1092
10000
1 168981643 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0302;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168982057 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.947;LDAF=0.0142;AVGPOST=0.9989;RSQ=0.9729;ERATE=0.0018;THETA=0.0122;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 168982161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.9059;ERATE=0.0004;THETA=0.0180;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 168982164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.969;LDAF=0.1037;AVGPOST=0.9949;RSQ=0.9840;ERATE=0.0003;THETA=0.0041;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 168982215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.2753;AVGPOST=0.9929;RSQ=0.9878;ERATE=0.0006;THETA=0.0188;AC=604;AN=2184 GT:DS:GL:BD 0.27655679 0
1 168982313 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7300;ERATE=0.0004;THETA=0.0042;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168982328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5574;ERATE=0.0003;THETA=0.0094;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168982523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0126;AVGPOST=0.9988;RSQ=0.9598;ERATE=0.0003;THETA=0.0016;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 168982590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6578;ERATE=0.0005;THETA=0.0084;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 168982606 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4533;ERATE=0.0003;THETA=0.0090;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168982615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0813;AVGPOST=0.9961;RSQ=0.9855;ERATE=0.0004;THETA=0.0003;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 168982750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7666;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168982863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9274;AVGPOST=0.9994;RSQ=0.9966;ERATE=0.0002;THETA=0.0018;AC=2025;AN=2184 GT:DS:GL:BD 0.92719781 1
1 168982919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8945;AVGPOST=0.9984;RSQ=0.9930;ERATE=0.0004;THETA=0.0011;AC=1953;AN=2184 GT:DS:GL:BD 0.89423078 1
1 168982920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168982942 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5768;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168983030 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.0642;AVGPOST=0.9982;RSQ=0.9904;ERATE=0.0003;THETA=0.0027;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 168983040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6767;ERATE=0.0002;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168983139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0060;AVGPOST=0.9974;RSQ=0.8646;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 168983170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9498;ERATE=0.0003;THETA=0.0023;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 168983293 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168983346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8900;ERATE=0.0003;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 168983402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8934;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 168983521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.551;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.4827;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168983524 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8679;AVGPOST=0.9983;RSQ=0.9941;ERATE=0.0005;THETA=0.0002;AC=1896;AN=2184 GT:DS:GL:BD 0.86813188 1
1 168983703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8247;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168983729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8681;AVGPOST=0.9984;RSQ=0.9943;ERATE=0.0005;THETA=0.0005;AC=1896;AN=2184 GT:DS:GL:BD 0.86813188 1
1 168983779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0035;AVGPOST=0.9980;RSQ=0.7943;ERATE=0.0009;THETA=0.0029;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 168983882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2196;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0002;THETA=0.0009;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 168984071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168984148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6944;AVGPOST=0.9962;RSQ=0.9934;ERATE=0.0004;THETA=0.0025;AC=1519;AN=2184 GT:DS:GL:BD 0.69551283 1
1 168984167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6939;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168984227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5015;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168984236 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168984332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9485;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 168984415 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0050;AVGPOST=0.9980;RSQ=0.8384;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 168984579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168984632 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.974;LDAF=0.1770;AVGPOST=0.9915;RSQ=0.9778;ERATE=0.0003;THETA=0.0004;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 168984677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7700;AVGPOST=0.9972;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=1681;AN=2184 GT:DS:GL:BD 0.76968867 1
1 168984741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7544;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 168984751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6843;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168984756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168984875 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168984917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7632;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168985014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9623;ERATE=0.0002;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 168985062 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168985075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168985104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9005;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 168985111 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0257;AVGPOST=0.9997;RSQ=0.9955;ERATE=0.0002;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 168985308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6898;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168985335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5742;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168985354 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7946;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168985474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7476;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168985704 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 168985712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8902;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168985962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1048;AVGPOST=0.9992;RSQ=0.9960;ERATE=0.0003;THETA=0.0015;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 168986089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.9279;AVGPOST=0.9991;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=2027;AN=2184 GT:DS:GL:BD 0.92811358 1
1 168986159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168986274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8334;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168986374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7035;AVGPOST=0.9975;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=1535;AN=2184 GT:DS:GL:BD 0.70283884 1
1 168986492 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9264;AVGPOST=0.9962;RSQ=0.9796;ERATE=0.0006;THETA=0.0020;AC=2027;AN=2184 GT:DS:GL:BD 0.92811358 1
1 168986572 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9281;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=2027;AN=2184 GT:DS:GL:BD 0.92811358 1
1 168986576 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2913;AVGPOST=0.9969;RSQ=0.9943;ERATE=0.0007;THETA=0.0006;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 168986678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 168986723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7478;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168986784 rs72137774 TCCACAC T 61789 PASS INDEL;BAVGPOST=0.985;BRSQ=0.977;LDAF=0.6885;AVGPOST=0.9719;RSQ=0.9554;ERATE=0.0051;THETA=0.0005;AC=1512;AN=2184 GT:DS:GL:BD 0.69230771 1
