106;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0005;THETA=0.0003;AC=1335;AN=2184 GT:DS:GL:BD 0.61126375 1
1 90102687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7234;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90102720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90102788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90102870 rs10671453 A ACCT 99814 PASS INDEL;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6084;AVGPOST=0.9938;RSQ=0.9899;ERATE=0.0008;THETA=0.0004;AC=1332;AN=2184 GT:DS:GL:BD 0.60989010 1
1 90102888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.9192;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90103080 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6108;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0005;THETA=0.0005;AC=1334;AN=2184 GT:DS:GL:BD 0.61080587 1
1 90103194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6500;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0005;THETA=0.0007;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 90103321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6732;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90103336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6114;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0006;THETA=0.0008;AC=1335;AN=2184 GT:DS:GL:BD 0.61126375 1
1 90103344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90103376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90103504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0125;AVGPOST=0.9955;RSQ=0.8574;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90103510 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0170;AVGPOST=0.9976;RSQ=0.9512;ERATE=0.0005;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90103540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.723;LDAF=0.0053;AVGPOST=0.9990;RSQ=0.9322;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90103697 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7052;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90103745 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.783;LDAF=0.0099;AVGPOST=0.9966;RSQ=0.8547;ERATE=0.0005;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90104043 . C CG 18659 PASS INDEL;BAVGPOST=0.965;BRSQ=0.936;LDAF=0.5899;AVGPOST=0.9507;RSQ=0.9231;ERATE=0.0106;THETA=0.0004;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 90104044 rs34545030 G GC 59224 PASS INDEL;BAVGPOST=0.979;BRSQ=0.963;LDAF=0.6107;AVGPOST=0.9962;RSQ=0.9934;ERATE=0.0006;THETA=0.0007;AC=1334;AN=2184 GT:DS:GL:BD 0.61080587 1
1 90104181 rs34962234 C CA 52987 PASS INDEL;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.6131;AVGPOST=0.9933;RSQ=0.9889;ERATE=0.0009;THETA=0.0004;AC=1341;AN=2184 GT:DS:GL:BD 0.61401099 1
1 90104218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.9878;AVGPOST=0.9958;RSQ=0.8575;ERATE=0.0008;THETA=0.0008;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 90104449 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0094;AVGPOST=0.9974;RSQ=0.8989;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90104454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0092;AVGPOST=0.9973;RSQ=0.8705;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90104476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7069;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90104589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0055;AVGPOST=0.9944;RSQ=0.5935;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90104824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.942;LDAF=0.5464;AVGPOST=0.9779;RSQ=0.9651;ERATE=0.0021;THETA=0.0005;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 90104834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.942;LDAF=0.5891;AVGPOST=0.9822;RSQ=0.9717;ERATE=0.0012;THETA=0.0008;AC=1294;AN=2184 GT:DS:GL:BD 0.59249085 1
1 90104900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0267;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 90104902 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90104916 . G GGA 71 PASS INDEL;BAVGPOST=0.997;BRSQ=0.572;LDAF=0.0065;AVGPOST=0.9955;RSQ=0.7435;ERATE=0.0007;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90104919 . G GGA 5442 PASS INDEL;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0281;AVGPOST=0.9978;RSQ=0.9675;ERATE=0.0004;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 90105043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3871;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90105083 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0149;AVGPOST=0.9995;RSQ=0.9849;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90105257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8069;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90105448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6114;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0006;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90105456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6503;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90105457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.741;LDAF=0.0066;AVGPOST=0.9959;RSQ=0.7362;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90105575 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0269;AVGPOST=0.9989;RSQ=0.9833;ERATE=0.0004;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 90105604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3311;AVGPOST=0.9965;RSQ=0.9939;ERATE=0.0007;THETA=0.0006;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 90105688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6056;AVGPOST=0.9857;RSQ=0.9786;ERATE=0.0037;THETA=0.0004;AC=1327;AN=2184 GT:DS:GL:BD 0.60760075 1
1 90105706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9174;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90105737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.3367;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90105768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.530;LDAF=0.0101;AVGPOST=0.9954;RSQ=0.8192;ERATE=0.0006;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90105838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6111;AVGPOST=0.9971;RSQ=0.9948;ERATE=0.0006;THETA=0.0003;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90105955 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90106047 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.515;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90106274 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6565;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90106359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5946;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90106512 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4947;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90106615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7501;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90106645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6109;AVGPOST=0.9961;RSQ=0.9939;ERATE=0.0008;THETA=0.0010;AC=1335;AN=2184 GT:DS:GL:BD 0.61126375 1
1 90106697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6118;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90106745 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6113;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90106764 . AC A 1498 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0136;AVGPOST=0.9992;RSQ=0.9785;ERATE=0.0004;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90106791 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6109;AVGPOST=0.9961;RSQ=0.9934;ERATE=0.0007;THETA=0.0005;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90106802 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90106853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8824;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90107098 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.997;LDAF=0.6505;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0006;AC=1421;AN=2184 GT:DS:GL:BD 0.65064102 1
1 90107212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6530;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90107303 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90107414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.5754;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90107417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0270;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0004;THETA=0.0012;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 90107463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90107501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6493;AVGPOST=0.9953;RSQ=0.9917;ERATE=0.0014;THETA=0.0005;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 90107518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0158;AVGPOST=0.9995;RSQ=0.9852;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90107526 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90107548 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0280;AVGPOST=0.9979;RSQ=0.9717;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 90107590 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4754;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90107597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90107733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8663;ERATE=0.0009;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90107799 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6112;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90107863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9650;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90107904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0082;AVGPOST=0.9979;RSQ=0.9061;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90107941 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0062;AVGPOST=0.9993;RSQ=0.9471;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90108044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.730;LDAF=0.9739;AVGPOST=0.9750;RSQ=0.6203;ERATE=0.0031;THETA=0.0006;AC=2141;AN=2184 GT:DS:GL:BD 0.98031133 1
1 90108175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3938;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90108292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6109;AVGPOST=0.9966;RSQ=0.9937;ERATE=0.0008;THETA=0.0004;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90108502 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.9888;AVGPOST=0.9947;RSQ=0.8115;ERATE=0.0006;THETA=0.0004;AC=2162;AN=2184 GT:DS:GL:BD 0.98992676 1
1 90108721 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6125;AVGPOST=0.9978;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=1338;AN=2184 GT:DS:GL:BD 0.61263734 1
1 90108730 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.8316;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90108733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0165;AVGPOST=0.9990;RSQ=0.9759;ERATE=0.0004;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90108743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6129;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0006;THETA=0.0003;AC=1338;AN=2184 GT:DS:GL:BD 0.61263734 1
1 90108831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90108894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7215;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90109023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90109308 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0108;AVGPOST=0.9985;RSQ=0.9466;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90109315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90109471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0045;AVGPOST=0.9987;RSQ=0.8671;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90109499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.6503;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=1421;AN=2184 GT:DS:GL:BD 0.65064102 1
1 90109758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5602;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90109815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6126;AVGPOST=0.9928;RSQ=0.9889;ERATE=0.0010;THETA=0.0006;AC=1338;AN=2184 GT:DS:GL:BD 0.61263734 1
1 90109854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6111;AVGPOST=0.9980;RSQ=0.9962;ERATE=0.0006;THETA=0.0003;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90109888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6444;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90109915 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9813;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90109956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6642;AVGPOST=0.9952;RSQ=0.9925;ERATE=0.0007;THETA=0.0003;AC=1452;AN=2184 GT:DS:GL:BD 0.66483516 1
1 90110010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6504;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0009;AC=1421;AN=2184 GT:DS:GL:BD 0.65064102 1
1 90110039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8976;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90110079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90110144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9574;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90110160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90110260 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6174;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90110343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9997;RSQ=0.9924;ERATE=0.0004;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 90110392 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5749;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90110457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90110481 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0270;AVGPOST=0.9997;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 90110547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6468;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90110596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9989;RSQ=0.9674;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90110862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6110;AVGPOST=0.9972;RSQ=0.9949;ERATE=0.0006;THETA=0.0004;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90110924 . C CA 6 PASS INDEL;BAVGPOST=0.998;BRSQ=0.643;LDAF=0.0035;AVGPOST=0.9974;RSQ=0.7371;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90111029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9592;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90111092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90111275 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8482;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90111298 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0130;AVGPOST=0.9982;RSQ=0.9467;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90111349 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90111488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8043;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90111583 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6105;AVGPOST=0.9964;RSQ=0.9948;ERATE=0.0005;THETA=0.0005;AC=1333;AN=2184 GT:DS:GL:BD 0.61034799 1
1 90111683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0271;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0003;THETA=0.0008;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 90111751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5594;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90111851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6116;AVGPOST=0.9954;RSQ=0.9919;ERATE=0.0010;THETA=0.0004;AC=1338;AN=2184 GT:DS:GL:BD 0.61263734 1
1 90111977 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4558;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90112013 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6472;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90112181 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.362;LDAF=0.0071;AVGPOST=0.9899;RSQ=0.4709;ERATE=0.0024;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90112242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.969;LDAF=0.0757;AVGPOST=0.9934;RSQ=0.9645;ERATE=0.0004;THETA=0.0005;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 90112431 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6114;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90112463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6472;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90112484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7535;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90112564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0273;AVGPOST=0.9993;RSQ=0.9888;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 90112579 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5840;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0006;THETA=0.0006;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 90112631 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7784;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90112706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8400;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90112780 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0164;AVGPOST=0.9992;RSQ=0.9834;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90112827 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.6102;AVGPOST=0.9971;RSQ=0.9951;ERATE=0.0005;THETA=0.0005;AC=1334;AN=2184 GT:DS:GL:BD 0.61080587 1
1 90112839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0148;AVGPOST=0.9994;RSQ=0.9828;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90112840 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.6094;AVGPOST=0.9953;RSQ=0.9931;ERATE=0.0005;THETA=0.0005;AC=1334;AN=2184 GT:DS:GL:BD 0.61080587 1
1 90112866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0135;AVGPOST=0.9994;RSQ=0.9800;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90112903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9592;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90113091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7665;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90113258 . TC T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5192;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90113324 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5160;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90113447 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6111;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0005;THETA=0.0008;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90113532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0170;AVGPOST=0.9977;RSQ=0.9601;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 90113533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.760;LDAF=0.0160;AVGPOST=0.9941;RSQ=0.8584;ERATE=0.0004;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90113623 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6189;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90113702 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6117;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0006;THETA=0.0010;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90113745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6114;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90113824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6122;AVGPOST=0.9946;RSQ=0.9909;ERATE=0.0011;THETA=0.0004;AC=1335;AN=2184 GT:DS:GL:BD 0.61126375 1
1 90113859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5453;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90113928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4608;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90113937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9191;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90113949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7055;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90114006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8284;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90114010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0273;AVGPOST=0.9993;RSQ=0.9880;ERATE=0.0004;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 90114021 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8242;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90114071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6139;AVGPOST=0.9957;RSQ=0.9935;ERATE=0.0004;THETA=0.0004;AC=1340;AN=2184 GT:DS:GL:BD 0.61355311 1
1 90114176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.902;LDAF=0.0163;AVGPOST=0.9977;RSQ=0.9412;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90114283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7913;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90114378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7634;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90114713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7132;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90114781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5931;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90115019 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90115066 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0117;AVGPOST=0.9981;RSQ=0.9402;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90115079 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.569;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.6242;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90115080 . A AT 80 PASS INDEL;BAVGPOST=0.996;BRSQ=0.638;LDAF=0.0066;AVGPOST=0.9928;RSQ=0.5763;ERATE=0.0012;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90115088 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.5403;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90115261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0281;AVGPOST=0.9993;RSQ=0.9881;ERATE=0.0003;THETA=0.0008;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 90115269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6113;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90115304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0129;AVGPOST=0.9984;RSQ=0.9540;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90115422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.6737;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90115614 . TGTAA T 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0026;AVGPOST=0.9957;RSQ=0.3813;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90115781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0160;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90115810 . A ACT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4229;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90115833 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6846;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90115873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8482;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90116038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0050;AVGPOST=0.9963;RSQ=0.7240;ERATE=0.0007;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90116068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.932;LDAF=0.5445;AVGPOST=0.9544;RSQ=0.9312;ERATE=0.0107;THETA=0.0006;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 90116097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0027;AVGPOST=0.9976;RSQ=0.6338;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90116312 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6269;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90116464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8101;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90116587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6116;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0004;THETA=0.0004;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90116640 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90116752 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90116826 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90116834 . A AG 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5490;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90116854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6112;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0005;THETA=0.0005;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90116984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.710;LDAF=0.0090;AVGPOST=0.9952;RSQ=0.7871;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90116996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.928;LDAF=0.3158;AVGPOST=0.9707;RSQ=0.9505;ERATE=0.0054;THETA=0.0003;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 90117049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4485;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90117054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0131;AVGPOST=0.9984;RSQ=0.9445;ERATE=0.0005;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90117082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.947;LDAF=0.0254;AVGPOST=0.9979;RSQ=0.9656;ERATE=0.0005;THETA=0.0008;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 90117126 rs78744106 C CA 968 PASS INDEL;BAVGPOST=0.487;BRSQ=0.147;LDAF=0.4699;AVGPOST=0.6210;RSQ=0.3403;ERATE=0.0334;THETA=0.0005;AC=943;AN=2184 GT:DS:GL:BD 0.43177655 0
1 90117154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0258;AVGPOST=0.9994;RSQ=0.9888;ERATE=0.0003;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 90117315 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6136;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90117493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0218;AVGPOST=0.9963;RSQ=0.9285;ERATE=0.0005;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 90117586 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5675;AVGPOST=0.9950;RSQ=0.9920;ERATE=0.0011;THETA=0.0006;AC=1241;AN=2184 GT:DS:GL:BD 0.56822342 1
1 90117620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0149;AVGPOST=0.9995;RSQ=0.9872;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90117660 . TAAAAG T 56 PASS INDEL;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0039;AVGPOST=0.9956;RSQ=0.6002;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90117833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5968;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0007;THETA=0.0005;AC=1303;AN=2184 GT:DS:GL:BD 0.59661174 1
1 90117934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6102;AVGPOST=0.9977;RSQ=0.9958;ERATE=0.0008;THETA=0.0004;AC=1334;AN=2184 GT:DS:GL:BD 0.61080587 1
1 90118187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9932;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90118258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.762;LDAF=0.0082;AVGPOST=0.9947;RSQ=0.7593;ERATE=0.0005;THETA=0.0021;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90118320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6060;AVGPOST=0.9952;RSQ=0.9920;ERATE=0.0015;THETA=0.0040;AC=1323;AN=2184 GT:DS:GL:BD 0.60576922 1
1 90118371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7899;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90118710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.952;LDAF=0.0695;AVGPOST=0.9957;RSQ=0.9731;ERATE=0.0003;THETA=0.0004;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 90118740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9996;RSQ=0.9901;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90118772 . GC G 248 PASS INDEL;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8241;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90118913 . G GT 2423 PASS INDEL;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0157;AVGPOST=0.9996;RSQ=0.9884;ERATE=0.0004;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90118963 . GTCATGTA G 4731 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0142;AVGPOST=0.9996;RSQ=0.9864;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90119005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90119077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90119191 . GAA G 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5547;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90119290 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3287;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0005;THETA=0.0004;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 90119304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6097;AVGPOST=0.9963;RSQ=0.9944;ERATE=0.0007;THETA=0.0007;AC=1330;AN=2184 GT:DS:GL:BD 0.60897434 1
1 90119379 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90119485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90119514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0128;AVGPOST=0.9991;RSQ=0.9763;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90119554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8567;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90119741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90119804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6111;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=1335;AN=2184 GT:DS:GL:BD 0.61126375 1
1 90119910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7306;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90119928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0134;AVGPOST=0.9998;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90119953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0045;AVGPOST=0.9980;RSQ=0.8304;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90119985 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8656;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90119987 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5911;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90119992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.5697;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0007;THETA=0.0003;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 90119999 . ACTTC A 920 PASS INDEL;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0040;AVGPOST=0.9969;RSQ=0.6875;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90120004 . CAGTTGGAAATGTCA C 540 PASS INDEL;BAVGPOST=0.998;BRSQ=0.694;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.7317;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90120173 . AAGTT A 1852 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0104;AVGPOST=0.9988;RSQ=0.9507;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90120327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9628;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90120408 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90120538 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5652;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90120817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9915;AVGPOST=0.9985;RSQ=0.9271;ERATE=0.0003;THETA=0.0004;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 90120822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6084;AVGPOST=0.9836;RSQ=0.9738;ERATE=0.0038;THETA=0.0005;AC=1332;AN=2184 GT:DS:GL:BD 0.60989010 1
1 90120823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90120882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90120980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90120993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90121032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6501;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0004;THETA=0.0006;AC=1422;AN=2184 GT:DS:GL:BD 0.65109891 1
1 90121042 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90121112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5908;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90121144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.854;LDAF=0.0106;AVGPOST=0.9968;RSQ=0.8855;ERATE=0.0004;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90121245 . GA G 375 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8991;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90121257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9508;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90121346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90121414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9996;RSQ=0.9883;ERATE=0.0003;THETA=0.0012;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90121437 . T TA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90121459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90121528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6626;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90121620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0133;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90121631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90121654 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8559;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90121668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5780;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90121672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90121677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90121691 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90121751 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6110;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=1335;AN=2184 GT:DS:GL:BD 0.61126375 1
1 90121757 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0244;AVGPOST=0.9996;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 90121805 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90121885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5928;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90121907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8905;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90121931 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90122100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90122278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90122527 . TTAAA T 1961 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0159;AVGPOST=0.9980;RSQ=0.9551;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90122585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7300;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90122724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9073;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90122857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7478;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90122931 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6502;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=1421;AN=2184 GT:DS:GL:BD 0.65064102 1
1 90123142 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0253;AVGPOST=0.9996;RSQ=0.9927;ERATE=0.0004;THETA=0.0068;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 90123160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90123172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5069;ERATE=0.0004;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90123173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0255;AVGPOST=0.9992;RSQ=0.9863;ERATE=0.0003;THETA=0.0019;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 90123204 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0147;AVGPOST=0.9971;RSQ=0.9184;ERATE=0.0004;THETA=0.0020;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90123257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.5800;ERATE=0.0006;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90123471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0105;AVGPOST=0.9982;RSQ=0.9299;ERATE=0.0003;THETA=0.0011;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90123517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7329;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90123632 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90123717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.529;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90123727 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7743;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90123782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7234;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90123896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90124073 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5149;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90124377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7976;ERATE=0.0005;THETA=0.0079;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90124421 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7336;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90124494 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.654;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7258;ERATE=0.0004;THETA=0.0047;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90124613 rs61570058 T TTG 10737 PASS INDEL;BAVGPOST=0.920;BRSQ=0.814;LDAF=0.2992;AVGPOST=0.8750;RSQ=0.7722;ERATE=0.0183;THETA=0.0008;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 90124662 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.955;LDAF=0.0502;AVGPOST=0.9889;RSQ=0.9243;ERATE=0.0014;THETA=0.0125;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 90124803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0045;AVGPOST=0.9960;RSQ=0.7146;ERATE=0.0003;THETA=0.0018;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90124860 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0069;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90124932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.8297;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90125062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90125075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.669;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9587;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90125084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6899;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90125124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5103;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90125137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7651;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90125157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9402;ERATE=0.0003;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90125185 . GTAAT G 7742 PASS INDEL;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0351;AVGPOST=0.9968;RSQ=0.9655;ERATE=0.0007;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 90125265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5904;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90125269 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90125355 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0697;AVGPOST=0.9951;RSQ=0.9739;ERATE=0.0004;THETA=0.0004;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 90125408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90125449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5691;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90125517 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=0.9995;RSQ=0.9706;ERATE=0.0003;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90125566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2986;AVGPOST=0.9959;RSQ=0.9925;ERATE=0.0006;THETA=0.0005;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 90125657 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3030;AVGPOST=0.9938;RSQ=0.9893;ERATE=0.0008;THETA=0.0007;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 90125675 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90125678 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9138;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90125728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90125841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5413;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90125890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0347;AVGPOST=0.9990;RSQ=0.9896;ERATE=0.0004;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 90125920 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8760;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90125934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3487;AVGPOST=0.9973;RSQ=0.9946;ERATE=0.0006;THETA=0.0002;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 90126158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90126207 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90126388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90126393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0373;AVGPOST=0.9992;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 90126513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0011;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90126542 . C CT 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6213;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90126559 . TC T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90126582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90126583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9697;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90126765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9993;RSQ=0.9684;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90126787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9715;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90126813 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3529;AVGPOST=0.9988;RSQ=0.9983;ERATE=0.0003;THETA=0.0006;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 90126860 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0051;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90127035 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90127075 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2801;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0026;THETA=0.0004;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 90127280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0109;AVGPOST=0.9992;RSQ=0.9754;ERATE=0.0005;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90127437 . CAG C 5599 PASS INDEL;BAVGPOST=0.962;BRSQ=0.912;LDAF=0.2913;AVGPOST=0.9656;RSQ=0.9351;ERATE=0.0010;THETA=0.0010;AC=648;AN=2184 GT:DS:GL:BD 0.29670331 0
1 90127438 rs112833922 AGAG A 41007 PASS INDEL;BAVGPOST=0.989;BRSQ=0.976;LDAF=0.3208;AVGPOST=0.9906;RSQ=0.9834;ERATE=0.0004;THETA=0.0003;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 90127442 . GAGT G 13130 PASS INDEL;BAVGPOST=0.978;BRSQ=0.952;LDAF=0.3141;AVGPOST=0.9801;RSQ=0.9632;ERATE=0.0020;THETA=0.0004;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 90127500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0064;AVGPOST=0.9983;RSQ=0.8755;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90127548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9945;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90127592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90127619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90127704 . G GATA 268 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6586;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90127713 . G GA 1611 PASS INDEL;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0162;AVGPOST=0.9949;RSQ=0.9006;ERATE=0.0009;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90127750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90127787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6743;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90127877 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90127893 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8837;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90128179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90128229 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9976;RSQ=0.9287;ERATE=0.0005;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90128231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90128279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0111;AVGPOST=0.9989;RSQ=0.9579;ERATE=0.0003;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90128300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90128385 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8187;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90128389 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.966;LDAF=0.0930;AVGPOST=0.9905;RSQ=0.9599;ERATE=0.0004;THETA=0.0004;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 90128414 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9129;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90128492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4517;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90128501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.9902;AVGPOST=0.9952;RSQ=0.7987;ERATE=0.0012;THETA=0.0005;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 90128552 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6946;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90128705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0112;AVGPOST=0.9993;RSQ=0.9769;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90128741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4078;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90128777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7670;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90128852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.892;LDAF=0.0271;AVGPOST=0.9940;RSQ=0.9127;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 90128858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0441;AVGPOST=0.9982;RSQ=0.9847;ERATE=0.0004;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 90128985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0038;AVGPOST=0.9975;RSQ=0.7306;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90129061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.880;LDAF=0.3476;AVGPOST=0.9830;RSQ=0.9689;ERATE=0.0007;THETA=0.0004;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 90129114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0217;AVGPOST=0.9983;RSQ=0.9717;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90129164 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0110;AVGPOST=0.9992;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90129276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0122;AVGPOST=0.9992;RSQ=0.9683;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90129334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0166;AVGPOST=0.9964;RSQ=0.9106;ERATE=0.0006;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90129432 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7492;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90129482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9190;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90129483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0060;AVGPOST=0.9996;RSQ=0.9692;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90129688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3569;AVGPOST=0.9931;RSQ=0.9880;ERATE=0.0011;THETA=0.0023;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 90129756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.953;LDAF=0.3227;AVGPOST=0.9851;RSQ=0.9730;ERATE=0.0005;THETA=0.0004;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 90129794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.6171;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90129834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6633;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90129876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90129919 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0031;AVGPOST=0.9976;RSQ=0.6897;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90130001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0154;AVGPOST=0.9993;RSQ=0.9797;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90130133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.954;LDAF=0.3205;AVGPOST=0.9836;RSQ=0.9701;ERATE=0.0014;THETA=0.0010;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 90130271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.8228;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90130309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7166;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90130310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.958;LDAF=0.3267;AVGPOST=0.9883;RSQ=0.9783;ERATE=0.0004;THETA=0.0004;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 90130429 . GT G 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4883;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90130623 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8601;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90130716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8186;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90130724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.727;LDAF=0.0044;AVGPOST=0.9973;RSQ=0.7689;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90130749 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6158;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90130809 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9465;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90130873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3408;AVGPOST=0.9976;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 90131068 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9548;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90131084 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0351;AVGPOST=0.9970;RSQ=0.9727;ERATE=0.0004;THETA=0.0004;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 90131128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8368;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90131189 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0151;AVGPOST=0.9991;RSQ=0.9729;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90131258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4485;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90131311 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7165;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90131462 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9898;AVGPOST=0.9995;RSQ=0.9762;ERATE=0.0004;THETA=0.0005;AC=2162;AN=2184 GT:DS:GL:BD 0.98992676 1
1 90131473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90131549 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90131599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0081;AVGPOST=0.9974;RSQ=0.8745;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90131666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90131678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0023;AVGPOST=0.9967;RSQ=0.5262;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90131698 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8562;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90131808 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90131828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0036;AVGPOST=0.9994;RSQ=0.9351;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90131963 rs113957339 T TTAAGTA 45573 PASS INDEL;BAVGPOST=0.937;BRSQ=0.882;LDAF=0.3204;AVGPOST=0.9441;RSQ=0.9024;ERATE=0.0089;THETA=0.0006;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 90131971 . AAT A 23 PASS INDEL;BAVGPOST=0.963;BRSQ=0.273;LDAF=0.0711;AVGPOST=0.9161;RSQ=0.5149;ERATE=0.0037;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 90132035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7056;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90132069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3465;AVGPOST=0.9979;RSQ=0.9957;ERATE=0.0006;THETA=0.0003;AC=758;AN=2184 GT:DS:GL:BD 0.34706959 0
1 90132104 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90132122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90132200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90132270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5774;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0005;THETA=0.0003;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 90132312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90132394 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8428;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90132480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3582;AVGPOST=0.9977;RSQ=0.9956;ERATE=0.0007;THETA=0.0004;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 90132481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0035;AVGPOST=0.9968;RSQ=0.6363;ERATE=0.0008;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90132582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5769;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0005;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 90132599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90132747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90132800 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9739;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90132815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9846;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90133034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0365;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 90133042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90133088 . AAAAG A 164 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90133110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90133273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9996;RSQ=0.9846;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90133293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3415;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 90133382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0122;AVGPOST=0.9992;RSQ=0.9689;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90133390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9905;AVGPOST=0.9994;RSQ=0.9685;ERATE=0.0003;THETA=0.0003;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 90133430 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8715;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90133611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9257;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90133699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90133794 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5035;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90133804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0071;AVGPOST=0.9981;RSQ=0.8958;ERATE=0.0008;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90133814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90133907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7509;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90133911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90133970 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0128;AVGPOST=0.9994;RSQ=0.9812;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90134018 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.2897;AVGPOST=0.9948;RSQ=0.9906;ERATE=0.0004;THETA=0.0005;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 90134213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6599;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90134239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.7783;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90134263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9114;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90134267 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9396;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90134392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3592;AVGPOST=0.9977;RSQ=0.9956;ERATE=0.0006;THETA=0.0002;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 90134401 . CATG C 37 PASS INDEL;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6237;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90134473 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5623;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90134491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7787;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90134540 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9724;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90134577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0023;AVGPOST=0.9965;RSQ=0.4756;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90134705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.6495;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0005;THETA=0.0003;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 90134768 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8578;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90134830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8902;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90134925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.9101;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90134942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0298;AVGPOST=0.9995;RSQ=0.9934;ERATE=0.0003;THETA=0.0008;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 90134975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8813;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90135059 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.5554;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90135081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90135274 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9816;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90135433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2974;AVGPOST=0.9964;RSQ=0.9931;ERATE=0.0006;THETA=0.0005;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 90135516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90135559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90135657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90135686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7705;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90135706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7909;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90135818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9549;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90135834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5858;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90135856 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9342;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90135865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8257;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90135952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0208;AVGPOST=0.9994;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 90136166 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5617;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90136291 . CA C 939 PASS INDEL;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0130;AVGPOST=0.9983;RSQ=0.9458;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90136329 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6094;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90136330 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5431;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90136639 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5338;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90136655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8406;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90136769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9817;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90136900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5908;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90136902 . G GA 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90137036 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.696;LDAF=0.0406;AVGPOST=0.9668;RSQ=0.6926;ERATE=0.0138;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 90137087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3039;AVGPOST=0.9977;RSQ=0.9956;ERATE=0.0004;THETA=0.0002;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 90137110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90137142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0049;AVGPOST=0.9988;RSQ=0.8941;ERATE=0.0009;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90137171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90137205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90137275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6938;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90137294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90137408 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90137436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0044;AVGPOST=0.9987;RSQ=0.8772;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90137441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90137493 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9794;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90137579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90137693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5661;ERATE=0.0008;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90137834 . CAT C 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90137835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6169;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0003;THETA=0.0007;AC=1347;AN=2184 GT:DS:GL:BD 0.61675823 1
1 90137849 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90137868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9771;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90137905 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9225;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90137920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5967;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90137954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9998;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90137967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7453;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90137973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8435;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90137995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6228;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0004;THETA=0.0016;AC=1360;AN=2184 GT:DS:GL:BD 0.62271065 1
1 90138063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9908;AVGPOST=0.9997;RSQ=0.9840;ERATE=0.0003;THETA=0.0006;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 90138190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5787;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90138369 . T TTA 894 PASS INDEL;BAVGPOST=0.958;BRSQ=0.656;LDAF=0.0716;AVGPOST=0.9486;RSQ=0.7091;ERATE=0.0053;THETA=0.0005;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 90138373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.6187;AVGPOST=0.9955;RSQ=0.9927;ERATE=0.0007;THETA=0.0004;AC=1352;AN=2184 GT:DS:GL:BD 0.61904764 1
1 90138414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.8981;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90138431 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7550;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90138560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5708;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90138595 . CCTT C 458 PASS INDEL;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0057;AVGPOST=0.9976;RSQ=0.8348;ERATE=0.0008;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90138930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9880;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90138961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2814;AVGPOST=0.9950;RSQ=0.9903;ERATE=0.0005;THETA=0.0004;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 90139008 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5885;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0004;THETA=0.0010;AC=1285;AN=2184 GT:DS:GL:BD 0.58836997 1
1 90139038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4532;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90139057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.901;LDAF=0.0264;AVGPOST=0.9962;RSQ=0.9492;ERATE=0.0004;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 90139130 . C CT 57 PASS INDEL;BAVGPOST=0.993;BRSQ=0.568;LDAF=0.0168;AVGPOST=0.9804;RSQ=0.5598;ERATE=0.0031;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90139182 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8467;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90139205 . TA T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90139240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90139249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9116;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90139260 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5884;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0006;THETA=0.0002;AC=1285;AN=2184 GT:DS:GL:BD 0.58836997 1
1 90139276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90139388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90139394 . CAG C 1428 PASS INDEL;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0077;AVGPOST=0.9990;RSQ=0.9419;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90139530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9833;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90139543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0057;AVGPOST=0.9993;RSQ=0.9393;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90139623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90139668 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9862;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90139701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0186;AVGPOST=0.9994;RSQ=0.9878;ERATE=0.0004;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 90139785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8362;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90139796 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9994;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90139820 . C CAGT 1407 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8512;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90139866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90139876 . C CT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5675;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90139883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90140034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8801;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90140186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.810;LDAF=0.0072;AVGPOST=0.9988;RSQ=0.9340;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90140266 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8468;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90140323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0370;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 90140425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6060;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90140517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5897;AVGPOST=0.9970;RSQ=0.9946;ERATE=0.0006;THETA=0.0002;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 90140532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90140638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7878;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90140693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0370;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 90140751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6093;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90141013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8661;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90141060 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7596;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90141098 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7398;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90141142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90141147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90141273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90141298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90141413 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9987;RSQ=0.9415;ERATE=0.0003;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90141586 . ATGTACT A 366 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0040;AVGPOST=0.9976;RSQ=0.7358;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90141601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0075;AVGPOST=0.9986;RSQ=0.9458;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90141969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90142036 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8038;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90142126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6088;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90142260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0876;AVGPOST=0.9933;RSQ=0.9677;ERATE=0.0003;THETA=0.0004;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 90142299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9302;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90142365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7351;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90142393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0377;AVGPOST=0.9987;RSQ=0.9895;ERATE=0.0003;THETA=0.0002;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 90142416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6524;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90142419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6947;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90142441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5004;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90142472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5889;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0005;THETA=0.0003;AC=1285;AN=2184 GT:DS:GL:BD 0.58836997 1
1 90142622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7044;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90142688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5885;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0010;THETA=0.0005;AC=1285;AN=2184 GT:DS:GL:BD 0.58836997 1
1 90142774 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7703;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90142818 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90142847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0100;AVGPOST=0.9996;RSQ=0.9824;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90142870 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0341;AVGPOST=0.9994;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 90142982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0092;AVGPOST=0.9986;RSQ=0.9352;ERATE=0.0006;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90143165 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8941;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90143228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5878;AVGPOST=0.9952;RSQ=0.9922;ERATE=0.0011;THETA=0.0004;AC=1282;AN=2184 GT:DS:GL:BD 0.58699632 1
1 90143482 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.9895;AVGPOST=0.9975;RSQ=0.8911;ERATE=0.0006;THETA=0.0003;AC=2163;AN=2184 GT:DS:GL:BD 0.99038464 1
1 90143520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3058;AVGPOST=0.9911;RSQ=0.9841;ERATE=0.0022;THETA=0.0004;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 90143920 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.736;LDAF=0.0039;AVGPOST=0.9967;RSQ=0.6926;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90143962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8095;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90143988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0121;AVGPOST=0.9991;RSQ=0.9683;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90143995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4577;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90144012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3184;AVGPOST=0.9976;RSQ=0.9949;ERATE=0.0007;THETA=0.0002;AC=695;AN=2184 GT:DS:GL:BD 0.31822345 0
1 90144089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0391;AVGPOST=0.9956;RSQ=0.9548;ERATE=0.0011;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 90144110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5886;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0004;THETA=0.0005;AC=1285;AN=2184 GT:DS:GL:BD 0.58836997 1
1 90144191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0127;AVGPOST=0.9964;RSQ=0.8807;ERATE=0.0005;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90144194 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0084;AVGPOST=0.9981;RSQ=0.9136;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90144195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0082;AVGPOST=0.9983;RSQ=0.9252;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90144239 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90144275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.976;LDAF=0.5956;AVGPOST=0.9840;RSQ=0.9762;ERATE=0.0033;THETA=0.0004;AC=1295;AN=2184 GT:DS:GL:BD 0.59294873 1
1 90144319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8531;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90144453 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7752;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90144573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7410;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90144606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90144691 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3897;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=851;AN=2184 GT:DS:GL:BD 0.38965201 0
1 90144823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9330;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90144838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4062;AVGPOST=0.9974;RSQ=0.9960;ERATE=0.0005;THETA=0.0004;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 90144969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.623;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6265;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90145038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7055;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90145077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6234;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90145113 . CAA C 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6283;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90145252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.952;LDAF=0.0580;AVGPOST=0.9952;RSQ=0.9663;ERATE=0.0004;THETA=0.0006;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 90145331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.1318;AVGPOST=0.9944;RSQ=0.9818;ERATE=0.0003;THETA=0.0009;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 90145333 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.797;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.8963;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90145489 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0150;AVGPOST=0.9987;RSQ=0.9630;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90145563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90145605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2783;AVGPOST=0.9944;RSQ=0.9887;ERATE=0.0005;THETA=0.0048;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 90145672 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0051;AVGPOST=0.9975;RSQ=0.7984;ERATE=0.0006;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90145675 . CA C 526 PASS INDEL;BAVGPOST=0.994;BRSQ=0.668;LDAF=0.0096;AVGPOST=0.9953;RSQ=0.8206;ERATE=0.0004;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90145688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.402;LDAF=0.9664;AVGPOST=0.9628;RSQ=0.5722;ERATE=0.0030;THETA=0.0004;AC=2133;AN=2184 GT:DS:GL:BD 0.97664833 1
1 90145723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0033;AVGPOST=0.9970;RSQ=0.6127;ERATE=0.0006;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90145811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7345;ERATE=0.0004;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90145975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90145992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90146000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8571;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90146006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6738;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90146038 . CTGGT C 243 PASS INDEL;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7916;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90146060 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90146194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0045;AVGPOST=0.9978;RSQ=0.8085;ERATE=0.0004;THETA=0.0018;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90146239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9383;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90146240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9251;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90146301 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0062;AVGPOST=0.9989;RSQ=0.9088;ERATE=0.0003;THETA=0.0074;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90146324 . TG T 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5595;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90146546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.9912;AVGPOST=0.9985;RSQ=0.9274;ERATE=0.0004;THETA=0.0042;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 90146591 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90146621 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0058;AVGPOST=0.9991;RSQ=0.9387;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90146731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7511;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90146759 rs72422787 AATGAC A 8927 PASS INDEL;BAVGPOST=0.982;BRSQ=0.857;LDAF=0.0545;AVGPOST=0.9834;RSQ=0.8879;ERATE=0.0005;THETA=0.0008;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 90146789 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6307;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90146896 . G GT 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6559;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90146981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0394;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0007;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 90147027 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9730;AVGPOST=0.9993;RSQ=0.9891;ERATE=0.0003;THETA=0.0009;AC=2125;AN=2184 GT:DS:GL:BD 0.97298533 1
1 90147040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7354;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90147218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8622;ERATE=0.0004;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90147365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90147424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5532;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90147448 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.9729;AVGPOST=0.9995;RSQ=0.9908;ERATE=0.0003;THETA=0.0007;AC=2125;AN=2184 GT:DS:GL:BD 0.97298533 1
1 90147453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9910;AVGPOST=0.9983;RSQ=0.9269;ERATE=0.0003;THETA=0.0007;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 90147464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0260;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0003;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 90147465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7490;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90147524 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0046;AVGPOST=0.9962;RSQ=0.6512;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90147580 . CA C 181 PASS INDEL;BAVGPOST=0.994;BRSQ=0.697;LDAF=0.0127;AVGPOST=0.9935;RSQ=0.8125;ERATE=0.0008;THETA=0.0043;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90147618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.577;LDAF=0.0034;AVGPOST=0.9950;RSQ=0.4442;ERATE=0.0008;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90147641 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.600;LDAF=0.0092;AVGPOST=0.9911;RSQ=0.6603;ERATE=0.0006;THETA=0.0018;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90147668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.540;LDAF=0.0026;AVGPOST=0.9963;RSQ=0.3485;ERATE=0.0008;THETA=0.0049;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90147722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6242;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90147735 . C CA 444 PASS INDEL;BAVGPOST=0.994;BRSQ=0.776;LDAF=0.0085;AVGPOST=0.9954;RSQ=0.7658;ERATE=0.0009;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90147744 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9977;RSQ=0.9287;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90147763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8043;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90148055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90148069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90148097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.2827;ERATE=0.0004;THETA=0.0025;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90148136 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90148226 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9186;ERATE=0.0003;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90148281 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0081;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90148295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90148396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9764;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90148413 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0390;AVGPOST=0.9987;RSQ=0.9884;ERATE=0.0003;THETA=0.0009;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 90148638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9392;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90148705 . T TAATG 404 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8102;ERATE=0.0003;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90148740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0122;AVGPOST=0.9990;RSQ=0.9633;ERATE=0.0004;THETA=0.0057;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90148802 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4488;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90148807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7938;ERATE=0.0004;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90148864 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0058;AVGPOST=0.9990;RSQ=0.9359;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90148866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90148979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.9720;AVGPOST=0.9957;RSQ=0.9440;ERATE=0.0008;THETA=0.0034;AC=2124;AN=2184 GT:DS:GL:BD 0.97252744 1
1 90148985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4605;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90149019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6217;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90149386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3888;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90149484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90149603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.7999;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90149861 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0077;AVGPOST=0.9988;RSQ=0.9253;ERATE=0.0004;THETA=0.0033;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90149937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9996;RSQ=0.9804;ERATE=0.0003;THETA=0.0027;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90149982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0390;AVGPOST=0.9988;RSQ=0.9878;ERATE=0.0003;THETA=0.0036;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 90150129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90150139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9549;ERATE=0.0003;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90150183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0088;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90150314 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90150327 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90150485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5951;ERATE=0.0004;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90150510 . CTG C 209 PASS INDEL;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.7791;ERATE=0.0006;THETA=0.0044;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90150580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6837;ERATE=0.0004;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90150584 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90150593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9995;RSQ=0.9787;ERATE=0.0003;THETA=0.0073;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90150706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0164;AVGPOST=0.9948;RSQ=0.8622;ERATE=0.0005;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90150966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4769;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90150970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.885;LDAF=0.0144;AVGPOST=0.9975;RSQ=0.9353;ERATE=0.0006;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90150972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5205;ERATE=0.0003;THETA=0.0109;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90151252 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.637;LDAF=0.0354;AVGPOST=0.9686;RSQ=0.6508;ERATE=0.0096;THETA=0.0008;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 90151326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4461;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90151382 rs66508616 CAG C 59629 PASS INDEL;BAVGPOST=0.963;BRSQ=0.942;LDAF=0.5175;AVGPOST=0.9614;RSQ=0.9490;ERATE=0.0005;THETA=0.0009;AC=1124;AN=2184 GT:DS:GL:BD 0.51465201 1
1 90151385 rs60383275 AG A 19850 PASS INDEL;BAVGPOST=0.954;BRSQ=0.929;LDAF=0.5144;AVGPOST=0.9576;RSQ=0.9433;ERATE=0.0010;THETA=0.0007;AC=1121;AN=2184 GT:DS:GL:BD 0.51327837 1
1 90151574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90151622 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9691;ERATE=0.0004;THETA=0.0023;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90151700 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90151824 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9428;ERATE=0.0003;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90152016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0055;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90152041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0054;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90152116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90152146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0661;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0009;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 90152149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90152385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90152634 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0158;AVGPOST=0.9987;RSQ=0.9639;ERATE=0.0004;THETA=0.0021;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90152782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0104;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90152936 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90152981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90153145 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90153285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1294;AVGPOST=0.9953;RSQ=0.9841;ERATE=0.0004;THETA=0.0011;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 90153348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90153387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90153632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90153722 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0127;AVGPOST=0.9989;RSQ=0.9657;ERATE=0.0003;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90153749 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0464;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0007;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 90153793 . T TA 5455 PASS INDEL;BAVGPOST=0.996;BRSQ=0.962;LDAF=0.0414;AVGPOST=0.9983;RSQ=0.9832;ERATE=0.0007;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 90153850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7744;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90153950 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0073;AVGPOST=0.9987;RSQ=0.9364;ERATE=0.0003;THETA=0.0023;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90153973 . GT G 3181 PASS INDEL;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0156;AVGPOST=0.9974;RSQ=0.9428;ERATE=0.0004;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90153980 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0021;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90154052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9802;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90154063 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0035;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90154070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8495;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90154278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90154366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90154470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90154471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.9040;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90154481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.9958;AVGPOST=0.9996;RSQ=0.9540;ERATE=0.0003;THETA=0.0039;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 90154488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90154574 . T TTTCC 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6908;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90154608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90154611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90154630 . GAAGATT G 180 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7390;ERATE=0.0004;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90154689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90154694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90154715 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90154907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0140;AVGPOST=0.9991;RSQ=0.9740;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90155000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90155015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0149;AVGPOST=0.9994;RSQ=0.9821;ERATE=0.0003;THETA=0.0019;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90155065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7000;ERATE=0.0007;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90155119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0017;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90155133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90155143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7520;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90155150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7231;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90155206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8535;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90155419 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7073;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90155435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0152;AVGPOST=0.9989;RSQ=0.9683;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90155455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90155485 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90155508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90155663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6589;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90155685 . GT G 228 PASS INDEL;BAVGPOST=0.998;BRSQ=0.740;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7676;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90155993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0206;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0023;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 90156117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6039;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90156136 rs11349215 AG A 77159 PASS INDEL;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.5330;AVGPOST=0.9845;RSQ=0.9766;ERATE=0.0037;THETA=0.0011;AC=1167;AN=2184 GT:DS:GL:BD 0.53434068 1