1 168986814 . CAT C 1907 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0128;AVGPOST=0.9982;RSQ=0.9337;ERATE=0.0008;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 168986913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 168987044 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168987074 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168987087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1268;AVGPOST=0.9986;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 168987093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168987120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0588;AVGPOST=0.9994;RSQ=0.9960;ERATE=0.0002;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 168987211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0587;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 168987214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8011;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 168987319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7392;ERATE=0.0004;THETA=0.0047;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 168987430 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9701;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 168987432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9544;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 168987527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0153;AVGPOST=0.9978;RSQ=0.9511;ERATE=0.0002;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 168987665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1341;AVGPOST=0.9985;RSQ=0.9957;ERATE=0.0002;THETA=0.0028;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 168987738 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6453;ERATE=0.0002;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168987753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168987799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0002;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168987956 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8908;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 168988092 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7300;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 168988224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4872;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168988311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9634;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 168988376 . CAAT C 128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168988622 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8287;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 168988703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8323;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168988727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168988739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168988827 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6703;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168988995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9546;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 168989036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 168989157 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9432;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 168989176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0002;THETA=0.0009;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 168989350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0094;AVGPOST=0.9985;RSQ=0.9421;ERATE=0.0002;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 168989419 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168989423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8997;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168989503 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5430;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168989553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0110;AVGPOST=0.9996;RSQ=0.9852;ERATE=0.0002;THETA=0.0035;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 168989695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0070;AVGPOST=0.9986;RSQ=0.9169;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 168989732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5195;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168989936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0550;AVGPOST=0.9972;RSQ=0.9791;ERATE=0.0003;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 168990069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9996;RSQ=0.9932;ERATE=0.0003;THETA=0.0008;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 168990099 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1357;AVGPOST=0.9954;RSQ=0.9847;ERATE=0.0005;THETA=0.0002;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 168990106 rs58754680 T TAAAG 1454 PASS INDEL;BAVGPOST=0.954;BRSQ=0.580;LDAF=0.0861;AVGPOST=0.9011;RSQ=0.5173;ERATE=0.0201;THETA=0.0030;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 168990110 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.781;LDAF=0.0333;AVGPOST=0.9856;RSQ=0.8409;ERATE=0.0017;THETA=0.0001;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 168990114 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.832;LDAF=0.2270;AVGPOST=0.9336;RSQ=0.8460;ERATE=0.0136;THETA=0.0037;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 168990118 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.728;LDAF=0.0165;AVGPOST=0.9906;RSQ=0.7802;ERATE=0.0005;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 168990242 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7234;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168990306 . T TA 1435 PASS INDEL;BAVGPOST=0.997;BRSQ=0.937;LDAF=0.0294;AVGPOST=0.9904;RSQ=0.8817;ERATE=0.0016;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 168990328 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.2203;AVGPOST=0.9925;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 168990362 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9189;AVGPOST=0.9977;RSQ=0.9869;ERATE=0.0005;THETA=0.0003;AC=2007;AN=2184 GT:DS:GL:BD 0.91895604 1
1 168990417 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0130;AVGPOST=0.9986;RSQ=0.9623;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 168990539 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168990588 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.490;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6407;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168990612 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0115;AVGPOST=0.9988;RSQ=0.9559;ERATE=0.0004;THETA=0.0001;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 168990641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9989;RSQ=0.9861;ERATE=0.0002;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 168990684 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168990760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8233;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168990775 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9690;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 168990799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0037;AVGPOST=0.9985;RSQ=0.8458;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 168990958 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.7122;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168991086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6908;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168991239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8394;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=1833;AN=2184 GT:DS:GL:BD 0.83928573 1
1 168991280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.2829;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 168991306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.973;LDAF=0.8340;AVGPOST=0.9944;RSQ=0.9851;ERATE=0.0011;THETA=0.0003;AC=1824;AN=2184 GT:DS:GL:BD 0.83516484 1