1 90156198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90156213 . TAGG T 49 PASS INDEL;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6380;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90156242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90156271 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0207;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 90156277 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6236;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90156353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0066;AVGPOST=0.9926;RSQ=0.5357;ERATE=0.0024;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90156540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90156578 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90156620 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90156693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90156738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8941;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90156767 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4922;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90156832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90156883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8812;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90156900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90157003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90157040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7527;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90157292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90157300 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4603;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90157390 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8810;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90157457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2488;AVGPOST=0.9941;RSQ=0.9877;ERATE=0.0004;THETA=0.0007;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 90157522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0004;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90157553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90157644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2475;AVGPOST=0.9952;RSQ=0.9895;ERATE=0.0005;THETA=0.0008;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 90157647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7422;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90157732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7198;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90157798 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7023;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90157866 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6935;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90157955 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90157996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90158116 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8311;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90158279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4221;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90158299 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6274;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90158322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9820;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90158385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6531;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90158391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9361;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90158510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0138;AVGPOST=0.9985;RSQ=0.9590;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90158592 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3351;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 90158633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90158694 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9808;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90158719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3478;AVGPOST=0.9977;RSQ=0.9956;ERATE=0.0005;THETA=0.0006;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 90158766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7994;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90158790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90158791 . CTTTGAT C 1940 PASS INDEL;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0112;AVGPOST=0.9979;RSQ=0.9301;ERATE=0.0005;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90158810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7441;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90158935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90159098 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5780;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90159109 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.628;LDAF=0.0418;AVGPOST=0.9578;RSQ=0.6039;ERATE=0.0116;THETA=0.0007;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 90159277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.930;LDAF=0.0490;AVGPOST=0.9974;RSQ=0.9800;ERATE=0.0004;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 90159412 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8587;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90159465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.549;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6255;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90159494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7200;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90159640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7743;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90159646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90160002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0224;AVGPOST=0.9993;RSQ=0.9877;ERATE=0.0003;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 90160009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8578;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90160031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0047;AVGPOST=0.9963;RSQ=0.7115;ERATE=0.0008;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90160032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5060;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90160073 . G GC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8673;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90160117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9670;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90160125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6035;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90160194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9994;RSQ=0.9887;ERATE=0.0004;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 90160251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8094;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90160526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0084;AVGPOST=0.9958;RSQ=0.8130;ERATE=0.0007;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90160692 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0034;AVGPOST=0.9959;RSQ=0.5197;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90160729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5442;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90160740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9561;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90160771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5149;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90160938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5436;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90161080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7980;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90161126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7329;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90161356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6114;AVGPOST=0.9968;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 90161460 . A ACC 11 PASS INDEL;BAVGPOST=0.997;BRSQ=0.642;LDAF=0.0064;AVGPOST=0.9931;RSQ=0.5755;ERATE=0.0021;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90161550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6093;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90161612 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9015;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90161635 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6684;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90161810 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90161883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90161916 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90161923 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0140;AVGPOST=0.9989;RSQ=0.9684;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90161995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9995;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90162097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.902;LDAF=0.0218;AVGPOST=0.9963;RSQ=0.9261;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 90162116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0449;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0004;THETA=0.0005;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 90162146 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8477;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90162245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5103;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90162287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90162306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7086;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90162354 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90162445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5114;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90162484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90162716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.7998;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90162907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0066;AVGPOST=0.9951;RSQ=0.7488;ERATE=0.0007;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90163071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.9154;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90163401 . G GA 53 PASS INDEL;BAVGPOST=0.996;BRSQ=0.719;LDAF=0.0132;AVGPOST=0.9831;RSQ=0.5103;ERATE=0.0033;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90163402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9338;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90163409 . A AC 541 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9470;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90163551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90163690 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90163919 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90163930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9751;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90164055 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0147;AVGPOST=0.9996;RSQ=0.9887;ERATE=0.0003;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90164086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3410;AVGPOST=0.9963;RSQ=0.9928;ERATE=0.0005;THETA=0.0008;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 90164099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.8039;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90164294 rs11443052 A AT 6963 PASS INDEL;BAVGPOST=0.991;BRSQ=0.926;LDAF=0.0657;AVGPOST=0.9819;RSQ=0.8927;ERATE=0.0057;THETA=0.0008;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 90164303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7239;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90164311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0463;AVGPOST=0.9994;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 90164468 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5010;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90164475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9678;ERATE=0.0004;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90164530 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9513;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90164554 . AAG A 73 PASS INDEL;BAVGPOST=0.959;BRSQ=0.286;LDAF=0.0653;AVGPOST=0.9073;RSQ=0.4230;ERATE=0.0071;THETA=0.0007;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 90164616 . AAAAT A 256 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90164624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9992;RSQ=0.9775;ERATE=0.0003;THETA=0.0010;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90164803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8599;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90164858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9949;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0007;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 90164966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8455;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90164967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0077;AVGPOST=0.9973;RSQ=0.8592;ERATE=0.0014;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90165006 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90165213 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90165427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90165485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8632;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90165519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90165550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8703;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90165591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90165703 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7036;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90165740 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9846;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90165821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9957;ERATE=0.0003;THETA=0.0010;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90165883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90165950 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90166015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9704;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90166107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6578;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90166196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0160;AVGPOST=0.9989;RSQ=0.9662;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90166355 . C CT 205 PASS INDEL;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7452;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90166440 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6145;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90166583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7764;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90166621 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.7172;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90166735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0405;AVGPOST=0.9989;RSQ=0.9907;ERATE=0.0003;THETA=0.0008;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 90166818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.905;LDAF=0.0172;AVGPOST=0.9974;RSQ=0.9378;ERATE=0.0006;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90166820 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0057;AVGPOST=0.9976;RSQ=0.8406;ERATE=0.0004;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90166891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8053;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90166896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.5982;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90166990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0101;AVGPOST=0.9959;RSQ=0.8394;ERATE=0.0006;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90167123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9686;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90167147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90167148 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0118;AVGPOST=0.9993;RSQ=0.9805;ERATE=0.0003;THETA=0.0010;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90167149 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5975;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90167150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90167283 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9611;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90167358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9995;RSQ=0.9758;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90167384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9663;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90167452 . A AAGCAGT 1226 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8912;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90167483 . T TA 56 PASS INDEL;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6618;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90167589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.7093;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90167610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9734;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0008;AC=2126;AN=2184 GT:DS:GL:BD 0.97344321 1
1 90167817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90167835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8003;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90167836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8853;ERATE=0.0004;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90167923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.964;LDAF=0.1845;AVGPOST=0.9886;RSQ=0.9735;ERATE=0.0005;THETA=0.0008;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 90168016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9470;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90168160 . A AT 4288 PASS INDEL;BAVGPOST=0.994;BRSQ=0.948;LDAF=0.0518;AVGPOST=0.9872;RSQ=0.9121;ERATE=0.0016;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 90168282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0033;AVGPOST=0.9991;RSQ=0.8789;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90168388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90168402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90168489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0122;AVGPOST=0.9985;RSQ=0.9551;ERATE=0.0004;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90168544 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0447;AVGPOST=0.9994;RSQ=0.9949;ERATE=0.0003;THETA=0.0008;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 90168762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90168888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4205;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90169020 MERGED_DEL_2_4291 AACCCAGGGAGAAGTTATAGGATCTAAGAAAACTAGTGACTCATAATTTAATAAATATATAAACAAACACAATCAAGTACAGATTGTAAAAAAAAAAAAAAAAGTTTCAAAAGAAAGCAAAAACAAACTCTGGGAACAACAAATTGGTATAGTTCAGTGGGTAGTTACAACATATTCTTGGAAGTGGTGT ATATGGCAAAAACACTGTTTAACCTTTTGAAGAAGAAGAAGAAGATGACGAAGAAGAAGACAAAAAATAAGGCAGGCAGCTTCAAATTCCCTGGTTCCAGCTCCAAAATAGAACA . . SV;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9321;ERATE=0.0004;THETA=0.0007;CIEND=-107,46;CIPOS=-119,38;END=90174189;HOMLEN=0;HOMSEQ;SOURCE=BreakDancer_90168987_90174065,EMB GT:DS:GL:BD 0.00366300 0
1 90169190 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9705;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90169500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.474;LDAF=0.0044;AVGPOST=0.9958;RSQ=0.6427;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90169673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0004;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90169676 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0071;AVGPOST=0.9991;RSQ=0.9641;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90169721 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.8936;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90169764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90169810 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7939;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90169970 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.8167;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90170163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7846;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90170234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90170265 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0140;AVGPOST=0.9976;RSQ=0.9389;ERATE=0.0003;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90170306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90170332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0031;AVGPOST=0.9981;RSQ=0.7334;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90170377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0471;AVGPOST=0.9973;RSQ=0.9812;ERATE=0.0003;THETA=0.0011;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 90170889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0108;AVGPOST=0.9961;RSQ=0.8378;ERATE=0.0007;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90170902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0229;AVGPOST=0.9968;RSQ=0.9441;ERATE=0.0009;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90171038 . T TA 380 PASS INDEL;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0075;AVGPOST=0.9943;RSQ=0.6989;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90171121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0034;AVGPOST=0.9971;RSQ=0.6483;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90171130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6104;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90171215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=0.9973;RSQ=0.7216;ERATE=0.0005;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90171374 . AT A 189 PASS INDEL;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4226;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90171433 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8319;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90171480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7315;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90171509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8006;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90171587 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90171736 . CAT C 270 PASS INDEL;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8040;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90171751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90171772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90171835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9949;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 90171900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9695;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90172111 . GA G 72 PASS INDEL;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7567;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90172127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9458;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90172158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90172352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0017;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 90172546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6851;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90172691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0569;AVGPOST=0.9987;RSQ=0.9923;ERATE=0.0004;THETA=0.0009;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 90172746 rs10535761 ACT A 14904 PASS INDEL;BAVGPOST=0.973;BRSQ=0.145;LDAF=0.8929;AVGPOST=0.8378;RSQ=0.3406;ERATE=0.0085;THETA=0.0005;AC=2045;AN=2184 GT:DS:GL:BD 0.93635529 1
1 90172826 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5308;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90172827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5687;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90172838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.2894;AVGPOST=0.9910;RSQ=0.9815;ERATE=0.0006;THETA=0.0003;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 90172890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0047;AVGPOST=0.9954;RSQ=0.5642;ERATE=0.0010;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90172898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.490;LDAF=0.0047;AVGPOST=0.9939;RSQ=0.5256;ERATE=0.0009;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90172911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0071;AVGPOST=0.9979;RSQ=0.8608;ERATE=0.0006;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90172920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.915;LDAF=0.0464;AVGPOST=0.9962;RSQ=0.9727;ERATE=0.0004;THETA=0.0007;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 90172922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.666;LDAF=0.0123;AVGPOST=0.9905;RSQ=0.7001;ERATE=0.0005;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90172932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0030;AVGPOST=0.9980;RSQ=0.7091;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90172937 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.746;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8652;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90172973 . C CA 1231 PASS INDEL;BAVGPOST=0.990;BRSQ=0.864;LDAF=0.0347;AVGPOST=0.9962;RSQ=0.9534;ERATE=0.0004;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 90172976 . A AC 411 PASS INDEL;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0059;AVGPOST=0.9980;RSQ=0.8723;ERATE=0.0003;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90172978 . AC A 1844 PASS INDEL;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0431;AVGPOST=0.9983;RSQ=0.9845;ERATE=0.0004;THETA=0.0006;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 90172979 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0440;AVGPOST=0.9970;RSQ=0.9773;ERATE=0.0004;THETA=0.0008;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 90173012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90173191 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7287;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90173223 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7546;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90173364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7375;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90173493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9664;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90173495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8987;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90173513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0146;AVGPOST=0.9997;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90173545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.7084;ERATE=0.0007;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90173554 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8471;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90173633 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0130;AVGPOST=0.9981;RSQ=0.9465;ERATE=0.0004;THETA=0.0016;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90173634 . AT A 151 PASS INDEL;BAVGPOST=0.997;BRSQ=0.427;LDAF=0.0048;AVGPOST=0.9931;RSQ=0.5094;ERATE=0.0011;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90173641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2958;AVGPOST=0.9950;RSQ=0.9904;ERATE=0.0004;THETA=0.0009;AC=647;AN=2184 GT:DS:GL:BD 0.29624543 0
1 90173651 . TC T 416 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9527;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90173657 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9483;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90173698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3367;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0004;THETA=0.0004;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 90173704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90173803 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90174150 . CGAA C 218 PASS INDEL;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7689;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90174163 . AAAG A 2676 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0157;AVGPOST=0.9987;RSQ=0.9681;ERATE=0.0003;THETA=0.0024;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90174188 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90174200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.6393;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90174351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90174453 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.8085;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90174762 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6598;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=1442;AN=2184 GT:DS:GL:BD 0.66025639 1
1 90174823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90174825 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9752;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90174829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7702;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90175234 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0122;AVGPOST=0.9994;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90175308 . TTG T 25656 PASS INDEL;BAVGPOST=0.876;BRSQ=0.725;LDAF=0.6887;AVGPOST=0.8241;RSQ=0.6730;ERATE=0.0377;THETA=0.0006;AC=1537;AN=2184 GT:DS:GL:BD 0.70375460 1
1 90175309 rs112846677 TG T 40129 PASS INDEL;BAVGPOST=0.961;BRSQ=0.585;LDAF=0.9245;AVGPOST=0.9191;RSQ=0.5480;ERATE=0.0151;THETA=0.0006;AC=2083;AN=2184 GT:DS:GL:BD 0.95375460 1
1 90175418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0048;AVGPOST=0.9951;RSQ=0.5732;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90175471 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0152;AVGPOST=0.9986;RSQ=0.9645;ERATE=0.0004;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90175561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.736;LDAF=0.9837;AVGPOST=0.9878;RSQ=0.7155;ERATE=0.0011;THETA=0.0004;AC=2154;AN=2184 GT:DS:GL:BD 0.98626375 1
1 90175769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90175792 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8438;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90175974 . A AT 2145 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0162;AVGPOST=0.9997;RSQ=0.9903;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90176131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9223;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90176234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.6164;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90176411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90176424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7893;ERATE=0.0005;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90176466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90176561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90176783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90176873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90176899 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90176932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90176940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0486;AVGPOST=0.9972;RSQ=0.9778;ERATE=0.0003;THETA=0.0008;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 90176964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6674;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90176966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90177162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0110;AVGPOST=0.9989;RSQ=0.9614;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90177439 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6770;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90177469 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90177509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.928;LDAF=0.0168;AVGPOST=0.9982;RSQ=0.9564;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90177561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.4802;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90177734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.589;LDAF=0.0032;AVGPOST=0.9960;RSQ=0.4860;ERATE=0.0012;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90177852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3359;AVGPOST=0.9931;RSQ=0.9869;ERATE=0.0008;THETA=0.0009;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 90178045 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9949;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0006;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 90178071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90178226 . CTT C 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.6009;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90178308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90178315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90178335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90178336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0003;THETA=0.0030;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90178362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90178430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90178603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90178648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90178711 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90178743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9922;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 90179041 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9943;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90179126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90179128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90179350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90179407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90179420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9499;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90179456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90179470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0160;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90179532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1639;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0006;THETA=0.0004;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 90179584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90179611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90179652 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90179665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90179703 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90179704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90179843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0018;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90180132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90180452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90180453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90180465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90180529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90180552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90180587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90180623 rs112476053 AT A 400 PASS INDEL;BAVGPOST=0.994;BRSQ=0.702;LDAF=0.0089;AVGPOST=0.9966;RSQ=0.8382;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90180707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7153;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90180838 . T TA 222 PASS INDEL;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6717;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90181325 . AT A 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5680;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90181372 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0464;AVGPOST=0.9995;RSQ=0.9959;ERATE=0.0004;THETA=0.0010;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 90181579 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9689;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90181726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8442;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90181816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7205;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90181835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90181875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90181938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0470;AVGPOST=0.9992;RSQ=0.9946;ERATE=0.0003;THETA=0.0006;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 90182054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9190;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90182398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7194;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90182414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90182542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7721;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90182550 . ATGG A 1758 PASS INDEL;BAVGPOST=0.996;BRSQ=0.887;LDAF=0.0161;AVGPOST=0.9960;RSQ=0.9007;ERATE=0.0004;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90182571 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90182591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2486;AVGPOST=0.9974;RSQ=0.9943;ERATE=0.0004;THETA=0.0004;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 90182770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90182811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5826;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90182934 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0158;AVGPOST=0.9975;RSQ=0.9481;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90182944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0463;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0004;THETA=0.0008;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 90183058 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90183167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0100;AVGPOST=0.9970;RSQ=0.8842;ERATE=0.0005;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90183191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9626;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90183239 . AC A 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.512;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4598;ERATE=0.0009;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90183331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9875;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90183414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8739;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90183567 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90183585 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90183606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6964;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90183629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6583;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90183663 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90183817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8506;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90183909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6885;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90184110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0146;AVGPOST=0.9981;RSQ=0.9550;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90184183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0033;AVGPOST=0.9985;RSQ=0.8386;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90184491 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6274;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90184570 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90184835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7759;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90184954 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0038;AVGPOST=0.9953;RSQ=0.5833;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90185106 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3535;AVGPOST=0.9956;RSQ=0.9924;ERATE=0.0003;THETA=0.0002;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 90185223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90185259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8540;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90185297 . T TC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4333;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90185361 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0472;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 90185396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0137;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90185407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90185485 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90185552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9759;ERATE=0.0003;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90185632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9014;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90185720 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0498;ERATE=0.0004;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90185983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90186019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0430;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 90186166 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0470;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0011;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 90186466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6694;AVGPOST=0.9962;RSQ=0.9922;ERATE=0.0005;THETA=0.0010;AC=1463;AN=2184 GT:DS:GL:BD 0.66987181 1
1 90186598 . C CA 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3872;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90186687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9994;RSQ=0.9607;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90186891 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90186929 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9981;RSQ=0.4116;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90186944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6203;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90186998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9583;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90187051 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90187098 . CAT C 2167 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0138;AVGPOST=0.9987;RSQ=0.9582;ERATE=0.0005;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90187132 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6249;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90187184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2514;AVGPOST=0.9974;RSQ=0.9943;ERATE=0.0005;THETA=0.0006;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 90187351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7105;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90187368 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90187422 . TAGAA T 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6352;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90187526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6753;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90187706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.876;BRSQ=0.577;LDAF=0.2625;AVGPOST=0.7862;RSQ=0.4904;ERATE=0.0555;THETA=0.0003;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 90187720 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.875;BRSQ=0.576;LDAF=0.2795;AVGPOST=0.7776;RSQ=0.4872;ERATE=0.0571;THETA=0.0003;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 90187752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.275;LDAF=0.0200;AVGPOST=0.9755;RSQ=0.5320;ERATE=0.0012;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90187762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.371;LDAF=0.0599;AVGPOST=0.9104;RSQ=0.3847;ERATE=0.0072;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 90187790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.289;LDAF=0.0477;AVGPOST=0.9350;RSQ=0.4481;ERATE=0.0056;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 90187803 rs72293443 CAAA C 2791 PASS INDEL;BAVGPOST=0.750;BRSQ=0.437;LDAF=0.3414;AVGPOST=0.7246;RSQ=0.4891;ERATE=0.0278;THETA=0.0006;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 90187812 . A AAT 39 PASS INDEL;BAVGPOST=0.986;BRSQ=0.295;LDAF=0.0286;AVGPOST=0.9572;RSQ=0.4034;ERATE=0.0029;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90188064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9441;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90188083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0127;AVGPOST=0.9991;RSQ=0.9662;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90188181 . GA G 36 PASS INDEL;BAVGPOST=0.997;BRSQ=0.541;LDAF=0.0072;AVGPOST=0.9896;RSQ=0.4478;ERATE=0.0018;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90188282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0504;AVGPOST=0.9984;RSQ=0.9875;ERATE=0.0006;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 90188386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9116;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90188486 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9986;RSQ=0.9454;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90188545 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90188616 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0417;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0007;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 90188688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90188701 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5861;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90188835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5615;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90188863 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90188874 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90188887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5838;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90189125 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90189126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90189127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0090;AVGPOST=0.9975;RSQ=0.8997;ERATE=0.0010;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90189192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9516;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90189205 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9616;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90189227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90189326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90189327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90189336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90189413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6765;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90189427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9497;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90189439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2511;AVGPOST=0.9972;RSQ=0.9940;ERATE=0.0006;THETA=0.0003;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 90189489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2507;AVGPOST=0.9981;RSQ=0.9957;ERATE=0.0005;THETA=0.0011;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 90189578 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8232;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90189612 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90189683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90189737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90189774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6677;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0004;THETA=0.0006;AC=1457;AN=2184 GT:DS:GL:BD 0.66712457 1
1 90189798 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90189938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6678;AVGPOST=0.9980;RSQ=0.9960;ERATE=0.0008;THETA=0.0005;AC=1457;AN=2184 GT:DS:GL:BD 0.66712457 1
1 90189953 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5780;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90189994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90190046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90190096 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90190152 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9084;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90190263 . TCTTA T 554 PASS INDEL;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7609;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90190270 . TCTC T 647 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8275;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90190805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90190862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90190913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90190950 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0108;AVGPOST=0.9989;RSQ=0.9610;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90190967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0036;AVGPOST=0.9996;RSQ=0.9496;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90191103 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90191203 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2513;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 90191332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6185;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90191380 . CAG C 7238 PASS INDEL;BAVGPOST=0.984;BRSQ=0.856;LDAF=0.0850;AVGPOST=0.9322;RSQ=0.7042;ERATE=0.0065;THETA=0.0003;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 90191381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.8087;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90191385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.644;LDAF=0.0247;AVGPOST=0.9766;RSQ=0.6539;ERATE=0.0090;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 90191440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6707;AVGPOST=0.9971;RSQ=0.9950;ERATE=0.0005;THETA=0.0005;AC=1463;AN=2184 GT:DS:GL:BD 0.66987181 1
1 90191460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0099;AVGPOST=0.9986;RSQ=0.9358;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90191558 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90191608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5638;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90191652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9553;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90191734 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5084;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90191866 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8154;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90191881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90191901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90192032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90192034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2504;AVGPOST=0.9983;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 90192077 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90192087 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6926;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90192124 . A AG 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90192193 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90192226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90192234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9078;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90192287 . GAGA G 492 PASS INDEL;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6982;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90192314 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90192361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90192471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90192516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0527;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 90192665 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8090;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90192761 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0535;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 90192857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8654;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90192951 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90193070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90193174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90193195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8802;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90193243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9898;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90193282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90193283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90193752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3629;AVGPOST=0.9965;RSQ=0.9939;ERATE=0.0006;THETA=0.0004;AC=790;AN=2184 GT:DS:GL:BD 0.36172161 0
1 90193753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90193759 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6192;AVGPOST=0.9965;RSQ=0.9954;ERATE=0.0004;THETA=0.0032;AC=1352;AN=2184 GT:DS:GL:BD 0.61904764 1
1 90193893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6982;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90193927 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90193940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9921;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0003;THETA=0.0003;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 90194328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0057;AVGPOST=0.9984;RSQ=0.8986;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90194447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9746;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90194448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8064;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90194462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9063;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90194465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7576;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90194468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6439;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=1406;AN=2184 GT:DS:GL:BD 0.64377290 1
1 90194552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90194589 . AG A 12 PASS INDEL;BAVGPOST=0.993;BRSQ=0.422;LDAF=0.0096;AVGPOST=0.9851;RSQ=0.4051;ERATE=0.0021;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90194610 . T TA 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.6672;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90194619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5016;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90194644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9526;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90194734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90194758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5571;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90194814 . C CA 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.556;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.4289;ERATE=0.0008;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90194887 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0051;AVGPOST=0.9981;RSQ=0.8918;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90194899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3364;AVGPOST=0.9971;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 90194960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7082;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90194970 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90195185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0060;AVGPOST=0.9977;RSQ=0.8717;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90195186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6217;AVGPOST=0.9970;RSQ=0.9951;ERATE=0.0006;THETA=0.0003;AC=1356;AN=2184 GT:DS:GL:BD 0.62087911 1
1 90195236 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=0.9991;RSQ=0.9638;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90195495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0074;AVGPOST=0.9952;RSQ=0.7638;ERATE=0.0006;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90195549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.930;LDAF=0.3632;AVGPOST=0.9825;RSQ=0.9705;ERATE=0.0007;THETA=0.0005;AC=799;AN=2184 GT:DS:GL:BD 0.36584249 0
1 90195647 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6231;AVGPOST=0.9944;RSQ=0.9908;ERATE=0.0012;THETA=0.0007;AC=1362;AN=2184 GT:DS:GL:BD 0.62362635 1
1 90195657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.780;LDAF=0.0118;AVGPOST=0.9950;RSQ=0.8343;ERATE=0.0004;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90195659 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6315;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90195662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9421;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90195709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.587;LDAF=0.0043;AVGPOST=0.9973;RSQ=0.7457;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90195780 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.9782;AVGPOST=0.9983;RSQ=0.9624;ERATE=0.0005;THETA=0.0006;AC=2138;AN=2184 GT:DS:GL:BD 0.97893775 1
1 90195910 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9507;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90195912 . ATTTAT A 220 PASS INDEL;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0141;AVGPOST=0.9903;RSQ=0.7512;ERATE=0.0009;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90195916 . ATTTTAT A 700 PASS INDEL;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0082;AVGPOST=0.9954;RSQ=0.7842;ERATE=0.0008;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90195934 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0052;AVGPOST=0.9992;RSQ=0.9326;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90196018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0074;AVGPOST=0.9988;RSQ=0.9341;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90196019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9125;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90196025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.847;LDAF=0.0137;AVGPOST=0.9972;RSQ=0.9107;ERATE=0.0005;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90196118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3883;ERATE=0.0006;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90196122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6194;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90196483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6405;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90196552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3747;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0005;THETA=0.0003;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 90196588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.960;LDAF=0.0222;AVGPOST=0.9976;RSQ=0.9548;ERATE=0.0005;THETA=0.0008;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 90196782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.892;LDAF=0.0126;AVGPOST=0.9960;RSQ=0.8763;ERATE=0.0005;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90196824 . T TA 17570 PASS INDEL;BAVGPOST=0.960;BRSQ=0.933;LDAF=0.5958;AVGPOST=0.9316;RSQ=0.8994;ERATE=0.0114;THETA=0.0003;AC=1329;AN=2184 GT:DS:GL:BD 0.60851645 1
1 90196832 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.923;LDAF=0.5857;AVGPOST=0.9282;RSQ=0.8892;ERATE=0.0229;THETA=0.0012;AC=1297;AN=2184 GT:DS:GL:BD 0.59386444 1
1 90197017 . T TG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4359;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90197062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6997;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90197073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9848;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90197186 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3781;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90197309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5203;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90197476 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0122;AVGPOST=0.9990;RSQ=0.9652;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90197485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9501;ERATE=0.0004;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90197527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90197554 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90197659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90197693 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90197850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8864;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90197953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90198034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6106;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90198074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90198428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.7007;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90198566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9489;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90198609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2507;AVGPOST=0.9978;RSQ=0.9956;ERATE=0.0003;THETA=0.0008;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 90198613 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90198704 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9918;AVGPOST=0.9991;RSQ=0.9503;ERATE=0.0004;THETA=0.0003;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 90198712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90198850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90198868 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9348;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90198901 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9454;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90198968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9579;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90198977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90199035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90199097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90199145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.3392;AVGPOST=0.9955;RSQ=0.9926;ERATE=0.0006;THETA=0.0004;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 90199161 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.665;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5790;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90199194 . TGTTAATGCC T 419 PASS INDEL;BAVGPOST=0.997;BRSQ=0.646;LDAF=0.0059;AVGPOST=0.9936;RSQ=0.5911;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90199204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9563;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90199381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90199458 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2866;AVGPOST=0.9951;RSQ=0.9910;ERATE=0.0005;THETA=0.0024;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 90199563 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9727;ERATE=0.0003;THETA=0.0032;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90199720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9483;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90199796 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8105;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90199825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9779;AVGPOST=0.9987;RSQ=0.9752;ERATE=0.0004;THETA=0.0003;AC=2137;AN=2184 GT:DS:GL:BD 0.97847986 1
1 90199829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7654;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90199882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90199890 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90199968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0057;AVGPOST=0.9984;RSQ=0.8898;ERATE=0.0006;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90200059 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90200200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2498;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 90200201 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9267;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90200225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5592;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90200595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90200764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6186;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90200814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9467;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90200929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9763;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90200943 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7645;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90201007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6269;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90201150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90201232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0106;AVGPOST=0.9983;RSQ=0.9422;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90201239 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6207;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0003;THETA=0.0009;AC=1354;AN=2184 GT:DS:GL:BD 0.61996335 1
1 90201292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90201305 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90201306 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90201419 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0324;AVGPOST=0.9978;RSQ=0.9736;ERATE=0.0004;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 90201462 . CAG C 439 PASS INDEL;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9425;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90201682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8972;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90201760 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8834;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90201816 . GT G 47 PASS INDEL;BAVGPOST=0.999;BRSQ=0.534;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5203;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90201818 . AACT A 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0037;AVGPOST=0.9957;RSQ=0.5695;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90202039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9626;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90202045 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90202049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90202067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9550;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90202216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90202359 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7734;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90202409 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90202627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7642;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90202639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6206;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0004;THETA=0.0007;AC=1354;AN=2184 GT:DS:GL:BD 0.61996335 1
1 90202648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90202671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9381;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90202795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0078;AVGPOST=0.9996;RSQ=0.9750;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90202910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5053;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90202987 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8061;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90203018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5670;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90203064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.943;LDAF=0.6111;AVGPOST=0.9767;RSQ=0.9671;ERATE=0.0008;THETA=0.0003;AC=1346;AN=2184 GT:DS:GL:BD 0.61630034 1
1 90203065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.941;LDAF=0.6128;AVGPOST=0.9782;RSQ=0.9688;ERATE=0.0007;THETA=0.0003;AC=1349;AN=2184 GT:DS:GL:BD 0.61767399 1
1 90203238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9124;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90203258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4197;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90203294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0418;AVGPOST=0.9991;RSQ=0.9910;ERATE=0.0004;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 90203401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9288;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90203417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5704;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90203588 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90203590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6942;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90203634 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90203687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6886;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90203804 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5243;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90203858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.920;LDAF=0.0128;AVGPOST=0.9968;RSQ=0.9146;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90203879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8576;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90203960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5670;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90204133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6474;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90204179 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9523;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90204322 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7477;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90204437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9978;RSQ=0.9114;ERATE=0.0005;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90204525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9495;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90204541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7467;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90204579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7215;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90204619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90204708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9823;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90204759 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0037;AVGPOST=0.9985;RSQ=0.8266;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90204780 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3688;AVGPOST=0.9931;RSQ=0.9873;ERATE=0.0009;THETA=0.0003;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 90204834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9692;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90204906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6018;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90204969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8399;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90205209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0416;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 90205244 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9835;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90205257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90205571 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9668;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90205572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5394;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90205715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9995;RSQ=0.9611;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90205750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0071;AVGPOST=0.9991;RSQ=0.9511;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90205754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7169;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90205787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0068;AVGPOST=0.9997;RSQ=0.9858;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90205843 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90205851 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90205903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7604;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90205955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9824;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90206018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.5701;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90206094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9986;RSQ=0.9192;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90206095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7668;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90206168 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9204;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90206192 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9586;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90206199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90206213 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8265;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90206304 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4759;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90206324 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9988;RSQ=0.9408;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90206351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9107;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90206364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90206407 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9474;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90206434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90206550 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.6213;AVGPOST=0.9968;RSQ=0.9944;ERATE=0.0004;THETA=0.0007;AC=1355;AN=2184 GT:DS:GL:BD 0.62042123 1
1 90206552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7721;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90206584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90206950 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7298;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90206983 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9432;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90207039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9984;ERATE=0.0003;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90207195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9254;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90207196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4672;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90207254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4765;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90207370 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0080;AVGPOST=0.9985;RSQ=0.9344;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90207405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4109;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90207443 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9915;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90207613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5128;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90207683 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90207685 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90207704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9981;RSQ=0.9260;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90207865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9339;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90207897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9474;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90207908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9996;RSQ=0.9885;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90208215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90208252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90208388 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9656;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90208636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90208751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8589;ERATE=0.0005;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90208767 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9876;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90208799 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90208820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.9074;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90208884 . TC T 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7388;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90208907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90209026 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9240;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90209071 . GACGGCTTGAC G 709 PASS INDEL;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9587;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90209168 . AG A 366 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9466;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90209300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9242;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90209550 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9623;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90209630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90209646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0049;AVGPOST=0.9960;RSQ=0.7088;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90209653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7166;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90209738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9750;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90209801 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4780;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90209812 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5104;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90209851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9713;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90209937 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.9780;AVGPOST=0.9989;RSQ=0.9747;ERATE=0.0005;THETA=0.0008;AC=2137;AN=2184 GT:DS:GL:BD 0.97847986 1
1 90209973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6474;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90209974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.285;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.4005;ERATE=0.0008;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90210016 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.8735;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90210173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9989;RSQ=0.9331;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90210204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4359;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90210508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8079;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90210551 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90210632 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90210684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90210727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7527;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90210734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.9989;AVGPOST=0.9986;RSQ=0.4774;ERATE=0.0003;THETA=0.0004;AC=2183;AN=2184 GT:DS:GL:BD 0.99954212 1
1 90210777 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3714;AVGPOST=0.9971;RSQ=0.9950;ERATE=0.0003;THETA=0.0004;AC=810;AN=2184 GT:DS:GL:BD 0.37087911 0
1 90210821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6208;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0005;THETA=0.0004;AC=1354;AN=2184 GT:DS:GL:BD 0.61996335 1
1 90210847 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9794;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90211105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.563;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90211216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90211541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90211549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8083;ERATE=0.0015;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90211612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5992;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90211678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0088;AVGPOST=0.9985;RSQ=0.9386;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90211713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2507;AVGPOST=0.9977;RSQ=0.9945;ERATE=0.0005;THETA=0.0007;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 90211781 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90211806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90212141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9366;ERATE=0.0004;THETA=0.0056;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90212179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90212255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6316;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90212284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9788;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90212514 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8509;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90212550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.704;LDAF=0.0039;AVGPOST=0.9978;RSQ=0.7803;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90212583 . GTA G 53 PASS INDEL;BAVGPOST=0.973;BRSQ=0.364;LDAF=0.0461;AVGPOST=0.9436;RSQ=0.5081;ERATE=0.0071;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 90215332 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.772;BRSQ=0.611;LDAF=0.3729;AVGPOST=0.8130;RSQ=0.7144;ERATE=0.0148;THETA=0.0011;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 90215505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.876;LDAF=0.0071;AVGPOST=0.9930;RSQ=0.6077;ERATE=0.0010;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90215506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0034;AVGPOST=0.9974;RSQ=0.7140;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90218376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.934;LDAF=0.1048;AVGPOST=0.9733;RSQ=0.8876;ERATE=0.0007;THETA=0.0006;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 90218477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0093;AVGPOST=0.9881;RSQ=0.4611;ERATE=0.0014;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90218577 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2843;AVGPOST=0.9912;RSQ=0.9835;ERATE=0.0011;THETA=0.0004;AC=618;AN=2184 GT:DS:GL:BD 0.28296703 0
1 90218594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8320;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90218613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6223;AVGPOST=0.9945;RSQ=0.9918;ERATE=0.0007;THETA=0.0007;AC=1356;AN=2184 GT:DS:GL:BD 0.62087911 1
1 90218644 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90218756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0068;AVGPOST=0.9995;RSQ=0.9640;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90218843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7719;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90218930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.5103;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90218944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0074;AVGPOST=0.9973;RSQ=0.8587;ERATE=0.0010;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90219137 . G GT 2056 PASS INDEL;BAVGPOST=0.975;BRSQ=0.770;LDAF=0.0834;AVGPOST=0.9304;RSQ=0.6647;ERATE=0.0101;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 90219147 . TG T 114 PASS INDEL;BAVGPOST=0.976;BRSQ=0.397;LDAF=0.0454;AVGPOST=0.9372;RSQ=0.4348;ERATE=0.0099;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 90219312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.5491;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90219351 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8313;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90219440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6582;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90219491 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90219521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6035;ERATE=0.0004;THETA=0.0048;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90219638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90219641 . AC A 2215 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0125;AVGPOST=0.9988;RSQ=0.9645;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90219774 . AG A 20397 PASS INDEL;BAVGPOST=0.971;BRSQ=0.949;LDAF=0.6199;AVGPOST=0.9774;RSQ=0.9669;ERATE=0.0014;THETA=0.0003;AC=1361;AN=2184 GT:DS:GL:BD 0.62316847 1
1 90219775 rs34747442 GA G 73450 PASS INDEL;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.6270;AVGPOST=0.9920;RSQ=0.9877;ERATE=0.0003;THETA=0.0005;AC=1368;AN=2184 GT:DS:GL:BD 0.62637365 1
1 90220024 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7737;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90220029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8067;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90220031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8945;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90220107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7160;ERATE=0.0004;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90220314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6969;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90220367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9654;ERATE=0.0003;THETA=0.0024;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90220387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6378;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90220469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90220581 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90220671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5502;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90220744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0110;AVGPOST=0.9995;RSQ=0.9792;ERATE=0.0003;THETA=0.0001;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90220780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.3433;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90220907 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90221011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.2932;AVGPOST=0.9958;RSQ=0.9921;ERATE=0.0006;THETA=0.0006;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 90221013 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8528;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90221051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90221106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90221128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6144;AVGPOST=0.9969;RSQ=0.9952;ERATE=0.0006;THETA=0.0011;AC=1341;AN=2184 GT:DS:GL:BD 0.61401099 1
1 90221353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0062;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90221441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3656;AVGPOST=0.9922;RSQ=0.9887;ERATE=0.0019;THETA=0.0003;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 90221475 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90221484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8976;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90221485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0076;AVGPOST=0.9986;RSQ=0.9430;ERATE=0.0003;THETA=0.0030;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90221703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8832;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90221736 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90221754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.9938;AVGPOST=0.9976;RSQ=0.8638;ERATE=0.0003;THETA=0.0006;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 90221858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90221969 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90222024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4790;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90222025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.948;LDAF=0.0917;AVGPOST=0.9831;RSQ=0.9271;ERATE=0.0006;THETA=0.0004;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 90222130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6549;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90222256 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0061;AVGPOST=0.9986;RSQ=0.9189;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90222352 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.832;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9488;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90222437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90222531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8323;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90222582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9361;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90222595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8632;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90222596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0335;AVGPOST=0.9992;RSQ=0.9893;ERATE=0.0003;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 90222614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0056;AVGPOST=0.9983;RSQ=0.8845;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90222653 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.962;LDAF=0.0397;AVGPOST=0.9969;RSQ=0.9682;ERATE=0.0004;THETA=0.0007;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 90222907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90222936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90223037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90223073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3652;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=797;AN=2184 GT:DS:GL:BD 0.36492673 0
1 90223203 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.9941;AVGPOST=0.9986;RSQ=0.9068;ERATE=0.0003;THETA=0.0003;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 90223255 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2437;AVGPOST=0.9981;RSQ=0.9956;ERATE=0.0005;THETA=0.0004;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 90223394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90223399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90223400 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.1825;AVGPOST=0.9944;RSQ=0.9869;ERATE=0.0004;THETA=0.0006;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 90223603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6947;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90223905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.3398;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90223928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8266;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90224047 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0252;AVGPOST=0.9977;RSQ=0.9669;ERATE=0.0004;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 90224049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90224099 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8075;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90224117 . CAG C 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6132;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90224366 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90224432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8252;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90224477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90224641 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90224828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9461;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90224833 . A AG 1567 PASS INDEL;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0066;AVGPOST=0.9977;RSQ=0.8767;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90224997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0061;AVGPOST=0.9977;RSQ=0.8403;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90224998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90225025 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90225141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6407;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90225153 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.8164;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90225167 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90225463 . A AC 19 PASS INDEL;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0036;AVGPOST=0.9955;RSQ=0.4873;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90225548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8855;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90225719 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9874;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90226093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7601;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90226108 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6248;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90226134 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5742;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90226191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8578;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90226306 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6112;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90226473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5562;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90226608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7398;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90226624 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90226693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.644;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.6281;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90226748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.702;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8189;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90226800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90226801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2938;AVGPOST=0.9954;RSQ=0.9916;ERATE=0.0007;THETA=0.0005;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 90226865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.3624;AVGPOST=0.9872;RSQ=0.9803;ERATE=0.0012;THETA=0.0004;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 90226885 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.719;LDAF=0.0171;AVGPOST=0.9917;RSQ=0.7980;ERATE=0.0007;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90226960 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90226989 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5678;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90227070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0104;AVGPOST=0.9984;RSQ=0.9424;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90227074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9081;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90227219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9624;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90227282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7056;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90227302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90227324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9908;ERATE=0.0004;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90227517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90227649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3536;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0007;THETA=0.0004;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 90227669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90227682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2432;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 90227877 . CT C 130 PASS INDEL;BAVGPOST=0.996;BRSQ=0.323;LDAF=0.0038;AVGPOST=0.9960;RSQ=0.5472;ERATE=0.0009;THETA=0.0033;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90227878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.9928;AVGPOST=0.9983;RSQ=0.9136;ERATE=0.0004;THETA=0.0008;AC=2170;AN=2184 GT:DS:GL:BD 0.99358976 1
1 90227920 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5124;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90227965 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8946;ERATE=0.0003;THETA=0.0034;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90227972 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9631;ERATE=0.0003;THETA=0.0062;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90228020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90228224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0075;AVGPOST=0.9993;RSQ=0.9613;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90228260 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90228302 rs111444700 G GGGAAAAAC 107843 PASS INDEL;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.6417;AVGPOST=0.9901;RSQ=0.9835;ERATE=0.0020;THETA=0.0005;AC=1405;AN=2184 GT:DS:GL:BD 0.64331502 1
1 90228377 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3479;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 90228457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90228471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0120;AVGPOST=0.9971;RSQ=0.8963;ERATE=0.0009;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90228519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3848;AVGPOST=0.9963;RSQ=0.9940;ERATE=0.0008;THETA=0.0005;AC=838;AN=2184 GT:DS:GL:BD 0.38369963 0
1 90228536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90228559 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0133;AVGPOST=0.9974;RSQ=0.9289;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90228587 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.929;LDAF=0.0481;AVGPOST=0.9947;RSQ=0.9575;ERATE=0.0005;THETA=0.0002;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 90228663 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0059;AVGPOST=0.9983;RSQ=0.8819;ERATE=0.0005;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90228667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6016;AVGPOST=0.9662;RSQ=0.9464;ERATE=0.0049;THETA=0.0004;AC=1320;AN=2184 GT:DS:GL:BD 0.60439563 1
1 90228672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3750;AVGPOST=0.9899;RSQ=0.9835;ERATE=0.0012;THETA=0.0004;AC=821;AN=2184 GT:DS:GL:BD 0.37591577 0
1 90228728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0134;AVGPOST=0.9974;RSQ=0.9156;ERATE=0.0005;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90228842 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90228897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6799;ERATE=0.0003;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90228920 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9432;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90229014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90229187 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3458;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0006;THETA=0.0006;AC=756;AN=2184 GT:DS:GL:BD 0.34615386 0
1 90229206 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8385;ERATE=0.0003;THETA=0.0026;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90229297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2433;AVGPOST=0.9980;RSQ=0.9958;ERATE=0.0003;THETA=0.0016;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 90229313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7234;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0003;THETA=0.0007;AC=1580;AN=2184 GT:DS:GL:BD 0.72344321 1