1 168991329 . CCA C 115 PASS INDEL;BAVGPOST=0.993;BRSQ=0.701;LDAF=0.0219;AVGPOST=0.9751;RSQ=0.5327;ERATE=0.0101;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 168991410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 168991412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1365;AVGPOST=0.9969;RSQ=0.9912;ERATE=0.0003;THETA=0.0004;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 168991439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2291;AVGPOST=0.9954;RSQ=0.9901;ERATE=0.0004;THETA=0.0002;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 168991456 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.899;LDAF=0.0231;AVGPOST=0.9986;RSQ=0.9756;ERATE=0.0004;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 168991512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0046;AVGPOST=0.9978;RSQ=0.7919;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 168991575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0258;AVGPOST=0.9967;RSQ=0.9450;ERATE=0.0006;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 168991601 . C CAA 1435 PASS INDEL;BAVGPOST=0.943;BRSQ=0.767;LDAF=0.1294;AVGPOST=0.9588;RSQ=0.8673;ERATE=0.0028;THETA=0.0007;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 168991607 . A AT 5822 PASS INDEL;BAVGPOST=0.953;BRSQ=0.884;LDAF=0.2629;AVGPOST=0.9456;RSQ=0.8893;ERATE=0.0085;THETA=0.0003;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 168991702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0235;AVGPOST=0.9971;RSQ=0.9490;ERATE=0.0006;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 168991792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1066;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0002;THETA=0.0011;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 168991995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168992089 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9793;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 168992207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0332;AVGPOST=0.9990;RSQ=0.9889;ERATE=0.0003;THETA=0.0008;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 168992220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0809;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0002;THETA=0.0008;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 168992282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5168;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168992286 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0083;AVGPOST=0.9996;RSQ=0.9829;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 168992295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0082;AVGPOST=0.9998;RSQ=0.9893;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 168992393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.586;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.4971;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 168992465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9705;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 168992477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9746;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 168992486 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168992494 . CCAAGAT C 1523 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9670;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 168992516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4917;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168992570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168992694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9110;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168992717 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0799;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0002;THETA=0.0005;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 168992759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8969;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168992880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8922;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 168992890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0233;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0002;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 168992910 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0095;AVGPOST=0.9991;RSQ=0.9569;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 168992913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9077;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168992941 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9792;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 168993100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0233;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0001;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 168993124 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6281;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168993189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6179;ERATE=0.0002;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168993200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7960;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168993259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0078;AVGPOST=0.9979;RSQ=0.8885;ERATE=0.0002;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 168993271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168993336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0681;AVGPOST=0.9969;RSQ=0.9822;ERATE=0.0005;THETA=0.0003;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 168993338 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168993399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0809;AVGPOST=0.9979;RSQ=0.9902;ERATE=0.0004;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 168993521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168993547 . A AG 322 PASS INDEL;BAVGPOST=0.992;BRSQ=0.776;LDAF=0.0202;AVGPOST=0.9958;RSQ=0.9198;ERATE=0.0004;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 168993552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.776;LDAF=0.0086;AVGPOST=0.9961;RSQ=0.8033;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 168993567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.736;LDAF=0.0077;AVGPOST=0.9923;RSQ=0.5845;ERATE=0.0040;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 168993572 . AGAAG A 810 PASS INDEL;BAVGPOST=0.995;BRSQ=0.696;LDAF=0.0079;AVGPOST=0.9941;RSQ=0.6919;ERATE=0.0015;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 168993597 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168993617 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.4554;ERATE=0.0008;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168993632 rs71661505 GAGAA G 12889 PASS INDEL;BAVGPOST=0.981;BRSQ=0.935;LDAF=0.1444;AVGPOST=0.9812;RSQ=0.9496;ERATE=0.0008;THETA=0.0005;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 168993640 . AAGAG A 52958 PASS INDEL;BAVGPOST=0.996;BRSQ=0.512;LDAF=0.9934;AVGPOST=0.9909;RSQ=0.4684;ERATE=0.0010;THETA=0.0004;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 168993647 . AGAG A 857 PASS INDEL;BAVGPOST=0.980;BRSQ=0.847;LDAF=0.0675;AVGPOST=0.9782;RSQ=0.8827;ERATE=0.0006;THETA=0.0028;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 168993651 . AAAGG A 290 PASS INDEL;BAVGPOST=0.997;BRSQ=0.595;LDAF=0.0070;AVGPOST=0.9947;RSQ=0.7190;ERATE=0.0006;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 168993696 . GGGAA G 8482 PASS INDEL;BAVGPOST=0.992;BRSQ=0.954;LDAF=0.0842;AVGPOST=0.9872;RSQ=0.9456;ERATE=0.0029;THETA=0.0002;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 168993735 . TGAAG T 964 PASS INDEL;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0177;AVGPOST=0.9944;RSQ=0.8779;ERATE=0.0008;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 168993757 . GAGAA G 6552 PASS INDEL;BAVGPOST=0.976;BRSQ=0.881;LDAF=0.1001;AVGPOST=0.9932;RSQ=0.9694;ERATE=0.0003;THETA=0.0010;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 168993866 . GA G 880 PASS INDEL;BAVGPOST=0.950;BRSQ=0.552;LDAF=0.1135;AVGPOST=0.8718;RSQ=0.4662;ERATE=0.0320;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 168993901 . CGAAG C 81 PASS INDEL;BAVGPOST=0.996;BRSQ=0.318;LDAF=0.0147;AVGPOST=0.9852;RSQ=0.5846;ERATE=0.0012;THETA=0.0024;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 168994000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7783;AVGPOST=0.9981;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 168994031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168994217 . TGG T 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168994270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4824;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168994348 . GTTA G 4852 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0247;AVGPOST=0.9967;RSQ=0.9453;ERATE=0.0007;THETA=0.0009;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 168994359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.5024;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168994423 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8528;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 168994442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168994513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5447;AVGPOST=0.9974;RSQ=0.9964;ERATE=0.0005;THETA=0.0007;AC=1191;AN=2184 GT:DS:GL:BD 0.54532969 1
1 168994586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9707;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 168994646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0082;AVGPOST=0.9996;RSQ=0.9793;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 168994806 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168994857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168995004 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0105;AVGPOST=0.9997;RSQ=0.9881;ERATE=0.0002;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 168995345 . C CA 102 PASS INDEL;BAVGPOST=0.998;BRSQ=0.695;LDAF=0.0042;AVGPOST=0.9971;RSQ=0.7005;ERATE=0.0008;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 168995384 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0804;AVGPOST=0.9990;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 168995548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0105;AVGPOST=0.9990;RSQ=0.9658;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 168995635 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5457;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=1193;AN=2184 GT:DS:GL:BD 0.54624540 1
1 168995716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.5935;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168995897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6823;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168996020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0012;AVGPOST=0.9979;RSQ=0.2672;ERATE=0.0006;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 168996175 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.598;LDAF=0.0292;AVGPOST=0.9867;RSQ=0.8191;ERATE=0.0008;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 168996204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8336;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 168996214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.979;LDAF=0.1164;AVGPOST=0.9948;RSQ=0.9803;ERATE=0.0007;THETA=0.0003;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 168996360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.730;LDAF=0.0082;AVGPOST=0.9950;RSQ=0.7492;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 168996391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9560;ERATE=0.0003;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 168996427 . TG T 2431 PASS INDEL;BAVGPOST=0.994;BRSQ=0.871;LDAF=0.0228;AVGPOST=0.9932;RSQ=0.8822;ERATE=0.0003;THETA=0.0032;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 168996509 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6070;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168996565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0064;AVGPOST=0.9964;RSQ=0.7845;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 168996624 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1163;AVGPOST=0.9969;RSQ=0.9895;ERATE=0.0004;THETA=0.0003;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 168996644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168996657 . C CA 80 PASS INDEL;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0034;AVGPOST=0.9960;RSQ=0.5297;ERATE=0.0009;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 168996727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168996755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168996770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168996929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0252;AVGPOST=0.9975;RSQ=0.9621;ERATE=0.0006;THETA=0.0009;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 168996958 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7767;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=1697;AN=2184 GT:DS:GL:BD 0.77701467 1
1 168997111 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0066;AVGPOST=0.9979;RSQ=0.8827;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 168997141 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.7696;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 168997364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168997367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7676;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168997420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0792;AVGPOST=0.9988;RSQ=0.9939;ERATE=0.0002;THETA=0.0004;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 168997435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7756;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 168997492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6102;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168997626 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168997753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 168997781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9761;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 168997784 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0784;AVGPOST=0.9990;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 168997816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0788;AVGPOST=0.9993;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 168997926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2314;AVGPOST=0.9963;RSQ=0.9922;ERATE=0.0006;THETA=0.0005;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 168997977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1058;AVGPOST=0.9964;RSQ=0.9849;ERATE=0.0007;THETA=0.0031;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 168997997 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2321;AVGPOST=0.9973;RSQ=0.9940;ERATE=0.0006;THETA=0.0004;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 168998032 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1360;AVGPOST=0.9946;RSQ=0.9842;ERATE=0.0005;THETA=0.0003;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 168998046 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0243;AVGPOST=0.9979;RSQ=0.9652;ERATE=0.0005;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 168998093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7973;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168998126 rs72325733 GAA G 715 PASS INDEL;BAVGPOST=0.949;BRSQ=0.616;LDAF=0.0663;AVGPOST=0.9576;RSQ=0.7438;ERATE=0.0008;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 168998128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.755;LDAF=0.1028;AVGPOST=0.9355;RSQ=0.7372;ERATE=0.0046;THETA=0.0007;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 168998130 . GAA G 888 PASS INDEL;BAVGPOST=0.923;BRSQ=0.605;LDAF=0.1224;AVGPOST=0.8931;RSQ=0.6362;ERATE=0.0083;THETA=0.0007;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 168998132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.742;LDAF=0.1451;AVGPOST=0.9076;RSQ=0.7086;ERATE=0.0085;THETA=0.0004;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 168998136 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.702;LDAF=0.1719;AVGPOST=0.8720;RSQ=0.6422;ERATE=0.0149;THETA=0.0029;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 168998142 rs58923117 GAA G 1257 PASS INDEL;BAVGPOST=0.853;BRSQ=0.354;LDAF=0.1839;AVGPOST=0.7877;RSQ=0.4398;ERATE=0.0182;THETA=0.0011;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 168998152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.874;BRSQ=0.477;LDAF=0.2021;AVGPOST=0.8098;RSQ=0.4804;ERATE=0.0417;THETA=0.0003;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 168998156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.875;BRSQ=0.471;LDAF=0.1838;AVGPOST=0.8194;RSQ=0.4875;ERATE=0.0301;THETA=0.0006;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 168998170 rs58848196 GAA G 1079 PASS INDEL;BAVGPOST=0.792;BRSQ=0.238;LDAF=0.2496;AVGPOST=0.7065;RSQ=0.3308;ERATE=0.0349;THETA=0.0010;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 168998176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.769;BRSQ=0.336;LDAF=0.3286;AVGPOST=0.7495;RSQ=0.4178;ERATE=0.0968;THETA=0.0002;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 168998180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.887;BRSQ=0.377;LDAF=0.1841;AVGPOST=0.7860;RSQ=0.3806;ERATE=0.0571;THETA=0.0004;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 168998194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.841;BRSQ=0.378;LDAF=0.2219;AVGPOST=0.7759;RSQ=0.4228;ERATE=0.0640;THETA=0.0005;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 168998202 rs66479527 AAG A 7118 PASS INDEL;BAVGPOST=0.925;BRSQ=0.228;LDAF=0.9016;AVGPOST=0.8801;RSQ=0.4893;ERATE=0.0084;THETA=0.0004;AC=2045;AN=2184 GT:DS:GL:BD 0.93635529 1