1 90229335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90229395 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.3477;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 90229403 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3470;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 90229452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9404;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90229467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90229474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2615;AVGPOST=0.9976;RSQ=0.9951;ERATE=0.0005;THETA=0.0005;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 90229526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3469;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0004;THETA=0.0004;AC=758;AN=2184 GT:DS:GL:BD 0.34706959 0
1 90229795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5535;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90229801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7762;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90229867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9939;AVGPOST=0.9997;RSQ=0.9752;ERATE=0.0003;THETA=0.0003;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 90229883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.7650;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90229984 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90230001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9172;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90230119 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3492;AVGPOST=0.9921;RSQ=0.9870;ERATE=0.0023;THETA=0.0031;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 90230229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7896;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90230670 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6803;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90230863 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7756;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90231121 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6063;AVGPOST=0.9967;RSQ=0.9943;ERATE=0.0006;THETA=0.0007;AC=1325;AN=2184 GT:DS:GL:BD 0.60668498 1
1 90231341 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6397;AVGPOST=0.9974;RSQ=0.9957;ERATE=0.0007;THETA=0.0004;AC=1397;AN=2184 GT:DS:GL:BD 0.63965201 1
1 90231448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9298;ERATE=0.0004;THETA=0.0017;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90231595 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=0.9992;RSQ=0.9734;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90231687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90231709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3757;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0006;THETA=0.0005;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 90231721 rs4000812 G GAC 140876 PASS INDEL;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.9913;AVGPOST=0.9959;RSQ=0.8245;ERATE=0.0010;THETA=0.0003;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 90231733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0033;AVGPOST=0.9991;RSQ=0.8735;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90231738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6443;AVGPOST=0.9970;RSQ=0.9948;ERATE=0.0006;THETA=0.0002;AC=1408;AN=2184 GT:DS:GL:BD 0.64468867 1
1 90231767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7496;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90231854 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7728;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90231869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7518;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90231904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.837;LDAF=0.0122;AVGPOST=0.9932;RSQ=0.7909;ERATE=0.0009;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90231946 . T TC 12504 PASS INDEL;BAVGPOST=0.983;BRSQ=0.972;LDAF=0.3417;AVGPOST=0.9897;RSQ=0.9830;ERATE=0.0006;THETA=0.0003;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 90231947 rs72510746 C CA 48501 PASS INDEL;BAVGPOST=0.985;BRSQ=0.974;LDAF=0.3464;AVGPOST=0.9925;RSQ=0.9872;ERATE=0.0004;THETA=0.0003;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 90231948 . A AT 12314 PASS INDEL;BAVGPOST=0.982;BRSQ=0.968;LDAF=0.3413;AVGPOST=0.9844;RSQ=0.9749;ERATE=0.0015;THETA=0.0003;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 90231962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90231981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9446;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90232026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90232108 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9940;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 90232168 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9357;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90232180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3443;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 90232227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9939;AVGPOST=0.9996;RSQ=0.9680;ERATE=0.0003;THETA=0.0010;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 90232331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90232397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8928;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90232447 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2429;AVGPOST=0.9982;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 90232562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9977;RSQ=0.8427;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90232566 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9937;AVGPOST=0.9993;RSQ=0.9479;ERATE=0.0004;THETA=0.0006;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 90232649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9938;AVGPOST=0.9994;RSQ=0.9546;ERATE=0.0004;THETA=0.0004;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 90232705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9932;AVGPOST=0.9981;RSQ=0.8767;ERATE=0.0006;THETA=0.0004;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 90232997 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9622;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90233065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90233068 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5903;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=1290;AN=2184 GT:DS:GL:BD 0.59065932 1
1 90233103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0240;AVGPOST=0.9988;RSQ=0.9779;ERATE=0.0003;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 90233130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0267;AVGPOST=0.9992;RSQ=0.9910;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 90233151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.8072;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90233162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90233163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0170;AVGPOST=0.9989;RSQ=0.9752;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 90233177 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9492;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90233226 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3759;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0006;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 90233324 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5465;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90233424 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90233439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5890;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0006;THETA=0.0004;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 90233542 . C CT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90233552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8622;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90233602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.842;LDAF=0.0079;AVGPOST=0.9982;RSQ=0.8968;ERATE=0.0011;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90233630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.5966;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90233655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90233803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90233849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0065;AVGPOST=0.9988;RSQ=0.9294;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90233877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9163;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90233892 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.769;LDAF=0.9907;AVGPOST=0.9940;RSQ=0.7525;ERATE=0.0012;THETA=0.0004;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 90233949 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.642;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.8114;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90234052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.9939;AVGPOST=0.9995;RSQ=0.9618;ERATE=0.0004;THETA=0.0004;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 90234055 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2888;AVGPOST=0.9960;RSQ=0.9927;ERATE=0.0007;THETA=0.0008;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 90234103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6256;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90234104 . GCATAACTA G 156 PASS INDEL;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5930;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90234257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2412;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 90234342 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6733;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90234366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0244;AVGPOST=0.9987;RSQ=0.9780;ERATE=0.0003;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 90234396 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8688;ERATE=0.0004;THETA=0.0047;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90234460 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4695;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90234596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90234641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5700;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90234821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0133;AVGPOST=0.9963;RSQ=0.8967;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90234906 . AC A 1189 PASS INDEL;BAVGPOST=0.993;BRSQ=0.745;LDAF=0.0106;AVGPOST=0.9945;RSQ=0.7773;ERATE=0.0005;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90234934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4606;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90234992 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9771;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90235015 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90235172 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6799;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90235185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3262;AVGPOST=0.9963;RSQ=0.9935;ERATE=0.0004;THETA=0.0003;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 90235204 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.918;LDAF=0.0212;AVGPOST=0.9980;RSQ=0.9639;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90235254 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8482;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90235379 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8215;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90235548 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7897;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90235572 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8343;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90235598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90235649 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3822;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=835;AN=2184 GT:DS:GL:BD 0.38232601 0
1 90235651 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90235759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.9940;AVGPOST=0.9996;RSQ=0.9712;ERATE=0.0003;THETA=0.0005;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 90235815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90235833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90235865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90235901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3780;AVGPOST=0.9970;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=824;AN=2184 GT:DS:GL:BD 0.37728938 0
1 90235949 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9149;ERATE=0.0006;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90235992 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90236044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6692;ERATE=0.0003;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90236070 . TA T 37 PASS INDEL;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0041;AVGPOST=0.9980;RSQ=0.7851;ERATE=0.0004;THETA=0.0021;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90236071 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0061;AVGPOST=0.9982;RSQ=0.8751;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90236083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90236173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90236256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0146;AVGPOST=0.9990;RSQ=0.9707;ERATE=0.0004;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90236261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.8382;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90236290 . AG A 598 PASS INDEL;BAVGPOST=0.996;BRSQ=0.783;LDAF=0.0107;AVGPOST=0.9925;RSQ=0.7305;ERATE=0.0005;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90236385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90236488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90236610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0042;AVGPOST=0.9978;RSQ=0.7754;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90236769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7015;ERATE=0.0006;THETA=0.0055;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90236797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3855;AVGPOST=0.9730;RSQ=0.9568;ERATE=0.0051;THETA=0.0013;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 90236901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0072;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90237066 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4989;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90237076 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3845;AVGPOST=0.9970;RSQ=0.9946;ERATE=0.0009;THETA=0.0007;AC=841;AN=2184 GT:DS:GL:BD 0.38507327 0
1 90237177 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9984;RSQ=0.9514;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90237262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.5897;AVGPOST=0.9900;RSQ=0.9829;ERATE=0.0016;THETA=0.0005;AC=1295;AN=2184 GT:DS:GL:BD 0.59294873 1
1 90237467 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0059;AVGPOST=0.9976;RSQ=0.8494;ERATE=0.0005;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90237600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90237602 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3847;AVGPOST=0.9974;RSQ=0.9956;ERATE=0.0006;THETA=0.0002;AC=839;AN=2184 GT:DS:GL:BD 0.38415751 0
1 90237729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8600;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90237733 . TG T 148 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7265;ERATE=0.0004;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90237804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3054;AVGPOST=0.9978;RSQ=0.9960;ERATE=0.0005;THETA=0.0013;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 90237937 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7390;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90238018 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.977;LDAF=0.1766;AVGPOST=0.9930;RSQ=0.9837;ERATE=0.0005;THETA=0.0003;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 90238031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0509;AVGPOST=0.9958;RSQ=0.9690;ERATE=0.0004;THETA=0.0002;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 90238053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.8851;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90238155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3738;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0003;THETA=0.0006;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 90238161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9375;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90238271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9753;AVGPOST=0.9991;RSQ=0.9858;ERATE=0.0004;THETA=0.0006;AC=2130;AN=2184 GT:DS:GL:BD 0.97527474 1
1 90238305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7058;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90238308 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5240;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90238332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5822;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90238427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90238583 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9700;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90238690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0065;AVGPOST=0.9993;RSQ=0.9544;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90238715 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90238738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3061;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 90238812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9565;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90238834 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6181;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90238890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90238967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3742;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 90239187 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90239190 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5661;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90239279 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90239483 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0034;AVGPOST=0.9982;RSQ=0.7675;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90239523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.9862;AVGPOST=0.9990;RSQ=0.9755;ERATE=0.0003;THETA=0.0004;AC=2154;AN=2184 GT:DS:GL:BD 0.98626375 1
1 90239549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9309;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90239551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9912;AVGPOST=0.9996;RSQ=0.9823;ERATE=0.0003;THETA=0.0004;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 90239695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90239803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9488;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90239842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90239997 . T TC 412 PASS INDEL;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0084;AVGPOST=0.9957;RSQ=0.8067;ERATE=0.0009;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90239998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0098;AVGPOST=0.9946;RSQ=0.7949;ERATE=0.0013;THETA=0.0041;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90240156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0081;AVGPOST=0.9967;RSQ=0.8533;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90240212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.924;LDAF=0.0124;AVGPOST=0.9952;RSQ=0.8655;ERATE=0.0006;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90240272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7685;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90240288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.5028;ERATE=0.0004;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90240300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.9044;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90240317 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.6457;AVGPOST=0.9949;RSQ=0.9921;ERATE=0.0010;THETA=0.0002;AC=1412;AN=2184 GT:DS:GL:BD 0.64652014 1
1 90240351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8535;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90240366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6768;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90240446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90240982 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6447;AVGPOST=0.9965;RSQ=0.9945;ERATE=0.0007;THETA=0.0007;AC=1408;AN=2184 GT:DS:GL:BD 0.64468867 1
1 90241025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90241096 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8172;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90241121 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8424;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90241152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5543;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90241188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90241216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5655;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90241228 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9909;AVGPOST=0.9990;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 90241279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0119;AVGPOST=0.9998;RSQ=0.9927;ERATE=0.0003;THETA=0.0029;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90241470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6442;AVGPOST=0.9973;RSQ=0.9962;ERATE=0.0004;THETA=0.0005;AC=1406;AN=2184 GT:DS:GL:BD 0.64377290 1
1 90241572 rs10533987 G GTA 29341 PASS INDEL;BAVGPOST=0.969;BRSQ=0.940;LDAF=0.6644;AVGPOST=0.9250;RSQ=0.8851;ERATE=0.0242;THETA=0.0005;AC=1476;AN=2184 GT:DS:GL:BD 0.67582417 1
1 90241729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90241844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0116;AVGPOST=0.9985;RSQ=0.9483;ERATE=0.0004;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90241849 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.658;LDAF=0.0084;AVGPOST=0.9951;RSQ=0.7808;ERATE=0.0004;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90241918 rs59063200 ATAGATAGATAGG A 34847 PASS INDEL;BAVGPOST=0.833;BRSQ=0.389;LDAF=0.7619;AVGPOST=0.7538;RSQ=0.4080;ERATE=0.0509;THETA=0.0008;AC=1851;AN=2184 GT:DS:GL:BD 0.84752744 1
1 90241922 rs59063200 ATAGATAGG A 44982 PASS INDEL;BAVGPOST=0.870;BRSQ=0.432;LDAF=0.8047;AVGPOST=0.8006;RSQ=0.4607;ERATE=0.0326;THETA=0.0007;AC=1888;AN=2184 GT:DS:GL:BD 0.86446887 1
1 90241926 rs59063200 ATAGG A 39712 PASS INDEL;BAVGPOST=0.957;BRSQ=0.512;LDAF=0.9348;AVGPOST=0.9245;RSQ=0.5076;ERATE=0.0093;THETA=0.0007;AC=2091;AN=2184 GT:DS:GL:BD 0.95741761 1
1 90241939 . TA T 2682 PASS INDEL;BAVGPOST=0.886;BRSQ=0.479;LDAF=0.1427;AVGPOST=0.8614;RSQ=0.5385;ERATE=0.0168;THETA=0.0005;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 90241955 . TA T 102 PASS INDEL;BAVGPOST=0.993;BRSQ=0.564;LDAF=0.0244;AVGPOST=0.9680;RSQ=0.4749;ERATE=0.0044;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90241968 rs71584954 AGAT A 23663 PASS INDEL;BAVGPOST=0.946;BRSQ=0.899;LDAF=0.3004;AVGPOST=0.9664;RSQ=0.9466;ERATE=0.0019;THETA=0.0004;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 90241971 rs71584954 T TA 24319 PASS INDEL;BAVGPOST=0.946;BRSQ=0.899;LDAF=0.3013;AVGPOST=0.9681;RSQ=0.9484;ERATE=0.0017;THETA=0.0029;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 90242142 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90242143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90242149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90242331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0069;AVGPOST=0.9994;RSQ=0.9560;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90242428 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3269;AVGPOST=0.9932;RSQ=0.9889;ERATE=0.0009;THETA=0.0005;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 90242532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0040;AVGPOST=0.9977;RSQ=0.7297;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90242589 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.3158;AVGPOST=0.9961;RSQ=0.9934;ERATE=0.0005;THETA=0.0005;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 90242725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.949;LDAF=0.3215;AVGPOST=0.9541;RSQ=0.9313;ERATE=0.0029;THETA=0.0003;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 90242764 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.694;LDAF=0.9548;AVGPOST=0.9425;RSQ=0.5266;ERATE=0.0028;THETA=0.0002;AC=2112;AN=2184 GT:DS:GL:BD 0.96703297 1
1 90242785 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.802;BRSQ=0.523;LDAF=0.2234;AVGPOST=0.8746;RSQ=0.7489;ERATE=0.0075;THETA=0.0005;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 90242958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8883;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90242988 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3245;AVGPOST=0.9966;RSQ=0.9944;ERATE=0.0004;THETA=0.0006;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 90243077 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.6947;ERATE=0.0008;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90243079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6064;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90243097 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9750;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90243140 . GT G 15 PASS INDEL;BAVGPOST=0.997;BRSQ=0.694;LDAF=0.0127;AVGPOST=0.9857;RSQ=0.5918;ERATE=0.0034;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90243254 . GT G 576 PASS INDEL;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0043;AVGPOST=0.9981;RSQ=0.8124;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90243265 . TACAC T 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6382;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90243335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0123;AVGPOST=0.9977;RSQ=0.9198;ERATE=0.0006;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90243348 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0031;AVGPOST=0.9981;RSQ=0.7285;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90243500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.9883;AVGPOST=0.9970;RSQ=0.8974;ERATE=0.0006;THETA=0.0007;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 90243531 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.9033;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90243552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0135;AVGPOST=0.9983;RSQ=0.9505;ERATE=0.0004;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90243590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7020;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90243692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3157;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0006;THETA=0.0004;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 90243758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5316;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90243771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6370;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=1391;AN=2184 GT:DS:GL:BD 0.63690478 1
1 90244009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3160;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0006;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 90244083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.975;LDAF=0.6245;AVGPOST=0.9803;RSQ=0.9719;ERATE=0.0060;THETA=0.0004;AC=1379;AN=2184 GT:DS:GL:BD 0.63141024 1
1 90244364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0085;AVGPOST=0.9986;RSQ=0.9247;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90244386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.677;LDAF=0.0171;AVGPOST=0.9950;RSQ=0.8807;ERATE=0.0004;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90244421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0229;AVGPOST=0.9959;RSQ=0.9247;ERATE=0.0005;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 90244656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2745;AVGPOST=0.9955;RSQ=0.9902;ERATE=0.0005;THETA=0.0017;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 90244662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90244906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6934;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90244949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90245101 . A AC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5558;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90245104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0053;AVGPOST=0.9975;RSQ=0.8458;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90245153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6023;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90245164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0109;AVGPOST=0.9998;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90245167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3060;AVGPOST=0.9969;RSQ=0.9950;ERATE=0.0009;THETA=0.0003;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 90245210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9986;RSQ=0.9499;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90245306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7382;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90245426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7730;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90245647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.543;LDAF=0.0065;AVGPOST=0.9946;RSQ=0.6574;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90245672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6658;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90245688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4353;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90245711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6899;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90245736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6370;AVGPOST=0.9813;RSQ=0.9716;ERATE=0.0023;THETA=0.0010;AC=1393;AN=2184 GT:DS:GL:BD 0.63782054 1
1 90245821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8309;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90245876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90245921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9326;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90245976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7891;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90246069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3348;AVGPOST=0.9974;RSQ=0.9956;ERATE=0.0006;THETA=0.0002;AC=733;AN=2184 GT:DS:GL:BD 0.33562270 0
1 90246184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9792;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90246358 . TCA T 871 PASS INDEL;BAVGPOST=0.996;BRSQ=0.778;LDAF=0.0100;AVGPOST=0.9934;RSQ=0.7380;ERATE=0.0008;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90246437 . CT C 374 PASS INDEL;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0044;AVGPOST=0.9973;RSQ=0.7568;ERATE=0.0008;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90246532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90246593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0075;AVGPOST=0.9994;RSQ=0.9666;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90246649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0173;AVGPOST=0.9990;RSQ=0.9773;ERATE=0.0003;THETA=0.0015;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 90246725 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90246743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9637;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90246777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.876;LDAF=0.0174;AVGPOST=0.9956;RSQ=0.8946;ERATE=0.0006;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90246828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9685;ERATE=0.0003;THETA=0.0019;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90246906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.6399;AVGPOST=0.9950;RSQ=0.9930;ERATE=0.0006;THETA=0.0005;AC=1394;AN=2184 GT:DS:GL:BD 0.63827837 1
1 90246993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90247026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7652;ERATE=0.0004;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90247139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.7141;AVGPOST=0.9957;RSQ=0.9926;ERATE=0.0005;THETA=0.0009;AC=1560;AN=2184 GT:DS:GL:BD 0.71428573 1
1 90247180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9763;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90247203 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0115;AVGPOST=0.9978;RSQ=0.9233;ERATE=0.0004;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90247206 . A ACAATT 904 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0064;AVGPOST=0.9986;RSQ=0.9043;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90247419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90247463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0036;AVGPOST=0.9976;RSQ=0.7237;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90247468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8800;ERATE=0.0003;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90247476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0532;AVGPOST=0.9984;RSQ=0.9909;ERATE=0.0003;THETA=0.0041;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 90247498 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8965;ERATE=0.0003;THETA=0.0073;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90247506 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.729;LDAF=0.0103;AVGPOST=0.9906;RSQ=0.6532;ERATE=0.0015;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90247590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0113;AVGPOST=0.9984;RSQ=0.9449;ERATE=0.0004;THETA=0.0018;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90247752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0213;AVGPOST=0.9982;RSQ=0.9715;ERATE=0.0003;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90247975 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.871;LDAF=0.0152;AVGPOST=0.9968;RSQ=0.9144;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90248077 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0311;AVGPOST=0.9989;RSQ=0.9886;ERATE=0.0004;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 90248248 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6563;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0003;THETA=0.0032;AC=1434;AN=2184 GT:DS:GL:BD 0.65659338 1
1 90248302 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6558;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=1432;AN=2184 GT:DS:GL:BD 0.65567768 1
1 90248328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0029;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90248625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9996;RSQ=0.9797;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90248769 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9813;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90248834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6830;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90249049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0071;AVGPOST=0.9987;RSQ=0.9343;ERATE=0.0003;THETA=0.0079;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90249086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9079;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90249113 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7060;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90249117 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0047;AVGPOST=0.9973;RSQ=0.7767;ERATE=0.0004;THETA=0.0054;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90249289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90249389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90249390 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90249446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9661;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90249588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0145;AVGPOST=0.9994;RSQ=0.9812;ERATE=0.0003;THETA=0.0092;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90249663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7486;AVGPOST=0.9968;RSQ=0.9940;ERATE=0.0007;THETA=0.0007;AC=1634;AN=2184 GT:DS:GL:BD 0.74816847 1
1 90249779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90249828 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7659;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90249829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7491;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0004;THETA=0.0008;AC=1636;AN=2184 GT:DS:GL:BD 0.74908423 1
1 90249837 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9102;ERATE=0.0004;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90249941 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0093;AVGPOST=0.9989;RSQ=0.9536;ERATE=0.0004;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90249989 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9908;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90250041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0078;AVGPOST=0.9976;RSQ=0.8896;ERATE=0.0007;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90250064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9671;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90250089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90250091 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9373;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90250216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9993;RSQ=0.9767;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90250355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90250573 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8656;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90250579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90250681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90250798 . G GA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5123;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90251058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4629;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90251106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90251177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6536;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90251297 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9132;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90251401 . CA C 139 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7164;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90251404 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90251426 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8370;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90251490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90251558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8096;ERATE=0.0004;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90251584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6766;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0005;THETA=0.0005;AC=1479;AN=2184 GT:DS:GL:BD 0.67719781 1
1 90251626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7158;AVGPOST=0.9962;RSQ=0.9935;ERATE=0.0005;THETA=0.0005;AC=1564;AN=2184 GT:DS:GL:BD 0.71611720 1
1 90251721 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.757;LDAF=0.0433;AVGPOST=0.9804;RSQ=0.8278;ERATE=0.0006;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 90251752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0489;AVGPOST=0.9972;RSQ=0.9772;ERATE=0.0005;THETA=0.0009;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 90251782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0061;AVGPOST=0.9932;RSQ=0.5957;ERATE=0.0007;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90251896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9478;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90251925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5905;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90251934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90251996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6677;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0007;THETA=0.0003;AC=1457;AN=2184 GT:DS:GL:BD 0.66712457 1
1 90252046 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7230;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90252050 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9869;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90252187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7153;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0003;THETA=0.0012;AC=1562;AN=2184 GT:DS:GL:BD 0.71520144 1
1 90252309 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90252477 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6053;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90252508 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8736;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90252729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7248;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90252757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9720;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90252859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6569;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90252870 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0170;AVGPOST=0.9997;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 90252948 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0166;AVGPOST=0.9963;RSQ=0.9085;ERATE=0.0006;THETA=0.0015;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90252971 . G GTC 636 PASS INDEL;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0064;AVGPOST=0.9956;RSQ=0.7464;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90253083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=0.9992;RSQ=0.9754;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90253189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90253242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0072;AVGPOST=0.9990;RSQ=0.9454;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90253320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6927;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90253322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0033;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90253367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90253478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0222;AVGPOST=0.9994;RSQ=0.9902;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 90253481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90253581 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90253596 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7829;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90253641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90253765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0082;AVGPOST=0.9984;RSQ=0.9208;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90253791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0137;AVGPOST=0.9997;RSQ=0.9907;ERATE=0.0003;THETA=0.0012;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90253803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0053;AVGPOST=0.9991;RSQ=0.9343;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90253803 . AT A 75 PASS INDEL;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0045;AVGPOST=0.9957;RSQ=0.6603;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90253923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.904;LDAF=0.0723;AVGPOST=0.9871;RSQ=0.9333;ERATE=0.0004;THETA=0.0005;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 90254104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90254126 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0027;AVGPOST=0.9985;RSQ=0.7816;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90254263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9998;RSQ=0.9901;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90254276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7037;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0008;AC=1536;AN=2184 GT:DS:GL:BD 0.70329672 1
1 90254411 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7032;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0005;THETA=0.0005;AC=1536;AN=2184 GT:DS:GL:BD 0.70329672 1
1 90254619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90254631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4693;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90254791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7797;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90254921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0073;AVGPOST=0.9960;RSQ=0.7894;ERATE=0.0008;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90254973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.934;LDAF=0.5987;AVGPOST=0.9468;RSQ=0.9214;ERATE=0.0195;THETA=0.0016;AC=1326;AN=2184 GT:DS:GL:BD 0.60714287 1
1 90255067 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8957;ERATE=0.0012;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90255107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90255151 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0077;AVGPOST=0.9983;RSQ=0.9266;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90255215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90255240 . CT C 953 PASS INDEL;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0140;AVGPOST=0.9960;RSQ=0.8817;ERATE=0.0005;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90255244 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6776;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90255433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1327;AVGPOST=0.9982;RSQ=0.9945;ERATE=0.0003;THETA=0.0006;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 90255456 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90255488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90255519 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90255600 . CTT C 1020 PASS INDEL;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0082;AVGPOST=0.9988;RSQ=0.9369;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90255605 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90255826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90255867 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90255880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6045;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90255891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4576;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90255910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7662;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90256053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0078;AVGPOST=0.9991;RSQ=0.9537;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90256113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6885;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=1503;AN=2184 GT:DS:GL:BD 0.68818682 1
1 90256122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9712;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90256440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8773;ERATE=0.0003;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90256485 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1332;AVGPOST=0.9982;RSQ=0.9944;ERATE=0.0004;THETA=0.0003;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 90256489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90256617 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6169;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90256653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3766;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90256793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6343;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90256854 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90256909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9859;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90257041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6902;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0004;THETA=0.0005;AC=1507;AN=2184 GT:DS:GL:BD 0.69001830 1
1 90257256 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90257279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9673;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90257301 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7939;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90257330 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6902;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0004;THETA=0.0003;AC=1507;AN=2184 GT:DS:GL:BD 0.69001830 1
1 90257346 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90257384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0116;AVGPOST=0.9971;RSQ=0.9014;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90257460 . TA T 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4054;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90257585 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7004;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90257605 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90257817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7507;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90257890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90257911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7720;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90258002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2126;AVGPOST=0.9946;RSQ=0.9870;ERATE=0.0006;THETA=0.0005;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 90258013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90258131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7608;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90258147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90258177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7007;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0005;THETA=0.0003;AC=1531;AN=2184 GT:DS:GL:BD 0.70100731 1
1 90258219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90258385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90258453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6902;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=1507;AN=2184 GT:DS:GL:BD 0.69001830 1
1 90258587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0048;AVGPOST=0.9979;RSQ=0.8308;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90258672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4928;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90258711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9698;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90258821 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.918;LDAF=0.6745;AVGPOST=0.9335;RSQ=0.8981;ERATE=0.0133;THETA=0.0002;AC=1513;AN=2184 GT:DS:GL:BD 0.69276559 1
1 90258928 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.768;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.8061;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90258928 . AAT A 37401 PASS INDEL;BAVGPOST=0.993;BRSQ=0.924;LDAF=0.9515;AVGPOST=0.9722;RSQ=0.7721;ERATE=0.0056;THETA=0.0004;AC=2098;AN=2184 GT:DS:GL:BD 0.96062273 1
1 90258930 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.918;LDAF=0.0479;AVGPOST=0.9824;RSQ=0.8744;ERATE=0.0024;THETA=0.0021;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 90259062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90259087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6900;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0004;THETA=0.0002;AC=1507;AN=2184 GT:DS:GL:BD 0.69001830 1
1 90259150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0080;AVGPOST=0.9962;RSQ=0.8272;ERATE=0.0006;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90259286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6897;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0007;AC=1507;AN=2184 GT:DS:GL:BD 0.69001830 1
1 90259306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.808;LDAF=0.0441;AVGPOST=0.9772;RSQ=0.7949;ERATE=0.0061;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 90259317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6640;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90259355 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0145;AVGPOST=0.9990;RSQ=0.9697;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90259555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2818;AVGPOST=0.9966;RSQ=0.9936;ERATE=0.0007;THETA=0.0005;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 90259927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0149;AVGPOST=0.9984;RSQ=0.9676;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90260019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9587;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90260093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90260133 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6683;AVGPOST=0.9971;RSQ=0.9955;ERATE=0.0006;THETA=0.0005;AC=1458;AN=2184 GT:DS:GL:BD 0.66758239 1
1 90260235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6679;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=1458;AN=2184 GT:DS:GL:BD 0.66758239 1
1 90260278 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.973;LDAF=0.2426;AVGPOST=0.9934;RSQ=0.9875;ERATE=0.0007;THETA=0.0005;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 90260322 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9617;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90260355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90260438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90260474 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4244;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90260591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7597;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90260601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5502;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90260613 . AG A 142 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8763;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90260653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9455;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90260695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.8008;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90260737 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0003;THETA=0.0044;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90260769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0229;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 90260788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4452;AVGPOST=0.9963;RSQ=0.9940;ERATE=0.0005;THETA=0.0003;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 90260955 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5149;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90261087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5980;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90261193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0448;AVGPOST=0.9982;RSQ=0.9856;ERATE=0.0005;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 90261469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.904;LDAF=0.0148;AVGPOST=0.9946;RSQ=0.8523;ERATE=0.0006;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90261516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.6558;AVGPOST=0.9766;RSQ=0.9650;ERATE=0.0032;THETA=0.0004;AC=1435;AN=2184 GT:DS:GL:BD 0.65705127 1
1 90261717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7147;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90261832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7434;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90261838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9971;RSQ=0.8605;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90262043 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6959;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90262075 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90262361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7197;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90262419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90262478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5797;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90262548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9997;RSQ=0.9796;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90262687 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0214;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90262749 rs72079320 AAT A 165 PASS INDEL;BAVGPOST=0.962;BRSQ=0.315;LDAF=0.0883;AVGPOST=0.8758;RSQ=0.3939;ERATE=0.0138;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 90263483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.860;BRSQ=0.133;LDAF=0.1819;AVGPOST=0.7471;RSQ=0.3016;ERATE=0.0197;THETA=0.0002;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 90263518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.918;BRSQ=0.198;LDAF=0.1219;AVGPOST=0.8338;RSQ=0.3830;ERATE=0.0110;THETA=0.0006;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 90263537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.244;LDAF=0.0831;AVGPOST=0.8848;RSQ=0.3988;ERATE=0.0115;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 90263577 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.574;BRSQ=0.189;LDAF=0.2804;AVGPOST=0.6616;RSQ=0.3064;ERATE=0.0388;THETA=0.0003;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 90263589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.879;BRSQ=0.095;LDAF=0.1807;AVGPOST=0.7452;RSQ=0.2995;ERATE=0.0183;THETA=0.0012;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 90263598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.817;BRSQ=0.086;LDAF=0.1725;AVGPOST=0.7830;RSQ=0.4028;ERATE=0.0143;THETA=0.0005;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 90263612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.862;BRSQ=0.144;LDAF=0.1884;AVGPOST=0.7299;RSQ=0.2946;ERATE=0.0223;THETA=0.0007;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 90263617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.161;LDAF=0.0914;AVGPOST=0.8665;RSQ=0.3766;ERATE=0.0080;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 90263622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.691;BRSQ=0.306;LDAF=0.2944;AVGPOST=0.7014;RSQ=0.4116;ERATE=0.0336;THETA=0.0004;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 90263629 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.799;LDAF=0.0236;AVGPOST=0.9772;RSQ=0.6522;ERATE=0.0012;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90263699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.318;LDAF=0.0109;AVGPOST=0.9875;RSQ=0.5366;ERATE=0.0009;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90263714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.809;BRSQ=0.684;LDAF=0.5644;AVGPOST=0.7744;RSQ=0.6510;ERATE=0.0300;THETA=0.0002;AC=1333;AN=2184 GT:DS:GL:BD 0.61034799 1
1 90263734 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.888;BRSQ=0.685;LDAF=0.1907;AVGPOST=0.9477;RSQ=0.8714;ERATE=0.0019;THETA=0.0004;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 90263780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.640;LDAF=0.0120;AVGPOST=0.9913;RSQ=0.7071;ERATE=0.0007;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90263781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.904;BRSQ=0.827;LDAF=0.5980;AVGPOST=0.8697;RSQ=0.8040;ERATE=0.0155;THETA=0.0005;AC=1349;AN=2184 GT:DS:GL:BD 0.61767399 1
1 90263790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.526;LDAF=0.0088;AVGPOST=0.9939;RSQ=0.7119;ERATE=0.0005;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90263821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0059;AVGPOST=0.9976;RSQ=0.8345;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90263822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6541;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90263856 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90264055 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.506;LDAF=0.0023;AVGPOST=0.9969;RSQ=0.4404;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90264160 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.803;LDAF=0.0126;AVGPOST=0.9921;RSQ=0.7749;ERATE=0.0014;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90264317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0107;AVGPOST=0.9997;RSQ=0.9859;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90264354 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90264465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6671;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 90264475 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90264486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0025;AVGPOST=0.9966;RSQ=0.4715;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90264530 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9885;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90264689 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6668;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 90264692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6846;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90264731 . T TC 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6269;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90264839 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90264844 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90264893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1287;AVGPOST=0.9991;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 90264984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90265039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6662;AVGPOST=0.9978;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 90265054 . GCA G 429 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8944;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90265153 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6658;AVGPOST=0.9977;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=1454;AN=2184 GT:DS:GL:BD 0.66575092 1
1 90265169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90265175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90265247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90265279 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4451;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 90265332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90265342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90265370 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8539;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90265407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6669;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 90265414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6667;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=1455;AN=2184 GT:DS:GL:BD 0.66620880 1
1 90265498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8331;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90265515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90265516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9390;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90265535 . C CT 858 PASS INDEL;BAVGPOST=0.996;BRSQ=0.812;LDAF=0.0128;AVGPOST=0.9984;RSQ=0.9472;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90265573 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90265840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7525;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90265954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90265971 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4452;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 90266028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90266124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7422;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90266251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8456;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90266312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.9085;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90266333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5970;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90266367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90266391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90266401 . A AT 199 PASS INDEL;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6991;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90266436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7102;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0005;THETA=0.0006;AC=1552;AN=2184 GT:DS:GL:BD 0.71062273 1
1 90266446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0059;AVGPOST=0.9987;RSQ=0.9108;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90266453 . GGTTTT G 250 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0055;AVGPOST=0.9970;RSQ=0.7875;ERATE=0.0008;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90266479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7590;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90266531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5381;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90266570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9589;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90266614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4441;AVGPOST=0.9974;RSQ=0.9957;ERATE=0.0005;THETA=0.0005;AC=969;AN=2184 GT:DS:GL:BD 0.44368133 0
1 90266633 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.872;LDAF=0.0178;AVGPOST=0.9956;RSQ=0.9119;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 90266701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.6612;AVGPOST=0.9868;RSQ=0.9799;ERATE=0.0025;THETA=0.0003;AC=1447;AN=2184 GT:DS:GL:BD 0.66254580 1
1 90266704 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3873;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90266757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7875;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90266802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90266804 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90266911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6682;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=1458;AN=2184 GT:DS:GL:BD 0.66758239 1
1 90266925 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7002;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=1529;AN=2184 GT:DS:GL:BD 0.70009160 1
1 90267088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8567;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90267089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.896;LDAF=0.0205;AVGPOST=0.9961;RSQ=0.9296;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 90267116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6677;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0004;THETA=0.0004;AC=1458;AN=2184 GT:DS:GL:BD 0.66758239 1
1 90267166 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90267185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0054;AVGPOST=0.9966;RSQ=0.7661;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90267218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90267370 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90267513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6677;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0006;THETA=0.0003;AC=1458;AN=2184 GT:DS:GL:BD 0.66758239 1
1 90267521 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.600;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8310;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90267607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90267687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90267692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6597;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0005;THETA=0.0003;AC=1441;AN=2184 GT:DS:GL:BD 0.65979856 1
1 90267739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90267788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.6939;ERATE=0.0011;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90267855 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4989;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90267929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.7009;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90267971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90267979 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1335;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 90268038 . CAG C 772 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9982;RSQ=0.9065;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90268189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6617;AVGPOST=0.9975;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=1444;AN=2184 GT:DS:GL:BD 0.66117215 1
1 90268287 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90268292 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4453;AVGPOST=0.9968;RSQ=0.9947;ERATE=0.0006;THETA=0.0004;AC=973;AN=2184 GT:DS:GL:BD 0.44551283 0
1 90268299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0026;AVGPOST=0.9959;RSQ=0.4140;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90268315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.882;LDAF=0.0164;AVGPOST=0.9955;RSQ=0.8818;ERATE=0.0008;THETA=0.0025;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90268432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6268;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90268469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0219;AVGPOST=0.9975;RSQ=0.9525;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90268559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0051;AVGPOST=0.9986;RSQ=0.8960;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90268583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0126;AVGPOST=0.9985;RSQ=0.9543;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90268584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90268632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0078;AVGPOST=0.9989;RSQ=0.9477;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90268723 . A AC 264 PASS INDEL;BAVGPOST=0.997;BRSQ=0.678;LDAF=0.0040;AVGPOST=0.9969;RSQ=0.6711;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90268846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6180;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90268876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7098;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90268985 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.6577;AVGPOST=0.9959;RSQ=0.9935;ERATE=0.0006;THETA=0.0006;AC=1437;AN=2184 GT:DS:GL:BD 0.65796703 1
1 90268990 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7070;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90268992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.6580;AVGPOST=0.9971;RSQ=0.9952;ERATE=0.0008;THETA=0.0013;AC=1437;AN=2184 GT:DS:GL:BD 0.65796703 1
1 90269272 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2143;AVGPOST=0.9983;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 90269347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.6494;AVGPOST=0.9816;RSQ=0.9727;ERATE=0.0038;THETA=0.0003;AC=1422;AN=2184 GT:DS:GL:BD 0.65109891 1
1 90269517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6727;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90269579 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90269678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.3925;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90269684 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.677;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7742;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90269733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7607;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90269882 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9997;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90269939 . T TC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5660;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90269996 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9829;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90270146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6595;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=1440;AN=2184 GT:DS:GL:BD 0.65934068 1
1 90270213 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9352;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90270295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7969;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90270334 . G GTGTC 440 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6474;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90270348 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0097;AVGPOST=0.9993;RSQ=0.9724;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90270404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.6584;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=1438;AN=2184 GT:DS:GL:BD 0.65842491 1
1 90270409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0069;AVGPOST=0.9993;RSQ=0.9527;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90270411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9748;ERATE=0.0003;THETA=0.0038;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90270478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0141;AVGPOST=0.9995;RSQ=0.9838;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90270502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7159;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90270590 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0150;AVGPOST=0.9985;RSQ=0.9587;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90270622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90270663 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5036;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90270732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1858;AVGPOST=0.9972;RSQ=0.9922;ERATE=0.0004;THETA=0.0004;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 90270735 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90270811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5951;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90270846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4444;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0007;THETA=0.0003;AC=969;AN=2184 GT:DS:GL:BD 0.44368133 0
1 90270903 . A AAAAT 4749 PASS INDEL;BAVGPOST=0.984;BRSQ=0.768;LDAF=0.0369;AVGPOST=0.9931;RSQ=0.9325;ERATE=0.0006;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 90270924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4497;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90270942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0526;AVGPOST=0.9991;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 90271048 . CCT C 2366 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0513;AVGPOST=0.9983;RSQ=0.9870;ERATE=0.0006;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 90271049 . CTCT C 11998 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0522;AVGPOST=0.9983;RSQ=0.9883;ERATE=0.0005;THETA=0.0003;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 90271110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90271111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6649;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90271452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5229;ERATE=0.0008;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90271497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0148;AVGPOST=0.9995;RSQ=0.9847;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90271539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0160;AVGPOST=0.9997;RSQ=0.9922;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90271578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90271586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1383;AVGPOST=0.9984;RSQ=0.9952;ERATE=0.0003;THETA=0.0011;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 90271722 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0353;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 90271771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90271868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.930;LDAF=0.3547;AVGPOST=0.9558;RSQ=0.8944;ERATE=0.0551;THETA=0.0004;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 90271985 . AAG A 53 PASS INDEL;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6632;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90271990 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9271;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90272052 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90272178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7230;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90272309 rs11281367 T TTTAACTA 102792 PASS INDEL;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.5149;AVGPOST=0.9778;RSQ=0.9659;ERATE=0.0044;THETA=0.0002;AC=1129;AN=2184 GT:DS:GL:BD 0.51694137 1
1 90272335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2079;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 90272372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2076;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0005;THETA=0.0004;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 90272432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7357;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90272437 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6960;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90272625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5915;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90272632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2074;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0004;THETA=0.0006;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 90272648 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0141;AVGPOST=0.9997;RSQ=0.9908;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90272651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90272763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7660;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90272770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0109;AVGPOST=0.9992;RSQ=0.9679;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90272773 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0174;AVGPOST=0.9994;RSQ=0.9839;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 90272932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0060;AVGPOST=0.9957;RSQ=0.7118;ERATE=0.0006;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90272939 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2095;AVGPOST=0.9957;RSQ=0.9905;ERATE=0.0016;THETA=0.0003;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 90272970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2689;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=589;AN=2184 GT:DS:GL:BD 0.26968864 0
1 90273189 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90273238 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2087;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0005;THETA=0.0005;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 90273305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90273368 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90273406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2078;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0005;THETA=0.0007;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 90273428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9169;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90273432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8868;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90273455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4498;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90273523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90273584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7106;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90273641 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90273833 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7014;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90273877 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90274081 . TTA T 74 PASS INDEL;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5300;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90274249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8005;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90274258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90274260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90274288 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90274495 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2194;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0004;THETA=0.0025;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 90274559 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90274586 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90274799 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90274804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9992;RSQ=0.9751;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90275051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90275106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6814;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90275135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90275390 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9712;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90275414 . GTATGAATGA G 1121 PASS INDEL;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0048;AVGPOST=0.9980;RSQ=0.8336;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90275664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9082;ERATE=0.0003;THETA=0.0019;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90275720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90275731 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90275940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9483;ERATE=0.0003;THETA=0.0064;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90276151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0109;AVGPOST=0.9989;RSQ=0.9584;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90276343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7627;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90276360 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2153;AVGPOST=0.9972;RSQ=0.9934;ERATE=0.0005;THETA=0.0007;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 90276390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.586;LDAF=0.0066;AVGPOST=0.9933;RSQ=0.6008;ERATE=0.0012;THETA=0.0035;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90276473 . GT G 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5003;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90276479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4969;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90276484 . T TA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5349;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90276687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0106;AVGPOST=0.9992;RSQ=0.9702;ERATE=0.0006;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90276726 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0109;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90276825 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8731;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90276850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90276853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6836;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90276863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9870;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90277001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90277017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5877;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90277063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.6111;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90277228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2213;AVGPOST=0.9966;RSQ=0.9931;ERATE=0.0008;THETA=0.0003;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 90277229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90277328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9519;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90277375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90277501 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90277646 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90277709 . GGGA G 2039 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0111;AVGPOST=0.9989;RSQ=0.9567;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90277770 . TGTATGA T 189 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3721;ERATE=0.0007;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90277814 . T TTA 8132 PASS INDEL;BAVGPOST=0.990;BRSQ=0.976;LDAF=0.2065;AVGPOST=0.9859;RSQ=0.9714;ERATE=0.0005;THETA=0.0011;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 90277819 rs35934393 T TAG 39128 PASS INDEL;BAVGPOST=0.990;BRSQ=0.975;LDAF=0.2100;AVGPOST=0.9855;RSQ=0.9717;ERATE=0.0004;THETA=0.0009;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 90277821 . G GAA 8584 PASS INDEL;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.2042;AVGPOST=0.9884;RSQ=0.9759;ERATE=0.0003;THETA=0.0005;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 90277823 . G GAA 13536 PASS INDEL;BAVGPOST=0.991;BRSQ=0.976;LDAF=0.2028;AVGPOST=0.9872;RSQ=0.9726;ERATE=0.0005;THETA=0.0003;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 90277887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7864;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90278029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6134;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90278180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8746;ERATE=0.0010;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90278211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9348;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90278292 . CTT C 85 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5244;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90278297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7039;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90278455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2220;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 90278555 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90278625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90278842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5209;AVGPOST=0.9952;RSQ=0.9923;ERATE=0.0005;THETA=0.0006;AC=1139;AN=2184 GT:DS:GL:BD 0.52152014 1
1 90278992 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0050;AVGPOST=0.9983;RSQ=0.9016;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90279094 . AAAT A 1711 PASS INDEL;BAVGPOST=0.995;BRSQ=0.811;LDAF=0.0150;AVGPOST=0.9947;RSQ=0.8756;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90279126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2221;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 90279238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0926;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90279286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8283;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90279298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.542;LDAF=0.0050;AVGPOST=0.9931;RSQ=0.4632;ERATE=0.0008;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90279326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7280;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90279350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0072;AVGPOST=0.9991;RSQ=0.9393;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90279358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0073;AVGPOST=0.9942;RSQ=0.6695;ERATE=0.0008;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90279452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0056;AVGPOST=0.9943;RSQ=0.6291;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90279484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0031;AVGPOST=0.9969;RSQ=0.5934;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90279541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8731;ERATE=0.0005;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90279597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.9019;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90279627 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2221;AVGPOST=0.9977;RSQ=0.9950;ERATE=0.0005;THETA=0.0005;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 90279718 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4782;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90279756 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90279900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0243;AVGPOST=0.9988;RSQ=0.9792;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 90279938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90280040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9270;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90280156 . GGGCAAA G 235 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7973;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90280171 . A ACAAT 57 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5536;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90280203 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90280222 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8852;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90280275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9991;RSQ=0.9569;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90280296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6933;AVGPOST=0.9966;RSQ=0.9937;ERATE=0.0005;THETA=0.0002;AC=1515;AN=2184 GT:DS:GL:BD 0.69368130 1
1 90280307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0473;AVGPOST=0.9981;RSQ=0.9827;ERATE=0.0004;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 90280325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90280342 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5429;AVGPOST=0.9983;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=1187;AN=2184 GT:DS:GL:BD 0.54349816 1
1 90280347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8399;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90280353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1105;AVGPOST=0.9979;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 90280669 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90280758 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90280766 . AG A 4524 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1939;AVGPOST=0.9954;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 90280768 rs10706779 GT G 31173 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1933;AVGPOST=0.9965;RSQ=0.9912;ERATE=0.0006;THETA=0.0005;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 90280866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90281115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2957;AVGPOST=0.9977;RSQ=0.9958;ERATE=0.0005;THETA=0.0002;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 90281199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5413;AVGPOST=0.9969;RSQ=0.9952;ERATE=0.0006;THETA=0.0003;AC=1185;AN=2184 GT:DS:GL:BD 0.54258239 1
1 90281283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90281399 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8774;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90281401 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90281422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.516;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6204;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90281429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90281599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5216;AVGPOST=0.9972;RSQ=0.9957;ERATE=0.0005;THETA=0.0004;AC=1138;AN=2184 GT:DS:GL:BD 0.52106225 1
1 90281648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7400;ERATE=0.0009;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90281652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9351;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90281732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7591;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90281804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90281928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5687;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90282195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2239;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 90282218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6389;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90282311 . AT A 354 PASS INDEL;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8071;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90282317 . AC A 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3661;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90282342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7980;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90282382 rs112014894 G GCCCCT 86470 PASS INDEL;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5187;AVGPOST=0.9934;RSQ=0.9891;ERATE=0.0010;THETA=0.0003;AC=1137;AN=2184 GT:DS:GL:BD 0.52060437 1
1 90282454 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6780;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90282610 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6455;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90282710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8306;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90282818 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7762;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90282939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90282959 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90282960 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90283068 rs57943519 T TAAG 46674 PASS INDEL;BAVGPOST=0.968;BRSQ=0.945;LDAF=0.5060;AVGPOST=0.9564;RSQ=0.9339;ERATE=0.0115;THETA=0.0003;AC=1113;AN=2184 GT:DS:GL:BD 0.50961536 1
1 90283179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90283190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8195;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90283321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1442;AVGPOST=0.9991;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 90283344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9087;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90283349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7185;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90283433 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6131;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90283462 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9997;RSQ=0.9738;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90283487 rs71763681 TGAGA T 29413 PASS INDEL;BAVGPOST=0.967;BRSQ=0.935;LDAF=0.2593;AVGPOST=0.9802;RSQ=0.9659;ERATE=0.0010;THETA=0.0003;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 90283492 . GAGA G 7112 PASS INDEL;BAVGPOST=0.967;BRSQ=0.935;LDAF=0.2570;AVGPOST=0.9794;RSQ=0.9639;ERATE=0.0005;THETA=0.0002;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 90283515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2239;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0006;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 90283617 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5335;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90283618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7531;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90283626 . TA T 13633 PASS INDEL;BAVGPOST=0.980;BRSQ=0.957;LDAF=0.2335;AVGPOST=0.9865;RSQ=0.9727;ERATE=0.0019;THETA=0.0002;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 90283684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.2922;AVGPOST=0.9958;RSQ=0.9923;ERATE=0.0008;THETA=0.0005;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 90284250 . C CT 18 PASS INDEL;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0079;AVGPOST=0.9899;RSQ=0.4901;ERATE=0.0014;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90284331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0085;AVGPOST=0.9983;RSQ=0.9285;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90284540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90284628 . TGTGA T 196 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0038;AVGPOST=0.9984;RSQ=0.8263;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90284630 rs34468087 T TGA 86754 PASS INDEL;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6923;AVGPOST=0.9925;RSQ=0.9853;ERATE=0.0016;THETA=0.0004;AC=1514;AN=2184 GT:DS:GL:BD 0.69322342 1
1 90284686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90284705 . AATC A 712 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8884;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90284752 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9519;ERATE=0.0004;THETA=0.0028;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90284787 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0088;AVGPOST=0.9977;RSQ=0.8983;ERATE=0.0008;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90284827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0042;AVGPOST=0.9981;RSQ=0.8146;ERATE=0.0005;THETA=0.0025;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90284868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0117;AVGPOST=0.9962;RSQ=0.8949;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90284870 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0101;AVGPOST=0.9981;RSQ=0.9249;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90284899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0044;AVGPOST=0.9968;RSQ=0.7342;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90284902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9067;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90284971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7958;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90284988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90285059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0148;AVGPOST=0.9977;RSQ=0.9440;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90285132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4566;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90285134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90285137 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.540;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6897;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90285156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0084;AVGPOST=0.9970;RSQ=0.8632;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90285190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1441;AVGPOST=0.9984;RSQ=0.9938;ERATE=0.0003;THETA=0.0010;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 90285333 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.8017;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90285358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0086;AVGPOST=0.9980;RSQ=0.9030;ERATE=0.0007;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90285474 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1319;AVGPOST=0.9982;RSQ=0.9941;ERATE=0.0003;THETA=0.0011;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 90285484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0162;AVGPOST=0.9989;RSQ=0.9712;ERATE=0.0003;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90285650 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90285721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90285785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90285820 . C CA 4955 PASS INDEL;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0540;AVGPOST=0.9959;RSQ=0.9704;ERATE=0.0004;THETA=0.0006;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 90285863 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0061;AVGPOST=0.9971;RSQ=0.8125;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90285895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0138;AVGPOST=0.9989;RSQ=0.9622;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90285981 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0037;AVGPOST=0.9955;RSQ=0.5905;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90285990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9995;RSQ=0.9776;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90286113 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4378;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90286120 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.553;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4295;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90286123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90286150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.6818;ERATE=0.0010;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90286193 . C CGG 559 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8441;ERATE=0.0004;THETA=0.0024;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90286286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9644;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90286345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5539;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90286381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0111;AVGPOST=0.9977;RSQ=0.9167;ERATE=0.0005;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90286419 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0062;AVGPOST=0.9981;RSQ=0.8759;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90286422 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0050;AVGPOST=0.9981;RSQ=0.8246;ERATE=0.0007;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90286438 . CT C 75 PASS INDEL;BAVGPOST=0.997;BRSQ=0.485;LDAF=0.0069;AVGPOST=0.9920;RSQ=0.5590;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90286636 rs5776027 TGCTGCC T 10502 PASS INDEL;BAVGPOST=0.939;BRSQ=0.222;LDAF=0.9514;AVGPOST=0.9427;RSQ=0.5201;ERATE=0.0018;THETA=0.0004;AC=2108;AN=2184 GT:DS:GL:BD 0.96520144 1
1 90286889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.699;LDAF=0.0277;AVGPOST=0.9766;RSQ=0.6372;ERATE=0.0024;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 90286925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.259;LDAF=0.0388;AVGPOST=0.9410;RSQ=0.3858;ERATE=0.0040;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 90287007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0168;AVGPOST=0.9886;RSQ=0.7145;ERATE=0.0015;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90287140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.558;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3216;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90287168 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.815;LDAF=0.0040;AVGPOST=0.9952;RSQ=0.4891;ERATE=0.0008;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90287458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0133;AVGPOST=0.9956;RSQ=0.8619;ERATE=0.0006;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90287591 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.745;LDAF=0.0051;AVGPOST=0.9955;RSQ=0.6572;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90287606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9361;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90287629 . TCTC T 32 PASS INDEL;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4245;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90287642 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3242;AVGPOST=0.9914;RSQ=0.9861;ERATE=0.0005;THETA=0.0033;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 90288001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0075;AVGPOST=0.9988;RSQ=0.9430;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90288087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7895;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90288215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0122;AVGPOST=0.9982;RSQ=0.9393;ERATE=0.0004;THETA=0.0051;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90288301 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8621;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90288534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90288570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90288620 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8099;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90288644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90288697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5681;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90288877 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7315;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90288905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1357;AVGPOST=0.9936;RSQ=0.9777;ERATE=0.0005;THETA=0.0003;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 90289037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9755;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90289084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90289209 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8632;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90289270 . TAAC T 79 PASS INDEL;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4986;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90289485 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0126;AVGPOST=0.9994;RSQ=0.9864;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90289520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8704;ERATE=0.0003;THETA=0.0039;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90289580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0064;AVGPOST=0.9986;RSQ=0.9149;ERATE=0.0004;THETA=0.0034;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90289635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5656;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90289657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.9173;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90289664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0047;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90289704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90289816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0068;AVGPOST=0.9997;RSQ=0.9775;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90289845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9690;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90289861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0469;AVGPOST=0.9978;RSQ=0.9779;ERATE=0.0004;THETA=0.0012;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 90289869 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9842;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90289928 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90289977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8414;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90290036 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7575;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90290040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9727;ERATE=0.0004;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90290198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90290291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90290308 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8214;ERATE=0.0003;THETA=0.0042;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90290601 . TTTG T 27 PASS INDEL;BAVGPOST=0.995;BRSQ=0.695;LDAF=0.0113;AVGPOST=0.9866;RSQ=0.5645;ERATE=0.0023;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90290667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90290674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7079;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90290759 . T TG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0032;AVGPOST=0.9952;RSQ=0.5100;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90290829 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0119;AVGPOST=0.9981;RSQ=0.9426;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90290830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0093;AVGPOST=0.9985;RSQ=0.9408;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90290924 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0091;AVGPOST=0.9993;RSQ=0.9708;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90291017 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5507;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90291144 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0092;AVGPOST=0.9989;RSQ=0.9516;ERATE=0.0005;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90291167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90291240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9500;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90291251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90291279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90291293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7209;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90291316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8102;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90291335 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9805;ERATE=0.0004;THETA=0.0022;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90291497 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2641;AVGPOST=0.9961;RSQ=0.9929;ERATE=0.0004;THETA=0.0007;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 90291508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90291528 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8458;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90291549 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7701;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90291725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9540;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90291745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6083;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90291758 . C CACTTTGA 358 PASS INDEL;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7708;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90291964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0176;AVGPOST=0.9955;RSQ=0.8946;ERATE=0.0007;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90291977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.943;LDAF=0.3761;AVGPOST=0.9531;RSQ=0.9247;ERATE=0.0015;THETA=0.0008;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 90291983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.912;LDAF=0.6517;AVGPOST=0.9355;RSQ=0.9016;ERATE=0.0109;THETA=0.0014;AC=1452;AN=2184 GT:DS:GL:BD 0.66483516 1
1 90292072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.562;LDAF=0.0076;AVGPOST=0.9916;RSQ=0.5366;ERATE=0.0011;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90292133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6305;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90292165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6916;AVGPOST=0.9957;RSQ=0.9923;ERATE=0.0022;THETA=0.0004;AC=1511;AN=2184 GT:DS:GL:BD 0.69184983 1
1 90292401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90292635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90292641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6368;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90292708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0036;AVGPOST=0.9971;RSQ=0.6937;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90292783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0058;AVGPOST=0.9979;RSQ=0.8296;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90292804 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9639;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90292836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0043;AVGPOST=0.9976;RSQ=0.8111;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90292876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.633;LDAF=0.0086;AVGPOST=0.9927;RSQ=0.7212;ERATE=0.0011;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90292954 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6962;AVGPOST=0.9971;RSQ=0.9944;ERATE=0.0005;THETA=0.0032;AC=1519;AN=2184 GT:DS:GL:BD 0.69551283 1
1 90293018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7164;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90293054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90293117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9201;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90293121 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9650;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90293356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90293518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6007;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90293657 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90294002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8953;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90294013 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8936;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90294080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9135;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90294191 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8880;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90294222 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9662;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90294280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8613;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90294329 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0084;AVGPOST=0.9994;RSQ=0.9715;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90294352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5240;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90294387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90294426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8610;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90294456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9882;AVGPOST=0.9993;RSQ=0.9740;ERATE=0.0003;THETA=0.0008;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 90294516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6579;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90294538 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9506;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90294689 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0171;AVGPOST=0.9982;RSQ=0.9590;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90294695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90294827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1307;AVGPOST=0.9958;RSQ=0.9868;ERATE=0.0006;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 90294878 . CT C 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5825;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90294881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90294913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5970;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90295037 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6314;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90295163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90295254 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0375;AVGPOST=0.9976;RSQ=0.9743;ERATE=0.0003;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 90295317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.876;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9734;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90295581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1307;AVGPOST=0.9972;RSQ=0.9907;ERATE=0.0005;THETA=0.0008;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 90295702 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0097;AVGPOST=0.9986;RSQ=0.9453;ERATE=0.0003;THETA=0.0043;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90295747 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4507;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90295830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7767;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90295885 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.9576;AVGPOST=0.9972;RSQ=0.9756;ERATE=0.0006;THETA=0.0024;AC=2093;AN=2184 GT:DS:GL:BD 0.95833331 1
1 90295889 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.7172;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90295920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90295990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9682;ERATE=0.0003;THETA=0.0083;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90296041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0130;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90296550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.495;LDAF=0.0044;AVGPOST=0.9933;RSQ=0.3698;ERATE=0.0009;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90296557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.887;LDAF=0.0263;AVGPOST=0.9919;RSQ=0.8729;ERATE=0.0007;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 90296579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.645;LDAF=0.0137;AVGPOST=0.9855;RSQ=0.5988;ERATE=0.0012;THETA=0.0015;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90296646 . GGA G 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0040;AVGPOST=0.9986;RSQ=0.8568;ERATE=0.0004;THETA=0.0043;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90296657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9027;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90296661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6429;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90296784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.3765;AVGPOST=0.9930;RSQ=0.9913;ERATE=0.0003;THETA=0.0009;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 90296863 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.9881;AVGPOST=0.9986;RSQ=0.9573;ERATE=0.0003;THETA=0.0009;AC=2159;AN=2184 GT:DS:GL:BD 0.98855311 1
1 90296955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8666;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90297061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6578;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90297068 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6387;ERATE=0.0004;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90297096 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.9507;AVGPOST=0.9984;RSQ=0.9891;ERATE=0.0005;THETA=0.0009;AC=2076;AN=2184 GT:DS:GL:BD 0.95054942 1
1 90297258 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9590;ERATE=0.0005;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90297403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90297437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0140;AVGPOST=0.9991;RSQ=0.9737;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90297448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90297505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.2883;ERATE=0.0003;THETA=0.0015;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90297585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.889;LDAF=0.0134;AVGPOST=0.9975;RSQ=0.9201;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90297586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6830;ERATE=0.0004;THETA=0.0058;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90297637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8824;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90297680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90297719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9628;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90297855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.888;LDAF=0.0210;AVGPOST=0.9945;RSQ=0.9082;ERATE=0.0004;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 90297911 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90297929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6097;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90297985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90298039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0035;AVGPOST=0.9969;RSQ=0.6923;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90298043 . T TG 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6340;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90298161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7070;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90298239 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90298255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.9794;AVGPOST=0.9980;RSQ=0.9611;ERATE=0.0006;THETA=0.0008;AC=2141;AN=2184 GT:DS:GL:BD 0.98031133 1
1 90298270 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6070;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90298305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.3700;AVGPOST=0.9892;RSQ=0.9866;ERATE=0.0009;THETA=0.0022;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 90298408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0066;AVGPOST=0.9986;RSQ=0.9204;ERATE=0.0003;THETA=0.0027;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90298418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9502;ERATE=0.0003;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90298469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9933;ERATE=0.0003;THETA=0.0026;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90298526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0124;AVGPOST=0.9990;RSQ=0.9679;ERATE=0.0003;THETA=0.0051;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90298703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0056;AVGPOST=0.9994;RSQ=0.9482;ERATE=0.0004;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90298746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9407;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90298864 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90298880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90298894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6406;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90299062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.922;LDAF=0.0301;AVGPOST=0.9957;RSQ=0.9431;ERATE=0.0004;THETA=0.0017;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 90299193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9665;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90299289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90299296 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.8029;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90299415 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9067;ERATE=0.0003;THETA=0.0038;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90299572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6042;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90299592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5665;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90299693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7055;ERATE=0.0005;THETA=0.0044;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90299740 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0098;AVGPOST=0.9991;RSQ=0.9681;ERATE=0.0003;THETA=0.0015;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90299863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9833;ERATE=0.0003;THETA=0.0023;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90299895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6058;ERATE=0.0010;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90299899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9809;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90299901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90300055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9802;AVGPOST=0.9995;RSQ=0.9901;ERATE=0.0004;THETA=0.0011;AC=2141;AN=2184 GT:DS:GL:BD 0.98031133 1
1 90300114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9657;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90300219 . A AT 25 PASS INDEL;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.7946;ERATE=0.0003;THETA=0.0033;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90300282 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9182;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90300362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8191;ERATE=0.0005;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90300364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0100;AVGPOST=0.9992;RSQ=0.9665;ERATE=0.0012;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90300382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0100;AVGPOST=0.9985;RSQ=0.9392;ERATE=0.0004;THETA=0.0053;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90300440 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7060;ERATE=0.0003;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90300612 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5673;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90300632 rs111388157 GCA G 116849 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9700;AVGPOST=0.9984;RSQ=0.9819;ERATE=0.0004;THETA=0.0124;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 90300707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6314;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90300795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9129;ERATE=0.0003;THETA=0.0046;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90300821 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.665;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90300873 . A AT 1133 PASS INDEL;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0082;AVGPOST=0.9972;RSQ=0.8515;ERATE=0.0017;THETA=0.0053;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90300883 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9768;ERATE=0.0003;THETA=0.0088;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90300918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0004;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90300956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8188;ERATE=0.0018;THETA=0.0069;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90300986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90301031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0046;AVGPOST=0.9975;RSQ=0.8191;ERATE=0.0006;THETA=0.0070;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90301068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90301198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9580;ERATE=0.0004;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90301385 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90301401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.9765;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0003;THETA=0.0020;AC=2133;AN=2184 GT:DS:GL:BD 0.97664833 1
1 90301430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9765;AVGPOST=0.9995;RSQ=0.9921;ERATE=0.0003;THETA=0.0085;AC=2133;AN=2184 GT:DS:GL:BD 0.97664833 1
1 90301607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90301734 rs72210642 A AT 294 PASS INDEL;BAVGPOST=0.992;BRSQ=0.698;LDAF=0.0239;AVGPOST=0.9762;RSQ=0.5989;ERATE=0.0054;THETA=0.0036;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 90301806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8729;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90302027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1277;AVGPOST=0.9940;RSQ=0.9802;ERATE=0.0004;THETA=0.0011;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 90302034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90302138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90302422 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90302452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0062;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90302481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6827;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90302553 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6833;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90302618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0397;AVGPOST=0.9992;RSQ=0.9919;ERATE=0.0003;THETA=0.0009;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 90302744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6669;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90302780 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5183;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90302822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90302825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.956;LDAF=0.1198;AVGPOST=0.9909;RSQ=0.9701;ERATE=0.0004;THETA=0.0006;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 90302932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9687;AVGPOST=0.9989;RSQ=0.9876;ERATE=0.0003;THETA=0.0010;AC=2115;AN=2184 GT:DS:GL:BD 0.96840662 1
1 90302984 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8971;ERATE=0.0003;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90303079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6663;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90303146 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9760;AVGPOST=0.9981;RSQ=0.9728;ERATE=0.0004;THETA=0.0008;AC=2133;AN=2184 GT:DS:GL:BD 0.97664833 1
1 90303173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90303205 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7986;ERATE=0.0006;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90303210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5750;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90303257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.9407;AVGPOST=0.9979;RSQ=0.9884;ERATE=0.0003;THETA=0.0015;AC=2056;AN=2184 GT:DS:GL:BD 0.94139194 1
1 90303277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8880;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90303331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5389;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90303356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8768;ERATE=0.0003;THETA=0.0021;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90303362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0272;AVGPOST=0.9988;RSQ=0.9832;ERATE=0.0004;THETA=0.0009;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 90303439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0047;AVGPOST=0.9961;RSQ=0.6876;ERATE=0.0006;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90303459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.5897;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90303515 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.4828;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90303536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90303553 . ATTATAT A 131 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3516;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90303628 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0031;AVGPOST=0.9978;RSQ=0.7004;ERATE=0.0004;THETA=0.0062;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90303639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8533;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90303684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.6452;AVGPOST=0.9875;RSQ=0.9814;ERATE=0.0009;THETA=0.0006;AC=1416;AN=2184 GT:DS:GL:BD 0.64835167 1
1 90303767 . AAAG A 21441 PASS INDEL;BAVGPOST=0.919;BRSQ=0.852;LDAF=0.6271;AVGPOST=0.8346;RSQ=0.7327;ERATE=0.0559;THETA=0.0009;AC=1419;AN=2184 GT:DS:GL:BD 0.64972526 1
1 90303775 . GA G 793 PASS INDEL;BAVGPOST=0.975;BRSQ=0.626;LDAF=0.0597;AVGPOST=0.9382;RSQ=0.5917;ERATE=0.0061;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 90303828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8440;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90303873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6483;AVGPOST=0.9972;RSQ=0.9956;ERATE=0.0004;THETA=0.0006;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 90303893 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9125;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90303939 . T TA 300 PASS INDEL;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0170;AVGPOST=0.9962;RSQ=0.9123;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90303944 . A AT 2599 PASS INDEL;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0173;AVGPOST=0.9974;RSQ=0.9448;ERATE=0.0005;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90303978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7888;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90304024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6486;AVGPOST=0.9985;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 90304147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9670;AVGPOST=0.9991;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=2112;AN=2184 GT:DS:GL:BD 0.96703297 1
1 90304187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6490;AVGPOST=0.9981;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=1417;AN=2184 GT:DS:GL:BD 0.64880955 1
1 90304190 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90304195 . TG T 132 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5315;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90304251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6108;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90304297 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0070;AVGPOST=0.9973;RSQ=0.8668;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90304402 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90304507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5754;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90304511 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9997;RSQ=0.9818;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90304628 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6729;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90304636 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90304675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90304744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90304752 . CATT C 229 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5323;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90304759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90304765 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90304864 . T TTG 408 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7807;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90304884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5757;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90305014 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.9761;AVGPOST=0.9990;RSQ=0.9859;ERATE=0.0003;THETA=0.0013;AC=2132;AN=2184 GT:DS:GL:BD 0.97619045 1
1 90305031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9283;AVGPOST=0.9993;RSQ=0.9960;ERATE=0.0003;THETA=0.0006;AC=2027;AN=2184 GT:DS:GL:BD 0.92811358 1
1 90305077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7324;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90305114 . C CT 278 PASS INDEL;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7577;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90305161 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90305176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9649;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90305182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0052;AVGPOST=0.9986;RSQ=0.9105;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90305217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9681;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0007;AC=2114;AN=2184 GT:DS:GL:BD 0.96794873 1
1 90305345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.900;LDAF=0.0117;AVGPOST=0.9984;RSQ=0.9390;ERATE=0.0003;THETA=0.0015;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90305448 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90305471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90305771 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8204;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90305779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0079;AVGPOST=0.9972;RSQ=0.8691;ERATE=0.0005;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90305801 . C CAA 7385 PASS INDEL;BAVGPOST=0.966;BRSQ=0.894;LDAF=0.2061;AVGPOST=0.9489;RSQ=0.8696;ERATE=0.0124;THETA=0.0005;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 90305802 . A AC 1038 PASS INDEL;BAVGPOST=0.946;BRSQ=0.813;LDAF=0.1654;AVGPOST=0.9315;RSQ=0.8016;ERATE=0.0057;THETA=0.0035;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 90305865 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.958;LDAF=0.1512;AVGPOST=0.9802;RSQ=0.9496;ERATE=0.0006;THETA=0.0006;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 90305904 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8240;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90305905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90306032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90306086 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5781;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90306130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.975;LDAF=0.0936;AVGPOST=0.9939;RSQ=0.9763;ERATE=0.0005;THETA=0.0011;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 90306131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1342;AVGPOST=0.9948;RSQ=0.9839;ERATE=0.0003;THETA=0.0036;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 90306216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.991;LDAF=0.6664;AVGPOST=0.9903;RSQ=0.9860;ERATE=0.0009;THETA=0.0051;AC=1451;AN=2184 GT:DS:GL:BD 0.66437727 1
1 90306240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0083;AVGPOST=0.9991;RSQ=0.9550;ERATE=0.0004;THETA=0.0179;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90306251 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0269;AVGPOST=0.9970;RSQ=0.9615;ERATE=0.0003;THETA=0.0135;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 90306494 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0095;AVGPOST=0.9989;RSQ=0.9503;ERATE=0.0004;THETA=0.0034;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90306509 . T TG 22 PASS INDEL;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6058;ERATE=0.0008;THETA=0.0203;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90306700 . G GGT 2717 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0105;AVGPOST=0.9977;RSQ=0.9208;ERATE=0.0006;THETA=0.0137;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90306776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0038;AVGPOST=0.9972;RSQ=0.7200;ERATE=0.0012;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90306777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9672;ERATE=0.0003;THETA=0.0054;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90306798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6674;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90306829 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.946;LDAF=0.1290;AVGPOST=0.9847;RSQ=0.9559;ERATE=0.0008;THETA=0.0077;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 90306873 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7406;ERATE=0.0003;THETA=0.0113;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90306927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0083;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90306929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8177;ERATE=0.0003;THETA=0.0116;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90306968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.936;LDAF=0.0541;AVGPOST=0.9866;RSQ=0.9019;ERATE=0.0018;THETA=0.0129;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 90307014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0071;AVGPOST=0.9979;RSQ=0.9020;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90307156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90307184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9397;ERATE=0.0004;THETA=0.0021;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90307340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8376;ERATE=0.0003;THETA=0.0094;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90307480 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0163;AVGPOST=0.9989;RSQ=0.9702;ERATE=0.0003;THETA=0.0090;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90307518 rs71585136 TC T 20391 PASS INDEL;BAVGPOST=0.942;BRSQ=0.920;LDAF=0.5342;AVGPOST=0.9128;RSQ=0.8930;ERATE=0.0103;THETA=0.0064;AC=1193;AN=2184 GT:DS:GL:BD 0.54624540 1
1 90307542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0076;AVGPOST=0.9965;RSQ=0.8208;ERATE=0.0003;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90307704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0079;AVGPOST=0.9985;RSQ=0.9181;ERATE=0.0006;THETA=0.0053;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90307763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.764;LDAF=0.0165;AVGPOST=0.9959;RSQ=0.9004;ERATE=0.0007;THETA=0.0038;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90307826 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0056;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90307899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2445;AVGPOST=0.9920;RSQ=0.9846;ERATE=0.0005;THETA=0.0007;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 90307999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90308101 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.6021;AVGPOST=0.9873;RSQ=0.9804;ERATE=0.0005;THETA=0.0011;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 90308117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0205;AVGPOST=0.9986;RSQ=0.9755;ERATE=0.0003;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 90308119 . AT A 1082 PASS INDEL;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8520;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90308186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90308204 rs34585512 CTG C 25029 PASS INDEL;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1385;AVGPOST=0.9944;RSQ=0.9825;ERATE=0.0005;THETA=0.0009;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 90308211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0092;AVGPOST=0.9992;RSQ=0.9639;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90308458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90308511 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90308517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7532;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90308543 . TTTG T 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5089;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90308776 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7179;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90308843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.9851;AVGPOST=0.9989;RSQ=0.9710;ERATE=0.0003;THETA=0.0016;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 90308899 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90308962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0280;AVGPOST=0.9951;RSQ=0.9285;ERATE=0.0006;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 90309079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.537;LDAF=0.0139;AVGPOST=0.9859;RSQ=0.5715;ERATE=0.0012;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90309085 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0264;AVGPOST=0.9910;RSQ=0.8642;ERATE=0.0006;THETA=0.0010;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 90309087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0070;AVGPOST=0.9916;RSQ=0.5590;ERATE=0.0009;THETA=0.0025;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90309126 . TG T 17 PASS INDEL;BAVGPOST=0.999;BRSQ=0.506;LDAF=0.0082;AVGPOST=0.9867;RSQ=0.3432;ERATE=0.0015;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90309130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0035;AVGPOST=0.9969;RSQ=0.6216;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90309204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.558;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6488;ERATE=0.0006;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90309211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90309371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0109;AVGPOST=0.9957;RSQ=0.8646;ERATE=0.0005;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90309400 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.742;LDAF=0.0103;AVGPOST=0.9935;RSQ=0.7465;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90309519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.887;LDAF=0.2261;AVGPOST=0.9697;RSQ=0.9411;ERATE=0.0006;THETA=0.0003;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 90309520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.887;LDAF=0.2270;AVGPOST=0.9686;RSQ=0.9384;ERATE=0.0007;THETA=0.0006;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 90309521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.887;LDAF=0.2295;AVGPOST=0.9682;RSQ=0.9378;ERATE=0.0006;THETA=0.0003;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 90309525 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.896;LDAF=0.2346;AVGPOST=0.9636;RSQ=0.9294;ERATE=0.0012;THETA=0.0011;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 90309587 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0054;AVGPOST=0.9960;RSQ=0.6875;ERATE=0.0008;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90309623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.9845;AVGPOST=0.9975;RSQ=0.9324;ERATE=0.0006;THETA=0.0004;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 90310183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0214;AVGPOST=0.9985;RSQ=0.9740;ERATE=0.0004;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90310276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90310411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8571;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90310416 . T TA 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90310420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90310443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8667;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90310455 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9857;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90310503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0054;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0003;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90310538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90310539 . A AG 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90310623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9815;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90310624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90310682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9710;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90310687 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9341;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90310734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9239;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90311030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90311144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.625;LDAF=0.0061;AVGPOST=0.9947;RSQ=0.6339;ERATE=0.0006;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90311221 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0310;AVGPOST=0.9971;RSQ=0.9640;ERATE=0.0004;THETA=0.0033;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 90311269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5218;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90311276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90311347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6574;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90311387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0159;AVGPOST=0.9968;RSQ=0.9251;ERATE=0.0005;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90311556 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7019;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90311642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90311781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90311803 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0122;AVGPOST=0.9983;RSQ=0.9459;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90311841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6273;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90312135 . T TA 816 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0081;AVGPOST=0.9984;RSQ=0.9129;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90312167 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9609;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90312202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90312240 . G GT 201 PASS INDEL;BAVGPOST=0.974;BRSQ=0.576;LDAF=0.0507;AVGPOST=0.9418;RSQ=0.5078;ERATE=0.0181;THETA=0.0028;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 90312276 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7769;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90312328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90312357 . AG A 1224 PASS INDEL;BAVGPOST=0.995;BRSQ=0.962;LDAF=0.0561;AVGPOST=0.9973;RSQ=0.9802;ERATE=0.0004;THETA=0.0003;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 90312358 . GA G 8026 PASS INDEL;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0583;AVGPOST=0.9958;RSQ=0.9709;ERATE=0.0006;THETA=0.0007;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 90312372 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7447;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90312485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6598;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90312524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.6629;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90312629 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6115;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90312657 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9169;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90312697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0073;AVGPOST=0.9983;RSQ=0.9027;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90312742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2433;AVGPOST=0.9928;RSQ=0.9859;ERATE=0.0004;THETA=0.0004;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 90312928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6250;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90313016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.850;LDAF=0.0103;AVGPOST=0.9935;RSQ=0.7523;ERATE=0.0010;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90313041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0079;AVGPOST=0.9985;RSQ=0.9200;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90313045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0237;AVGPOST=0.9996;RSQ=0.9934;ERATE=0.0003;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 90313120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90313178 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0074;AVGPOST=0.9988;RSQ=0.9314;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90313210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90313239 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6458;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90313310 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8784;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90313429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.752;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7173;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90313443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0059;AVGPOST=0.9974;RSQ=0.8405;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90313466 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90313518 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0172;AVGPOST=0.9977;RSQ=0.9512;ERATE=0.0005;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 90313567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9411;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90313693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90313702 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90313788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0218;AVGPOST=0.9992;RSQ=0.9869;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90313861 . TACC T 54 PASS INDEL;BAVGPOST=0.997;BRSQ=0.717;LDAF=0.0136;AVGPOST=0.9818;RSQ=0.4546;ERATE=0.0041;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90313972 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0093;AVGPOST=0.9981;RSQ=0.9199;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90313974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6027;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90314054 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.7008;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90314103 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90314139 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9567;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90314147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3226;AVGPOST=0.9963;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 90314267 . G GT 27 PASS INDEL;BAVGPOST=0.992;BRSQ=0.565;LDAF=0.0142;AVGPOST=0.9828;RSQ=0.5035;ERATE=0.0036;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90314321 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0079;AVGPOST=0.9980;RSQ=0.9071;ERATE=0.0004;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90314330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7224;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90314478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5723;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90314503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.791;LDAF=0.0044;AVGPOST=0.9964;RSQ=0.6874;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90314522 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9584;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90314637 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6131;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90314660 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6758;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90314729 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0050;AVGPOST=0.9979;RSQ=0.8558;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90314750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7717;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90314785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90314822 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90314849 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90315025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0222;AVGPOST=0.9992;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 90315187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90315380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8642;ERATE=0.0006;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90315396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5311;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90315408 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4087;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=892;AN=2184 GT:DS:GL:BD 0.40842491 0
1 90315417 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6760;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90315436 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5299;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90315440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90315453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.5822;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90315590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0341;AVGPOST=0.9988;RSQ=0.9844;ERATE=0.0004;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 90315734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1356;AVGPOST=0.9982;RSQ=0.9945;ERATE=0.0003;THETA=0.0007;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 90315760 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.9964;AVGPOST=0.9982;RSQ=0.7835;ERATE=0.0004;THETA=0.0003;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 90315896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8110;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90316036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.865;LDAF=0.0420;AVGPOST=0.9862;RSQ=0.8748;ERATE=0.0005;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 90316049 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0193;AVGPOST=0.9988;RSQ=0.9714;ERATE=0.0004;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 90316134 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90316268 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0294;AVGPOST=0.9995;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 90316281 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0190;AVGPOST=0.9994;RSQ=0.9867;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 90316366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90316521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0115;AVGPOST=0.9989;RSQ=0.9583;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90316524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90316537 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.526;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4927;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90316543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0083;AVGPOST=0.9956;RSQ=0.7745;ERATE=0.0006;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90316776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9689;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90316790 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90316862 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90317031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8455;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90317077 . T TC 94 PASS INDEL;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6545;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90317137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4651;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90317198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.514;LDAF=0.0050;AVGPOST=0.9935;RSQ=0.5009;ERATE=0.0015;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90317346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.954;LDAF=0.1468;AVGPOST=0.9840;RSQ=0.9534;ERATE=0.0007;THETA=0.0006;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 90317360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9779;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90317361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7889;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90317389 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8571;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90317532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9751;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90317664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90317821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90317871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90317895 . G GCTCC 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4083;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90317976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7610;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90318024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6995;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90318033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1087;AVGPOST=0.9979;RSQ=0.9920;ERATE=0.0004;THETA=0.0002;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 90318314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90318315 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90318391 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90318415 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90318520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1363;AVGPOST=0.9981;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 90318533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7296;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90318543 . TA T 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5470;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90318843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.900;LDAF=0.0116;AVGPOST=0.9976;RSQ=0.9144;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90318889 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6652;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90318994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8741;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90319033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8648;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90319085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90319130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.970;LDAF=0.1710;AVGPOST=0.9917;RSQ=0.9784;ERATE=0.0008;THETA=0.0014;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 90319243 . T TCCTGA 205 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4411;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90319280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90319302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90319321 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9458;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90319346 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9993;RSQ=0.9297;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90319478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90319537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90319701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90319813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7109;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90319826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90319847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90319991 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90320006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9751;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90320159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5996;AVGPOST=0.9967;RSQ=0.9952;ERATE=0.0004;THETA=0.0004;AC=1309;AN=2184 GT:DS:GL:BD 0.59935898 1
1 90320193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90320470 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0153;AVGPOST=0.9980;RSQ=0.9513;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90320548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90320607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90320614 . TTC T 569 PASS INDEL;BAVGPOST=0.972;BRSQ=0.710;LDAF=0.0689;AVGPOST=0.9410;RSQ=0.6177;ERATE=0.0327;THETA=0.0039;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 90320741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7902;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90320762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9403;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90320995 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0069;AVGPOST=0.9980;RSQ=0.9017;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90321154 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90321527 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1144;AVGPOST=0.9971;RSQ=0.9886;ERATE=0.0006;THETA=0.0010;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 90321560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90321703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9432;ERATE=0.0006;THETA=0.0025;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90321749 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.6032;AVGPOST=0.9894;RSQ=0.9849;ERATE=0.0005;THETA=0.0061;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 90321785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90321838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5588;ERATE=0.0003;THETA=0.0081;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90321882 . ATC A 2134 PASS INDEL;BAVGPOST=0.953;BRSQ=0.752;LDAF=0.1146;AVGPOST=0.9303;RSQ=0.7225;ERATE=0.0213;THETA=0.0008;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 90321893 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.973;LDAF=0.2434;AVGPOST=0.9828;RSQ=0.9675;ERATE=0.0004;THETA=0.0047;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 90321906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5490;ERATE=0.0003;THETA=0.0168;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90321909 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.785;LDAF=0.0066;AVGPOST=0.9984;RSQ=0.8933;ERATE=0.0004;THETA=0.0095;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90322002 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.740;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8424;ERATE=0.0003;THETA=0.0197;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90322142 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0150;AVGPOST=0.9975;RSQ=0.9349;ERATE=0.0004;THETA=0.0301;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90322182 . ACTG A 357 PASS INDEL;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.6005;ERATE=0.0004;THETA=0.0114;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90322197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.892;LDAF=0.0594;AVGPOST=0.9892;RSQ=0.9249;ERATE=0.0009;THETA=0.0218;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 90322266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.9973;AVGPOST=0.9991;RSQ=0.8609;ERATE=0.0003;THETA=0.0147;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 90322384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.840;LDAF=0.6903;AVGPOST=0.9149;RSQ=0.8605;ERATE=0.0872;THETA=0.0083;AC=1525;AN=2184 GT:DS:GL:BD 0.69826007 1
1 90322469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.771;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8588;ERATE=0.0005;THETA=0.0198;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90322475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7639;ERATE=0.0004;THETA=0.0184;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90322550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7315;ERATE=0.0004;THETA=0.0233;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90322575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.841;LDAF=0.0672;AVGPOST=0.9777;RSQ=0.8647;ERATE=0.0026;THETA=0.0062;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 90322582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4233;ERATE=0.0005;THETA=0.0076;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90322639 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4922;ERATE=0.0004;THETA=0.0204;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90322771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.5741;ERATE=0.0013;THETA=0.0107;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90322798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5401;ERATE=0.0004;THETA=0.0061;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90322815 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.4759;ERATE=0.0005;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90322882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.678;LDAF=0.0560;AVGPOST=0.9586;RSQ=0.6994;ERATE=0.0023;THETA=0.0187;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 90322909 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7348;ERATE=0.0005;THETA=0.0076;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90323033 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.6938;ERATE=0.0005;THETA=0.0054;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90323114 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5690;ERATE=0.0004;THETA=0.0186;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90323115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6049;ERATE=0.0004;THETA=0.0164;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90323387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90323425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0072;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90323445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9623;ERATE=0.0003;THETA=0.0126;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90323475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8693;ERATE=0.0003;THETA=0.0036;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90323575 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.675;LDAF=0.0055;AVGPOST=0.9957;RSQ=0.6774;ERATE=0.0005;THETA=0.0122;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90323729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5588;ERATE=0.0005;THETA=0.0078;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90323730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9602;ERATE=0.0003;THETA=0.0096;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90323767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.1053;AVGPOST=0.9921;RSQ=0.9670;ERATE=0.0004;THETA=0.0010;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 90323768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0185;AVGPOST=0.9994;RSQ=0.9852;ERATE=0.0004;THETA=0.0037;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 90323792 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5400;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90323872 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90323897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90323916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.968;LDAF=0.0594;AVGPOST=0.9920;RSQ=0.9505;ERATE=0.0004;THETA=0.0010;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 90324065 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0185;AVGPOST=0.9994;RSQ=0.9849;ERATE=0.0003;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 90324186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6315;ERATE=0.0006;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90324350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.4997;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90324429 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0113;AVGPOST=0.9964;RSQ=0.8927;ERATE=0.0004;THETA=0.0026;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90324475 . CATAA C 383 PASS INDEL;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0069;AVGPOST=0.9974;RSQ=0.8502;ERATE=0.0005;THETA=0.0039;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90324521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90324611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0090;AVGPOST=0.9986;RSQ=0.9403;ERATE=0.0003;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90324632 . AC A 1298 PASS INDEL;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0111;AVGPOST=0.9966;RSQ=0.8850;ERATE=0.0005;THETA=0.0027;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90324766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8082;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90324773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0084;AVGPOST=0.9994;RSQ=0.9698;ERATE=0.0005;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90324836 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.528;LDAF=0.0055;AVGPOST=0.9973;RSQ=0.8143;ERATE=0.0005;THETA=0.0021;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90324853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0012;AVGPOST=0.9980;RSQ=0.3446;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90324873 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90325003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0105;AVGPOST=0.9992;RSQ=0.9678;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90325017 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90325055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90325067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90325112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7557;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90325210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0038;AVGPOST=0.9983;RSQ=0.8507;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90325277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9689;ERATE=0.0003;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90325282 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5420;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90325291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90325293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90325447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90325475 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1580;AVGPOST=0.9971;RSQ=0.9922;ERATE=0.0004;THETA=0.0015;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 90325518 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90325564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1264;AVGPOST=0.9967;RSQ=0.9892;ERATE=0.0004;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 90325635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9905;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90325845 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9325;ERATE=0.0004;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90325869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7846;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90326015 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0009;AVGPOST=0.9987;RSQ=0.4141;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90326034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0074;AVGPOST=0.9953;RSQ=0.7966;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90326169 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.972;LDAF=0.1056;AVGPOST=0.9905;RSQ=0.9610;ERATE=0.0014;THETA=0.0013;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 90326188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.861;LDAF=0.0205;AVGPOST=0.9851;RSQ=0.7270;ERATE=0.0013;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90326309 rs10531160 CTA C 2900 PASS INDEL;BAVGPOST=0.891;BRSQ=0.731;LDAF=0.2620;AVGPOST=0.8400;RSQ=0.6868;ERATE=0.0162;THETA=0.0009;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 90326315 . C CAAAAAAA 325 PASS INDEL;BAVGPOST=0.370;BRSQ=0.037;LDAF=0.3523;AVGPOST=0.6545;RSQ=0.3656;ERATE=0.0158;THETA=0.0003;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 90326344 rs59411711 A AT 1516 PASS INDEL;BAVGPOST=0.545;BRSQ=0.149;LDAF=0.3606;AVGPOST=0.6741;RSQ=0.4154;ERATE=0.0213;THETA=0.0003;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 90326354 rs34045971 T TAAA 88 PASS INDEL;BAVGPOST=0.901;BRSQ=0.113;LDAF=0.1839;AVGPOST=0.7195;RSQ=0.2392;ERATE=0.0194;THETA=0.0006;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 90326368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.446;LDAF=0.0733;AVGPOST=0.9105;RSQ=0.4870;ERATE=0.0098;THETA=0.0009;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 90326392 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.753;LDAF=0.0076;AVGPOST=0.9943;RSQ=0.7064;ERATE=0.0006;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90326593 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0953;AVGPOST=0.9970;RSQ=0.9878;ERATE=0.0003;THETA=0.0003;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 90326664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.524;LDAF=0.0216;AVGPOST=0.9771;RSQ=0.5723;ERATE=0.0099;THETA=0.0010;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90326687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1012;AVGPOST=0.9978;RSQ=0.9901;ERATE=0.0005;THETA=0.0012;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 90326695 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0093;AVGPOST=0.9965;RSQ=0.8604;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90326746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7332;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90326793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90327143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9739;ERATE=0.0003;THETA=0.0019;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90327164 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8912;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90327221 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5096;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90327269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9254;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90327273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90327327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7475;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90327361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90327530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7171;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90327555 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2912;AVGPOST=0.9919;RSQ=0.9860;ERATE=0.0016;THETA=0.0006;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 90327593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0088;AVGPOST=0.9988;RSQ=0.9409;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90327715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4978;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90327811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90327815 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90327985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.916;LDAF=0.0142;AVGPOST=0.9979;RSQ=0.9421;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90328036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0151;AVGPOST=0.9968;RSQ=0.9251;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90328072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8196;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90328122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1018;AVGPOST=0.9973;RSQ=0.9902;ERATE=0.0003;THETA=0.0018;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 90328223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5602;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90328226 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90328321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90328483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.979;LDAF=0.1622;AVGPOST=0.9846;RSQ=0.9569;ERATE=0.0008;THETA=0.0008;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 90328862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9123;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90328927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90328946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90328987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.7504;ERATE=0.0012;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90329054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0108;AVGPOST=0.9995;RSQ=0.9792;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90329218 rs79443646 A AG 36464 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3057;AVGPOST=0.9919;RSQ=0.9860;ERATE=0.0009;THETA=0.0004;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 90329298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90329328 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90329351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90329374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8253;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90329547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6910;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90329552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90329555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5338;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90329667 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0239;AVGPOST=0.9997;RSQ=0.9951;ERATE=0.0003;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 90329926 . AG A 160 PASS INDEL;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0066;AVGPOST=0.9993;RSQ=0.9500;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90329931 . A AAAG 473 PASS INDEL;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9629;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90329971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90330005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8553;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90330191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.9087;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90330471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9580;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90330502 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0510;AVGPOST=0.9993;RSQ=0.9955;ERATE=0.0004;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 90330516 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8973;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90330526 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90330606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90330615 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5836;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90330617 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5995;ERATE=0.0012;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90330623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0157;AVGPOST=0.9991;RSQ=0.9760;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90330861 . AT A 701 PASS INDEL;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0181;AVGPOST=0.9957;RSQ=0.8986;ERATE=0.0005;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 90330933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.710;LDAF=0.0058;AVGPOST=0.9964;RSQ=0.7403;ERATE=0.0007;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90331108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8754;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90331223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.5270;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90331439 . TG T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.5926;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90331592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90331625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90331971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90332029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90332145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.5077;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90332183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90332215 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6237;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90332276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0352;AVGPOST=0.9991;RSQ=0.9900;ERATE=0.0003;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 90332358 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90332381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.1341;ERATE=0.0004;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90332393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6542;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90332439 . T TTA 1417 PASS INDEL;BAVGPOST=0.997;BRSQ=0.875;LDAF=0.0119;AVGPOST=0.9962;RSQ=0.8711;ERATE=0.0004;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90332443 . T TA 73 PASS INDEL;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0089;AVGPOST=0.9972;RSQ=0.8650;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90332445 . C CA 586 PASS INDEL;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0088;AVGPOST=0.9972;RSQ=0.8730;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90332447 . T TAA 1010 PASS INDEL;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0090;AVGPOST=0.9975;RSQ=0.8866;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90332451 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9987;RSQ=0.9350;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90332490 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90332648 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5096;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90332681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6250;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90332687 . CA C 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6500;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90332691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90332706 . TC T 1020 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9989;RSQ=0.9559;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90332717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90332728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90333050 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2873;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0004;THETA=0.0005;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 90333055 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5735;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90333132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0903;AVGPOST=0.9983;RSQ=0.9912;ERATE=0.0004;THETA=0.0006;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 90333164 . AT A 1843 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0191;AVGPOST=0.9990;RSQ=0.9771;ERATE=0.0004;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 90333174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7210;ERATE=0.0013;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90333175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0356;AVGPOST=0.9990;RSQ=0.9890;ERATE=0.0004;THETA=0.0007;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 90333238 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90333264 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9207;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90333297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7280;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90333414 . TAGAA T 46 PASS INDEL;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5696;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90333473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7515;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90333689 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90333853 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.0578;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90333865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8793;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90333911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90334014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9048;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90334040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90334046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0077;AVGPOST=0.9985;RSQ=0.9187;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90334154 . CTA C 567 PASS INDEL;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7488;ERATE=0.0008;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90334236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7971;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90334458 . T TTTTTG 1042 PASS INDEL;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0080;AVGPOST=0.9941;RSQ=0.6976;ERATE=0.0008;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90334510 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9288;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90334632 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90334718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0947;AVGPOST=0.9981;RSQ=0.9902;ERATE=0.0004;THETA=0.0005;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 90334728 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7713;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90334802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9278;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90334804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9621;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90334818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6128;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90334888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90335013 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7615;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90335034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9109;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90335209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9320;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90335237 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5233;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90335260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4209;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90335296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7148;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90335364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7620;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90335391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.5307;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90335520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7717;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90335626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.1604;AVGPOST=0.9896;RSQ=0.9702;ERATE=0.0006;THETA=0.0007;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 90335669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.686;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8907;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90335708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0081;AVGPOST=0.9990;RSQ=0.9562;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90335745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0037;AVGPOST=0.9974;RSQ=0.7413;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90335748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9009;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90335817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.635;LDAF=0.0040;AVGPOST=0.9976;RSQ=0.7847;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90336027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0468;AVGPOST=0.9979;RSQ=0.9859;ERATE=0.0003;THETA=0.0002;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 90336142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90336244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1279;AVGPOST=0.9982;RSQ=0.9931;ERATE=0.0004;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 90336326 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9719;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90336351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90336616 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90336653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9077;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90336718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6689;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90336765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8473;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90336779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90336900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90337025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1280;AVGPOST=0.9984;RSQ=0.9939;ERATE=0.0005;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 90337181 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0165;AVGPOST=0.9995;RSQ=0.9879;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90337226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90337274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90337281 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6106;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90337325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90337337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9651;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90337369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9281;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90337404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90337426 . CTGTT C 39 PASS INDEL;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0053;AVGPOST=0.9948;RSQ=0.5777;ERATE=0.0029;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90337458 . G GC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7354;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90337472 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0822;AVGPOST=0.9980;RSQ=0.9894;ERATE=0.0003;THETA=0.0003;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 90337480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0508;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0006;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 90337617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0508;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 90337619 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5378;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90337819 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7363;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90337874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0042;AVGPOST=0.9983;RSQ=0.8587;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90337882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0056;AVGPOST=0.9987;RSQ=0.9186;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90337913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9165;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90337916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90337982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.6692;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90337996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90338129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.1975;AVGPOST=0.9936;RSQ=0.9838;ERATE=0.0003;THETA=0.0004;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 90338164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90338213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8825;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90338229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90338275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9488;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90338400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0189;AVGPOST=0.9994;RSQ=0.9867;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 90338419 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9734;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90338448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9809;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90338499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7312;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90338526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9442;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90338682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90338702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0354;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 