1 168998204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.902;BRSQ=0.400;LDAF=0.1652;AVGPOST=0.8073;RSQ=0.3973;ERATE=0.0508;THETA=0.0003;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 168998204 rs66479527 G GA 350 PASS INDEL;BAVGPOST=0.696;BRSQ=0.115;LDAF=0.2405;AVGPOST=0.7112;RSQ=0.3459;ERATE=0.0245;THETA=0.0008;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 168998206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.844;BRSQ=0.378;LDAF=0.2355;AVGPOST=0.7658;RSQ=0.3957;ERATE=0.0784;THETA=0.0007;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 168998218 . GAA G 84 PASS INDEL;BAVGPOST=0.945;BRSQ=0.285;LDAF=0.0696;AVGPOST=0.9010;RSQ=0.4014;ERATE=0.0092;THETA=0.0013;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 168998220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.433;LDAF=0.1134;AVGPOST=0.8551;RSQ=0.4006;ERATE=0.0257;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 168998280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.609;LDAF=0.0178;AVGPOST=0.9837;RSQ=0.6346;ERATE=0.0039;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 168998360 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0054;AVGPOST=0.9979;RSQ=0.8774;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 168998420 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9989;RSQ=0.9849;ERATE=0.0003;THETA=0.0006;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 168998493 . CT C 247 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8410;ERATE=0.0005;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 168998505 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8295;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168998581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7752;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168998592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7851;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168998600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0259;AVGPOST=0.9995;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 168998602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168998655 . C CA 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.3763;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168998657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9304;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 168998776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5670;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168998781 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3650;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0009;THETA=0.0003;AC=797;AN=2184 GT:DS:GL:BD 0.36492673 0
1 168998783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.868;LDAF=0.0050;AVGPOST=0.9984;RSQ=0.8886;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 168998808 . T TC 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7014;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168998866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0051;AVGPOST=0.9993;RSQ=0.9360;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 168998868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0052;AVGPOST=0.9981;RSQ=0.9053;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 168998906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5888;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168998971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9394;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 168998987 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6996;ERATE=0.0010;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 168999108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0458;AVGPOST=0.9988;RSQ=0.9892;ERATE=0.0005;THETA=0.0002;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 168999182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1350;AVGPOST=0.9986;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 168999350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0223;AVGPOST=0.9973;RSQ=0.9557;ERATE=0.0002;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 168999403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8857;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 168999411 rs10637350 C CTT 89389 PASS INDEL;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5443;AVGPOST=0.9850;RSQ=0.9792;ERATE=0.0041;THETA=0.0002;AC=1194;AN=2184 GT:DS:GL:BD 0.54670328 1
1 168999630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5511;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 168999687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8797;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 168999781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.1003;AVGPOST=0.9991;RSQ=0.9958;ERATE=0.0003;THETA=0.0007;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 168999908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0052;AVGPOST=0.9980;RSQ=0.8554;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 168999912 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6925;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168999925 . AAACT A 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6733;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 168999994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6668;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169000100 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0096;AVGPOST=0.9994;RSQ=0.9694;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169000109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2319;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 169000112 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8510;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169000193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5360;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169000281 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9630;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169000292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1056;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0007;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 169000391 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1146;AVGPOST=0.9984;RSQ=0.9930;ERATE=0.0005;THETA=0.0002;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 169000409 . AGC A 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0045;AVGPOST=0.9927;RSQ=0.3945;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169000494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1147;AVGPOST=0.9992;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 169000612 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0232;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0002;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 169000644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.8638;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169000684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169000744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6692;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169000854 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6493;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169000859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8776;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169000906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8154;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169001025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0061;AVGPOST=0.9985;RSQ=0.9027;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169001031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9834;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169001085 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8194;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169001106 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5209;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169001185 rs71118957 ATTTCT A 26099 PASS