90338759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90338766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90338774 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90338961 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9910;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90339059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5084;ERATE=0.0004;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90339117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0101;AVGPOST=1.0000;RSQ=0.9978;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90339193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2872;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 90339223 . T TC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6349;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90339260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90339303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8413;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90339385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9741;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90339400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0947;AVGPOST=0.9992;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 90339537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6675;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90339564 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8815;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90339587 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9628;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90339598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0601;AVGPOST=0.9954;RSQ=0.9664;ERATE=0.0004;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 90339669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2896;AVGPOST=0.9978;RSQ=0.9955;ERATE=0.0005;THETA=0.0003;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 90339688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5680;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90339758 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90339821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0354;AVGPOST=0.9996;RSQ=0.9955;ERATE=0.0003;THETA=0.0007;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 90339831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90340241 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6107;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90340304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0453;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0003;THETA=0.0006;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 90340439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7798;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90340541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90340714 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7373;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90340794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5389;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90340827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90340902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90340943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.944;LDAF=0.0631;AVGPOST=0.9937;RSQ=0.9608;ERATE=0.0004;THETA=0.0006;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 90340955 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9289;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90341039 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90341079 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90341111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7917;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90341112 . TA T 354 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8548;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90341159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90341166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90341171 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5041;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90341179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0038;AVGPOST=0.9981;RSQ=0.8348;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90341285 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7202;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90341306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6751;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90341368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9197;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90341429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9995;RSQ=0.9768;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90341463 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90341527 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90341578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90341590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90341605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9379;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90341689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6521;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90341708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0165;AVGPOST=0.9996;RSQ=0.9890;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90341863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0136;AVGPOST=0.9992;RSQ=0.9748;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90341881 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4819;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90341929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5489;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90341991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.8247;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90342098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0947;AVGPOST=0.9991;RSQ=0.9951;ERATE=0.0004;THETA=0.0007;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 90342248 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0137;AVGPOST=0.9993;RSQ=0.9781;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90342381 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90342503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5697;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90342559 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.702;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8738;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90342685 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9993;RSQ=0.9377;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90342777 . TTC T 456 PASS INDEL;BAVGPOST=0.995;BRSQ=0.769;LDAF=0.0197;AVGPOST=0.9793;RSQ=0.6176;ERATE=0.0031;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90342837 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9832;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90342878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90343041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9668;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90343121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0100;AVGPOST=0.9994;RSQ=0.9726;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90343262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90343338 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.941;LDAF=0.0522;AVGPOST=0.9956;RSQ=0.9639;ERATE=0.0003;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 90343347 . ACT A 209 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6115;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90343567 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4697;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90343848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7721;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90343856 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0276;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0003;THETA=0.0016;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 90343875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7610;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90343922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1093;AVGPOST=0.9986;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 90343946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2902;AVGPOST=0.9983;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 90343951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1361;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0003;THETA=0.0007;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 90344000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9883;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90344033 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8234;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90344105 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6406;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90344114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7139;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90344137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0100;AVGPOST=0.9998;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90344262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0100;AVGPOST=1.0000;RSQ=0.9978;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90344314 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0101;AVGPOST=0.9995;RSQ=0.9748;ERATE=0.0004;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90344484 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.631;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.6034;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90344522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.528;LDAF=0.0183;AVGPOST=0.9806;RSQ=0.5936;ERATE=0.0019;THETA=0.0013;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90344583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0172;AVGPOST=0.9974;RSQ=0.9486;ERATE=0.0005;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90344615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90344633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4502;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90344750 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7766;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90344788 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0375;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 90344852 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90344864 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90344980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6196;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90345024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0385;AVGPOST=0.9981;RSQ=0.9833;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 90345066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0083;AVGPOST=0.9997;RSQ=0.9857;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90345095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9162;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90345127 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7355;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90345131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1277;AVGPOST=0.9991;RSQ=0.9963;ERATE=0.0004;THETA=0.0017;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 90345265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.864;LDAF=0.0080;AVGPOST=0.9978;RSQ=0.8810;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90345302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5192;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90345377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90345414 . T TAATTGGAAAAATTAG 870 PASS INDEL;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0041;AVGPOST=0.9962;RSQ=0.5995;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90345468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0136;AVGPOST=0.9982;RSQ=0.9470;ERATE=0.0004;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90345654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8409;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90345673 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8268;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90345763 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8610;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90345870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5362;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90345998 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9111;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90346044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4177;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90346071 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90346108 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0158;AVGPOST=0.9973;RSQ=0.9272;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90346231 . C CTAGA 506 PASS INDEL;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7241;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90346239 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7293;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90346289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7973;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90346443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9259;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90346544 . CT C 156 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90346580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0076;AVGPOST=0.9984;RSQ=0.9211;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90346856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90346948 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90347173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90347429 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90347472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0902;AVGPOST=0.9994;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 90347480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90347554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0388;AVGPOST=0.9994;RSQ=0.9935;ERATE=0.0003;THETA=0.0007;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 90347576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5901;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90347595 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8735;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90347673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8548;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90347880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9777;ERATE=0.0004;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90347925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0348;AVGPOST=0.9976;RSQ=0.9757;ERATE=0.0003;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 90347926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0074;AVGPOST=0.9975;RSQ=0.8788;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90347947 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0133;AVGPOST=0.9983;RSQ=0.9488;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90347972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0112;AVGPOST=0.9993;RSQ=0.9723;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90348033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6915;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90348050 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90348051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0055;AVGPOST=0.9985;RSQ=0.8980;ERATE=0.0005;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90348093 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9732;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90348203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90348209 . GT G 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90348238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90348239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90348283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90348514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9663;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90348558 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0100;AVGPOST=0.9999;RSQ=0.9934;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90348597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90348707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.897;LDAF=0.0596;AVGPOST=0.9885;RSQ=0.9254;ERATE=0.0005;THETA=0.0003;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 90348746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0091;AVGPOST=0.9983;RSQ=0.9232;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90348771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.7251;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90348807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0375;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0003;THETA=0.0007;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 90348947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90349027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0112;AVGPOST=0.9993;RSQ=0.9747;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90349105 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90349303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0110;AVGPOST=0.9990;RSQ=0.9710;ERATE=0.0003;THETA=0.0012;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90349347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0962;AVGPOST=0.9980;RSQ=0.9902;ERATE=0.0004;THETA=0.0007;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 90349348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7477;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90349368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90349413 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9443;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90349515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9870;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90349519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9989;RSQ=0.9518;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90349595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6115;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90349607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90349612 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0278;AVGPOST=0.9993;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 90349621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9805;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90349662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7848;ERATE=0.0012;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90349703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5904;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90349712 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5407;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90349792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90349801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0472;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0003;THETA=0.0010;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 90349851 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9995;RSQ=0.9802;ERATE=0.0003;THETA=0.0021;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90350082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5535;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90350112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7592;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90350149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9830;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90350279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90350386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.7905;ERATE=0.0010;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90350442 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90350510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90350710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90350715 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9723;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90350791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0111;AVGPOST=0.9994;RSQ=0.9776;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90351023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.9227;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90351055 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1086;AVGPOST=0.9985;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 90351466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0372;AVGPOST=0.9994;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 90351561 . A AC 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0026;AVGPOST=0.9971;RSQ=0.5626;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90351715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9141;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90351857 rs112575462 C CG 5284 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0368;AVGPOST=0.9981;RSQ=0.9803;ERATE=0.0005;THETA=0.0009;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 90352086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0373;AVGPOST=0.9994;RSQ=0.9938;ERATE=0.0003;THETA=0.0009;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 90352231 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6350;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90352241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90352279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0522;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 90352305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8382;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90352597 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8351;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90352747 . GTTAA G 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6316;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90352910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6775;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90352994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5554;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90353008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0587;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0004;THETA=0.0007;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 90353055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0585;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0006;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 90353122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0111;AVGPOST=0.9996;RSQ=0.9866;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90353144 . ACT A 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90353210 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0139;AVGPOST=0.9981;RSQ=0.9437;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90353215 . C CT 64 PASS INDEL;BAVGPOST=0.992;BRSQ=0.431;LDAF=0.0153;AVGPOST=0.9781;RSQ=0.4257;ERATE=0.0048;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90353337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0082;AVGPOST=0.9985;RSQ=0.9291;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90353343 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90353374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6601;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90353376 . ATTC A 900 PASS INDEL;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0089;AVGPOST=0.9958;RSQ=0.8447;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90353458 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0587;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 90353525 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90353560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90353651 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90353723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0128;AVGPOST=0.9988;RSQ=0.9657;ERATE=0.0004;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90353757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0585;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0007;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 90353790 . A AG 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5532;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90353798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90353895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90353989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3054;AVGPOST=0.9973;RSQ=0.9951;ERATE=0.0008;THETA=0.0006;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 90354066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9856;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90354070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5338;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90354077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.9291;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90354126 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90354149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90354229 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1212;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 90354385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0586;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 90354455 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90354538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6589;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90354567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0168;AVGPOST=0.9981;RSQ=0.9601;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90354568 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0126;AVGPOST=0.9980;RSQ=0.9401;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90354601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7831;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90354841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9656;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90355082 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.889;LDAF=0.0093;AVGPOST=0.9989;RSQ=0.9563;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90355107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90355230 . CAG C 158 PASS INDEL;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0037;AVGPOST=0.9952;RSQ=0.4908;ERATE=0.0014;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90355238 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5060;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90355303 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9007;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90355441 . G GA 821 PASS INDEL;BAVGPOST=0.994;BRSQ=0.811;LDAF=0.0255;AVGPOST=0.9780;RSQ=0.6686;ERATE=0.0051;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 90355529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.492;LDAF=0.0053;AVGPOST=0.9944;RSQ=0.6009;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90355619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0027;AVGPOST=0.9962;RSQ=0.4990;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90355740 . C CGAA 775 PASS INDEL;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0048;AVGPOST=0.9967;RSQ=0.7145;ERATE=0.0006;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90355746 . C CAATA 6306 PASS INDEL;BAVGPOST=0.992;BRSQ=0.937;LDAF=0.0598;AVGPOST=0.9911;RSQ=0.9469;ERATE=0.0010;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 90355968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.9065;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90355998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0068;AVGPOST=0.9987;RSQ=0.9253;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90356031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7164;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90356082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90356085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90356086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90356249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90356258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90356261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1090;AVGPOST=0.9988;RSQ=0.9947;ERATE=0.0004;THETA=0.0007;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 90356327 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2951;AVGPOST=0.9953;RSQ=0.9917;ERATE=0.0007;THETA=0.0002;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 90356338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8483;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90356506 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5386;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90356508 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.4245;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90356562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6389;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90356576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5542;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90356667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.537;LDAF=0.0061;AVGPOST=0.9945;RSQ=0.6696;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90356681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.618;LDAF=0.0079;AVGPOST=0.9893;RSQ=0.4480;ERATE=0.0019;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90356685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.949;LDAF=0.0694;AVGPOST=0.9823;RSQ=0.9053;ERATE=0.0041;THETA=0.0004;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 90356686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.790;LDAF=0.0121;AVGPOST=0.9910;RSQ=0.6959;ERATE=0.0018;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90356728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.1007;AVGPOST=0.9989;RSQ=0.9943;ERATE=0.0004;THETA=0.0004;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 90356741 . AG A 124 PASS INDEL;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7105;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90356770 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1082;AVGPOST=0.9990;RSQ=0.9953;ERATE=0.0004;THETA=0.0006;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 90356837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1205;AVGPOST=0.9984;RSQ=0.9941;ERATE=0.0004;THETA=0.0007;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 90356900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9835;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90357028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1202;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 90357073 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90357155 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0066;AVGPOST=0.9979;RSQ=0.8759;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90357180 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90357182 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8499;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90357457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8384;ERATE=0.0009;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90357482 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8524;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90357504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9988;RSQ=0.9426;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90357581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5291;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90357651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1006;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 90357662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0044;AVGPOST=0.9986;RSQ=0.8844;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90357996 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0065;AVGPOST=0.9990;RSQ=0.9447;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90358235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0029;AVGPOST=0.9962;RSQ=0.4380;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90358304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0145;AVGPOST=0.9967;RSQ=0.9145;ERATE=0.0005;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90358454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6388;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90358540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6631;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90358805 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90358811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6005;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90358812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9902;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90358832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8319;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90358898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9816;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90358937 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90358962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90359034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90359145 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5532;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90359217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0493;AVGPOST=0.9991;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 90359230 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8172;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90359318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90359520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90359556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1092;AVGPOST=0.9989;RSQ=0.9956;ERATE=0.0004;THETA=0.0007;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 90359589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.971;LDAF=0.3582;AVGPOST=0.9750;RSQ=0.9631;ERATE=0.0020;THETA=0.0005;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 90359706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5614;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90359731 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9800;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90359874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6971;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90359917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4339;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90360038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8093;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90360039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90360052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90360107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9315;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90360225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9267;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90360277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90360387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9719;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90360422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8258;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90360423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0086;AVGPOST=0.9991;RSQ=0.9599;ERATE=0.0003;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90360550 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9995;RSQ=0.9604;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90360562 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9980;RSQ=0.9063;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90360638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1003;AVGPOST=0.9992;RSQ=0.9963;ERATE=0.0004;THETA=0.0006;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 90360663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.849;LDAF=0.9867;AVGPOST=0.9947;RSQ=0.8575;ERATE=0.0006;THETA=0.0004;AC=2155;AN=2184 GT:DS:GL:BD 0.98672163 1
1 90360670 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4399;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90360685 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90360735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90360792 . CATATA C 241 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5980;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90360942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7450;ERATE=0.0008;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90361047 rs74575426 AT A 6190 PASS INDEL;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1237;AVGPOST=0.9921;RSQ=0.9709;ERATE=0.0010;THETA=0.0006;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 90361102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8560;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90361107 rs72510748 A AC 34065 PASS INDEL;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3163;AVGPOST=0.9943;RSQ=0.9895;ERATE=0.0007;THETA=0.0007;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 90361136 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0057;AVGPOST=0.9985;RSQ=0.8882;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90361177 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8546;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90361246 . CGTT C 2137 PASS INDEL;BAVGPOST=0.997;BRSQ=0.967;LDAF=0.0153;AVGPOST=0.9940;RSQ=0.8537;ERATE=0.0006;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90361247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0005;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90361383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7598;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90361409 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9987;RSQ=0.9522;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90361516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0276;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 90361539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9136;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90361543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1089;AVGPOST=0.9990;RSQ=0.9957;ERATE=0.0003;THETA=0.0007;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 90361548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0168;AVGPOST=0.9994;RSQ=0.9824;ERATE=0.0004;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90361602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90361603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9793;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90361745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0126;AVGPOST=0.9989;RSQ=0.9632;ERATE=0.0003;THETA=0.0012;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90361786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7229;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90361787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0167;AVGPOST=0.9992;RSQ=0.9794;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90361801 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0081;AVGPOST=0.9992;RSQ=0.9598;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90361814 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90361892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90361962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90362253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90362254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90362294 . CT C 151 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8450;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90362324 . TTCTCTC T 1957 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9734;ERATE=0.0003;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90362361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90362395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90362405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7421;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90362408 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90362473 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90362510 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90362524 . GGT G 1075 PASS INDEL;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0082;AVGPOST=0.9979;RSQ=0.9066;ERATE=0.0004;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90362565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9896;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90362576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0081;AVGPOST=0.9990;RSQ=0.9523;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90362602 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6698;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90362614 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3106;AVGPOST=0.9956;RSQ=0.9917;ERATE=0.0005;THETA=0.0007;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 90362639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.1721;AVGPOST=0.9921;RSQ=0.9798;ERATE=0.0005;THETA=0.0003;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 90362663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90362671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90362692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0371;AVGPOST=0.9997;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 90362911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90363075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90363097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90363241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90363257 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0051;AVGPOST=0.9983;RSQ=0.8539;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90363258 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.688;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6864;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90363282 . G GA 33 PASS INDEL;BAVGPOST=0.990;BRSQ=0.458;LDAF=0.0150;AVGPOST=0.9825;RSQ=0.5287;ERATE=0.0048;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90363287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7792;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90363310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90363321 . TGA T 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5255;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90363628 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0110;AVGPOST=0.9994;RSQ=0.9763;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90363705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90363725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90363726 . TTGG T 1459 PASS INDEL;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9369;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90363779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.7961;ERATE=0.0013;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90363813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90363837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90363941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1891;AVGPOST=0.9979;RSQ=0.9946;ERATE=0.0003;THETA=0.0007;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 90363943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90363944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5106;ERATE=0.0004;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90363983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90364015 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90364056 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0004;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90364442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90364450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90364451 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8688;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90364647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0003;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90364810 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9695;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90364994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90365095 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9775;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90365270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6498;ERATE=0.0011;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90365335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90365350 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90365362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90365369 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90365546 . GA G 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90365659 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90365660 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8281;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90365686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5962;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90365737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0208;AVGPOST=0.9976;RSQ=0.9564;ERATE=0.0010;THETA=0.0019;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 90365741 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90366084 . AC A 83 PASS INDEL;BAVGPOST=0.997;BRSQ=0.576;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5388;ERATE=0.0005;THETA=0.0088;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90366085 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.706;LDAF=0.0045;AVGPOST=0.9947;RSQ=0.5295;ERATE=0.0021;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90366161 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9424;ERATE=0.0003;THETA=0.0024;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90366278 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0251;AVGPOST=0.9961;RSQ=0.9312;ERATE=0.0005;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 90366338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90366446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90366482 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0340;AVGPOST=0.9989;RSQ=0.9884;ERATE=0.0003;THETA=0.0034;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 90366514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1110;AVGPOST=0.9960;RSQ=0.9842;ERATE=0.0004;THETA=0.0010;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 90366551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0081;AVGPOST=0.9992;RSQ=0.9609;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90366648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0079;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90366835 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0318;AVGPOST=0.9993;RSQ=0.9908;ERATE=0.0003;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 90366858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0182;AVGPOST=0.9969;RSQ=0.9393;ERATE=0.0004;THETA=0.0067;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 90366922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8436;ERATE=0.0004;THETA=0.0125;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90367266 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0074;AVGPOST=0.9973;RSQ=0.8651;ERATE=0.0006;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90367305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8928;ERATE=0.0003;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90367333 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8385;ERATE=0.0004;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90367433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5993;ERATE=0.0003;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90367464 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.976;LDAF=0.0833;AVGPOST=0.9938;RSQ=0.9708;ERATE=0.0003;THETA=0.0010;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 90367602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5908;ERATE=0.0004;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90368022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0092;AVGPOST=0.9981;RSQ=0.9242;ERATE=0.0004;THETA=0.0014;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90368078 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8409;ERATE=0.0004;THETA=0.0090;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90368126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0155;AVGPOST=0.9968;RSQ=0.9144;ERATE=0.0006;THETA=0.0028;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90368127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0059;AVGPOST=0.9973;RSQ=0.7927;ERATE=0.0005;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90368284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.968;LDAF=0.2869;AVGPOST=0.9839;RSQ=0.9730;ERATE=0.0013;THETA=0.0006;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 90368422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.8004;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90368461 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90368499 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90368512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8301;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90368547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90368600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9730;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90368602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0031;AVGPOST=0.9978;RSQ=0.7174;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90368867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9849;ERATE=0.0003;THETA=0.0016;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90368927 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90368977 . TG T 1959 PASS INDEL;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0157;AVGPOST=0.9980;RSQ=0.9532;ERATE=0.0003;THETA=0.0010;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90369211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9657;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90369269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8888;ERATE=0.0003;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90369660 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90369812 . CA C 1945 PASS INDEL;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0158;AVGPOST=0.9975;RSQ=0.9402;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90369829 . G GT 172 PASS INDEL;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6200;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90369834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5951;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90369911 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90370038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.7007;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90370167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90370432 . A AT 152 PASS INDEL;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90370451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90370452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8622;ERATE=0.0003;THETA=0.0052;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90370476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9434;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90370537 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9275;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90370578 . C CTTTT 189 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.7099;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90370808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0893;AVGPOST=0.9985;RSQ=0.9934;ERATE=0.0004;THETA=0.0007;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 90370924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90370946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8871;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90370970 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90371175 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90371234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1016;AVGPOST=0.9980;RSQ=0.9914;ERATE=0.0005;THETA=0.0023;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 90371295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5756;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90371436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90371437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90371474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90371512 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90371528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7166;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90371532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9057;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90371647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90371652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9129;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90371667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1817;AVGPOST=0.9975;RSQ=0.9941;ERATE=0.0005;THETA=0.0006;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 90371714 . C CT 177 PASS INDEL;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7541;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90371737 . TA T 42 PASS INDEL;BAVGPOST=0.998;BRSQ=0.669;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4300;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90371771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6231;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90371776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.3520;AVGPOST=0.9937;RSQ=0.9899;ERATE=0.0003;THETA=0.0005;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 90371782 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0655;AVGPOST=0.9970;RSQ=0.9806;ERATE=0.0003;THETA=0.0010;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 90371789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6091;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90371846 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90371913 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1838;AVGPOST=0.9958;RSQ=0.9907;ERATE=0.0005;THETA=0.0005;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 90371924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5180;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90371930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90372073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5090;ERATE=0.0004;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90372289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7923;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90372347 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9213;ERATE=0.0003;THETA=0.0045;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90372352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0121;AVGPOST=0.9995;RSQ=0.9808;ERATE=0.0003;THETA=0.0079;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90372408 . GC G 1901 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0101;AVGPOST=0.9989;RSQ=0.9522;ERATE=0.0005;THETA=0.0059;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90372443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9800;ERATE=0.0003;THETA=0.0026;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90372486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90372491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90372587 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0293;AVGPOST=0.9977;RSQ=0.9725;ERATE=0.0012;THETA=0.0009;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 90372596 . AT A 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90372656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0123;AVGPOST=0.9993;RSQ=0.9770;ERATE=0.0003;THETA=0.0015;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90372668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90372691 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5935;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90372705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90372717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2864;AVGPOST=0.9948;RSQ=0.9901;ERATE=0.0006;THETA=0.0038;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 90372742 rs72177980 C CT 3897 PASS INDEL;BAVGPOST=0.703;BRSQ=0.124;LDAF=0.7404;AVGPOST=0.6975;RSQ=0.3415;ERATE=0.0250;THETA=0.0007;AC=1816;AN=2184 GT:DS:GL:BD 0.83150184 1
1 90372770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.941;LDAF=0.1178;AVGPOST=0.9885;RSQ=0.9569;ERATE=0.0008;THETA=0.0007;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 90373030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6611;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90373065 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7736;ERATE=0.0003;THETA=0.0042;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90373067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2852;AVGPOST=0.9972;RSQ=0.9949;ERATE=0.0005;THETA=0.0009;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 90373084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9375;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90373095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0050;AVGPOST=0.9983;RSQ=0.8894;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90373141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0240;AVGPOST=0.9992;RSQ=0.9856;ERATE=0.0003;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 90373443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8394;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90373449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1097;AVGPOST=0.9964;RSQ=0.9864;ERATE=0.0003;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 90373501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9918;ERATE=0.0003;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90373625 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0548;AVGPOST=0.9969;RSQ=0.9757;ERATE=0.0003;THETA=0.0019;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 90373674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2859;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0005;THETA=0.0009;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 90373758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7309;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90373813 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0053;AVGPOST=0.9991;RSQ=0.9241;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90373861 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7111;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90373919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9706;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90373989 . T TC 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90374042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9344;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90374083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0684;AVGPOST=0.9991;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 90374116 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8225;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90374281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8091;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90374301 . CCAG C 22 PASS INDEL;BAVGPOST=0.997;BRSQ=0.656;LDAF=0.0117;AVGPOST=0.9842;RSQ=0.4730;ERATE=0.0025;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90374395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.7162;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90374424 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4930;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90374589 . GTGTGTGTC G 708 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8328;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90374597 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.767;LDAF=0.0088;AVGPOST=0.9940;RSQ=0.7370;ERATE=0.0026;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90374605 . CTG C 12786 PASS INDEL;BAVGPOST=0.940;BRSQ=0.321;LDAF=0.9153;AVGPOST=0.8840;RSQ=0.4030;ERATE=0.0176;THETA=0.0004;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 90374623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0126;AVGPOST=0.9992;RSQ=0.9788;ERATE=0.0004;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90374844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5521;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90374851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6496;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90374867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90374907 . GT G 431 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0048;AVGPOST=0.9973;RSQ=0.7602;ERATE=0.0005;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90374963 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8607;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90374983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0226;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0003;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 90375062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9813;ERATE=0.0004;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90375138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0048;AVGPOST=0.9930;RSQ=0.4489;ERATE=0.0010;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90375141 . T TG 23 PASS INDEL;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0045;AVGPOST=0.9953;RSQ=0.5568;ERATE=0.0009;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90375191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0156;AVGPOST=0.9950;RSQ=0.8799;ERATE=0.0005;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90375207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.898;BRSQ=0.754;LDAF=0.2379;AVGPOST=0.9492;RSQ=0.8976;ERATE=0.0035;THETA=0.0002;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 90375222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.328;LDAF=0.0055;AVGPOST=0.9944;RSQ=0.5888;ERATE=0.0009;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90375271 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0048;AVGPOST=0.9988;RSQ=0.9077;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90375545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90375680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7349;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90375703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0069;AVGPOST=0.9970;RSQ=0.8493;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90375852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2762;AVGPOST=0.9940;RSQ=0.9888;ERATE=0.0028;THETA=0.0008;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 90375975 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0108;AVGPOST=0.9995;RSQ=0.9805;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90375978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7721;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90376109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.723;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8340;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90376144 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90376146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90376165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9407;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90376217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90376407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9925;ERATE=0.0003;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90376512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90376631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90376861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0131;AVGPOST=0.9993;RSQ=0.9779;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90376893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5313;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90376984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5888;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90376985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0682;AVGPOST=0.9991;RSQ=0.9939;ERATE=0.0004;THETA=0.0006;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 90377022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0154;AVGPOST=0.9989;RSQ=0.9670;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90377087 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9489;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90377092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90377169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0003;THETA=0.0020;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90377253 rs57430498 C CT 9941 PASS INDEL;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2881;AVGPOST=0.9973;RSQ=0.9949;ERATE=0.0006;THETA=0.0005;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 90377273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90377281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9173;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90377363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8996;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90377520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8148;ERATE=0.0017;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90377526 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6359;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90377712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0003;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90377786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7119;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90377947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0215;AVGPOST=0.9968;RSQ=0.9445;ERATE=0.0008;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 90377961 . AC A 228 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8816;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90377980 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8732;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90377998 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7657;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90378091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2840;AVGPOST=0.9934;RSQ=0.9885;ERATE=0.0006;THETA=0.0006;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 90378164 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8310;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90378200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8462;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90378244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8491;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90378328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90378346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.7197;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90378350 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.5918;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90378361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7527;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90378416 . CCA C 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3951;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90378488 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9988;RSQ=0.9757;ERATE=0.0004;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90378528 . T TA 728 PASS INDEL;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0082;AVGPOST=0.9975;RSQ=0.8693;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90378608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90378609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0127;AVGPOST=0.9995;RSQ=0.9834;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90378691 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0062;AVGPOST=0.9986;RSQ=0.9157;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90378848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6782;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90378891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90378992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9098;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90379027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5285;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90379190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6536;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90379382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90379565 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9184;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90379625 . TA T 266 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8441;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90379653 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0112;AVGPOST=0.9987;RSQ=0.9593;ERATE=0.0005;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90379717 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8484;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90379968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0711;AVGPOST=0.9884;RSQ=0.9361;ERATE=0.0024;THETA=0.0002;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 90380112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.2731;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0004;THETA=0.0007;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 90380356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.953;LDAF=0.0891;AVGPOST=0.9872;RSQ=0.9381;ERATE=0.0006;THETA=0.0007;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 90380417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7043;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90380574 . ACT A 243 PASS INDEL;BAVGPOST=0.988;BRSQ=0.552;LDAF=0.0173;AVGPOST=0.9806;RSQ=0.5698;ERATE=0.0031;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90380589 . G GT 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0036;AVGPOST=0.9966;RSQ=0.6264;ERATE=0.0009;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90380841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90380873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7343;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90380946 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90381031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3526;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90381036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8275;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90381196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.782;LDAF=0.0083;AVGPOST=0.9969;RSQ=0.8538;ERATE=0.0004;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90381223 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5288;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90381235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0315;AVGPOST=0.9975;RSQ=0.9676;ERATE=0.0004;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 90381237 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0205;AVGPOST=0.9991;RSQ=0.9860;ERATE=0.0003;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 90381280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0097;AVGPOST=0.9989;RSQ=0.9566;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90381378 . C CCATTT 563 PASS INDEL;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7373;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90381527 . CA C 213 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8426;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90381640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90381838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9259;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90381893 . TTAAA T 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90382070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8392;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90382120 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90382167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0167;AVGPOST=0.9996;RSQ=0.9901;ERATE=0.0003;THETA=0.0009;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90382208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90382227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0126;AVGPOST=0.9984;RSQ=0.9547;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90382416 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0230;AVGPOST=0.9991;RSQ=0.9857;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 90382423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5764;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90382428 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5465;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90382482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90382490 . TC T 602 PASS INDEL;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0063;AVGPOST=0.9980;RSQ=0.8613;ERATE=0.0004;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90382674 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5958;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90382725 . G GA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5933;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90382726 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7895;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90382751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9655;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90382815 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90382832 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90382905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90382950 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0623;AVGPOST=0.9989;RSQ=0.9923;ERATE=0.0003;THETA=0.0005;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 90383184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8979;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90383238 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0122;AVGPOST=0.9993;RSQ=0.9780;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90383240 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0082;AVGPOST=0.9991;RSQ=0.9596;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90383263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0127;AVGPOST=0.9987;RSQ=0.9617;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90383277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90383293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0128;AVGPOST=0.9988;RSQ=0.9664;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90383344 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7413;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90383382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8723;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90383424 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90383604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9658;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90383786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0245;AVGPOST=0.9976;RSQ=0.9638;ERATE=0.0003;THETA=0.0012;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 90383951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2876;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0003;THETA=0.0007;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 90384048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0081;AVGPOST=0.9983;RSQ=0.9167;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90384052 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90384101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2878;AVGPOST=0.9977;RSQ=0.9957;ERATE=0.0003;THETA=0.0011;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 90384129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90384265 . GA G 142 PASS INDEL;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0023;AVGPOST=0.9971;RSQ=0.4763;ERATE=0.0010;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90384342 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0168;AVGPOST=0.9989;RSQ=0.9738;ERATE=0.0004;THETA=0.0142;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90384399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9623;ERATE=0.0003;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90384439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0071;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90384712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8564;ERATE=0.0003;THETA=0.0091;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90384894 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9295;ERATE=0.0003;THETA=0.0123;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90384976 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8420;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90385030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9600;ERATE=0.0005;THETA=0.0027;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90385150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5318;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90385159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90385189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0003;THETA=0.0168;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90385199 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8853;ERATE=0.0003;THETA=0.0033;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90385205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0118;AVGPOST=0.9977;RSQ=0.9211;ERATE=0.0010;THETA=0.0075;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90385206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.898;LDAF=0.0105;AVGPOST=0.9967;RSQ=0.8675;ERATE=0.0025;THETA=0.0054;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90385259 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90385269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8562;ERATE=0.0003;THETA=0.0075;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90385320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8501;ERATE=0.0004;THETA=0.0030;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90385585 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90385641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4861;ERATE=0.0003;THETA=0.0098;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90385866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6423;ERATE=0.0004;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90385900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0726;AVGPOST=0.9904;RSQ=0.9473;ERATE=0.0004;THETA=0.0032;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 90385951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8237;ERATE=0.0004;THETA=0.0065;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90386017 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0024;AVGPOST=0.9972;RSQ=0.5372;ERATE=0.0007;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90386056 . T TGA 2335 PASS INDEL;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0115;AVGPOST=0.9957;RSQ=0.8483;ERATE=0.0009;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90386151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90386156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.960;LDAF=0.0576;AVGPOST=0.9897;RSQ=0.9404;ERATE=0.0008;THETA=0.0024;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 90386192 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6720;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90386223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0037;AVGPOST=0.9971;RSQ=0.7190;ERATE=0.0005;THETA=0.0031;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90386248 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0054;AVGPOST=0.9969;RSQ=0.7877;ERATE=0.0005;THETA=0.0019;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90386311 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.564;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0005;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90386449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90386515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8730;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90386551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5052;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90386596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7912;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90386831 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0659;AVGPOST=0.9952;RSQ=0.9687;ERATE=0.0005;THETA=0.0012;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 90386998 . TA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90387054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.906;LDAF=0.1098;AVGPOST=0.9717;RSQ=0.8991;ERATE=0.0018;THETA=0.0028;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 90387079 . TTTTG T 996 PASS INDEL;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0164;AVGPOST=0.9949;RSQ=0.8811;ERATE=0.0004;THETA=0.0032;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90387146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4978;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90387161 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0006;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90387198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0275;AVGPOST=0.9984;RSQ=0.9767;ERATE=0.0004;THETA=0.0022;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 90387387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8864;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90387392 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9531;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90387581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90387635 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.876;LDAF=0.0401;AVGPOST=0.9817;RSQ=0.8144;ERATE=0.0036;THETA=0.0010;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 90387738 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.1261;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90387745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9674;ERATE=0.0003;THETA=0.0014;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90387774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0052;AVGPOST=0.9980;RSQ=0.8276;ERATE=0.0006;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90387813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5726;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90387895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0265;AVGPOST=0.9992;RSQ=0.9891;ERATE=0.0003;THETA=0.0060;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 90387946 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8705;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90387971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0200;AVGPOST=0.9979;RSQ=0.9616;ERATE=0.0003;THETA=0.0016;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 90388032 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90388160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.935;LDAF=0.0246;AVGPOST=0.9957;RSQ=0.9341;ERATE=0.0003;THETA=0.0028;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 90388187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.967;LDAF=0.1073;AVGPOST=0.9896;RSQ=0.9610;ERATE=0.0004;THETA=0.0006;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 90388188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90388228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0072;AVGPOST=0.9978;RSQ=0.8825;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90388250 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90388259 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7925;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90388305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8493;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90388316 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.868;LDAF=0.0197;AVGPOST=0.9942;RSQ=0.8889;ERATE=0.0005;THETA=0.0015;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 90388524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9014;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90388606 . G GA 5743 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0320;AVGPOST=0.9987;RSQ=0.9837;ERATE=0.0003;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 90388607 . G GT 5959 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0319;AVGPOST=0.9988;RSQ=0.9849;ERATE=0.0003;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 90388620 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5353;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90388635 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9870;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90388682 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0851;AVGPOST=0.9974;RSQ=0.9904;ERATE=0.0003;THETA=0.0007;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 90388774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9138;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90388793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90388861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0078;AVGPOST=0.9984;RSQ=0.9224;ERATE=0.0003;THETA=0.0014;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90388880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90388972 . TG T 75 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4786;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90389042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90389099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8100;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90389110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8644;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90389226 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90389305 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9749;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90389381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90389457 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0066;AVGPOST=0.9965;RSQ=0.8066;ERATE=0.0003;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90389472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.8989;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90389473 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90389692 . AACAG A 193 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90389819 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90390014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8570;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90390073 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0032;AVGPOST=0.9956;RSQ=0.5215;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90390286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9986;RSQ=0.8925;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90390302 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90390526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9502;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90390529 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90390568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9592;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90390663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8867;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90390808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90390866 . C CTCAGGGA 458 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6543;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90390878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.0983;AVGPOST=0.9966;RSQ=0.9886;ERATE=0.0004;THETA=0.0015;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 90390912 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90390945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0081;AVGPOST=0.9969;RSQ=0.8498;ERATE=0.0004;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90390983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90391002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0056;AVGPOST=0.9992;RSQ=0.9322;ERATE=0.0004;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90391118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90391123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90391134 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7848;ERATE=0.0005;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90391151 . AAAAT A 660 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8096;ERATE=0.0003;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90391388 . C CT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5559;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90391391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90391493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.962;LDAF=0.0466;AVGPOST=0.9940;RSQ=0.9489;ERATE=0.0005;THETA=0.0018;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 90391496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9149;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90391574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0015;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90391957 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7177;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90392093 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90392215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9248;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90392337 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7558;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90392449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90392461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9595;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90392549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90392627 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9394;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90392726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0293;AVGPOST=0.9925;RSQ=0.8951;ERATE=0.0005;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 90392880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90393027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8367;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90393057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0171;AVGPOST=0.9969;RSQ=0.9274;ERATE=0.0004;THETA=0.0010;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90393169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90393343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9566;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90393424 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5443;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90393433 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9419;ERATE=0.0007;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90393502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90393584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6695;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90393651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0004;THETA=0.0011;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90393703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0044;AVGPOST=0.9980;RSQ=0.7951;ERATE=0.0007;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90393764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0086;AVGPOST=0.9973;RSQ=0.8631;ERATE=0.0005;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90393819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4107;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90393876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4912;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90393879 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0121;AVGPOST=0.9993;RSQ=0.9746;ERATE=0.0005;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90394075 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.8924;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90394135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90394679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9991;RSQ=0.9843;ERATE=0.0003;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 90394695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7272;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90394744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7914;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90394806 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0066;AVGPOST=0.9989;RSQ=0.9335;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90394838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90394882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90394894 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9551;ERATE=0.0003;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90395008 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90395100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90395167 . AC A 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90395198 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90395226 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90395274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9706;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90395331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6910;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90395374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7613;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90395375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5046;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90395490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90395557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8935;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90395590 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8782;ERATE=0.0004;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90395625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5045;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90395664 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8622;ERATE=0.0005;THETA=0.0033;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90395704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90395852 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0060;AVGPOST=0.9993;RSQ=0.9436;ERATE=0.0004;THETA=0.0023;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90395897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8900;ERATE=0.0004;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90395980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7564;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90396046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90396080 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8539;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90396174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90396176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9995;RSQ=0.9896;ERATE=0.0003;THETA=0.0019;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 90396177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90396736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8746;ERATE=0.0004;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90396764 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9170;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90396815 . C CG 497 PASS INDEL;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0131;AVGPOST=0.9988;RSQ=0.9587;ERATE=0.0005;THETA=0.0020;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90397047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0050;AVGPOST=0.9978;RSQ=0.8113;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90397132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8574;ERATE=0.0005;THETA=0.0044;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90397254 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4710;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90397273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0350;AVGPOST=0.9865;RSQ=0.8539;ERATE=0.0004;THETA=0.0010;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 90397513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0847;AVGPOST=0.9963;RSQ=0.9843;ERATE=0.0005;THETA=0.0008;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 90397531 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0151;AVGPOST=0.9976;RSQ=0.9309;ERATE=0.0004;THETA=0.0022;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90397556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4947;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90397740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90397748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90397760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8907;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90397786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6992;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90397810 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7648;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90397897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0003;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90398121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90398215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90398216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7610;ERATE=0.0010;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90398273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90398309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90398372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90398421 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90398574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90398839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90398846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90398847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9998;RSQ=0.8924;ERATE=0.0004;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90398960 