INDEL;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1323;AVGPOST=0.9981;RSQ=0.9934;ERATE=0.0003;THETA=0.0008;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 169001199 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9996;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 169001232 . CTCTT C 231 PASS INDEL;BAVGPOST=0.998;BRSQ=0.776;LDAF=0.0064;AVGPOST=0.9962;RSQ=0.7532;ERATE=0.0007;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169001236 . TTC T 10505 PASS INDEL;BAVGPOST=0.994;BRSQ=0.968;LDAF=0.1070;AVGPOST=0.9962;RSQ=0.9832;ERATE=0.0007;THETA=0.0005;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 169001274 . CCTT C 823 PASS INDEL;BAVGPOST=0.996;BRSQ=0.737;LDAF=0.0081;AVGPOST=0.9940;RSQ=0.6913;ERATE=0.0007;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169001293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0995;AVGPOST=0.9988;RSQ=0.9942;ERATE=0.0002;THETA=0.0002;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 169001320 rs72407435 TCTC T 15138 PASS INDEL;BAVGPOST=0.917;BRSQ=0.786;LDAF=0.2635;AVGPOST=0.8707;RSQ=0.7444;ERATE=0.0442;THETA=0.0004;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 169001338 . TC T 594 PASS INDEL;BAVGPOST=0.869;BRSQ=0.491;LDAF=0.1299;AVGPOST=0.8707;RSQ=0.5925;ERATE=0.0097;THETA=0.0004;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 169001403 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9770;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169001473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5448;AVGPOST=0.9945;RSQ=0.9915;ERATE=0.0010;THETA=0.0002;AC=1191;AN=2184 GT:DS:GL:BD 0.54532969 1
1 169001494 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8516;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169001510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1211;AVGPOST=0.9872;RSQ=0.9567;ERATE=0.0016;THETA=0.0003;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 169001519 . A AAT 217 PASS INDEL;BAVGPOST=0.995;BRSQ=0.480;LDAF=0.0168;AVGPOST=0.9799;RSQ=0.5323;ERATE=0.0018;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169001551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.608;LDAF=0.0315;AVGPOST=0.9649;RSQ=0.5496;ERATE=0.0069;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 169001713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0798;AVGPOST=0.9984;RSQ=0.9911;ERATE=0.0004;THETA=0.0002;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 169001757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169001812 . A AT 6275 PASS INDEL;BAVGPOST=0.994;BRSQ=0.965;LDAF=0.0804;AVGPOST=0.9969;RSQ=0.9836;ERATE=0.0009;THETA=0.0007;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 169001814 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0763;AVGPOST=0.9991;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 169001881 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0002;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169001966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7890;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169001975 . TA T 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3697;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169002081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5711;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169002172 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169002246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9735;ERATE=0.0002;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169002372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169002377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.968;LDAF=0.0790;AVGPOST=0.9985;RSQ=0.9913;ERATE=0.0004;THETA=0.0005;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169002381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4286;AVGPOST=0.9955;RSQ=0.9935;ERATE=0.0006;THETA=0.0001;AC=939;AN=2184 GT:DS:GL:BD 0.42994505 0
1 169002405 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4753;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169002472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0788;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169002480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0024;AVGPOST=0.9961;RSQ=0.3555;ERATE=0.0008;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169002515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7218;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169002567 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0787;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0004;THETA=0.0001;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169002599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0793;AVGPOST=0.9993;RSQ=0.9963;ERATE=0.0004;THETA=0.0002;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 169002706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.647;LDAF=0.9923;AVGPOST=0.9926;RSQ=0.6134;ERATE=0.0037;THETA=0.0005;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 169002727 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0064;AVGPOST=0.9996;RSQ=0.9703;ERATE=0.0002;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169002803 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0255;AVGPOST=0.9994;RSQ=0.9909;ERATE=0.0002;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 169002827 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0792;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 169002899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4815;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169002905 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0790;AVGPOST=0.9992;RSQ=0.9958;ERATE=0.0002;THETA=0.0004;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169002948 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169002991 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169003012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6565;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169003111 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.8112;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169003201 . G GT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.4923;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169003294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169003383 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0072;AVGPOST=0.9984;RSQ=0.9196;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169003853 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6087;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169004091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3492;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0006;THETA=0.0003;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 169004176 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3482;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0005;THETA=0.0022;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 169004289 . TGAG T 1301 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169004329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0786;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0002;THETA=0.0002;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169004358 MERGED_DEL_2_6219 GTGGAAAGACCACTGGTTGTGGATTCTGAACATGAACCCCTGGCTCTAGAGTGACCTAAGGCAGAGCCTCCCAGCCCTTTTATGCGGAAGTACCCAGATTGGCAGTGAAGAGAGCTGCATTCCCCATGAAAACAAAAAGTGGCCTAATGGGAGTGAGGTTTATTTTAAAGTCTCAAATTTCCCTACCTCT G . . SV;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0814;AVGPOST=0.9968;RSQ=0.9824;ERATE=0.0009;THETA=0.0005;CIEND=-52,101;CIPOS=-69,88;END=169005229;HOMLEN=3;HOMSEQ=TGG;SOURCE=AssembledBreakpoints_16900435 GT:DS:GL:BD 0.08058608 0
1 169004371 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9993;RSQ=0.9513;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169004385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9668;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169004412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169004467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0111;AVGPOST=0.9979;RSQ=0.9299;ERATE=0.0005;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169004526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169004610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169004633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6037;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169004779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0804;AVGPOST=0.9972;RSQ=0.9873;ERATE=0.0003;THETA=0.0005;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 169004813 rs71557647 AT A 12786 PASS INDEL;BAVGPOST=0.973;BRSQ=0.908;LDAF=0.1379;AVGPOST=0.9898;RSQ=0.9704;ERATE=0.0009;THETA=0.0003;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 169004828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4629;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169004890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4876;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169004892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4644;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169004914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0261;AVGPOST=0.9984;RSQ=0.9755;ERATE=0.0004;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 169005019 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169005022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5267;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169005138 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1113;AVGPOST=0.9988;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 169005245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0943;AVGPOST=0.9982;RSQ=0.9919;ERATE=0.0003;THETA=0.0006;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 169005248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8962;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169005304 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1001;AVGPOST=0.9991;RSQ=0.9958;ERATE=0.0002;THETA=0.0003;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 169005342 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7014;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169005419 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0457;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 169005516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9838;ERATE=0.0002;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169005526 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.7008;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169005531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8251;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169005547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1180;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0002;THETA=0.0002;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 169005574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9603;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169005592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7957;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169005814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9271;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169006021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169006091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169006143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169006159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7774;AVGPOST=0.9977;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=1699;AN=2184 GT:DS:GL:BD 0.77793038 1
1 169006177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1335;AVGPOST=0.9977;RSQ=0.9926;ERATE=0.0004;THETA=0.0001;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 169006355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.5003;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169006400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.931;LDAF=0.0170;AVGPOST=0.9959;RSQ=0.9102;ERATE=0.0005;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 169006494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.511;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169006627 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169006682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1179;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 169006727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169006801 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6457;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169006802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169006876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.8005;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169006920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8631;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169007046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0786;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169007144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0090;AVGPOST=0.9983;RSQ=0.9287;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169007173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7856;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169007295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.820;LDAF=0.0067;AVGPOST=0.9967;RSQ=0.8016;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169007383 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169007483 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7560;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169007516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0002;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169007533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0995;AVGPOST=0.9993;RSQ=0.9963;ERATE=0.0004;THETA=0.0009;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 169007614 . AT A 13099 PASS INDEL;BAVGPOST=0.857;BRSQ=0.783;LDAF=0.4319;AVGPOST=0.8357;RSQ=0.7865;ERATE=0.0288;THETA=0.0002;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 169007615 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.5333;AVGPOST=0.9773;RSQ=0.9698;ERATE=0.0060;THETA=0.0007;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 169007667 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9229;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169007678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.9172;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169007753 . C CT 10774 PASS INDEL;BAVGPOST=0.934;BRSQ=0.810;LDAF=0.2055;AVGPOST=0.9573;RSQ=0.9127;ERATE=0.0030;THETA=0.0007;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 169007760 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9735;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169007867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8515;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169008093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0276;AVGPOST=0.9975;RSQ=0.9679;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169008096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169008246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0785;AVGPOST=0.9993;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169008269 . C CA 11694 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0801;AVGPOST=0.9968;RSQ=0.9832;ERATE=0.0004;THETA=0.0006;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 169008337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8893;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169008339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0785;AVGPOST=0.9988;RSQ=0.9929;ERATE=0.0003;THETA=0.0011;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169008344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9994;RSQ=0.9890;ERATE=0.0003;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 169008373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169008394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8397;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169008406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169008450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0802;AVGPOST=0.9973;RSQ=0.9888;ERATE=0.0003;THETA=0.0005;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169008494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1001;AVGPOST=0.9973;RSQ=0.9883;ERATE=0.0006;THETA=0.0003;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 169008523 . C CA 1655 PASS INDEL;BAVGPOST=0.984;BRSQ=0.704;LDAF=0.0307;AVGPOST=0.9785;RSQ=0.7461;ERATE=0.0011;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 169008524 rs111809325 A AC 13123 PASS INDEL;BAVGPOST=0.846;BRSQ=0.744;LDAF=0.6200;AVGPOST=0.7912;RSQ=0.7160;ERATE=0.0470;THETA=0.0006;AC=1451;AN=2184 GT:DS:GL:BD 0.66437727 1
1 169008525 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.955;LDAF=0.7521;AVGPOST=0.9596;RSQ=0.9351;ERATE=0.0115;THETA=0.0005;AC=1661;AN=2184 GT:DS:GL:BD 0.76053113 1