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90399133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90399197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.8942;ERATE=0.0004;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90399263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90399460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90399869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0003;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90400023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90400256 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90400338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90400729 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90400944 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90400984 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90401137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90401231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90401297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0013;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90401322 . CAGAG C 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3760;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90401378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90401405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.0912;AVGPOST=0.9951;RSQ=0.9822;ERATE=0.0011;THETA=0.0008;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 90401494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90401511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7264;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90401566 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8633;ERATE=0.0005;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90401575 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90401622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9323;ERATE=0.0007;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90401695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90401765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0757;AVGPOST=0.9904;RSQ=0.9479;ERATE=0.0006;THETA=0.0015;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 90402050 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0058;AVGPOST=0.9988;RSQ=0.9108;ERATE=0.0004;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90402111 . GA G 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0025;AVGPOST=0.9971;RSQ=0.6392;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90402116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0345;AVGPOST=0.9929;RSQ=0.9171;ERATE=0.0006;THETA=0.0010;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 90402278 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9361;ERATE=0.0004;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90402293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90402418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7433;ERATE=0.0009;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90402459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90402471 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.8451;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90402563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9471;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90402630 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9763;ERATE=0.0004;THETA=0.0014;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90402664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5981;ERATE=0.0005;THETA=0.0047;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90402725 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9670;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90402764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90402860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9019;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90402984 . TAATTAC T 6245 PASS INDEL;BAVGPOST=0.996;BRSQ=0.954;LDAF=0.0326;AVGPOST=0.9875;RSQ=0.8631;ERATE=0.0006;THETA=0.0009;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 90403101 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4685;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90403116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.512;LDAF=0.0092;AVGPOST=0.9849;RSQ=0.4143;ERATE=0.0034;THETA=0.0056;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90403131 . A AC 179 PASS INDEL;BAVGPOST=0.997;BRSQ=0.757;LDAF=0.0107;AVGPOST=0.9878;RSQ=0.5337;ERATE=0.0030;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90403176 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90403335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90403566 . TAAACA T 121 PASS INDEL;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.6660;ERATE=0.0018;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90403832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0023;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90403889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7634;ERATE=0.0003;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90403939 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90403989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9257;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90404064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9787;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90404248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9302;ERATE=0.0004;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90404328 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90404454 . TTAG T 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0025;AVGPOST=0.9972;RSQ=0.5861;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90404460 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90404537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90404636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90404762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90404787 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9741;ERATE=0.0003;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90405190 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0753;AVGPOST=0.9947;RSQ=0.9733;ERATE=0.0005;THETA=0.0008;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 90405320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90405371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5887;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90405394 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7850;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90405440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90405474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90405538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7769;ERATE=0.0009;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90405782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8123;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90405879 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90405936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0079;AVGPOST=0.9964;RSQ=0.8295;ERATE=0.0004;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90405946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0065;AVGPOST=0.9981;RSQ=0.8893;ERATE=0.0004;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90405977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.756;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.6129;ERATE=0.0005;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90406037 rs113854755 GC G 171 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0039;AVGPOST=0.9980;RSQ=0.7940;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90406160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90406171 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8892;ERATE=0.0003;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90406184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8735;ERATE=0.0003;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90406217 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90406294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0599;AVGPOST=0.9987;RSQ=0.9924;ERATE=0.0003;THETA=0.0011;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 90406509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0581;AVGPOST=0.9979;RSQ=0.9874;ERATE=0.0003;THETA=0.0020;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 90406510 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8364;ERATE=0.0006;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90406524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8342;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90406538 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.8978;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90406660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90406661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7976;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90406699 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90406751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7848;ERATE=0.0003;THETA=0.0055;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90406814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8493;ERATE=0.0005;THETA=0.0063;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90406821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7988;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90406859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90406859 . C CG 92 PASS INDEL;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.4528;ERATE=0.0008;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90406866 rs113730540 GA G 7923 PASS INDEL;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.0583;AVGPOST=0.9973;RSQ=0.9833;ERATE=0.0005;THETA=0.0037;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 90406869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90406884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0120;AVGPOST=0.9996;RSQ=0.9851;ERATE=0.0003;THETA=0.0018;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90407002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90407148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6066;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90407181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7363;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90407248 . A AT 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4249;ERATE=0.0006;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90407332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4977;ERATE=0.0006;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90407598 rs72010331 AAAATG A 711 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0072;AVGPOST=0.9992;RSQ=0.9528;ERATE=0.0004;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90407599 rs72010331 AAATG A 324 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0101;AVGPOST=0.9988;RSQ=0.9501;ERATE=0.0003;THETA=0.0026;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90407626 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6966;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90407693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90407963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90408068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90408115 . CA C 425 PASS INDEL;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8583;ERATE=0.0006;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90408193 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7230;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90408428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0157;AVGPOST=0.9968;RSQ=0.9391;ERATE=0.0004;THETA=0.0014;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90408681 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90408751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90408802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6983;ERATE=0.0005;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90408839 . TAGAG T 348 PASS INDEL;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6749;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90408900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0047;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90409025 . TC T 1282 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0073;AVGPOST=0.9998;RSQ=0.9850;ERATE=0.0003;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90409051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6997;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90409166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90409206 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.455;LDAF=0.0117;AVGPOST=0.9818;RSQ=0.3586;ERATE=0.0044;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90409413 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9067;ERATE=0.0003;THETA=0.0031;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90409416 . AC A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5798;ERATE=0.0007;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90409486 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90409801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8977;ERATE=0.0004;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90409903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90410171 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0494;AVGPOST=0.9973;RSQ=0.9822;ERATE=0.0009;THETA=0.0014;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 90410196 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0049;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90410339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7682;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90410363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90410404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8916;ERATE=0.0003;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90410410 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8353;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90410571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90410682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0127;AVGPOST=0.9977;RSQ=0.9170;ERATE=0.0004;THETA=0.0041;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90410887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90410964 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9885;ERATE=0.0004;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90411010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90411011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9648;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90411347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9015;ERATE=0.0003;THETA=0.0052;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90411395 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90411607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7470;ERATE=0.0004;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90412046 . AAAAC A 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0067;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90412072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8592;ERATE=0.0004;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90412091 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90412236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9823;ERATE=0.0003;THETA=0.0020;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90412349 . TAACAC T 235 PASS INDEL;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8043;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90412394 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8483;ERATE=0.0004;THETA=0.0066;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90412655 . C CG 8 PASS INDEL;BAVGPOST=0.993;BRSQ=0.343;LDAF=0.0109;AVGPOST=0.9846;RSQ=0.4159;ERATE=0.0031;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90412658 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4653;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90412662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0069;AVGPOST=0.9957;RSQ=0.7735;ERATE=0.0004;THETA=0.0040;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90412761 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9988;RSQ=0.2456;ERATE=0.0004;THETA=0.0034;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90412801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8576;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90412914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.0775;AVGPOST=0.9938;RSQ=0.9718;ERATE=0.0005;THETA=0.0031;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 90412944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.688;LDAF=0.0060;AVGPOST=0.9948;RSQ=0.6891;ERATE=0.0004;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90412991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90413002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7868;ERATE=0.0004;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90413066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7213;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90413132 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8660;ERATE=0.0005;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90413237 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9311;ERATE=0.0004;THETA=0.0081;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90413346 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.943;LDAF=0.0833;AVGPOST=0.9708;RSQ=0.8760;ERATE=0.0024;THETA=0.0037;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 90413375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.912;LDAF=0.1670;AVGPOST=0.9325;RSQ=0.8286;ERATE=0.0035;THETA=0.0085;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 90413464 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.643;LDAF=0.0101;AVGPOST=0.9930;RSQ=0.7466;ERATE=0.0006;THETA=0.0138;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90413466 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.845;LDAF=0.0834;AVGPOST=0.9723;RSQ=0.8607;ERATE=0.0012;THETA=0.0010;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 90413543 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3593;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90413546 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.621;LDAF=0.0061;AVGPOST=0.9938;RSQ=0.6127;ERATE=0.0008;THETA=0.0109;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90413563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6897;ERATE=0.0007;THETA=0.0101;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90413599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.773;LDAF=0.0091;AVGPOST=0.9957;RSQ=0.7968;ERATE=0.0018;THETA=0.0037;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90413611 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8452;ERATE=0.0004;THETA=0.0048;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90413657 . ATG A 1072 PASS INDEL;BAVGPOST=0.953;BRSQ=0.777;LDAF=0.0849;AVGPOST=0.9691;RSQ=0.8781;ERATE=0.0006;THETA=0.0057;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 90413658 . TG T 4794 PASS INDEL;BAVGPOST=0.987;BRSQ=0.960;LDAF=0.1230;AVGPOST=0.9902;RSQ=0.9716;ERATE=0.0003;THETA=0.0069;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 90413659 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1265;AVGPOST=0.9940;RSQ=0.9835;ERATE=0.0003;THETA=0.0037;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 90413661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.1404;AVGPOST=0.9941;RSQ=0.9855;ERATE=0.0006;THETA=0.0008;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 90413661 . T TC 8066 PASS INDEL;BAVGPOST=0.989;BRSQ=0.967;LDAF=0.1279;AVGPOST=0.9897;RSQ=0.9727;ERATE=0.0005;THETA=0.0051;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 90413692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9250;ERATE=0.0003;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90413696 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1285;AVGPOST=0.9949;RSQ=0.9841;ERATE=0.0029;THETA=0.0019;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 90413719 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90413766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7891;ERATE=0.0003;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90413777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0093;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90413796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0048;AVGPOST=0.9979;RSQ=0.8273;ERATE=0.0018;THETA=0.0027;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90413922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0053;AVGPOST=0.9973;RSQ=0.7955;ERATE=0.0011;THETA=0.0054;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90413966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9688;ERATE=0.0004;THETA=0.0068;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90414032 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7980;ERATE=0.0008;THETA=0.0189;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90414145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90414211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0094;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90414422 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0085;AVGPOST=0.9993;RSQ=0.9622;ERATE=0.0004;THETA=0.0018;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90414444 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.3917;ERATE=0.0004;THETA=0.0058;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90414472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1133;AVGPOST=0.9940;RSQ=0.9779;ERATE=0.0003;THETA=0.0004;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 90414510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0159;AVGPOST=0.9980;RSQ=0.9520;ERATE=0.0003;THETA=0.0014;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90414673 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0471;AVGPOST=0.9911;RSQ=0.9261;ERATE=0.0005;THETA=0.0052;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 90414697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4298;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90414706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0029;AVGPOST=0.9965;RSQ=0.5765;ERATE=0.0004;THETA=0.0104;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90414712 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0059;AVGPOST=0.9974;RSQ=0.8291;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90414796 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.3630;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90414876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0041;AVGPOST=0.9953;RSQ=0.5316;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90415234 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90415296 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90415319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.874;LDAF=0.0284;AVGPOST=0.9936;RSQ=0.9109;ERATE=0.0007;THETA=0.0011;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 90415481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.964;LDAF=0.5115;AVGPOST=0.9547;RSQ=0.9423;ERATE=0.0026;THETA=0.0019;AC=1107;AN=2184 GT:DS:GL:BD 0.50686812 1
1 90415492 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7105;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90415579 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5729;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90415645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90415914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90416296 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90416510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6049;ERATE=0.0007;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90416575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.794;LDAF=0.0154;AVGPOST=0.9913;RSQ=0.7896;ERATE=0.0009;THETA=0.0019;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90416787 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.674;LDAF=0.0096;AVGPOST=0.9884;RSQ=0.5342;ERATE=0.0027;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90416936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.942;LDAF=0.0133;AVGPOST=0.9913;RSQ=0.7255;ERATE=0.0011;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90416963 . A AC 15 PASS INDEL;BAVGPOST=0.996;BRSQ=0.598;LDAF=0.0096;AVGPOST=0.9909;RSQ=0.6162;ERATE=0.0006;THETA=0.0035;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90416987 rs11298689 CA C 153 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0118;AVGPOST=0.9919;RSQ=0.7333;ERATE=0.0008;THETA=0.0015;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90417037 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.4172;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90417310 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90417341 . GTAA G 608 PASS INDEL;BAVGPOST=0.997;BRSQ=0.877;LDAF=0.0094;AVGPOST=0.9961;RSQ=0.8164;ERATE=0.0004;THETA=0.0013;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90417380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7593;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90417416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.6871;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90417421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7898;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90417441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8396;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90417676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9398;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90417751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9991;RSQ=0.2072;ERATE=0.0003;THETA=0.0011;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90417900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90417917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9066;ERATE=0.0003;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90417924 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8659;ERATE=0.0016;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90418015 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8575;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90418085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9302;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90418327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90418335 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9118;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90418482 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0142;AVGPOST=0.9973;RSQ=0.9232;ERATE=0.0007;THETA=0.0029;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90418508 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7358;ERATE=0.0004;THETA=0.0042;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90418667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0082;AVGPOST=0.9983;RSQ=0.9220;ERATE=0.0004;THETA=0.0016;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90418691 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9027;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90418895 . CTGAT C 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7897;ERATE=0.0004;THETA=0.0041;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90418972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0979;AVGPOST=0.9950;RSQ=0.9795;ERATE=0.0006;THETA=0.0019;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 90418985 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5093;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90419136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90419153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8310;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90419200 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6596;ERATE=0.0004;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90419255 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8307;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90419302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0039;AVGPOST=0.9972;RSQ=0.7331;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90419304 . TTTTAC T 606 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7142;ERATE=0.0004;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90419309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6353;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90419529 . TG T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90419699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0065;AVGPOST=0.9980;RSQ=0.8728;ERATE=0.0005;THETA=0.0020;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90419783 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90419819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.858;LDAF=0.9947;AVGPOST=0.9974;RSQ=0.8486;ERATE=0.0004;THETA=0.0005;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 90419891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0059;AVGPOST=0.9947;RSQ=0.6622;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90419991 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8612;ERATE=0.0004;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90420060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9687;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90420080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90420180 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90420394 . AG A 108 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0035;AVGPOST=0.9968;RSQ=0.6871;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90420509 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8452;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90420510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7437;ERATE=0.0006;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90420516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6345;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90420728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90420730 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90420747 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90420828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0109;AVGPOST=0.9989;RSQ=0.9638;ERATE=0.0005;THETA=0.0015;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90420833 . AG A 334 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9979;RSQ=0.8563;ERATE=0.0005;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90420851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90420920 . G GA 200 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0047;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90420997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7320;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90421137 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90421170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0072;AVGPOST=0.9984;RSQ=0.9161;ERATE=0.0005;THETA=0.0022;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90421232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90421281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8566;ERATE=0.0011;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90421354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0176;AVGPOST=0.9992;RSQ=0.9813;ERATE=0.0004;THETA=0.0013;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 90421449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9337;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90421512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90421622 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90421798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0053;AVGPOST=0.9955;RSQ=0.6550;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90421884 rs111906391 CA C 329 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9195;ERATE=0.0004;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90421987 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0712;AVGPOST=0.9954;RSQ=0.9741;ERATE=0.0003;THETA=0.0006;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 90421988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90422214 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0054;AVGPOST=0.9989;RSQ=0.9149;ERATE=0.0006;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90422408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90422415 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9047;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90422511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0074;AVGPOST=0.9985;RSQ=0.9236;ERATE=0.0003;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90422596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90422824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.8168;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90423030 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0082;AVGPOST=0.9996;RSQ=0.9804;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90423039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.1157;AVGPOST=0.9968;RSQ=0.9892;ERATE=0.0003;THETA=0.0015;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 90423163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.8062;ERATE=0.0006;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90423191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90423473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0062;AVGPOST=0.9981;RSQ=0.8849;ERATE=0.0008;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90423495 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6800;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90423507 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90423740 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7806;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90424050 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6015;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90424077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0057;AVGPOST=0.9993;RSQ=0.9454;ERATE=0.0005;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90424130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9198;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90424391 . T TA 38 PASS INDEL;BAVGPOST=0.992;BRSQ=0.550;LDAF=0.0175;AVGPOST=0.9792;RSQ=0.5097;ERATE=0.0063;THETA=0.0015;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90424497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5774;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90424602 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0076;AVGPOST=0.9967;RSQ=0.8245;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90424700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5253;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90424701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9767;ERATE=0.0004;THETA=0.0033;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90424755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90424801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.9118;ERATE=0.0004;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90424846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90424864 . CA C 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90424957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90424963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.8041;ERATE=0.0004;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90425126 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90425245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0133;AVGPOST=0.9987;RSQ=0.9599;ERATE=0.0003;THETA=0.0018;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90425256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5627;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90425295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90425315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0005;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90425397 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90425420 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7676;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90425722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7158;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90425770 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8067;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90425802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.1649;ERATE=0.0004;THETA=0.0026;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90425925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5097;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90425944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0056;AVGPOST=0.9986;RSQ=0.9017;ERATE=0.0004;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90426150 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8445;ERATE=0.0005;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90426263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.612;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8616;ERATE=0.0004;THETA=0.0031;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90426346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1126;AVGPOST=0.9872;RSQ=0.9515;ERATE=0.0034;THETA=0.0010;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 90427178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9971;RSQ=0.7092;ERATE=0.0006;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90427507 rs113641079 GA G 867 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9990;RSQ=0.9555;ERATE=0.0004;THETA=0.0015;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90427557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90427632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0076;AVGPOST=0.9991;RSQ=0.9498;ERATE=0.0005;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90427653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9664;ERATE=0.0004;THETA=0.0013;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90427858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90427910 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8418;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90428002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9995;RSQ=0.2096;ERATE=0.0003;THETA=0.0011;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90428014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8811;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90428055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0087;AVGPOST=0.9998;RSQ=0.9908;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90428098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90428101 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0132;AVGPOST=0.9987;RSQ=0.9683;ERATE=0.0003;THETA=0.0032;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90428104 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90428205 . T TG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5298;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90428278 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.877;LDAF=0.0091;AVGPOST=0.9977;RSQ=0.8948;ERATE=0.0004;THETA=0.0015;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90428325 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0406;AVGPOST=0.9910;RSQ=0.9135;ERATE=0.0004;THETA=0.0017;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 90428471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90428483 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0117;AVGPOST=0.9983;RSQ=0.9469;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90428603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8025;ERATE=0.0005;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90428695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0093;AVGPOST=0.9991;RSQ=0.9614;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90428727 . ATC A 241 PASS INDEL;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6554;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90428806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90428840 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90429074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.1151;AVGPOST=0.9977;RSQ=0.9909;ERATE=0.0005;THETA=0.0015;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 90429109 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9983;RSQ=0.9423;ERATE=0.0003;THETA=0.0015;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90429182 rs113006661 T TAAAA 1031 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9628;ERATE=0.0005;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90429304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1183;AVGPOST=0.9970;RSQ=0.9895;ERATE=0.0005;THETA=0.0014;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 90429323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.4720;ERATE=0.0015;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90429546 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1093;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0003;THETA=0.0010;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 90429664 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0090;AVGPOST=0.9985;RSQ=0.9303;ERATE=0.0004;THETA=0.0017;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90429753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9246;ERATE=0.0003;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90429776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9285;ERATE=0.0003;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90429777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0097;AVGPOST=0.9984;RSQ=0.9333;ERATE=0.0004;THETA=0.0024;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90429805 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9107;ERATE=0.0013;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90429903 . TTTC T 154 PASS INDEL;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9200;ERATE=0.0004;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90429949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0036;AVGPOST=0.9962;RSQ=0.5713;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90429955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0064;AVGPOST=0.9977;RSQ=0.8470;ERATE=0.0004;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90430161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4672;ERATE=0.0004;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90430586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.903;LDAF=0.0634;AVGPOST=0.9921;RSQ=0.9463;ERATE=0.0005;THETA=0.0009;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 90430723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9641;ERATE=0.0004;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90430819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7882;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90430824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7252;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90430995 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90431049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7329;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90431068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8234;ERATE=0.0006;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90431217 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90431328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9585;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90431626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90431649 . TTAAC T 103 PASS INDEL;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6412;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90431832 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0090;AVGPOST=0.9990;RSQ=0.9560;ERATE=0.0003;THETA=0.0028;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90431837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.7868;ERATE=0.0007;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90431881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0095;AVGPOST=0.9979;RSQ=0.9146;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90431914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4492;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90431965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.884;LDAF=0.0150;AVGPOST=0.9945;RSQ=0.8490;ERATE=0.0009;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90432229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90432384 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.8094;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90432395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8461;ERATE=0.0005;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90432404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0123;AVGPOST=0.9991;RSQ=0.9736;ERATE=0.0003;THETA=0.0017;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90432407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90432503 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9104;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90432583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7927;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90432601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0042;AVGPOST=0.9985;RSQ=0.8711;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90432735 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0060;AVGPOST=0.9981;RSQ=0.8587;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90432865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=0.9998;RSQ=0.9853;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90433019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.490;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4067;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90433027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5994;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90433067 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9977;RSQ=0.7700;ERATE=0.0003;THETA=0.0031;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90433178 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5396;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90433195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90433206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.816;LDAF=0.0045;AVGPOST=0.9978;RSQ=0.8043;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90433229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0983;AVGPOST=0.9986;RSQ=0.9933;ERATE=0.0004;THETA=0.0011;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 90433290 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1043;AVGPOST=0.9976;RSQ=0.9890;ERATE=0.0007;THETA=0.0013;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 90433474 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90433528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0050;AVGPOST=0.9961;RSQ=0.7167;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90433543 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0053;AVGPOST=0.9977;RSQ=0.8180;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90433629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4231;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90433725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1063;AVGPOST=0.9969;RSQ=0.9890;ERATE=0.0004;THETA=0.0008;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 90433778 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90433857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9738;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90433881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8100;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90434076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1130;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0005;THETA=0.0022;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 90434099 rs111646497 T TA 13779 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1043;AVGPOST=0.9988;RSQ=0.9954;ERATE=0.0003;THETA=0.0010;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 90434152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0058;AVGPOST=0.9988;RSQ=0.9189;ERATE=0.0006;THETA=0.0031;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90434222 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0074;AVGPOST=0.9985;RSQ=0.9203;ERATE=0.0003;THETA=0.0031;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90434285 . T TTTC 5322 PASS INDEL;BAVGPOST=0.976;BRSQ=0.873;LDAF=0.1059;AVGPOST=0.9587;RSQ=0.8332;ERATE=0.0086;THETA=0.0008;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 90434286 . T TC 81 PASS INDEL;BAVGPOST=0.997;BRSQ=0.591;LDAF=0.0031;AVGPOST=0.9963;RSQ=0.4857;ERATE=0.0010;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90434518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9675;ERATE=0.0004;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90434611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6235;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90434637 . G GC 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90434753 . G GA 776 PASS INDEL;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0082;AVGPOST=0.9977;RSQ=0.8655;ERATE=0.0005;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90434785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1126;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0004;THETA=0.0008;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 90434896 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9740;ERATE=0.0004;THETA=0.0022;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90434907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0053;AVGPOST=0.9990;RSQ=0.9374;ERATE=0.0005;THETA=0.0021;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90434913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90434941 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0004;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90435017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.779;LDAF=0.0208;AVGPOST=0.9877;RSQ=0.7655;ERATE=0.0006;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90435025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4941;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90435078 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0965;AVGPOST=0.9961;RSQ=0.9808;ERATE=0.0006;THETA=0.0020;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 90435141 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1207;AVGPOST=0.9977;RSQ=0.9903;ERATE=0.0004;THETA=0.0007;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 90435155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3650;ERATE=0.0007;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90435335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6519;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90435360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7663;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90435423 . TA T 1699 PASS INDEL;BAVGPOST=0.993;BRSQ=0.956;LDAF=0.0832;AVGPOST=0.9904;RSQ=0.9530;ERATE=0.0005;THETA=0.0004;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 90435424 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.958;LDAF=0.0938;AVGPOST=0.9887;RSQ=0.9528;ERATE=0.0007;THETA=0.0006;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 90435481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0107;AVGPOST=0.9992;RSQ=0.9673;ERATE=0.0004;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90435500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7216;ERATE=0.0016;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90435537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0015;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90435601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0165;AVGPOST=0.9976;RSQ=0.9438;ERATE=0.0004;THETA=0.0035;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90435774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90435805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90435859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90435918 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90435981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9217;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90436100 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1198;AVGPOST=0.9979;RSQ=0.9925;ERATE=0.0004;THETA=0.0031;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 90436138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1184;AVGPOST=0.9961;RSQ=0.9868;ERATE=0.0007;THETA=0.0041;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 90436139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90436164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7016;ERATE=0.0004;THETA=0.0070;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90436187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0072;AVGPOST=0.9969;RSQ=0.8452;ERATE=0.0003;THETA=0.0017;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90436251 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90436456 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0081;AVGPOST=0.9984;RSQ=0.9242;ERATE=0.0007;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90436576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7425;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90436580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9068;ERATE=0.0003;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90436597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8974;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90436632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0181;AVGPOST=0.9977;RSQ=0.9587;ERATE=0.0004;THETA=0.0010;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 90436668 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0057;AVGPOST=0.9990;RSQ=0.9397;ERATE=0.0005;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90436787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90437011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90437122 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90437187 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8401;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90437381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0049;AVGPOST=0.9981;RSQ=0.8494;ERATE=0.0017;THETA=0.0057;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90437411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0829;AVGPOST=0.9984;RSQ=0.9922;ERATE=0.0004;THETA=0.0013;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 90437425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0050;AVGPOST=0.9986;RSQ=0.8860;ERATE=0.0005;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90437451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0078;AVGPOST=0.9997;RSQ=0.9812;ERATE=0.0004;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90437475 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90437654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9845;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90437683 . C CA 112 PASS INDEL;BAVGPOST=0.992;BRSQ=0.517;LDAF=0.0098;AVGPOST=0.9868;RSQ=0.4808;ERATE=0.0038;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90438142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0191;AVGPOST=0.9988;RSQ=0.9737;ERATE=0.0004;THETA=0.0026;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 90438185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5793;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90438223 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1091;AVGPOST=0.9965;RSQ=0.9864;ERATE=0.0006;THETA=0.0011;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 90438239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.789;LDAF=0.0076;AVGPOST=0.9988;RSQ=0.9310;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90438257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0069;AVGPOST=0.9984;RSQ=0.8976;ERATE=0.0005;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90438403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9762;ERATE=0.0003;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90438543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0447;AVGPOST=0.9969;RSQ=0.9716;ERATE=0.0003;THETA=0.0012;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 90438548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9996;RSQ=0.9775;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90438729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3794;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90438809 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5794;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90438839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9340;ERATE=0.0004;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90439004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90439083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9997;RSQ=0.9851;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90439253 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9987;RSQ=0.9753;ERATE=0.0003;THETA=0.0014;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 90439304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1033;AVGPOST=0.9983;RSQ=0.9928;ERATE=0.0003;THETA=0.0010;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 90439343 . G GT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90439489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9048;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90439538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0191;AVGPOST=0.9990;RSQ=0.9761;ERATE=0.0006;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 90439556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7275;ERATE=0.0017;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90439569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0098;AVGPOST=0.9971;RSQ=0.8766;ERATE=0.0005;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90439599 rs11270856 T TGGGAGGCCGAGGC 9550 PASS INDEL;BAVGPOST=0.988;BRSQ=0.808;LDAF=0.0298;AVGPOST=0.9867;RSQ=0.8396;ERATE=0.0027;THETA=0.0010;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 90439756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0051;AVGPOST=0.9969;RSQ=0.7601;ERATE=0.0004;THETA=0.0036;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90439804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5303;ERATE=0.0005;THETA=0.0069;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90439807 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0193;AVGPOST=0.9981;RSQ=0.9551;ERATE=0.0006;THETA=0.0028;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 90439828 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0192;AVGPOST=0.9990;RSQ=0.9766;ERATE=0.0005;THETA=0.0040;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 90439858 . G GA 383 PASS INDEL;BAVGPOST=0.984;BRSQ=0.562;LDAF=0.0246;AVGPOST=0.9685;RSQ=0.4703;ERATE=0.0093;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90439875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0003;THETA=0.0024;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90439888 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7183;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90439924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7121;ERATE=0.0004;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90439931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90439932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0189;AVGPOST=0.9997;RSQ=0.9933;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 90439961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0094;AVGPOST=0.9962;RSQ=0.8398;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90440050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0193;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0003;THETA=0.0015;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 90440195 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9995;RSQ=0.9888;ERATE=0.0004;THETA=0.0014;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 90440205 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7610;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90440287 . A AG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6127;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90440303 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.7015;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90440454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5254;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90440457 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90440537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9359;ERATE=0.0003;THETA=0.0036;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90440645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0216;AVGPOST=0.9979;RSQ=0.9580;ERATE=0.0011;THETA=0.0009;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 90440967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.966;LDAF=0.0601;AVGPOST=0.9922;RSQ=0.9514;ERATE=0.0005;THETA=0.0095;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 90441038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0483;AVGPOST=0.9993;RSQ=0.9934;ERATE=0.0003;THETA=0.0016;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 90441151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1582;AVGPOST=0.9979;RSQ=0.9949;ERATE=0.0003;THETA=0.0009;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 90441380 . T TC 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90441387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90441480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90441499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90441522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0482;AVGPOST=0.9993;RSQ=0.9946;ERATE=0.0003;THETA=0.0013;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 90441524 . AAG A 7012 PASS INDEL;BAVGPOST=0.995;BRSQ=0.956;LDAF=0.0493;AVGPOST=0.9934;RSQ=0.9497;ERATE=0.0012;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 90441528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9996;RSQ=0.9445;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90441554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90441600 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6305;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90441800 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8720;ERATE=0.0004;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90441822 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5817;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90441830 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9591;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90441896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0140;AVGPOST=0.9993;RSQ=0.9811;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90441922 . T TC 602 PASS INDEL;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0036;AVGPOST=0.9980;RSQ=0.7540;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90441925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0146;AVGPOST=0.9985;RSQ=0.9612;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90441950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90441966 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5113;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90441968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90441972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6127;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90442057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90442120 . A AG 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90442228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90442256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9850;AVGPOST=0.9989;RSQ=0.9687;ERATE=0.0003;THETA=0.0012;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 90442262 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8221;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90442816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7995;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90442966 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.953;LDAF=0.0639;AVGPOST=0.9931;RSQ=0.9590;ERATE=0.0007;THETA=0.0008;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 90443203 . A AT 762 PASS INDEL;BAVGPOST=0.922;BRSQ=0.442;LDAF=0.1213;AVGPOST=0.8534;RSQ=0.4128;ERATE=0.0327;THETA=0.0012;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 90443214 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.757;LDAF=0.0242;AVGPOST=0.9850;RSQ=0.7427;ERATE=0.0017;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 90443368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0152;AVGPOST=0.9984;RSQ=0.9489;ERATE=0.0005;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90443492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0042;AVGPOST=0.9976;RSQ=0.7961;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90443525 . C CA 1145 PASS INDEL;BAVGPOST=0.864;BRSQ=0.320;LDAF=0.1807;AVGPOST=0.7671;RSQ=0.3177;ERATE=0.0422;THETA=0.0017;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 90443531 rs79221246 AG A 24401 PASS INDEL;BAVGPOST=0.984;BRSQ=0.914;LDAF=0.8806;AVGPOST=0.9469;RSQ=0.7964;ERATE=0.0057;THETA=0.0008;AC=1967;AN=2184 GT:DS:GL:BD 0.90064102 1
1 90443560 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8143;ERATE=0.0007;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90443687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7273;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90443711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0200;AVGPOST=0.9982;RSQ=0.9639;ERATE=0.0003;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 90443713 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8421;AVGPOST=0.9985;RSQ=0.9955;ERATE=0.0003;THETA=0.0008;AC=1839;AN=2184 GT:DS:GL:BD 0.84203297 1
1 90443734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0186;AVGPOST=0.9993;RSQ=0.9835;ERATE=0.0003;THETA=0.0010;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 90443752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0186;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 90443781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9002;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90443844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.8422;AVGPOST=0.9984;RSQ=0.9954;ERATE=0.0004;THETA=0.0035;AC=1839;AN=2184 GT:DS:GL:BD 0.84203297 1
1 90443891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90444123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5136;ERATE=0.0009;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90444165 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0471;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0003;THETA=0.0020;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 90444273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0048;AVGPOST=0.9974;RSQ=0.7788;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90444295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9763;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90444415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9005;ERATE=0.0003;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90444533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90444646 . ATCT A 600 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0060;AVGPOST=0.9972;RSQ=0.8245;ERATE=0.0005;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90444663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90444678 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9850;AVGPOST=0.9993;RSQ=0.9779;ERATE=0.0004;THETA=0.0004;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 90444721 . TTTTC T 2308 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0120;AVGPOST=0.9995;RSQ=0.9814;ERATE=0.0003;THETA=0.0015;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90444803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0129;AVGPOST=0.9969;RSQ=0.8986;ERATE=0.0005;THETA=0.0013;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90444835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.585;LDAF=0.0038;AVGPOST=0.9968;RSQ=0.6275;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90444889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0126;AVGPOST=0.9986;RSQ=0.9496;ERATE=0.0005;THETA=0.0012;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90444924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.638;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7090;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90444953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.903;LDAF=0.0205;AVGPOST=0.9796;RSQ=0.6270;ERATE=0.0032;THETA=0.0018;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90445024 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0472;AVGPOST=0.9981;RSQ=0.9843;ERATE=0.0003;THETA=0.0021;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 90445166 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90445180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5464;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90445337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90445451 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0146;AVGPOST=0.9978;RSQ=0.9417;ERATE=0.0003;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90445455 . TTTTG T 170 PASS INDEL;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4363;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90445514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8606;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90445549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.7016;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90445611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3921;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90445652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.260;LDAF=0.0048;AVGPOST=0.9918;RSQ=0.3940;ERATE=0.0006;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90445883 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9014;ERATE=0.0004;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90445924 . G GC 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90445925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90445967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0063;AVGPOST=0.9974;RSQ=0.8562;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90446013 . GC G 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5675;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90446130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0175;AVGPOST=0.9995;RSQ=0.9859;ERATE=0.0003;THETA=0.0010;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 90446181 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6651;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90446208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.806;LDAF=0.0090;AVGPOST=0.9957;RSQ=0.8234;ERATE=0.0008;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90446231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0044;AVGPOST=0.9976;RSQ=0.8141;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90446442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9996;RSQ=0.9901;ERATE=0.0003;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 90446469 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5845;AVGPOST=0.9956;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=1277;AN=2184 GT:DS:GL:BD 0.58470696 1
1 90446567 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8539;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90446591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0057;AVGPOST=0.9965;RSQ=0.7535;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90446721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9983;RSQ=0.9263;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90446823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0040;AVGPOST=0.9976;RSQ=0.7411;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90446856 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0149;AVGPOST=0.9968;RSQ=0.9159;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90446866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0169;AVGPOST=0.9947;RSQ=0.8756;ERATE=0.0004;THETA=0.0012;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90446984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.6024;AVGPOST=0.9963;RSQ=0.9948;ERATE=0.0004;THETA=0.0004;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 90447060 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7772;ERATE=0.0004;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90447147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90447224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0106;AVGPOST=0.9964;RSQ=0.8695;ERATE=0.0006;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90447272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5516;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90447318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5767;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90447523 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3206;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90447639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3745;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90447877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1364;AVGPOST=0.9945;RSQ=0.9830;ERATE=0.0005;THETA=0.0006;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 90447900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0131;AVGPOST=0.9974;RSQ=0.9147;ERATE=0.0006;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90447918 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5977;AVGPOST=0.9947;RSQ=0.9924;ERATE=0.0009;THETA=0.0007;AC=1303;AN=2184 GT:DS:GL:BD 0.59661174 1
1 90447926 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0033;AVGPOST=0.9994;RSQ=0.9104;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90448008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0517;AVGPOST=0.9995;RSQ=0.9950;ERATE=0.0004;THETA=0.0003;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 90448020 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6722;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90448199 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9226;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90448216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90448455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6292;AVGPOST=0.9971;RSQ=0.9956;ERATE=0.0005;THETA=0.0008;AC=1374;AN=2184 GT:DS:GL:BD 0.62912089 1
1 90448495 . T TA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5958;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90448663 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0067;AVGPOST=0.9977;RSQ=0.8553;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90448803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.538;LDAF=0.0037;AVGPOST=0.9968;RSQ=0.6615;ERATE=0.0009;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90448887 rs71724709 CAG C 1116 PASS INDEL;BAVGPOST=0.996;BRSQ=0.921;LDAF=0.0184;AVGPOST=0.9986;RSQ=0.9657;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 90449012 rs79602767 G GT 166 PASS INDEL;BAVGPOST=0.996;BRSQ=0.629;LDAF=0.0034;AVGPOST=0.9965;RSQ=0.5834;ERATE=0.0009;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90449129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5321;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90449164 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9321;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90449175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0238;AVGPOST=0.9995;RSQ=0.9901;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 90449175 . CG C 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3976;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90449176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90449228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5371;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90449271 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8602;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90449290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9997;RSQ=0.9652;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90449407 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5085;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90449412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9853;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 90449424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90449437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.5902;AVGPOST=0.9954;RSQ=0.9929;ERATE=0.0008;THETA=0.0004;AC=1289;AN=2184 GT:DS:GL:BD 0.59020144 1
1 90449545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.8097;AVGPOST=0.9971;RSQ=0.9927;ERATE=0.0007;THETA=0.0004;AC=1769;AN=2184 GT:DS:GL:BD 0.80998170 1
1 90449552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90449638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.410;LDAF=0.0056;AVGPOST=0.9935;RSQ=0.5387;ERATE=0.0010;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90449649 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.881;LDAF=0.1151;AVGPOST=0.9577;RSQ=0.8414;ERATE=0.0211;THETA=0.0008;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 90449662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0055;AVGPOST=0.9972;RSQ=0.7925;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90449724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0514;AVGPOST=0.9984;RSQ=0.9884;ERATE=0.0004;THETA=0.0004;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 90449729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6705;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90449733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.792;LDAF=0.0062;AVGPOST=0.9958;RSQ=0.7314;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90449762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.952;LDAF=0.5801;AVGPOST=0.9860;RSQ=0.9779;ERATE=0.0011;THETA=0.0008;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 90449778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.375;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3587;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90449780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0177;AVGPOST=0.9897;RSQ=0.7676;ERATE=0.0009;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90449898 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.783;LDAF=0.0070;AVGPOST=0.9953;RSQ=0.7415;ERATE=0.0006;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90449913 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.938;LDAF=0.0203;AVGPOST=0.9960;RSQ=0.9213;ERATE=0.0006;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 90449959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0061;AVGPOST=0.9982;RSQ=0.8829;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90450140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.5422;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90450211 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0503;AVGPOST=0.9963;RSQ=0.9692;ERATE=0.0006;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 90450216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0079;AVGPOST=0.9931;RSQ=0.6406;ERATE=0.0008;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90450252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0436;AVGPOST=0.9945;RSQ=0.9475;ERATE=0.0004;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 90450289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.980;LDAF=0.8103;AVGPOST=0.9934;RSQ=0.9841;ERATE=0.0007;THETA=0.0005;AC=1772;AN=2184 GT:DS:GL:BD 0.81135529 1
1 90450589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.444;LDAF=0.0135;AVGPOST=0.9856;RSQ=0.5745;ERATE=0.0012;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90450635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.891;LDAF=0.0721;AVGPOST=0.9926;RSQ=0.9535;ERATE=0.0009;THETA=0.0004;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 90450859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0049;AVGPOST=0.9977;RSQ=0.8311;ERATE=0.0003;THETA=0.0035;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90450976 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0711;AVGPOST=0.9993;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 90451028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9982;RSQ=0.9243;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90451055 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90451127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90451203 . CAGA C 125 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.6261;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90451209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0716;AVGPOST=0.9985;RSQ=0.9913;ERATE=0.0005;THETA=0.0007;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 90451348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.901;LDAF=0.0189;AVGPOST=0.9940;RSQ=0.8725;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90451693 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90451838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9214;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90451856 . AG A 114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6206;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90452080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0004;THETA=0.0030;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90452119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0959;AVGPOST=0.9994;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 90452149 . TA T 1803 PASS INDEL;BAVGPOST=0.991;BRSQ=0.739;LDAF=0.0161;AVGPOST=0.9915;RSQ=0.7649;ERATE=0.0007;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90452223 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90452245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90452252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90452261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0029;AVGPOST=0.9962;RSQ=0.5371;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90452407 rs35407304 A AT 10980 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0710;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 90452415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0361;AVGPOST=0.9961;RSQ=0.9582;ERATE=0.0004;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 90452443 . C CT 6542 PASS INDEL;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0722;AVGPOST=0.9977;RSQ=0.9871;ERATE=0.0006;THETA=0.0003;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 90452543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90452560 rs79760059 T TA 90828 PASS INDEL;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.8229;AVGPOST=0.9853;RSQ=0.9638;ERATE=0.0041;THETA=0.0006;AC=1803;AN=2184 GT:DS:GL:BD 0.82554942 1
1 90452717 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8765;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90452729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90452780 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9986;RSQ=0.9418;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90452797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0346;AVGPOST=0.9974;RSQ=0.9703;ERATE=0.0004;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 90452847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.888;LDAF=0.0165;AVGPOST=0.9954;RSQ=0.8896;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90452900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0124;AVGPOST=0.9989;RSQ=0.9587;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90453017 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0046;AVGPOST=0.9964;RSQ=0.7236;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90453130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90453173 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9069;AVGPOST=0.9967;RSQ=0.9846;ERATE=0.0005;THETA=0.0004;AC=1981;AN=2184 GT:DS:GL:BD 0.90705127 1
1 90453268 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9997;RSQ=0.9850;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90453326 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5496;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90453336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7164;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90453431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90453439 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5112;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90453613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90453724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90453808 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90453885 . C CT 181 PASS INDEL;BAVGPOST=0.994;BRSQ=0.644;LDAF=0.0120;AVGPOST=0.9901;RSQ=0.6551;ERATE=0.0017;THETA=0.0018;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90453910 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8467;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90453917 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90453920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8479;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90454073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0418;AVGPOST=0.9988;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 90454170 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90454240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90454443 . A AT 94 PASS INDEL;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0048;AVGPOST=0.9948;RSQ=0.6093;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90454451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6034;AVGPOST=0.9967;RSQ=0.9944;ERATE=0.0005;THETA=0.0029;AC=1317;AN=2184 GT:DS:GL:BD 0.60302198 1
1 90454723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0710;AVGPOST=0.9990;RSQ=0.9933;ERATE=0.0004;THETA=0.0005;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 90454762 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.8099;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90454816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90454860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0624;AVGPOST=0.9936;RSQ=0.9588;ERATE=0.0005;THETA=0.0016;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 90454960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90454971 . AAAAC A 32 PASS INDEL;BAVGPOST=0.998;BRSQ=0.718;LDAF=0.0128;AVGPOST=0.9822;RSQ=0.4497;ERATE=0.0033;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90455062 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6168;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90455137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7703;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90455237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8445;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90455268 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0195;AVGPOST=0.9986;RSQ=0.9678;ERATE=0.0004;THETA=0.0040;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 90455415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6238;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0004;THETA=0.0006;AC=1362;AN=2184 GT:DS:GL:BD 0.62362635 1
1 90455421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90455426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7755;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90455462 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90455867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6536;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90455954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9517;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90455967 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0045;AVGPOST=0.9975;RSQ=0.7778;ERATE=0.0006;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90456022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90456097 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.6020;AVGPOST=0.9964;RSQ=0.9940;ERATE=0.0008;THETA=0.0008;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 90456106 . A AT 106 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90456258 . CGTGT C 170 PASS INDEL;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0038;AVGPOST=0.9961;RSQ=0.6182;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90456269 . ATG A 1065 PASS INDEL;BAVGPOST=0.961;BRSQ=0.603;LDAF=0.0505;AVGPOST=0.9496;RSQ=0.5752;ERATE=0.0077;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 90456278 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.916;LDAF=0.5446;AVGPOST=0.9307;RSQ=0.8898;ERATE=0.0198;THETA=0.0007;AC=1212;AN=2184 GT:DS:GL:BD 0.55494505 1
1 90456281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.885;LDAF=0.0237;AVGPOST=0.9897;RSQ=0.8282;ERATE=0.0013;THETA=0.0011;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 90456311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90456325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9991;RSQ=0.9824;ERATE=0.0004;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 90456357 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90456389 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.882;LDAF=0.9632;AVGPOST=0.9936;RSQ=0.9271;ERATE=0.0005;THETA=0.0004;AC=2106;AN=2184 GT:DS:GL:BD 0.96428573 1
1 90456394 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.919;LDAF=0.9660;AVGPOST=0.9966;RSQ=0.9570;ERATE=0.0005;THETA=0.0010;AC=2113;AN=2184 GT:DS:GL:BD 0.96749085 1
1 90456405 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9633;AVGPOST=0.9913;RSQ=0.8985;ERATE=0.0026;THETA=0.0008;AC=2111;AN=2184 GT:DS:GL:BD 0.96657509 1
1 90456413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5046;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90456489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90456520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90456543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90456552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8531;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90456554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90456751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90457010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9143;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90457397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90457750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9984;RSQ=0.9338;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90457914 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0077;AVGPOST=0.9989;RSQ=0.9484;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90457944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0046;AVGPOST=0.9979;RSQ=0.8068;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90458004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9094;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90458232 . ATG A 385 PASS INDEL;BAVGPOST=0.987;BRSQ=0.713;LDAF=0.0270;AVGPOST=0.9759;RSQ=0.6250;ERATE=0.0118;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 90458234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5980;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90458282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90458370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90458396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90458500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4723;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90458521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9425;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90458657 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0044;AVGPOST=0.9974;RSQ=0.7800;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90458686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.5270;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90458794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6140;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90458840 . CT C 63 PASS INDEL;BAVGPOST=0.968;BRSQ=0.393;LDAF=0.0439;AVGPOST=0.9387;RSQ=0.4092;ERATE=0.0117;THETA=0.0008;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 90458851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.700;LDAF=0.9134;AVGPOST=0.9293;RSQ=0.6427;ERATE=0.0267;THETA=0.0008;AC=2047;AN=2184 GT:DS:GL:BD 0.93727106 1
1 90459146 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90459205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90459252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90459405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90459552 . GTGGATGCC G 1160 PASS INDEL;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8862;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90459559 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90459612 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90459615 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0285;AVGPOST=0.9996;RSQ=0.9933;ERATE=0.0004;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 90459744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9680;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=2114;AN=2184 GT:DS:GL:BD 0.96794873 1
1 90459747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0605;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 90459900 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0463;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0009;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 90459982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9420;AVGPOST=0.9993;RSQ=0.9948;ERATE=0.0004;THETA=0.0005;AC=2057;AN=2184 GT:DS:GL:BD 0.94184983 1
1 90460026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7713;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90460035 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9256;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90460129 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9991;RSQ=0.9586;ERATE=0.0004;THETA=0.0061;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90460139 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5577;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90460168 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0302;AVGPOST=0.9988;RSQ=0.9840;ERATE=0.0003;THETA=0.0049;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 90460171 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.716;LDAF=0.0038;AVGPOST=0.9970;RSQ=0.6649;ERATE=0.0011;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90460246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7339;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90460399 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4350;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90460436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0038;AVGPOST=0.9966;RSQ=0.6635;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90460437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0024;AVGPOST=0.9961;RSQ=0.2783;ERATE=0.0009;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90460482 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.931;LDAF=0.1376;AVGPOST=0.9910;RSQ=0.9720;ERATE=0.0006;THETA=0.0003;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 90460509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6258;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90460522 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4676;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90460807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0042;AVGPOST=0.9940;RSQ=0.4410;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90461263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0004;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90461348 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1559;AVGPOST=0.9919;RSQ=0.9781;ERATE=0.0018;THETA=0.0008;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 90461365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8928;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90461491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90461554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0074;AVGPOST=0.9987;RSQ=0.9296;ERATE=0.0005;THETA=0.0029;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90461576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9635;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90461581 . TGTAA T 225 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5188;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90461619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90461776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0339;AVGPOST=0.9946;RSQ=0.9413;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 90461777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0337;AVGPOST=0.9950;RSQ=0.9460;ERATE=0.0003;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 90461784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.571;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90461840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0088;AVGPOST=0.9987;RSQ=0.9449;ERATE=0.0003;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90461849 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8750;ERATE=0.0003;THETA=0.0058;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90461980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8256;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90462222 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9974;RSQ=0.8950;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90462488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0061;AVGPOST=0.9982;RSQ=0.8862;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90462595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9011;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90462753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0052;AVGPOST=0.9978;RSQ=0.8480;ERATE=0.0003;THETA=0.0030;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90462873 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8625;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90462890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2757;AVGPOST=0.9933;RSQ=0.9865;ERATE=0.0004;THETA=0.0009;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 90462912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90462988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0080;AVGPOST=0.9979;RSQ=0.8868;ERATE=0.0006;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90463090 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0067;AVGPOST=0.9973;RSQ=0.8490;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90463093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.876;LDAF=0.0231;AVGPOST=0.9930;RSQ=0.8742;ERATE=0.0013;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90463153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0094;AVGPOST=0.9982;RSQ=0.9189;ERATE=0.0005;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90463219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5035;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90463407 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8105;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90463415 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8322;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90463629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90463661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90463669 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90463700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90463705 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90463732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90463746 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90463747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90463825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.7469;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90463910 . A AT 2504 PASS INDEL;BAVGPOST=0.961;BRSQ=0.681;LDAF=0.0750;AVGPOST=0.9367;RSQ=0.6274;ERATE=0.0109;THETA=0.0007;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 90463954 . G GT 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90463960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9562;ERATE=0.0009;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90464047 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90464164 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90464414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0080;AVGPOST=0.9967;RSQ=0.8553;ERATE=0.0004;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90464558 . A AT 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5614;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90464573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7800;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90464751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7629;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90464834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0038;AVGPOST=0.9975;RSQ=0.7611;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90465015 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0060;AVGPOST=0.9985;RSQ=0.9072;ERATE=0.0003;THETA=0.0019;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90465140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9701;AVGPOST=0.9986;RSQ=0.9770;ERATE=0.0004;THETA=0.0007;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 90465166 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9485;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90465227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9575;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90465383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90465390 . TG T 274 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8007;ERATE=0.0012;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90465404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8758;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90465438 . A AG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90465739 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9331;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90465754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0067;AVGPOST=0.9978;RSQ=0.8624;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90465856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90465871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0129;AVGPOST=0.9993;RSQ=0.9747;ERATE=0.0002;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90466122 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9432;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90466141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9642;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90466227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90466262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90466350 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9738;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90466516 . TGTA T 1248 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0058;AVGPOST=0.9972;RSQ=0.8172;ERATE=0.0006;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90466644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0082;AVGPOST=0.9978;RSQ=0.8987;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90466695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0002;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90466774 . C CA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4605;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90466904 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90467060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90467194 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8058;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90467332 . GTCTTGAACTCC G 256 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5656;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90467514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8442;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90467554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90467630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3386;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90467646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0035;AVGPOST=0.9967;RSQ=0.6144;ERATE=0.0007;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90467648 . A AT 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0048;AVGPOST=0.9929;RSQ=0.4220;ERATE=0.0017;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90467713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5846;ERATE=0.0006;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90467898 rs59948569 GAAAT G 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7334;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90467930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9689;AVGPOST=0.9989;RSQ=0.9826;ERATE=0.0003;THETA=0.0011;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 90468172 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90468261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9989;RSQ=0.9316;ERATE=0.0002;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90468291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4853;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90468390 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0301;AVGPOST=0.9976;RSQ=0.9684;ERATE=0.0003;THETA=0.0008;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 90468422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6719;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90468641 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9106;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90468655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.534;LDAF=0.0044;AVGPOST=0.9960;RSQ=0.6495;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90468674 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.797;LDAF=0.9424;AVGPOST=0.9614;RSQ=0.7157;ERATE=0.0097;THETA=0.0010;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 90468853 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0045;AVGPOST=0.9967;RSQ=0.7271;ERATE=0.0003;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90468926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.8912;ERATE=0.0004;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90468927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4738;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90469065 . GTA G 988 PASS INDEL;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0074;AVGPOST=0.9978;RSQ=0.8635;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90469166 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90469391 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0025;AVGPOST=0.9970;RSQ=0.5800;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90469531 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.3912;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90469747 . T TG 46 PASS INDEL;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.3833;ERATE=0.0007;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90469758 . T TA 95 PASS INDEL;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3214;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90469808 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90469883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6891;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90469952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5135;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90469972 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0057;AVGPOST=0.9984;RSQ=0.8997;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90470055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0057;AVGPOST=0.9979;RSQ=0.8756;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90470086 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90470294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9816;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90470518 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90470615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90470772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0033;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90470843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90470915 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6560;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0009;THETA=0.0011;AC=1431;AN=2184 GT:DS:GL:BD 0.65521979 1
1 90470986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90471092 rs34196511 GTCAA G 1090 PASS INDEL;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0111;AVGPOST=0.9968;RSQ=0.8700;ERATE=0.0006;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90471125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90471570 . T TG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8439;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90471628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5437;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90471768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0067;AVGPOST=0.9981;RSQ=0.9048;ERATE=0.0007;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90471780 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0013;AVGPOST=0.9977;RSQ=0.3125;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90471960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7394;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90472053 . ATTTC A 297 PASS INDEL;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0038;AVGPOST=0.9993;RSQ=0.9166;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90472088 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90472109 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3906;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90472205 . A AT 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.569;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3745;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90472392 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8475;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90472549 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.3685;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90472642 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90472673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90472712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90472950 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8898;ERATE=0.0029;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90473462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90473724 . TCTAG T 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90473786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7660;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90473851 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1573;AVGPOST=0.9946;RSQ=0.9850;ERATE=0.0003;THETA=0.0007;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 90474049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1009;AVGPOST=0.9984;RSQ=0.9941;ERATE=0.0003;THETA=0.0008;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 90474120 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.9697;AVGPOST=0.9973;RSQ=0.9617;ERATE=0.0008;THETA=0.0005;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 90474206 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5427;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90474279 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9637;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90474301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.9861;AVGPOST=0.9995;RSQ=0.9827;ERATE=0.0002;THETA=0.0005;AC=2154;AN=2184 GT:DS:GL:BD 0.98626375 1
1 90474445 . GA G 64 PASS INDEL;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8476;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90474468 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.9020;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90474546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90474763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7914;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90474858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7346;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90474986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7941;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90474999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.3900;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90475204 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0081;AVGPOST=0.9984;RSQ=0.9337;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90475223 . GTCT G 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4664;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90475450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90475472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7768;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90475597 . A AT 137 PASS INDEL;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4528;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90475762 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90475869 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90475877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90475895 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0533;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0002;THETA=0.0009;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 90475946 . TAAC T 972 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9399;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90475947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8691;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=1898;AN=2184 GT:DS:GL:BD 0.86904764 1
1 90476297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6023;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90476349 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.4355;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90476429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8300;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90476631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5607;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90476636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0041;AVGPOST=0.9987;RSQ=0.8699;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90476694 . ATATG A 616 PASS INDEL;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0038;AVGPOST=0.9981;RSQ=0.7791;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90476724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4593;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90476750 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90476906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5368;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90477174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0050;AVGPOST=0.9988;RSQ=0.9011;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90477231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7512;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90477304 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.3345;ERATE=0.0004;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90477317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5127;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90477505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9060;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90477520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.563;LDAF=0.0058;AVGPOST=0.9932;RSQ=0.5780;ERATE=0.0006;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90477552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7383;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90477613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90477751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6453;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90477769 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90477862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90477883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90478005 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.778;LDAF=0.0100;AVGPOST=0.9949;RSQ=0.7876;ERATE=0.0008;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90478052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90478142 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90478317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7588;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90478426 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0489;AVGPOST=0.9990;RSQ=0.9914;ERATE=0.0002;THETA=0.0027;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 90478549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0087;AVGPOST=0.9992;RSQ=0.9671;ERATE=0.0006;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90478580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9864;ERATE=0.0002;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90478615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90478650 . A AC 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90478694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90478704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9880;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90478739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90478741 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90478754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90478812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90478951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8816;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90478957 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0048;AVGPOST=0.9991;RSQ=0.9243;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90479077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7494;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90479198 . TAATC T 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5359;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90479418 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.593;LDAF=0.0102;AVGPOST=0.9917;RSQ=0.6552;ERATE=0.0011;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90479449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.551;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4017;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90479540 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90479767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8872;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90479783 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0205;AVGPOST=0.9987;RSQ=0.9712;ERATE=0.0003;THETA=0.0014;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 90480048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.8785;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90480107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5068;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90480142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8192;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90480157 . G GT 38 PASS INDEL;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.4517;ERATE=0.0008;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90480299 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9213;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90480352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.7323;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90480526 . TTAATA T 109 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7687;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90480608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0037;AVGPOST=0.9966;RSQ=0.7154;ERATE=0.0002;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90480772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0505;AVGPOST=0.9984;RSQ=0.9867;ERATE=0.0003;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 90480793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1262;AVGPOST=0.9968;RSQ=0.9909;ERATE=0.0003;THETA=0.0008;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 90480849 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90480921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5921;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90481484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90481594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8330;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90481958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8120;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90481995 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8561;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90482072 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8453;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90482121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.963;LDAF=0.7256;AVGPOST=0.9691;RSQ=0.9400;ERATE=0.0068;THETA=0.0005;AC=1598;AN=2184 GT:DS:GL:BD 0.73168498 1
1 90482185 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5095;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90482275 rs112795830 C CA 647 PASS INDEL;BAVGPOST=0.939;BRSQ=0.485;LDAF=0.0985;AVGPOST=0.8879;RSQ=0.4578;ERATE=0.0312;THETA=0.0018;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 90482380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0139;AVGPOST=0.9979;RSQ=0.9428;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90482526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90482652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8295;ERATE=0.0013;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90482713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90482721 . G GT 23 PASS INDEL;BAVGPOST=0.994;BRSQ=0.414;LDAF=0.0126;AVGPOST=0.9847;RSQ=0.5350;ERATE=0.0036;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90482755 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9848;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90482802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90482803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0159;AVGPOST=0.9982;RSQ=0.9525;ERATE=0.0005;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 90482903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9852;ERATE=0.0002;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90482984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90483200 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90483266 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1134;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0002;THETA=0.0007;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 90483324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90483512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9172;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90483567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90483579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4728;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90483634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5901;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90483695 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6793;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90483712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0218;AVGPOST=0.9984;RSQ=0.9670;ERATE=0.0005;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90483839 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.590;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.4724;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90483859 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9645;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90484131 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6364;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90484234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.793;LDAF=0.0222;AVGPOST=0.9908;RSQ=0.8417;ERATE=0.0144;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 90484342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90484648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90484683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90484776 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90484834 . CT C 284 PASS INDEL;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7949;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90484876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90485000 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1105;AVGPOST=0.9980;RSQ=0.9944;ERATE=0.0002;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 90485030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9060;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90485039 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1024;AVGPOST=0.9973;RSQ=0.9905;ERATE=0.0006;THETA=0.0006;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 90485074 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7729;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90485304 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90485351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8636;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90485374 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1009;AVGPOST=0.9988;RSQ=0.9952;ERATE=0.0005;THETA=0.0008;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 90485384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9299;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90485605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6625;ERATE=0.0009;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90485880 . T TA 248 PASS INDEL;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0051;AVGPOST=0.9951;RSQ=0.5979;ERATE=0.0016;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90485974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90486173 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1009;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 90486196 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0002;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90486278 . TTAAG T 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5035;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90486286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90486299 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90486412 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7082;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0003;THETA=0.0004;AC=1546;AN=2184 GT:DS:GL:BD 0.70787543 1
1 90486493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90486522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90486527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90486569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0015;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90486578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90486681 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90486685 . CAT C 689 PASS INDEL;BAVGPOST=0.997;BRSQ=0.757;LDAF=0.0057;AVGPOST=0.9972;RSQ=0.7863;ERATE=0.0007;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90486694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0212;AVGPOST=0.9996;RSQ=0.9933;ERATE=0.0002;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90486727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6497;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90486754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90486851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90486946 . TA T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6026;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90486994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9816;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90487466 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0101;AVGPOST=0.9990;RSQ=0.9538;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90487641 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90487668 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90487883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90487921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90488107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9533;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90488126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90488157 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90488216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90488268 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0116;AVGPOST=0.9989;RSQ=0.9583;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90488288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.7183;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90488301 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90488463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.6869;AVGPOST=0.9967;RSQ=0.9947;ERATE=0.0004;THETA=0.0006;AC=1501;AN=2184 GT:DS:GL:BD 0.68727106 1
1 90488505 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9639;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90488514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90488522 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5691;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90488533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5316;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90488570 . A AAT 397 PASS INDEL;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7744;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90488599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0074;AVGPOST=0.9964;RSQ=0.8154;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90488610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90488623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9248;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90488747 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0133;AVGPOST=0.9989;RSQ=0.9643;ERATE=0.0004;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90488804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5544;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90488845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90488847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.917;LDAF=0.0231;AVGPOST=0.9941;RSQ=0.9033;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90488948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90488968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5949;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90489036 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7354;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90489066 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90489084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90489120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.6982;ERATE=0.0011;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90489230 . CA C 127 PASS INDEL;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6452;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90489261 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8824;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90489308 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90489394 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90489559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9330;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90489633 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90489643 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7077;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=1545;AN=2184 GT:DS:GL:BD 0.70741761 1
1 90489650 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8664;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90489786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1011;AVGPOST=0.9991;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 90489797 . CAAAAAA C 1673 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90489818 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0005;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90489826 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0038;AVGPOST=0.9968;RSQ=0.6895;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90489849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90489910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9519;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90489925 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9354;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90489966 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6555;AVGPOST=0.9975;RSQ=0.9960;ERATE=0.0004;THETA=0.0006;AC=1430;AN=2184 GT:DS:GL:BD 0.65476191 1
1 90490018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0092;AVGPOST=0.9989;RSQ=0.9465;ERATE=0.0002;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90490044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6880;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90490051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0058;AVGPOST=0.9981;RSQ=0.8784;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90490202 . CTT C 347 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8696;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90490301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0002;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90490320 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90490331 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90490364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90490394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90490477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7629;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90490572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6419;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90490708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90490766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90490784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90490821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5694;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90490822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9443;ERATE=0.0009;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90490948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8604;ERATE=0.0004;THETA=0.0029;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90490959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9405;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90490961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0002;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90490970 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7427;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90491046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8659;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90491345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90491387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90491557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.667;LDAF=0.0185;AVGPOST=0.9812;RSQ=0.5657;ERATE=0.0039;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90491604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.3950;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90491712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9025;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90491903 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8207;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90491931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0134;AVGPOST=0.9987;RSQ=0.9612;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90491958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0047;AVGPOST=0.9986;RSQ=0.9154;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90491999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9169;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90492065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0129;AVGPOST=0.9981;RSQ=0.9369;ERATE=0.0005;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90492196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9270;ERATE=0.0009;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90492517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6600;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0012;AC=1440;AN=2184 GT:DS:GL:BD 0.65934068 1
1 90492613 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9179;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90492754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0461;AVGPOST=0.9985;RSQ=0.9867;ERATE=0.0003;THETA=0.0025;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 90493026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6581;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0004;THETA=0.0001;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 90493201 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90493268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90493298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90493378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90493460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7255;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90493477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8694;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90493539 . C CA 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.7534;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90493568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90493592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0150;AVGPOST=0.9987;RSQ=0.9642;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90493704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90493725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4697;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90493762 . GC G 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4391;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90493780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4521;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90493817 . CAG C 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4256;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90494040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90494235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5461;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90494292 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90494307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6961;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90494374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90494423 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.4924;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90494475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6589;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=1438;AN=2184 GT:DS:GL:BD 0.65842491 1
1 90494722 . T TG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5110;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90494855 . T TTG 378 PASS INDEL;BAVGPOST=0.950;BRSQ=0.533;LDAF=0.0566;AVGPOST=0.9471;RSQ=0.6221;ERATE=0.0008;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 90494988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9277;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90495051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.662;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6671;ERATE=0.0012;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90495085 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5157;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90495289 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90495326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0083;AVGPOST=0.9951;RSQ=0.7929;ERATE=0.0006;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90495367 rs34297693 GATAA G 68154 PASS INDEL;BAVGPOST=0.989;BRSQ=0.977;LDAF=0.6938;AVGPOST=0.9709;RSQ=0.9499;ERATE=0.0058;THETA=0.0006;AC=1522;AN=2184 GT:DS:GL:BD 0.69688642 1
1 90495554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7019;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90495557 . TTTCAAGTATC T 924 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.8024;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90495598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9081;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90495639 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90495703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0583;AVGPOST=0.9965;RSQ=0.9757;ERATE=0.0022;THETA=0.0004;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 90495713 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8808;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90495737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8058;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90495759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90495760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9690;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90495895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90495921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.6929;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90496012 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9845;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90496117 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9334;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90496336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.0092;AVGPOST=0.9950;RSQ=0.7689;ERATE=0.0005;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90496369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5433;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90496467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6323;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90496542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90496611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9880;ERATE=0.0002;THETA=0.0009;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90496648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90496726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.738;LDAF=0.0053;AVGPOST=0.9980;RSQ=0.8467;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90496854 . CAG C 3103 PASS INDEL;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0221;AVGPOST=0.9977;RSQ=0.9633;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90496859 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9447;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90496864 . A AACT 522 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7630;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90496892 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90496978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6892;AVGPOST=0.9963;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=1505;AN=2184 GT:DS:GL:BD 0.68910259 1
1 90497218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5558;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90497283 . A AT 395 PASS INDEL;BAVGPOST=0.995;BRSQ=0.898;LDAF=0.0248;AVGPOST=0.9942;RSQ=0.9035;ERATE=0.0004;THETA=0.0011;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 90497348 . ACCTCAAGTGATCTG A 811 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9088;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90497350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7735;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90497455 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9136;ERATE=0.0008;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90497551 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7021;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90497717 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0046;AVGPOST=0.9993;RSQ=0.9346;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90497794 . TC T 183 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90497967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.8805;ERATE=0.0002;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90497988 . GAGTT G 1829 PASS INDEL;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0132;AVGPOST=0.9967;RSQ=0.8965;ERATE=0.0013;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90498321 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0082;AVGPOST=0.9995;RSQ=0.9776;ERATE=0.0002;THETA=0.0013;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90498411 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90498447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0074;AVGPOST=0.9992;RSQ=0.9546;ERATE=0.0003;THETA=0.0025;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90498510 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90498540 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6368;AVGPOST=0.9971;RSQ=0.9949;ERATE=0.0005;THETA=0.0005;AC=1390;AN=2184 GT:DS:GL:BD 0.63644689 1
1 90498573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0101;AVGPOST=0.9995;RSQ=0.9774;ERATE=0.0003;THETA=0.0051;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90498586 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0040;AVGPOST=0.9996;RSQ=0.9681;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90498645 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7214;ERATE=0.0003;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90498646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9137;ERATE=0.0009;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90498769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5159;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90498921 . TAAC T 504 PASS INDEL;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8708;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90499097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90499190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.880;LDAF=0.0170;AVGPOST=0.9952;RSQ=0.9002;ERATE=0.0004;THETA=0.0012;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90499204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9419;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90499221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6204;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90499232 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0164;AVGPOST=0.9991;RSQ=0.9802;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90499258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0104;AVGPOST=0.9985;RSQ=0.9389;ERATE=0.0003;THETA=0.0135;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90499263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9084;ERATE=0.0008;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90499414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9247;ERATE=0.0003;THETA=0.0018;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90499436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0108;AVGPOST=0.9985;RSQ=0.9510;ERATE=0.0003;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90499438 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0136;AVGPOST=0.9981;RSQ=0.9410;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90499591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90499616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90499665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7443;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90499700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90499819 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7333;AVGPOST=0.9917;RSQ=0.9844;ERATE=0.0004;THETA=0.0005;AC=1602;AN=2184 GT:DS:GL:BD 0.73351645 1
1 90499831 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0104;AVGPOST=0.9991;RSQ=0.9647;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90499858 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6023;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90499903 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90499953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5627;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90499959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9782;ERATE=0.0002;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90500042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0314;AVGPOST=0.9975;RSQ=0.9683;ERATE=0.0005;THETA=0.0016;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 90500064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9161;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90500132 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90500268 . CTTTAT C 170 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5319;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90500353 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7467;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90500390 . CACTT C 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3924;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90500460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90500463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90500609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7136;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90500917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0161;AVGPOST=0.9980;RSQ=0.9534;ERATE=0.0006;THETA=0.0011;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90500996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.8024;ERATE=0.0002;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90501163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90501191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90501218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90501229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90501357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0197;AVGPOST=0.9981;RSQ=0.9594;ERATE=0.0004;THETA=0.0011;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 90501379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.970;LDAF=0.6417;AVGPOST=0.9717;RSQ=0.9559;ERATE=0.0063;THETA=0.0010;AC=1404;AN=2184 GT:DS:GL:BD 0.64285713 1
1 90501439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90501535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0039;AVGPOST=0.9968;RSQ=0.6467;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90501587 . AC A 1286 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0125;AVGPOST=0.9995;RSQ=0.9822;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90501653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9993;RSQ=0.9354;ERATE=0.0004;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90501669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8559;AVGPOST=0.9948;RSQ=0.9844;ERATE=0.0004;THETA=0.0013;AC=1870;AN=2184 GT:DS:GL:BD 0.85622710 1
1 90501698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8134;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90501733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90501904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9995;RSQ=0.9789;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90501908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6969;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90501991 . T TA 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5570;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90502043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9235;ERATE=0.0006;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90502066 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0081;AVGPOST=0.9992;RSQ=0.9518;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90502070 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5359;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90502153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9978;RSQ=0.8739;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90502302 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.4769;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90502340 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4104;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90502460 . AAG A 303 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8951;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90502468 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6582;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90502557 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0068;AVGPOST=0.9987;RSQ=0.9258;ERATE=0.0004;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90502609 . G GA 333 PASS INDEL;BAVGPOST=0.994;BRSQ=0.753;LDAF=0.0157;AVGPOST=0.9840;RSQ=0.5867;ERATE=0.0026;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90502617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0114;AVGPOST=0.9988;RSQ=0.9586;ERATE=0.0004;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90502690 . TAA T 673 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0087;AVGPOST=0.9971;RSQ=0.8666;ERATE=0.0006;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90502770 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9669;ERATE=0.0004;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90502815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90502853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0066;AVGPOST=0.9992;RSQ=0.9540;ERATE=0.0004;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90502876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6993;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90502996 . C CT 329 PASS INDEL;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0074;AVGPOST=0.9974;RSQ=0.8521;ERATE=0.0006;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90503141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.9073;ERATE=0.0004;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90503280 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90503376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0312;AVGPOST=0.9988;RSQ=0.9830;ERATE=0.0002;THETA=0.0008;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 90503397 . GTGGC G 98 PASS INDEL;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5526;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90503411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.8891;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90503425 . G GA 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6608;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90503430 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5898;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90503474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0054;AVGPOST=0.9965;RSQ=0.7457;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90503524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.5823;ERATE=0.0007;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90503570 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7283;ERATE=0.0005;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90503582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6570;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90503587 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9981;RSQ=0.8922;ERATE=0.0002;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90503638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5714;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90503734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4382;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90503773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0070;AVGPOST=0.9952;RSQ=0.7864;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90503837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.836;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.6771;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90503888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4574;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90504046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0043;AVGPOST=0.9972;RSQ=0.8268;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90504083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8574;AVGPOST=0.9911;RSQ=0.9727;ERATE=0.0005;THETA=0.0017;AC=1872;AN=2184 GT:DS:GL:BD 0.85714287 1
1 90504155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90504247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90504343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90504358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6840;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90504397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90504431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6263;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90504565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.9044;ERATE=0.0003;THETA=0.0060;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90504727 rs36104200 CAT C 2869 PASS INDEL;BAVGPOST=0.997;BRSQ=0.921;LDAF=0.0141;AVGPOST=0.9952;RSQ=0.8790;ERATE=0.0004;THETA=0.0048;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90504987 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6211;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90505418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0103;AVGPOST=0.9992;RSQ=0.9662;ERATE=0.0002;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90505620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90505622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0116;AVGPOST=0.9990;RSQ=0.9614;ERATE=0.0003;THETA=0.0014;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90505756 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0004;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90505757 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0090;AVGPOST=0.9989;RSQ=0.9522;ERATE=0.0002;THETA=0.0018;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90505775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0169;AVGPOST=0.9980;RSQ=0.9584;ERATE=0.0003;THETA=0.0013;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 90505864 . CTAAT C 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.3977;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90505927 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0178;AVGPOST=0.9980;RSQ=0.9625;ERATE=0.0006;THETA=0.0010;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 90505986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90506069 . C CA 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0096;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90506100 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9914;ERATE=0.0002;THETA=0.0011;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90506173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7133;ERATE=0.0010;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90506174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0566;AVGPOST=0.9973;RSQ=0.9765;ERATE=0.0003;THETA=0.0007;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 90506290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90506328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90506569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6934;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90506606 . T TA 124 PASS INDEL;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5316;ERATE=0.0007;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90506673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5205;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90506753 . CT C 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6063;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90506777 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6584;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90506845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.9121;ERATE=0.0003;THETA=0.0014;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90507046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90507140 rs11387909 C CA 156486 PASS INDEL;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0027;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 90507173 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90507280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90507281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90507558 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8562;ERATE=0.0003;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90507726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0081;AVGPOST=0.9988;RSQ=0.9380;ERATE=0.0003;THETA=0.0014;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90507734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9995;RSQ=0.9784;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90507845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90507856 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1223;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0003;THETA=0.0030;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 90508144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0002;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90508272 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90508289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0896;AVGPOST=0.9986;RSQ=0.9944;ERATE=0.0003;THETA=0.0012;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 90508319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9646;ERATE=0.0003;THETA=0.0017;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90508354 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6626;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90508461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0123;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0002;THETA=0.0017;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90508519 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90508551 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7139;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90508588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0807;AVGPOST=0.9983;RSQ=0.9922;ERATE=0.0002;THETA=0.0010;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 90508604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9117;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90508628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90508641 . AC A 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6696;ERATE=0.0002;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90508721 . CAAT C 209 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8446;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90508889 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7603;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90509043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90509047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9296;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90509089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5744;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90509148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9431;ERATE=0.0003;THETA=0.0036;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90509157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.939;LDAF=0.0415;AVGPOST=0.9922;RSQ=0.9266;ERATE=0.0006;THETA=0.0017;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 90509261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0458;AVGPOST=0.9983;RSQ=0.9849;ERATE=0.0002;THETA=0.0041;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 90509286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9990;RSQ=0.9361;ERATE=0.0002;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90509441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9197;ERATE=0.0003;THETA=0.0040;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90509482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0002;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90509491 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90509567 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90509713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9538;ERATE=0.0002;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90509787 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90509806 rs78853755 AG A 475 PASS INDEL;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0045;AVGPOST=0.9978;RSQ=0.8048;ERATE=0.0003;THETA=0.0025;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90509846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0036;AVGPOST=0.9987;RSQ=0.8369;ERATE=0.0004;THETA=0.0024;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90509853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0117;AVGPOST=0.9992;RSQ=0.9755;ERATE=0.0003;THETA=0.0036;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90509862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0078;AVGPOST=0.9974;RSQ=0.8807;ERATE=0.0006;THETA=0.0023;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90509865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0059;AVGPOST=0.9986;RSQ=0.8930;ERATE=0.0004;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90509942 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.692;LDAF=0.0049;AVGPOST=0.9966;RSQ=0.7246;ERATE=0.0005;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90510047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0116;AVGPOST=0.9991;RSQ=0.9737;ERATE=0.0003;THETA=0.0040;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90510155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90510170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0002;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90510277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8127;ERATE=0.0005;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90510405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8340;ERATE=0.0002;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90510420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0124;AVGPOST=0.9988;RSQ=0.9606;ERATE=0.0009;THETA=0.0012;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90510421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0100;AVGPOST=0.9996;RSQ=0.9824;ERATE=0.0002;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90510452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8816;ERATE=0.0002;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90510455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90510466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0128;AVGPOST=0.9986;RSQ=0.9573;ERATE=0.0002;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90510553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90510567 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0002;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90510609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6921;ERATE=0.0002;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90510617 rs58847802 AT A 12573 PASS INDEL;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0613;AVGPOST=0.9976;RSQ=0.9850;ERATE=0.0003;THETA=0.0008;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 90510671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0002;THETA=0.0024;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90510847 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90510877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0002;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90511099 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90511154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90511157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1220;AVGPOST=0.9967;RSQ=0.9897;ERATE=0.0003;THETA=0.0056;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 90511161 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5228;ERATE=0.0002;THETA=0.0094;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90511266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9338;ERATE=0.0002;THETA=0.0020;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90511636 . GAGAC G 358 PASS INDEL;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0057;AVGPOST=0.9959;RSQ=0.7243;ERATE=0.0008;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90511721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90511777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90511806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0002;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90511890 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9666;ERATE=0.0003;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90512203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9644;ERATE=0.0002;THETA=0.0082;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90512226 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9858;ERATE=0.0003;THETA=0.0047;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90512369 . GCTT G 157 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.6473;ERATE=0.0003;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90512372 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90512475 . GT G 125 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4431;ERATE=0.0005;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90512542 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90512736 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0147;AVGPOST=0.9995;RSQ=0.9850;ERATE=0.0002;THETA=0.0049;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90512760 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0151;AVGPOST=0.9989;RSQ=0.9766;ERATE=0.0003;THETA=0.0026;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90512770 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9548;ERATE=0.0002;THETA=0.0099;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90512795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0154;AVGPOST=0.9997;RSQ=0.9922;ERATE=0.0002;THETA=0.0013;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90512835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7540;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90512863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90512867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5449;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90512968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.975;LDAF=0.0603;AVGPOST=0.9970;RSQ=0.9819;ERATE=0.0003;THETA=0.0088;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 90513151 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7995;ERATE=0.0005;THETA=0.0148;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90513219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1230;AVGPOST=0.9955;RSQ=0.9854;ERATE=0.0008;THETA=0.0043;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 90513232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90513236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90513245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0489;AVGPOST=0.9979;RSQ=0.9821;ERATE=0.0003;THETA=0.0041;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 90513255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5680;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90513388 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1243;AVGPOST=0.9966;RSQ=0.9898;ERATE=0.0004;THETA=0.0032;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 90513407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5611;ERATE=0.0003;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90513421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0567;AVGPOST=0.9989;RSQ=0.9919;ERATE=0.0002;THETA=0.0026;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 90513479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.885;LDAF=0.2072;AVGPOST=0.9504;RSQ=0.8896;ERATE=0.0012;THETA=0.0088;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 90513511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90513513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0573;AVGPOST=0.9987;RSQ=0.9895;ERATE=0.0004;THETA=0.0057;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 90513571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0139;AVGPOST=0.9982;RSQ=0.9545;ERATE=0.0006;THETA=0.0041;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90513586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90513651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7605;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90513652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9154;ERATE=0.0005;THETA=0.0018;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90513657 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9562;ERATE=0.0002;THETA=0.0092;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90513697 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.823;LDAF=0.0069;AVGPOST=0.9964;RSQ=0.8161;ERATE=0.0003;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90513773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1238;AVGPOST=0.9942;RSQ=0.9830;ERATE=0.0008;THETA=0.0038;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 90513921 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0061;AVGPOST=0.9984;RSQ=0.8900;ERATE=0.0003;THETA=0.0056;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90513940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9787;ERATE=0.0002;THETA=0.0016;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90514050 . CATCT C 98 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90514355 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8456;ERATE=0.0003;THETA=0.0069;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90514470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0615;AVGPOST=0.9967;RSQ=0.9796;ERATE=0.0004;THETA=0.0034;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 90514588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0603;AVGPOST=0.9988;RSQ=0.9918;ERATE=0.0003;THETA=0.0060;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 90514736 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0063;AVGPOST=0.9981;RSQ=0.8760;ERATE=0.0004;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90514738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0229;AVGPOST=0.9990;RSQ=0.9831;ERATE=0.0002;THETA=0.0015;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 90514771 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6751;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90514821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0118;AVGPOST=0.9986;RSQ=0.9589;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90514982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0564;AVGPOST=0.9986;RSQ=0.9894;ERATE=0.0003;THETA=0.0053;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 90514984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8172;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90515043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0594;AVGPOST=0.9984;RSQ=0.9891;ERATE=0.0004;THETA=0.0040;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 90515064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0056;AVGPOST=0.9963;RSQ=0.7451;ERATE=0.0007;THETA=0.0035;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90515178 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0131;AVGPOST=0.9993;RSQ=0.9751;ERATE=0.0002;THETA=0.0013;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90515196 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5433;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90515254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90515365 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.755;LDAF=0.0042;AVGPOST=0.9967;RSQ=0.6767;ERATE=0.0005;THETA=0.0028;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90515449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0605;AVGPOST=0.9988;RSQ=0.9921;ERATE=0.0003;THETA=0.0035;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 90515491 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0118;AVGPOST=0.9977;RSQ=0.9291;ERATE=0.0004;THETA=0.0015;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90515519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4838;ERATE=0.0003;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90515561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.976;LDAF=0.1381;AVGPOST=0.9952;RSQ=0.9874;ERATE=0.0006;THETA=0.0013;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 90515646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0123;AVGPOST=0.9984;RSQ=0.9501;ERATE=0.0003;THETA=0.0012;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90515732 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5574;ERATE=0.0006;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90515747 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0070;AVGPOST=0.9913;RSQ=0.5212;ERATE=0.0011;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90515819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7531;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90516008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90516019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90516064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0472;AVGPOST=0.9979;RSQ=0.9839;ERATE=0.0002;THETA=0.0008;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 90516461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9106;ERATE=0.0007;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90516535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7992;ERATE=0.0004;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90516542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0143;AVGPOST=0.9975;RSQ=0.9304;ERATE=0.0003;THETA=0.0013;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90516552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0562;AVGPOST=0.9982;RSQ=0.9887;ERATE=0.0003;THETA=0.0012;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 90516561 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.6147;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90516567 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0609;AVGPOST=0.9981;RSQ=0.9877;ERATE=0.0003;THETA=0.0018;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 90516606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4815;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90516631 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0105;AVGPOST=0.9988;RSQ=0.9492;ERATE=0.0003;THETA=0.0021;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90516647 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90516668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7617;ERATE=0.0008;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90516672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90516759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8720;ERATE=0.0005;THETA=0.0021;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90516895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0607;AVGPOST=0.9993;RSQ=0.9952;ERATE=0.0002;THETA=0.0014;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 90517128 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8465;ERATE=0.0007;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90517201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90517246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7694;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90517260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90517265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1411;AVGPOST=0.9966;RSQ=0.9911;ERATE=0.0004;THETA=0.0019;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 90517319 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7270;ERATE=0.0005;THETA=0.0134;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90517389 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0061;AVGPOST=0.9977;RSQ=0.8527;ERATE=0.0008;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90517486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0121;AVGPOST=0.9989;RSQ=0.9700;ERATE=0.0002;THETA=0.0013;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90517662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0633;AVGPOST=0.9988;RSQ=0.9920;ERATE=0.0004;THETA=0.0023;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 90517702 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0578;AVGPOST=0.9987;RSQ=0.9917;ERATE=0.0003;THETA=0.0011;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 90517763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90517995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90518048 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8922;ERATE=0.0006;THETA=0.0039;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90518076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90518109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90518154 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90518173 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7792;ERATE=0.0002;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90518181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0613;AVGPOST=0.9977;RSQ=0.9867;ERATE=0.0003;THETA=0.0009;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 90518222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90518299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5611;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90518310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5619;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90518393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9438;ERATE=0.0004;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90518429 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.7873;ERATE=0.0009;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90518702 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0627;AVGPOST=0.9992;RSQ=0.9947;ERATE=0.0003;THETA=0.0017;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 90518727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0135;AVGPOST=0.9983;RSQ=0.9576;ERATE=0.0004;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90518763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0614;AVGPOST=0.9979;RSQ=0.9885;ERATE=0.0003;THETA=0.0007;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 90518815 . GAAGA G 49 PASS INDEL;BAVGPOST=0.998;BRSQ=0.690;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6106;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90519168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0627;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0014;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 90519264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90519303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4808;ERATE=0.0002;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90519427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0487;AVGPOST=0.9977;RSQ=0.9838;ERATE=0.0003;THETA=0.0014;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 90519520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90519568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90519599 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90519639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90519649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0215;AVGPOST=0.9989;RSQ=0.9780;ERATE=0.0002;THETA=0.0039;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90519652 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0003;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90519658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0611;AVGPOST=0.9973;RSQ=0.9846;ERATE=0.0004;THETA=0.0018;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 90519807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7991;ERATE=0.0005;THETA=0.0030;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90519834 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8944;ERATE=0.0008;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90519846 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9414;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90519966 . G GA 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0005;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90519977 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9539;ERATE=0.0003;THETA=0.0045;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90520002 rs66535911 ATTG A 240 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8220;ERATE=0.0007;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90520021 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90520161 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6327;ERATE=0.0006;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90520271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0129;AVGPOST=0.9996;RSQ=0.9846;ERATE=0.0002;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90520369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9290;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90520397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0056;AVGPOST=0.9962;RSQ=0.7403;ERATE=0.0006;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90520451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90520463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8706;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90520577 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5957;ERATE=0.0002;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90520618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0637;AVGPOST=0.9986;RSQ=0.9904;ERATE=0.0004;THETA=0.0032;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 90520679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0060;AVGPOST=0.9996;RSQ=0.9675;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90520740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7418;ERATE=0.0003;THETA=0.0021;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90520836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0623;AVGPOST=0.9966;RSQ=0.9793;ERATE=0.0004;THETA=0.0007;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 90520889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9856;ERATE=0.0004;THETA=0.0012;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90520908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9656;ERATE=0.0003;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90520944 . AC A 902 PASS INDEL;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0098;AVGPOST=0.9966;RSQ=0.8603;ERATE=0.0006;THETA=0.0027;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90521036 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.668;LDAF=0.0035;AVGPOST=0.9972;RSQ=0.6689;ERATE=0.0019;THETA=0.0020;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90521053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9639;ERATE=0.0003;THETA=0.0015;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90521068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5246;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90521086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0060;AVGPOST=0.9986;RSQ=0.9051;ERATE=0.0004;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90521195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.6679;ERATE=0.0006;THETA=0.0049;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90521219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8373;ERATE=0.0004;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90521320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90521324 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8799;ERATE=0.0003;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90521392 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0613;AVGPOST=0.9979;RSQ=0.9875;ERATE=0.0002;THETA=0.0018;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 90521393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.8047;ERATE=0.0002;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90521418 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0003;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90521443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90521485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0086;AVGPOST=0.9990;RSQ=0.9507;ERATE=0.0003;THETA=0.0025;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90521557 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8455;ERATE=0.0006;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90521614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0624;AVGPOST=0.9979;RSQ=0.9877;ERATE=0.0003;THETA=0.0014;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 90521626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5498;ERATE=0.0006;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90521628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0128;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0002;THETA=0.0022;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90521647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8684;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90521774 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8640;ERATE=0.0003;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90521926 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.841;LDAF=0.0140;AVGPOST=0.9923;RSQ=0.7848;ERATE=0.0008;THETA=0.0029;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90522122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3069;ERATE=0.0006;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90522213 . AAG A 110 PASS INDEL;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5395;ERATE=0.0003;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90522464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90522491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7695;ERATE=0.0003;THETA=0.0046;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90522550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.5970;ERATE=0.0015;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90522603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0674;AVGPOST=0.9976;RSQ=0.9856;ERATE=0.0003;THETA=0.0013;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 90522633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0386;AVGPOST=0.9968;RSQ=0.9699;ERATE=0.0002;THETA=0.0024;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 90522646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90522702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9018;ERATE=0.0006;THETA=0.0038;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90522730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0623;AVGPOST=0.9957;RSQ=0.9741;ERATE=0.0006;THETA=0.0039;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 90522748 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.5424;ERATE=0.0005;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90522826 . CT C 2285 PASS INDEL;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0674;AVGPOST=0.9916;RSQ=0.9484;ERATE=0.0011;THETA=0.0040;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 90522929 . G GGT 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.5034;ERATE=0.0006;THETA=0.0129;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90523113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.6686;ERATE=0.0009;THETA=0.0087;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90524377 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.705;LDAF=0.0519;AVGPOST=0.9598;RSQ=0.6639;ERATE=0.0136;THETA=0.0007;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 90524692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0034;AVGPOST=0.9962;RSQ=0.5857;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90524747 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4570;ERATE=0.0004;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90524759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7661;ERATE=0.0006;THETA=0.0063;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90524767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.918;LDAF=0.0635;AVGPOST=0.9863;RSQ=0.9117;ERATE=0.0011;THETA=0.0029;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 90526488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.935;LDAF=0.0525;AVGPOST=0.9921;RSQ=0.9429;ERATE=0.0005;THETA=0.0053;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 90526974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8028;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90527205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90528208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0102;AVGPOST=0.9977;RSQ=0.9206;ERATE=0.0003;THETA=0.0038;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90528457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.862;LDAF=0.0118;AVGPOST=0.9928;RSQ=0.7168;ERATE=0.0008;THETA=0.0019;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90528501 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.8986;ERATE=0.0004;THETA=0.0069;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90528503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.814;LDAF=0.0470;AVGPOST=0.9861;RSQ=0.8944;ERATE=0.0005;THETA=0.0081;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 90528518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90528519 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.897;LDAF=0.1200;AVGPOST=0.9750;RSQ=0.9318;ERATE=0.0006;THETA=0.0035;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 90528520 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.843;LDAF=0.0316;AVGPOST=0.9896;RSQ=0.8797;ERATE=0.0003;THETA=0.0017;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 90528536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0032;AVGPOST=0.9976;RSQ=0.6729;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90528543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5621;ERATE=0.0005;THETA=0.0063;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90528550 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0085;AVGPOST=0.9973;RSQ=0.8735;ERATE=0.0005;THETA=0.0081;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90528569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.594;LDAF=0.0037;AVGPOST=0.9959;RSQ=0.4985;ERATE=0.0005;THETA=0.0129;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90528602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0061;AVGPOST=0.9982;RSQ=0.8679;ERATE=0.0005;THETA=0.0044;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90528620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.456;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4979;ERATE=0.0004;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90528673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0178;AVGPOST=0.9965;RSQ=0.9250;ERATE=0.0003;THETA=0.0028;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 90528700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9181;ERATE=0.0005;THETA=0.0072;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90528711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0089;AVGPOST=0.9957;RSQ=0.8102;ERATE=0.0008;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90528712 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0086;AVGPOST=0.9964;RSQ=0.8428;ERATE=0.0004;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90528736 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.838;LDAF=0.0596;AVGPOST=0.9748;RSQ=0.8343;ERATE=0.0010;THETA=0.0014;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 90528752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.919;LDAF=0.0351;AVGPOST=0.9949;RSQ=0.9420;ERATE=0.0004;THETA=0.0098;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 90528800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0074;AVGPOST=0.9952;RSQ=0.7328;ERATE=0.0008;THETA=0.0094;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90528812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.848;LDAF=0.0585;AVGPOST=0.9788;RSQ=0.8557;ERATE=0.0045;THETA=0.0082;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 90528835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.6263;ERATE=0.0005;THETA=0.0051;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90528881 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.961;LDAF=0.0500;AVGPOST=0.9957;RSQ=0.9649;ERATE=0.0005;THETA=0.0098;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 90528922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0062;AVGPOST=0.9969;RSQ=0.8016;ERATE=0.0005;THETA=0.0090;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90528933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0043;AVGPOST=0.9991;RSQ=0.9083;ERATE=0.0003;THETA=0.0078;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90528959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9888;ERATE=0.0002;THETA=0.0052;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90528985 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90529013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0069;AVGPOST=0.9964;RSQ=0.7910;ERATE=0.0016;THETA=0.0049;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90529089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0037;AVGPOST=0.9976;RSQ=0.7303;ERATE=0.0008;THETA=0.0194;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90529093 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8607;ERATE=0.0002;THETA=0.0107;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90529099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0235;AVGPOST=0.9983;RSQ=0.9715;ERATE=0.0007;THETA=0.0101;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 90529117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6231;ERATE=0.0003;THETA=0.0106;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90529158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7424;ERATE=0.0002;THETA=0.0120;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90529201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0113;AVGPOST=0.9973;RSQ=0.9080;ERATE=0.0002;THETA=0.0065;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90529205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0198;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90529240 . GA G 206 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0140;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90529249 . G GA 1566 PASS INDEL;BAVGPOST=0.995;BRSQ=0.828;LDAF=0.0129;AVGPOST=0.9943;RSQ=0.8231;ERATE=0.0004;THETA=0.0068;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90529297 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90529312 . GA G 12659 PASS INDEL;BAVGPOST=0.990;BRSQ=0.948;LDAF=0.0589;AVGPOST=0.9936;RSQ=0.9558;ERATE=0.0008;THETA=0.0137;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 90529315 . AG A 108 PASS INDEL;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.7409;ERATE=0.0016;THETA=0.0061;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90529389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.3933;ERATE=0.0002;THETA=0.0086;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90529390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90529443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9605;ERATE=0.0002;THETA=0.0108;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90529481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90529490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0110;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90529497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.941;LDAF=0.1889;AVGPOST=0.9720;RSQ=0.9439;ERATE=0.0119;THETA=0.0041;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 90529530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0003;THETA=0.0278;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90529674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0002;THETA=0.0206;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90529805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5550;ERATE=0.0003;THETA=0.0100;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90529813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8492;ERATE=0.0002;THETA=0.0080;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90529840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.937;LDAF=0.1438;AVGPOST=0.9778;RSQ=0.9304;ERATE=0.0010;THETA=0.0092;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 90529855 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9200;ERATE=0.0003;THETA=0.0026;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90529875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.7989;ERATE=0.0004;THETA=0.0080;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90530040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.759;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6615;ERATE=0.0019;THETA=0.0074;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90530058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0271;AVGPOST=0.9974;RSQ=0.9621;ERATE=0.0005;THETA=0.0033;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 90530139 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5270;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90530156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.938;LDAF=0.1434;AVGPOST=0.9706;RSQ=0.9174;ERATE=0.0012;THETA=0.0027;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 90530164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.724;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5326;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90530225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0002;THETA=0.0045;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90530314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0134;AVGPOST=0.9972;RSQ=0.9088;ERATE=0.0003;THETA=0.0017;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90530419 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.980;LDAF=0.4545;AVGPOST=0.9794;RSQ=0.9744;ERATE=0.0007;THETA=0.0003;AC=989;AN=2184 GT:DS:GL:BD 0.45283884 0
1 90530476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.3668;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90530626 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8320;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90530669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0315;AVGPOST=0.9990;RSQ=0.9880;ERATE=0.0003;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 90530773 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4851;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90530806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8890;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90530829 . AAAG A 1391 PASS INDEL;BAVGPOST=0.997;BRSQ=0.898;LDAF=0.0113;AVGPOST=0.9990;RSQ=0.9619;ERATE=0.0002;THETA=0.0028;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90531030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5362;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90531169 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90531237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90531238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3140;AVGPOST=0.9944;RSQ=0.9898;ERATE=0.0004;THETA=0.0006;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 90531248 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0427;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 90531266 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7436;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90531279 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9342;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90531293 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4904;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90531558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90531580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0051;AVGPOST=0.9994;RSQ=0.9472;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90531688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9885;ERATE=0.0002;THETA=0.0016;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90531693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0015;AVGPOST=0.9977;RSQ=0.3764;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90531844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90532021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1261;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0003;THETA=0.0009;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 90532047 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90532114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1262;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 90532161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0097;AVGPOST=0.9996;RSQ=0.9837;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90532229 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1270;AVGPOST=0.9982;RSQ=0.9939;ERATE=0.0006;THETA=0.0006;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 90532256 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1092;AVGPOST=0.9986;RSQ=0.9936;ERATE=0.0005;THETA=0.0003;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 90532299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5988;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90532319 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1265;AVGPOST=0.9987;RSQ=0.9956;ERATE=0.0005;THETA=0.0008;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 90532447 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4789;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90532567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1260;AVGPOST=0.9973;RSQ=0.9917;ERATE=0.0005;THETA=0.0015;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 90532766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4376;AVGPOST=0.9974;RSQ=0.9966;ERATE=0.0005;THETA=0.0003;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 90532769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5838;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90532775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90532789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90532844 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90532848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90532951 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0055;AVGPOST=0.9982;RSQ=0.8696;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90533001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8422;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90533045 . TG T 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.3949;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90533166 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9476;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90533167 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4377;AVGPOST=0.9983;RSQ=0.9975;ERATE=0.0006;THETA=0.0004;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 90533245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90533306 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0023;AVGPOST=0.9971;RSQ=0.5409;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90533328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8720;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90533501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6250;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90533506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0051;AVGPOST=0.9957;RSQ=0.6477;ERATE=0.0014;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90533524 rs74958805 C CACCCT 29110 PASS INDEL;BAVGPOST=0.993;BRSQ=0.972;LDAF=0.1211;AVGPOST=0.9949;RSQ=0.9840;ERATE=0.0005;THETA=0.0003;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 90533645 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4370;AVGPOST=0.9984;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 90533650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1260;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0002;THETA=0.0005;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 90533785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1084;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0002;THETA=0.0006;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 90533818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1263;AVGPOST=0.9982;RSQ=0.9947;ERATE=0.0004;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 90533819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8535;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90533954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90533987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90534048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4378;AVGPOST=0.9926;RSQ=0.9899;ERATE=0.0013;THETA=0.0003;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 90534060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1262;AVGPOST=0.9976;RSQ=0.9928;ERATE=0.0004;THETA=0.0004;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 90534102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0098;AVGPOST=0.9988;RSQ=0.9469;ERATE=0.0003;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90534127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1072;AVGPOST=0.9980;RSQ=0.9909;ERATE=0.0004;THETA=0.0044;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 90534210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.1247;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90534215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0251;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0002;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 90534425 . TA T 127 PASS INDEL;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7144;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90534458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0241;AVGPOST=0.9984;RSQ=0.9738;ERATE=0.0003;THETA=0.0038;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 90534504 rs72371545 CT C 103 PASS INDEL;BAVGPOST=0.987;BRSQ=0.566;LDAF=0.0253;AVGPOST=0.9690;RSQ=0.4652;ERATE=0.0074;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90534508 rs6143318 CT C 143 PASS INDEL;BAVGPOST=0.980;BRSQ=0.540;LDAF=0.0339;AVGPOST=0.9584;RSQ=0.4819;ERATE=0.0067;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90534532 . CT C 92 PASS INDEL;BAVGPOST=0.998;BRSQ=0.452;LDAF=0.0043;AVGPOST=0.9951;RSQ=0.5467;ERATE=0.0005;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90534554 rs34034274 TTC T 21027 PASS INDEL;BAVGPOST=0.983;BRSQ=0.278;LDAF=0.9732;AVGPOST=0.9568;RSQ=0.3492;ERATE=0.0070;THETA=0.0005;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 90534589 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8497;ERATE=0.0008;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90534637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0258;AVGPOST=0.9994;RSQ=0.9899;ERATE=0.0004;THETA=0.0011;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 90534674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4578;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90534722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0033;AVGPOST=0.9982;RSQ=0.7962;ERATE=0.0010;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90534752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90534816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90534824 . CTCTT C 264 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6535;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90534854 . C CT 9238 PASS INDEL;BAVGPOST=0.968;BRSQ=0.892;LDAF=0.1368;AVGPOST=0.9792;RSQ=0.9436;ERATE=0.0005;THETA=0.0004;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 90534855 . TTTC T 8437 PASS INDEL;BAVGPOST=0.966;BRSQ=0.885;LDAF=0.1414;AVGPOST=0.9681;RSQ=0.9140;ERATE=0.0024;THETA=0.0008;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 90534866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.866;BRSQ=0.664;LDAF=0.3235;AVGPOST=0.8438;RSQ=0.6803;ERATE=0.0513;THETA=0.0005;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 90534882 . T TTC 138 PASS INDEL;BAVGPOST=0.996;BRSQ=0.453;LDAF=0.0082;AVGPOST=0.9883;RSQ=0.4817;ERATE=0.0006;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90534912 . CTTTCTTT C 23985 PASS INDEL;BAVGPOST=0.774;BRSQ=0.573;LDAF=0.5305;AVGPOST=0.7416;RSQ=0.5470;ERATE=0.0379;THETA=0.0016;AC=1200;AN=2184 GT:DS:GL:BD 0.54945058 1
1 90534916 . CTTT C 15562 PASS INDEL;BAVGPOST=0.797;BRSQ=0.636;LDAF=0.6113;AVGPOST=0.7953;RSQ=0.6590;ERATE=0.0124;THETA=0.0007;AC=1397;AN=2184 GT:DS:GL:BD 0.63965201 1
1 90534937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0027;AVGPOST=0.9985;RSQ=0.7634;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90534940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.837;LDAF=0.1826;AVGPOST=0.9316;RSQ=0.8267;ERATE=0.0230;THETA=0.0007;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 90534960 . CT C 334 PASS INDEL;BAVGPOST=0.951;BRSQ=0.464;LDAF=0.0726;AVGPOST=0.9107;RSQ=0.4581;ERATE=0.0224;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 90534970 . TTC T 51 PASS INDEL;BAVGPOST=0.974;BRSQ=0.510;LDAF=0.0416;AVGPOST=0.9476;RSQ=0.4376;ERATE=0.0139;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 90535017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0278;AVGPOST=0.9978;RSQ=0.9712;ERATE=0.0004;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 90535121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90535165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3104;AVGPOST=0.9974;RSQ=0.9952;ERATE=0.0005;THETA=0.0011;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 90535197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3115;AVGPOST=0.9966;RSQ=0.9943;ERATE=0.0003;THETA=0.0009;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 90535211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8328;ERATE=0.0007;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90535224 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0036;AVGPOST=0.9964;RSQ=0.6339;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90535269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4524;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90535316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90535344 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3110;AVGPOST=0.9970;RSQ=0.9952;ERATE=0.0005;THETA=0.0012;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 90535345 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0257;AVGPOST=0.9995;RSQ=0.9916;ERATE=0.0003;THETA=0.0008;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 90535351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4856;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90535401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0260;AVGPOST=0.9993;RSQ=0.9892;ERATE=0.0002;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 90535404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0257;AVGPOST=0.9995;RSQ=0.9907;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 90535412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90535488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90535648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0320;AVGPOST=0.9989;RSQ=0.9891;ERATE=0.0002;THETA=0.0031;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 90535689 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0246;AVGPOST=0.9990;RSQ=0.9844;ERATE=0.0003;THETA=0.0008;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 90535755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90535823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9265;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90535832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0147;AVGPOST=0.9966;RSQ=0.9100;ERATE=0.0006;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90535894 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.719;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.7945;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90536015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.896;BRSQ=0.752;LDAF=0.2417;AVGPOST=0.9259;RSQ=0.8554;ERATE=0.0032;THETA=0.0006;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 90536017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.873;BRSQ=0.710;LDAF=0.2710;AVGPOST=0.8823;RSQ=0.7814;ERATE=0.0136;THETA=0.0013;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 90536047 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.635;LDAF=0.0057;AVGPOST=0.9953;RSQ=0.6612;ERATE=0.0010;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90536134 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1386;AVGPOST=0.9953;RSQ=0.9862;ERATE=0.0005;THETA=0.0050;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 90536180 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0170;AVGPOST=0.9980;RSQ=0.9502;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90536234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90536322 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7944;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90536407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1277;AVGPOST=0.9986;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 90536477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.1000;AVGPOST=0.9986;RSQ=0.9948;ERATE=0.0003;THETA=0.0012;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 90536483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7338;ERATE=0.0007;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90536577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1700;AVGPOST=0.9920;RSQ=0.9775;ERATE=0.0012;THETA=0.0008;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 90536578 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.1384;AVGPOST=0.9963;RSQ=0.9908;ERATE=0.0004;THETA=0.0037;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 90536628 . A AT 294 PASS INDEL;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7242;ERATE=0.0004;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90536633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90536686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0175;AVGPOST=0.9996;RSQ=0.9893;ERATE=0.0003;THETA=0.0027;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 90536729 . TG T 253 PASS INDEL;BAVGPOST=0.939;BRSQ=0.408;LDAF=0.0709;AVGPOST=0.9103;RSQ=0.4838;ERATE=0.0090;THETA=0.0013;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 90536797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3670;AVGPOST=0.9916;RSQ=0.9871;ERATE=0.0004;THETA=0.0062;AC=801;AN=2184 GT:DS:GL:BD 0.36675823 0
1 90536811 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0096;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90536845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.969;LDAF=0.1288;AVGPOST=0.9932;RSQ=0.9785;ERATE=0.0005;THETA=0.0141;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 90536880 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9416;ERATE=0.0003;THETA=0.0166;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90536944 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9357;ERATE=0.0004;THETA=0.0070;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90536986 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.970;LDAF=0.0454;AVGPOST=0.9956;RSQ=0.9683;ERATE=0.0003;THETA=0.0160;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 90537037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0175;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90537223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.955;LDAF=0.0290;AVGPOST=0.9968;RSQ=0.9576;ERATE=0.0008;THETA=0.0251;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 90537238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0183;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90537307 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6733;ERATE=0.0003;THETA=0.0153;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90537317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.937;LDAF=0.2638;AVGPOST=0.9654;RSQ=0.9462;ERATE=0.0129;THETA=0.0064;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 90537319 . AG A 82 PASS INDEL;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0098;AVGPOST=0.9964;RSQ=0.8623;ERATE=0.0004;THETA=0.0042;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90537320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0122;AVGPOST=0.9979;RSQ=0.9295;ERATE=0.0010;THETA=0.0193;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90537408 . AC A 1273 PASS INDEL;BAVGPOST=0.761;BRSQ=0.345;LDAF=0.2614;AVGPOST=0.7415;RSQ=0.4341;ERATE=0.0473;THETA=0.0203;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 90537432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.924;LDAF=0.4382;AVGPOST=0.9589;RSQ=0.9419;ERATE=0.0085;THETA=0.0136;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 90537444 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0162;AVGPOST=0.9982;RSQ=0.9577;ERATE=0.0004;THETA=0.0048;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90537470 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.951;LDAF=0.0441;AVGPOST=0.9957;RSQ=0.9626;ERATE=0.0013;THETA=0.0226;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 90537581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.944;LDAF=0.4459;AVGPOST=0.9543;RSQ=0.9407;ERATE=0.0022;THETA=0.0140;AC=969;AN=2184 GT:DS:GL:BD 0.44368133 0
1 90537678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.927;LDAF=0.0996;AVGPOST=0.9860;RSQ=0.9402;ERATE=0.0007;THETA=0.0182;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 90537679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6364;ERATE=0.0004;THETA=0.0101;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90537726 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.524;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.4975;ERATE=0.0005;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90537854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.764;LDAF=0.0080;AVGPOST=0.9949;RSQ=0.7604;ERATE=0.0005;THETA=0.0118;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90537858 rs113658846 C CA 2030 PASS INDEL;BAVGPOST=0.938;BRSQ=0.640;LDAF=0.1089;AVGPOST=0.9008;RSQ=0.5797;ERATE=0.0226;THETA=0.0041;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 90537907 . TAGAC T 571 PASS INDEL;BAVGPOST=0.997;BRSQ=0.664;LDAF=0.0039;AVGPOST=0.9974;RSQ=0.7381;ERATE=0.0004;THETA=0.0306;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90537991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8420;ERATE=0.0004;THETA=0.0100;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90538025 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.962;LDAF=0.3938;AVGPOST=0.9846;RSQ=0.9773;ERATE=0.0006;THETA=0.0003;AC=860;AN=2184 GT:DS:GL:BD 0.39377290 0
1 90538079 . CTCT C 110 PASS INDEL;BAVGPOST=0.972;BRSQ=0.077;LDAF=0.1012;AVGPOST=0.8488;RSQ=0.3203;ERATE=0.0080;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 90538095 . T TTC 86 PASS INDEL;BAVGPOST=0.996;BRSQ=0.752;LDAF=0.0080;AVGPOST=0.9939;RSQ=0.6913;ERATE=0.0005;THETA=0.0017;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90538096 . T TC 292 PASS INDEL;BAVGPOST=0.996;BRSQ=0.755;LDAF=0.0084;AVGPOST=0.9945;RSQ=0.7216;ERATE=0.0006;THETA=0.0023;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90538202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.962;LDAF=0.0944;AVGPOST=0.9866;RSQ=0.9425;ERATE=0.0007;THETA=0.0009;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 90538247 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0048;AVGPOST=0.9979;RSQ=0.8076;ERATE=0.0007;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90538292 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.844;LDAF=0.0536;AVGPOST=0.9925;RSQ=0.9468;ERATE=0.0004;THETA=0.0013;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 90538312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.950;LDAF=0.0973;AVGPOST=0.9899;RSQ=0.9578;ERATE=0.0006;THETA=0.0043;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 90538374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8040;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90538390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.892;LDAF=0.0139;AVGPOST=0.9985;RSQ=0.9555;ERATE=0.0004;THETA=0.0074;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90538525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8120;ERATE=0.0008;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90538548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7921;ERATE=0.0008;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90538635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0063;AVGPOST=0.9972;RSQ=0.8242;ERATE=0.0005;THETA=0.0020;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90538787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7777;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90538789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.5857;ERATE=0.0006;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90538814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5561;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90538821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.945;LDAF=0.0543;AVGPOST=0.9979;RSQ=0.9833;ERATE=0.0003;THETA=0.0013;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 90538928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0215;AVGPOST=0.9989;RSQ=0.9765;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90539021 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.705;LDAF=0.0035;AVGPOST=0.9977;RSQ=0.7748;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90539037 . ATTT A 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5027;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90539115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3143;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90539140 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90539365 . T TA 158 PASS INDEL;BAVGPOST=0.998;BRSQ=0.579;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4127;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90539436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0087;AVGPOST=0.9992;RSQ=0.9670;ERATE=0.0002;THETA=0.0019;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90539707 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90539718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8986;ERATE=0.0008;THETA=0.0041;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90539762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9647;ERATE=0.0003;THETA=0.0038;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90539764 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4780;AVGPOST=0.9974;RSQ=0.9962;ERATE=0.0005;THETA=0.0002;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 90539774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90539775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8733;ERATE=0.0012;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90539813 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.7894;AVGPOST=0.9958;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=1724;AN=2184 GT:DS:GL:BD 0.78937727 1
1 90539843 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90539947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9092;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90540259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9302;ERATE=0.0004;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90540260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0778;AVGPOST=0.9968;RSQ=0.9864;ERATE=0.0002;THETA=0.0007;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 90540264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5661;AVGPOST=0.9964;RSQ=0.9948;ERATE=0.0007;THETA=0.0005;AC=1237;AN=2184 GT:DS:GL:BD 0.56639194 1
1 90540279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90540343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90540413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6539;ERATE=0.0011;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90540501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.0794;AVGPOST=0.9987;RSQ=0.9938;ERATE=0.0002;THETA=0.0002;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 90540505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0074;AVGPOST=0.9990;RSQ=0.9508;ERATE=0.0004;THETA=0.0001;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90540537 rs34502064 CCA C 56431 PASS INDEL;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4777;AVGPOST=0.9948;RSQ=0.9914;ERATE=0.0011;THETA=0.0006;AC=1043;AN=2184 GT:DS:GL:BD 0.47756410 0
1 90540565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5653;AVGPOST=0.9981;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=1234;AN=2184 GT:DS:GL:BD 0.56501830 1
1 90540566 . TG T 4512 PASS INDEL;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0203;AVGPOST=0.9993;RSQ=0.9847;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 90540594 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.7865;AVGPOST=0.9979;RSQ=0.9946;ERATE=0.0004;THETA=0.0010;AC=1718;AN=2184 GT:DS:GL:BD 0.78663003 1
1 90540611 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90540635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6227;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90540652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6144;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90540898 . GC G 1082 PASS INDEL;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0117;AVGPOST=0.9990;RSQ=0.9638;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90540958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90541100 . TG T 24 PASS INDEL;BAVGPOST=0.982;BRSQ=0.291;LDAF=0.0152;AVGPOST=0.9794;RSQ=0.4717;ERATE=0.0015;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90541277 rs76453070 A AAT 89226 PASS INDEL;BAVGPOST=0.993;BRSQ=0.432;LDAF=0.9904;AVGPOST=0.9877;RSQ=0.4922;ERATE=0.0022;THETA=0.0002;AC=2170;AN=2184 GT:DS:GL:BD 0.99358976 1
1 90541409 . AAT A 140 PASS INDEL;BAVGPOST=0.964;BRSQ=0.188;LDAF=0.0918;AVGPOST=0.8669;RSQ=0.3538;ERATE=0.0102;THETA=0.0006;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 90541413 . TATATATATA T 2821 PASS INDEL;BAVGPOST=0.472;BRSQ=0.124;LDAF=0.3127;AVGPOST=0.7264;RSQ=0.4979;ERATE=0.0166;THETA=0.0003;AC=543;AN=2184 GT:DS:GL:BD 0.24862637 0
1 90541427 . A ATG 138 PASS INDEL;BAVGPOST=0.978;BRSQ=0.141;LDAF=0.0431;AVGPOST=0.9432;RSQ=0.4414;ERATE=0.0027;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 90541431 . A AAT 1717 PASS INDEL;BAVGPOST=0.534;BRSQ=0.092;LDAF=0.3291;AVGPOST=0.7041;RSQ=0.4282;ERATE=0.0218;THETA=0.0005;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 90541432 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.883;BRSQ=0.168;LDAF=0.1533;AVGPOST=0.7947;RSQ=0.3416;ERATE=0.0141;THETA=0.0007;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 90541440 rs56964837 AAT A 2459 PASS INDEL;BAVGPOST=0.493;BRSQ=0.070;LDAF=0.6514;AVGPOST=0.7388;RSQ=0.5288;ERATE=0.0098;THETA=0.0004;AC=1540;AN=2184 GT:DS:GL:BD 0.70512819 1
1 90541442 rs57764415 TA T 341 PASS INDEL;BAVGPOST=0.730;BRSQ=0.053;LDAF=0.2363;AVGPOST=0.6833;RSQ=0.2733;ERATE=0.0170;THETA=0.0006;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 90541450 rs74188196 TA T 485 PASS INDEL;BAVGPOST=0.505;BRSQ=0.096;LDAF=0.2984;AVGPOST=0.6441;RSQ=0.2763;ERATE=0.0238;THETA=0.0004;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 90541459 . T TAATA 1805 PASS INDEL;BAVGPOST=0.657;BRSQ=0.058;LDAF=0.2743;AVGPOST=0.6613;RSQ=0.2697;ERATE=0.0309;THETA=0.0007;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 90541476 rs71084971 A AAT 7652 PASS INDEL;BAVGPOST=0.713;BRSQ=0.383;LDAF=0.6840;AVGPOST=0.7634;RSQ=0.5553;ERATE=0.0166;THETA=0.0004;AC=1616;AN=2184 GT:DS:GL:BD 0.73992676 1
1 90541570 . CAT C 1918 PASS INDEL;BAVGPOST=0.989;BRSQ=0.920;LDAF=0.0746;AVGPOST=0.9914;RSQ=0.9487;ERATE=0.0012;THETA=0.0007;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 90541660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.359;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6442;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90541693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.708;LDAF=0.0041;AVGPOST=0.9988;RSQ=0.8629;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90541724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0563;AVGPOST=0.9963;RSQ=0.9719;ERATE=0.0007;THETA=0.0004;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 90542029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.419;LDAF=0.0074;AVGPOST=0.9919;RSQ=0.5686;ERATE=0.0014;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90542134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1022;AVGPOST=0.9974;RSQ=0.9894;ERATE=0.0004;THETA=0.0004;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 90542159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0041;AVGPOST=0.9957;RSQ=0.5897;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90542209 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0800;AVGPOST=0.9994;RSQ=0.9965;ERATE=0.0003;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 90542281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.961;LDAF=0.7755;AVGPOST=0.9830;RSQ=0.9616;ERATE=0.0021;THETA=0.0004;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 90542300 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6333;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90542401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6142;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90542560 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0739;AVGPOST=0.9939;RSQ=0.9635;ERATE=0.0008;THETA=0.0005;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 90542586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0028;AVGPOST=0.9953;RSQ=0.3126;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90542930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0720;AVGPOST=0.9947;RSQ=0.9693;ERATE=0.0006;THETA=0.0004;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 90542962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0041;AVGPOST=0.9973;RSQ=0.7384;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90542988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.8979;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90543106 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90543118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4859;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90543195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0203;AVGPOST=0.9996;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 90543256 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9825;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90543398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90543403 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9733;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90543413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8284;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90543659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0089;AVGPOST=0.9991;RSQ=0.9545;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 90543672 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6750;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90543782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90543899 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.782;LDAF=0.0064;AVGPOST=0.9969;RSQ=0.8093;ERATE=0.0012;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90543982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6594;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90543985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5655;AVGPOST=0.9931;RSQ=0.9893;ERATE=0.0019;THETA=0.0004;AC=1235;AN=2184 GT:DS:GL:BD 0.56547618 1
1 90544068 . TA T 1800 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0130;AVGPOST=0.9990;RSQ=0.9689;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90544231 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.4774;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90544275 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5388;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90544323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.8944;AVGPOST=0.9972;RSQ=0.9881;ERATE=0.0004;THETA=0.0006;AC=1954;AN=2184 GT:DS:GL:BD 0.89468867 1
1 90544324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.953;LDAF=0.0686;AVGPOST=0.9963;RSQ=0.9796;ERATE=0.0004;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 90544334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8578;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90544359 . TA T 11306 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1001;AVGPOST=0.9963;RSQ=0.9848;ERATE=0.0004;THETA=0.0003;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 90544409 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6338;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90544527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90544617 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.538;LDAF=0.0189;AVGPOST=0.9788;RSQ=0.5779;ERATE=0.0050;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90544693 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8859;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90544708 rs34127641 G GT 787 PASS INDEL;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0076;AVGPOST=0.9977;RSQ=0.8566;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90544934 . TC T 43 PASS INDEL;BAVGPOST=0.995;BRSQ=0.644;LDAF=0.0088;AVGPOST=0.9915;RSQ=0.6382;ERATE=0.0002;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90544935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.904;LDAF=0.0192;AVGPOST=0.9935;RSQ=0.8645;ERATE=0.0004;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 90544948 . A AT 212 PASS INDEL;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7851;ERATE=0.0004;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90545013 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90545160 rs34593296 C CT 94813 PASS INDEL;BAVGPOST=0.985;BRSQ=0.960;LDAF=0.7594;AVGPOST=0.9747;RSQ=0.9446;ERATE=0.0110;THETA=0.0006;AC=1673;AN=2184 GT:DS:GL:BD 0.76602566 1
1 90545379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4773;AVGPOST=0.9960;RSQ=0.9940;ERATE=0.0004;THETA=0.0002;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 90545407 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0055;AVGPOST=0.9972;RSQ=0.8352;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90545594 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0908;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 90545664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.805;LDAF=0.0736;AVGPOST=0.9963;RSQ=0.9794;ERATE=0.0005;THETA=0.0008;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 90545720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.575;LDAF=0.0113;AVGPOST=0.9898;RSQ=0.6389;ERATE=0.0009;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90545792 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.549;LDAF=0.0372;AVGPOST=0.9691;RSQ=0.6685;ERATE=0.0009;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 90545820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0066;AVGPOST=0.9957;RSQ=0.7428;ERATE=0.0005;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90546186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5751;AVGPOST=0.9942;RSQ=0.9909;ERATE=0.0006;THETA=0.0005;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 90546213 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6598;AVGPOST=0.9933;RSQ=0.9879;ERATE=0.0011;THETA=0.0003;AC=1440;AN=2184 GT:DS:GL:BD 0.65934068 1
1 90546214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.6492;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90546339 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6511;ERATE=0.0002;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90546349 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0774;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0002;THETA=0.0012;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 90546608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90546731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5756;AVGPOST=0.9968;RSQ=0.9947;ERATE=0.0004;THETA=0.0012;AC=1256;AN=2184 GT:DS:GL:BD 0.57509160 1
1 90546841 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0063;AVGPOST=0.9966;RSQ=0.8007;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90546875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90546928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0712;AVGPOST=0.9991;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 90546983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0036;AVGPOST=0.9971;RSQ=0.7135;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90547073 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90547160 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90547243 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9436;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90547300 . TAGAG T 98 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6014;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90547358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0907;AVGPOST=0.9992;RSQ=0.9959;ERATE=0.0003;THETA=0.0014;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 90547394 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90547408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90547497 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6430;ERATE=0.0003;THETA=0.0049;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90547653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90547798 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90547817 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0718;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0002;THETA=0.0004;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 90547849 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90547928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.800;LDAF=0.0094;AVGPOST=0.9960;RSQ=0.8447;ERATE=0.0004;THETA=0.0086;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90547999 . A AT 1099 PASS INDEL;BAVGPOST=0.997;BRSQ=0.902;LDAF=0.0215;AVGPOST=0.9920;RSQ=0.8556;ERATE=0.0007;THETA=0.0013;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 90548075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90548174 rs11411622 C CT 336 PASS INDEL;BAVGPOST=0.975;BRSQ=0.503;LDAF=0.0431;AVGPOST=0.9447;RSQ=0.4766;ERATE=0.0105;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 90548184 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.641;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7913;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90548195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0848;AVGPOST=0.9958;RSQ=0.9794;ERATE=0.0005;THETA=0.0051;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 90548247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8553;ERATE=0.0003;THETA=0.0045;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90548354 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90548562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8399;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90548626 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0038;AVGPOST=0.9976;RSQ=0.7212;ERATE=0.0009;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90548763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0059;AVGPOST=0.9985;RSQ=0.9019;ERATE=0.0003;THETA=0.0021;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90548800 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9646;ERATE=0.0003;THETA=0.0028;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90549076 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9696;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90549097 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5929;ERATE=0.0005;THETA=0.0074;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90549106 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0124;AVGPOST=0.9966;RSQ=0.9020;ERATE=0.0003;THETA=0.0051;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 90549155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.1954;AVGPOST=0.9923;RSQ=0.9820;ERATE=0.0003;THETA=0.0016;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 90549189 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9229;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90549217 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8630;ERATE=0.0006;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90549243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7167;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90549257 . C CTA 641 PASS INDEL;BAVGPOST=0.968;BRSQ=0.599;LDAF=0.0497;AVGPOST=0.9571;RSQ=0.6604;ERATE=0.0057;THETA=0.0034;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 90549259 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.737;LDAF=0.0218;AVGPOST=0.9784;RSQ=0.5951;ERATE=0.0085;THETA=0.0045;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 90549261 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.907;BRSQ=0.732;LDAF=0.2268;AVGPOST=0.8905;RSQ=0.7421;ERATE=0.0514;THETA=0.0007;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 90549263 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.890;BRSQ=0.749;LDAF=0.3000;AVGPOST=0.8817;RSQ=0.7604;ERATE=0.0663;THETA=0.0011;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 90549265 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.749;LDAF=0.0526;AVGPOST=0.9645;RSQ=0.7103;ERATE=0.0103;THETA=0.0007;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 90549297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90549306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5186;ERATE=0.0008;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90549308 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0045;AVGPOST=0.9987;RSQ=0.9016;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90549397 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90549437 . ATATAACTATAG A 404 PASS INDEL;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90549456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6118;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90549480 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6474;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90549506 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7640;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90549597 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8223;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90549735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6520;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90549883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90549892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7986;ERATE=0.0004;THETA=0.0077;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90549901 . T TC 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90549904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9031;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90550032 . G GT 820 PASS INDEL;BAVGPOST=0.997;BRSQ=0.839;LDAF=0.0086;AVGPOST=0.9947;RSQ=0.7646;ERATE=0.0004;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90550150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0185;AVGPOST=0.9988;RSQ=0.9717;ERATE=0.0004;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 90550170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0167;AVGPOST=0.9989;RSQ=0.9780;ERATE=0.0002;THETA=0.0009;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 90550185 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0092;AVGPOST=0.9992;RSQ=0.9663;ERATE=0.0002;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90550204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6193;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90550453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7674;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90550513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4641;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90550520 . T TTCC 34 PASS INDEL;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0041;AVGPOST=0.9983;RSQ=0.8312;ERATE=0.0003;THETA=0.0020;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90550521 . T TCCTC 361 PASS INDEL;BAVGPOST=0.981;BRSQ=0.186;LDAF=0.0501;AVGPOST=0.9205;RSQ=0.3379;ERATE=0.0040;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 90550538 . CT C 222 PASS INDEL;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0045;AVGPOST=0.9958;RSQ=0.6412;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90550559 . T TA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90550597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0270;AVGPOST=0.9977;RSQ=0.9650;ERATE=0.0004;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 90550643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0002;THETA=0.0016;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90550672 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90550688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0077;AVGPOST=0.9990;RSQ=0.9556;ERATE=0.0003;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90550894 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.8405;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90550945 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8929;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90551016 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0205;AVGPOST=0.9998;RSQ=0.9958;ERATE=0.0002;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 90551124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8968;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90551188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8340;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90551381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9805;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90551624 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90551712 . TA T 244 PASS INDEL;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7178;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90551717 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9438;ERATE=0.0002;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90551736 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5243;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90551764 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0561;AVGPOST=0.9961;RSQ=0.9720;ERATE=0.0003;THETA=0.0009;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 90551806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90551893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8264;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90551967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9677;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90552227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90552318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0034;AVGPOST=0.9976;RSQ=0.7346;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90552437 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0004;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90552616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.8141;ERATE=0.0003;THETA=0.0043;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90552640 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7639;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90552763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7239;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90552817 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90552896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8265;ERATE=0.0004;THETA=0.0055;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90552964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0002;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 90552982 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9417;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90552993 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90553182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0098;AVGPOST=0.9976;RSQ=0.9087;ERATE=0.0004;THETA=0.0021;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90553278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0047;AVGPOST=0.9990;RSQ=0.9134;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90553463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.841;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9492;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90553491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2133;AVGPOST=0.9931;RSQ=0.9850;ERATE=0.0004;THETA=0.0006;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 90553578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4494;AVGPOST=0.9914;RSQ=0.9879;ERATE=0.0004;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 90553621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90553637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0756;AVGPOST=0.9993;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 90553722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90553734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8152;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90553742 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90553784 . TG T 1226 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0098;AVGPOST=0.9987;RSQ=0.9414;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90553795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90553817 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6126;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90554007 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7740;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90554040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0748;AVGPOST=0.9987;RSQ=0.9930;ERATE=0.0002;THETA=0.0007;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 90554048 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90554070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8390;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90554075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90554206 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8315;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90554216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5618;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90554254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9156;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90554407 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9933;AVGPOST=0.9991;RSQ=0.9390;ERATE=0.0002;THETA=0.0003;AC=2170;AN=2184 GT:DS:GL:BD 0.99358976 1
1 90554418 . C CT 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7089;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90554695 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90554756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0208;AVGPOST=0.9996;RSQ=0.9910;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 90554838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8619;ERATE=0.0007;THETA=0.0022;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90554882 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9600;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90554926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9099;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90555006 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90555072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90555100 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8422;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90555104 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90555119 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90555155 . CT C 289 PASS INDEL;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8674;ERATE=0.0004;THETA=0.0033;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90555305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90555318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9727;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90555343 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8031;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90555434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90555453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7380;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90555505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0070;AVGPOST=0.9989;RSQ=0.9430;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90555638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9571;ERATE=0.0002;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90555799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9831;ERATE=0.0002;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 90555825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90555907 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1262;AVGPOST=0.9984;RSQ=0.9941;ERATE=0.0004;THETA=0.0006;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 90555910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.546;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8917;ERATE=0.0003;THETA=0.0027;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90555980 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5887;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90556057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7856;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90556078 . CA C 2389 PASS INDEL;BAVGPOST=0.996;BRSQ=0.956;LDAF=0.0289;AVGPOST=0.9958;RSQ=0.9420;ERATE=0.0004;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 90556150 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0893;AVGPOST=0.9984;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 90556163 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0220;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0002;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 90556179 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0041;AVGPOST=0.9988;RSQ=0.8816;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90556232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0210;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0002;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90556342 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0081;AVGPOST=0.9989;RSQ=0.9498;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 90556511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0181;AVGPOST=0.9985;RSQ=0.9670;ERATE=0.0002;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 90556556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0212;AVGPOST=0.9995;RSQ=0.9899;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90556596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0349;AVGPOST=0.9995;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 90556607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0211;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90556712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0073;AVGPOST=0.9983;RSQ=0.9140;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90556870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6244;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90556880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90556980 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8752;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0002;THETA=0.0004;AC=1912;AN=2184 GT:DS:GL:BD 0.87545788 1
1 90556991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7709;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90557006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0153;AVGPOST=0.9958;RSQ=0.9119;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 90557013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5536;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90557045 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8762;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90557218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0211;AVGPOST=0.9997;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90557235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0211;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0002;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90557309 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90557325 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.8198;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90557343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0002;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90557374 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0211;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0002;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90557455 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8052;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90557528 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7780;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90557672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8103;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90557701 . TTTCTC T 80509 PASS INDEL;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.5346;AVGPOST=0.9958;RSQ=0.9941;ERATE=0.0009;THETA=0.0002;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 90557829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8854;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90557832 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6706;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90557866 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8590;ERATE=0.0016;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90557959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8278;ERATE=0.0002;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90557982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7913;AVGPOST=0.9955;RSQ=0.9890;ERATE=0.0009;THETA=0.0003;AC=1731;AN=2184 GT:DS:GL:BD 0.79258239 1
1 90557987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8590;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90558100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90558130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.5463;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0004;THETA=0.0005;AC=1194;AN=2184 GT:DS:GL:BD 0.54670328 1
1 90558152 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.8208;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90558313 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.8341;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90558325 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9101;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90558337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9331;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90558376 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.1926;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90558392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5478;AVGPOST=0.9978;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=1196;AN=2184 GT:DS:GL:BD 0.54761904 1
1 90558484 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.7916;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=1729;AN=2184 GT:DS:GL:BD 0.79166669 1
1 90558490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7458;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90558789 rs59773747 T TA 6776 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0002;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90558793 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90558854 . A AG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5303;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90558859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0070;AVGPOST=0.9988;RSQ=0.9480;ERATE=0.0005;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90558916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90559080 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90559096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0137;AVGPOST=0.9998;RSQ=0.9942;ERATE=0.0002;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90559142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90559155 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9943;ERATE=0.0003;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90559217 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0226;AVGPOST=0.9988;RSQ=0.9847;ERATE=0.0002;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 90559261 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2234;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 90559314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90559316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90559504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7915;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=1729;AN=2184 GT:DS:GL:BD 0.79166669 1
1 90559570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90559640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8364;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90559647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90559683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7918;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=1730;AN=2184 GT:DS:GL:BD 0.79212457 1
1 90559712 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5468;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=1196;AN=2184 GT:DS:GL:BD 0.54761904 1
1 90559742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0907;AVGPOST=0.9967;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 90559748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6030;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90559760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90559762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7278;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90559774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90559805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90559920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7386;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90559977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90559989 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.1946;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 90560046 . TAGG T 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4330;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90560093 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0775;AVGPOST=0.9981;RSQ=0.9900;ERATE=0.0002;THETA=0.0008;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 90560163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6226;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90560406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0058;AVGPOST=0.9979;RSQ=0.8590;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90560524 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.8977;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90560533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8255;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90560553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0002;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 90560554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90560686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0039;AVGPOST=0.9978;RSQ=0.7907;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90560687 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9387;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90560710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.7491;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90560716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6194;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90560717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5664;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90560810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0837;AVGPOST=0.9970;RSQ=0.9843;ERATE=0.0004;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 90560908 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0221;AVGPOST=0.9987;RSQ=0.9747;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90560912 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0180;AVGPOST=0.9993;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 90560916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0215;AVGPOST=0.9994;RSQ=0.9866;ERATE=0.0004;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90561025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9452;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90561364 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0026;AVGPOST=0.9978;RSQ=0.6412;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90561506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0070;AVGPOST=0.9994;RSQ=0.9605;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90561524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0041;AVGPOST=0.9985;RSQ=0.8854;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90561570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90561581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7908;AVGPOST=0.9970;RSQ=0.9921;ERATE=0.0005;THETA=0.0003;AC=1728;AN=2184 GT:DS:GL:BD 0.79120880 1
1 90561669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0221;AVGPOST=0.9987;RSQ=0.9740;ERATE=0.0005;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 90561680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3631;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90561686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0108;AVGPOST=0.9985;RSQ=0.9426;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90561717 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0981;AVGPOST=0.9973;RSQ=0.9879;ERATE=0.0003;THETA=0.0005;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 90561739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0767;AVGPOST=0.9981;RSQ=0.9890;ERATE=0.0003;THETA=0.0003;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 90561780 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8102;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90561845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2252;AVGPOST=0.9968;RSQ=0.9930;ERATE=0.0007;THETA=0.0004;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 90561854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7831;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90561865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1045;AVGPOST=0.9967;RSQ=0.9886;ERATE=0.0004;THETA=0.0003;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 90561866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90561889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=0.9993;RSQ=0.9472;ERATE=0.0002;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90562022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6980;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90562077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0092;AVGPOST=0.9988;RSQ=0.9426;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 90562078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0197;AVGPOST=0.9972;RSQ=0.9454;ERATE=0.0004;THETA=0.0011;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 90562081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90562115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0002;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90562205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90562227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0027;AVGPOST=0.9976;RSQ=0.6414;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90562248 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0548;AVGPOST=0.9947;RSQ=0.9636;ERATE=0.0007;THETA=0.0003;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 90562367 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0045;AVGPOST=0.9927;RSQ=0.4642;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90562488 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0835;AVGPOST=0.9992;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 90562621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0300;AVGPOST=0.9994;RSQ=0.9912;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 90562637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90562778 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.5338;AVGPOST=0.9723;RSQ=0.9617;ERATE=0.0027;THETA=0.0002;AC=1173;AN=2184 GT:DS:GL:BD 0.53708792 1
1 90563209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.774;LDAF=0.0176;AVGPOST=0.9937;RSQ=0.8739;ERATE=0.0005;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 90563227 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4259;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90563334 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.708;BRSQ=0.472;LDAF=0.3925;AVGPOST=0.7952;RSQ=0.7046;ERATE=0.0145;THETA=0.0001;AC=909;AN=2184 GT:DS:GL:BD 0.41620880 0
1 90563468 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.945;LDAF=0.5378;AVGPOST=0.9664;RSQ=0.9495;ERATE=0.0046;THETA=0.0007;AC=1186;AN=2184 GT:DS:GL:BD 0.54304028 1
1 90563880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0042;AVGPOST=0.9968;RSQ=0.7462;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90563902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5444;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90564118 rs67301063 AG A 62654 PASS INDEL;BAVGPOST=0.978;BRSQ=0.944;LDAF=0.7435;AVGPOST=0.9575;RSQ=0.9132;ERATE=0.0117;THETA=0.0005;AC=1640;AN=2184 GT:DS:GL:BD 0.75091577 1
1 90564121 . GA G 34761 PASS INDEL;BAVGPOST=1.000;BRSQ=0;LDAF=0.9983;AVGPOST=0.9967;RSQ=0.3288;ERATE=0.0003;THETA=0.0016;AC=2183;AN=2184 GT:DS:GL:BD 0.99954212 1
1 90564281 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9376;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90564336 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0096;AVGPOST=0.9946;RSQ=0.7680;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90564383 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0934;AVGPOST=0.9936;RSQ=0.9747;ERATE=0.0006;THETA=0.0007;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 90564402 . C CA 14353 PASS INDEL;BAVGPOST=0.989;BRSQ=0.948;LDAF=0.8758;AVGPOST=0.9860;RSQ=0.9466;ERATE=0.0009;THETA=0.0016;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 90564410 rs36018877 A AT 65611 PASS INDEL;BAVGPOST=0.991;BRSQ=0.959;LDAF=0.8745;AVGPOST=0.9977;RSQ=0.9903;ERATE=0.0005;THETA=0.0005;AC=1912;AN=2184 GT:DS:GL:BD 0.87545788 1
1 90564529 rs72510751 G GA 40833 PASS INDEL;BAVGPOST=0.974;BRSQ=0.957;LDAF=0.5368;AVGPOST=0.9765;RSQ=0.9672;ERATE=0.0038;THETA=0.0003;AC=1176;AN=2184 GT:DS:GL:BD 0.53846157 1
1 90564532 . A AC 1618 PASS INDEL;BAVGPOST=0.870;BRSQ=0.782;LDAF=0.4110;AVGPOST=0.8875;RSQ=0.8466;ERATE=0.0014;THETA=0.0002;AC=935;AN=2184 GT:DS:GL:BD 0.42811355 0
1 90564535 . A AG 1967 PASS INDEL;BAVGPOST=0.870;BRSQ=0.782;LDAF=0.4072;AVGPOST=0.8860;RSQ=0.8464;ERATE=0.0018;THETA=0.0004;AC=920;AN=2184 GT:DS:GL:BD 0.42124543 0
1 90564600 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90564678 rs112897329 T TATAAC 153679 PASS INDEL;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.8680;AVGPOST=0.9910;RSQ=0.9671;ERATE=0.0015;THETA=0.0004;AC=1903;AN=2184 GT:DS:GL:BD 0.87133700 1
1 90564718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90564783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5285;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90564806 . A AT 4 PASS INDEL;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3532;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90564833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0071;AVGPOST=0.9992;RSQ=0.9493;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90564930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0052;AVGPOST=0.9986;RSQ=0.8808;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90564984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0121;AVGPOST=0.9994;RSQ=0.9746;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90564997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9603;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90565015 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0160;AVGPOST=0.9975;RSQ=0.9513;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 90565046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7547;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90565108 . CA C 305 PASS INDEL;BAVGPOST=0.994;BRSQ=0.959;LDAF=0.0899;AVGPOST=0.9961;RSQ=0.9790;ERATE=0.0005;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 90565111 . AT A 8474 PASS INDEL;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0934;AVGPOST=0.9937;RSQ=0.9687;ERATE=0.0007;THETA=0.0002;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 90565117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9426;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 90565139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6584;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90565146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8750;AVGPOST=0.9985;RSQ=0.9937;ERATE=0.0004;THETA=0.0002;AC=1912;AN=2184 GT:DS:GL:BD 0.87545788 1
1 90565168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0083;AVGPOST=0.9952;RSQ=0.7589;ERATE=0.0006;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90565326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0853;AVGPOST=0.9952;RSQ=0.9740;ERATE=0.0009;THETA=0.0006;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 90565384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0045;AVGPOST=0.9977;RSQ=0.7621;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90565436 . C CA 829 PASS INDEL;BAVGPOST=0.747;BRSQ=0.266;LDAF=0.2592;AVGPOST=0.7147;RSQ=0.3696;ERATE=0.0343;THETA=0.0003;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 90565594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9503;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90565638 rs11428965 C CA 103155 PASS INDEL;BAVGPOST=0.998;BRSQ=0.550;LDAF=0.9956;AVGPOST=0.9952;RSQ=0.6004;ERATE=0.0008;THETA=0.0003;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 90565913 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0039;AVGPOST=0.9968;RSQ=0.6723;ERATE=0.0012;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90565932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0082;AVGPOST=0.9980;RSQ=0.8879;ERATE=0.0006;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90565945 . CA C 19 PASS INDEL;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0025;AVGPOST=0.9964;RSQ=0.5416;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90565960 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6594;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90566066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9250;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90566169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1135;AVGPOST=0.9983;RSQ=0.9942;ERATE=0.0003;THETA=0.0006;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 90566254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90566383 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7230;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90566397 . TC T 729 PASS INDEL;BAVGPOST=0.995;BRSQ=0.752;LDAF=0.0125;AVGPOST=0.9938;RSQ=0.8127;ERATE=0.0002;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90566429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.4372;AVGPOST=0.9930;RSQ=0.9903;ERATE=0.0004;THETA=0.0008;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 90566435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5855;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90566593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7883;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90566668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0063;AVGPOST=0.9987;RSQ=0.9230;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 90566679 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0829;AVGPOST=0.9992;RSQ=0.9953;ERATE=0.0003;THETA=0.0006;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 90566861 . A AT 20619 PASS INDEL;BAVGPOST=0.962;BRSQ=0.931;LDAF=0.5920;AVGPOST=0.9601;RSQ=0.9383;ERATE=0.0098;THETA=0.0001;AC=1312;AN=2184 GT:DS:GL:BD 0.60073262 1
1 90566862 rs5776036 T TA 81106 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6216;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=1359;AN=2184 GT:DS:GL:BD 0.62225276 1
1 90566864 . A AG 19346 PASS INDEL;BAVGPOST=0.964;BRSQ=0.934;LDAF=0.5819;AVGPOST=0.9488;RSQ=0.9242;ERATE=0.0132;THETA=0.0008;AC=1300;AN=2184 GT:DS:GL:BD 0.59523809 1
1 90567009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90567050 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.877;LDAF=0.0101;AVGPOST=0.9976;RSQ=0.9058;ERATE=0.0003;THETA=0.0014;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 90567097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5266;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90567155 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7401;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90567193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0026;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 90567261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.6076;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90567265 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6220;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=1360;AN=2184 GT:DS:GL:BD 0.62271065 1
1 90567300 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5858;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90567577 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90567691 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0212;AVGPOST=0.9995;RSQ=0.9894;ERATE=0.0002;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90567846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90568014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7094;ERATE=0.0008;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90568071 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.5499;AVGPOST=0.9924;RSQ=0.9900;ERATE=0.0013;THETA=0.0006;AC=1203;AN=2184 GT:DS:GL:BD 0.55082417 1
1 90568082 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0121;AVGPOST=0.9995;RSQ=0.9820;ERATE=0.0002;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 90568148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0770;AVGPOST=0.9982;RSQ=0.9894;ERATE=0.0005;THETA=0.0005;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 90568347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9845;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90568350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0910;AVGPOST=0.9955;RSQ=0.9771;ERATE=0.0013;THETA=0.0015;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 90568364 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5635;AVGPOST=0.9961;RSQ=0.9941;ERATE=0.0008;THETA=0.0031;AC=1232;AN=2184 GT:DS:GL:BD 0.56410259 1
1 90568410 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0764;AVGPOST=0.9965;RSQ=0.9805;ERATE=0.0006;THETA=0.0005;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 90568454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90568582 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.5846;AVGPOST=0.9918;RSQ=0.9879;ERATE=0.0019;THETA=0.0006;AC=1279;AN=2184 GT:DS:GL:BD 0.58562273 1
1 90568589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0212;AVGPOST=0.9994;RSQ=0.9886;ERATE=0.0002;THETA=0.0021;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 90568654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90568664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6669;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90568685 rs34274672 C CAG 74219 PASS INDEL;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5676;AVGPOST=0.9886;RSQ=0.9820;ERATE=0.0034;THETA=0.0025;AC=1239;AN=2184 GT:DS:GL:BD 0.56730771 1
1 90568697 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5570;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90568697 . TAGTG T 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7161;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90568822 . TC T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5778;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90568848 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4353;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90569037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3255;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90569361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.4774;AVGPOST=0.9961;RSQ=0.9941;ERATE=0.0003;THETA=0.0151;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 90569420 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9328;ERATE=0.0002;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90569500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9842;ERATE=0.0002;THETA=0.0112;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 90569532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0002;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90569546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90569679 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90569898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8527;ERATE=0.0015;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 90570021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0078;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90570376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9725;ERATE=0.0003;THETA=0.0040;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 90570391 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.970;LDAF=0.2958;AVGPOST=0.9775;RSQ=0.9608;ERATE=0.0060;THETA=0.0021;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 90570411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9514;ERATE=0.0002;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90570481 . C CA 1078 PASS INDEL;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0078;AVGPOST=0.9987;RSQ=0.9219;ERATE=0.0005;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90570525 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7406;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90570526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7532;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90570773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90570838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0083;AVGPOST=0.9968;RSQ=0.8596;ERATE=0.0009;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90570894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90570922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0088;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90570998 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90571104 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6944;ERATE=0.0002;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 90571322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.505;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90571493 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0065;AVGPOST=0.9976;RSQ=0.8598;ERATE=0.0005;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 90571493 . A AT 4578 PASS INDEL;BAVGPOST=0.990;BRSQ=0.897;LDAF=0.0463;AVGPOST=0.9827;RSQ=0.8587;ERATE=0.0052;THETA=0.0011;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 90571554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4451;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90571560 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0349;AVGPOST=0.9989;RSQ=0.9899;ERATE=0.0004;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 90571609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0348;AVGPOST=0.9992;RSQ=0.9930;ERATE=0.0002;THETA=0.0020;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 90571650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9779;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 90571690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0356;AVGPOST=0.9987;RSQ=0.9881;ERATE=0.0002;THETA=0.0047;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 90571715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0147;AVGPOST=0.9989;RSQ=0.9688;ERATE=0.0004;THETA=0.0001;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 90571736 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4684;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90571774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0372;AVGPOST=0.9979;RSQ=0.9805;ERATE=0.0003;THETA=0.0008;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 90571792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.9098;ERATE=0.0002;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90571809 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0364;AVGPOST=0.9994;RSQ=0.9953;ERATE=0.0002;THETA=0.0031;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 90571826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0364;AVGPOST=0.9992;RSQ=0.9910;ERATE=0.0004;THETA=0.0034;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 90571882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7352;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 90571905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90571911 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0972;AVGPOST=0.9974;RSQ=0.9882;ERATE=0.0008;THETA=0.0006;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 90571924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5398;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90572089 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9771;ERATE=0.0002;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 90572279 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6860;ERATE=0.0009;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 90572283 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90572296 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8825;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90572327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.880;LDAF=0.0185;AVGPOST=0.9949;RSQ=0.8943;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 90572372 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4203;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90572404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90572475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90572490 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6341;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90572555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9833;ERATE=0.0003;THETA=0.0057;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 90572700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5142;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90572714 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0002;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90572733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0129;AVGPOST=0.9977;RSQ=0.9351;ERATE=0.0006;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 90572849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7939;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90573110 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9459;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90573258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.665;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.7986;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90573274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0962;AVGPOST=0.9988;RSQ=0.9946;ERATE=0.0002;THETA=0.0004;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 90573313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.845;LDAF=0.0197;AVGPOST=0.9901;RSQ=0.8128;ERATE=0.0003;THETA=0.0010;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 90573451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0348;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 90573485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90573505 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.824;LDAF=0.0220;AVGPOST=0.9910;RSQ=0.8330;ERATE=0.0003;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 90573523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0354;AVGPOST=0.9988;RSQ=0.9908;ERATE=0.0003;THETA=0.0009;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 90573524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7000;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90573663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5012;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90573713 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.979;LDAF=0.0352;AVGPOST=0.9990;RSQ=0.9895;ERATE=0.0005;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 90573898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7556;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 90573935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.814;LDAF=0.0152;AVGPOST=0.9957;RSQ=0.8870;ERATE=0.0005;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 90573946 . AG A 5169 PASS INDEL;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0662;AVGPOST=0.9882;RSQ=0.9246;ERATE=0.0004;THETA=0.0014;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 90573966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90574027 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0238;AVGPOST=0.9997;RSQ=0.9945;ERATE=0.0003;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 90574187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0238;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0002;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 90574210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0244;AVGPOST=0.9984;RSQ=0.9753;ERATE=0.0006;THETA=0.0010;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 90574252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0243;AVGPOST=0.9990;RSQ=0.9840;ERATE=0.0003;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 90574407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0033;AVGPOST=0.9985;RSQ=0.8152;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 90574411 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6287;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 90574418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0002;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90574478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4789;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90574552 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90574589 . GT G 1211 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9821;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 90574778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0964;AVGPOST=0.9990;RSQ=0.9957;ERATE=0.0002;THETA=0.0007;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 90574801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.554;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5164;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90574803 . A AT 2583 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1146;AVGPOST=0.9982;RSQ=0.9932;ERATE=0.0004;THETA=0.0004;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 90574806 . T TC 63 PASS INDEL;BAVGPOST=0.998;BRSQ=0.681;LDAF=0.0041;AVGPOST=0.9969;RSQ=0.7106;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 90574807 rs111960740 T TA 11301 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1152;AVGPOST=0.9984;RSQ=0.9938;ERATE=0.0005;THETA=0.0023;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 90574943 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1072;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 90575045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0078;AVGPOST=0.9989;RSQ=0.9397;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 90575147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.992;LDAF=0.6401;AVGPOST=0.9885;RSQ=0.9839;ERATE=0.0004;THETA=0.0008;AC=1405;AN=2184 GT:DS:GL:BD 0.64331502 1
1 90575190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.698;LDAF=0.9960;AVGPOST=0.9965;RSQ=0.6249;ERATE=0.0009;THETA=0.0005;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 90575393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5569;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 90575447 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1148;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0