1 169008527 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0175;AVGPOST=0.9983;RSQ=0.9580;ERATE=0.0004;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169008545 . T TA 194 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3561;ERATE=0.0009;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169008580 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7952;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169008635 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0040;AVGPOST=0.9930;RSQ=0.3494;ERATE=0.0012;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169008673 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9720;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169008718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8798;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169008767 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169008809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9632;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169008848 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3938;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169009034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5457;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=1194;AN=2184 GT:DS:GL:BD 0.54670328 1
1 169009054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169009087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0486;AVGPOST=0.9986;RSQ=0.9896;ERATE=0.0003;THETA=0.0002;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 169009275 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1004;AVGPOST=0.9989;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 169009374 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7762;AVGPOST=0.9958;RSQ=0.9925;ERATE=0.0003;THETA=0.0011;AC=1699;AN=2184 GT:DS:GL:BD 0.77793038 1
1 169009417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8621;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169009456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.846;LDAF=0.0091;AVGPOST=0.9978;RSQ=0.9014;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169009510 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169009534 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0065;AVGPOST=0.9993;RSQ=0.9486;ERATE=0.0003;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169009610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4805;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169009697 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8553;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169009788 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5469;AVGPOST=0.9930;RSQ=0.9906;ERATE=0.0004;THETA=0.0032;AC=1193;AN=2184 GT:DS:GL:BD 0.54624540 1
1 169009797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.936;LDAF=0.0290;AVGPOST=0.9966;RSQ=0.9498;ERATE=0.0003;THETA=0.0068;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 169009803 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.7093;ERATE=0.0003;THETA=0.0038;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169009836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7396;ERATE=0.0002;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169009938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169010072 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.811;LDAF=0.0122;AVGPOST=0.9968;RSQ=0.8992;ERATE=0.0006;THETA=0.0038;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169010130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.1039;AVGPOST=0.9936;RSQ=0.9775;ERATE=0.0003;THETA=0.0101;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 169010282 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0050;AVGPOST=0.9983;RSQ=0.8696;ERATE=0.0003;THETA=0.0054;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169010345 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5324;ERATE=0.0003;THETA=0.0107;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169010361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6619;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169010362 . AC A 515 PASS INDEL;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0050;AVGPOST=0.9975;RSQ=0.7931;ERATE=0.0004;THETA=0.0044;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169010704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169010719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0083;AVGPOST=0.9981;RSQ=0.9083;ERATE=0.0004;THETA=0.0075;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169010720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0386;AVGPOST=0.9987;RSQ=0.9863;ERATE=0.0003;THETA=0.0096;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 169010823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8874;ERATE=0.0003;THETA=0.0048;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169010824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.969;LDAF=0.0836;AVGPOST=0.9902;RSQ=0.9517;ERATE=0.0005;THETA=0.0311;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 169010991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0003;THETA=0.0110;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169011040 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0003;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169011054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0150;AVGPOST=0.9975;RSQ=0.9381;ERATE=0.0002;THETA=0.0075;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169011073 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0199;AVGPOST=0.9990;RSQ=0.9774;ERATE=0.0003;THETA=0.0065;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169011136 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0201;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169011148 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6025;ERATE=0.0002;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169011169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5936;ERATE=0.0002;THETA=0.0088;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169011173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.939;LDAF=0.1591;AVGPOST=0.9749;RSQ=0.9330;ERATE=0.0050;THETA=0.0126;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 169011223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0171;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169011269 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0089;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169011289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9496;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169011316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.589;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6831;ERATE=0.0002;THETA=0.0136;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169011368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8695;ERATE=0.0004;THETA=0.0123;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169011394 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.3653;ERATE=0.0003;THETA=0.0047;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169011451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169011479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0067;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169011584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6263;ERATE=0.0003;THETA=0.0282;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169011585 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5722;ERATE=0.0003;THETA=0.0125;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169011650 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0119;AVGPOST=0.9989;RSQ=0.9639;ERATE=0.0002;THETA=0.0103;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169011654 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0131;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169011749 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169011752 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0086;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169011855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7728;ERATE=0.0002;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169011949 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0003;THETA=0.0116;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169012077 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0339;AVGPOST=0.9989;RSQ=0.9892;ERATE=0.0002;THETA=0.0145;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 169012124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.3341;AVGPOST=0.9872;RSQ=0.9779;ERATE=0.0016;THETA=0.0024;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 169012143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169012151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9520;ERATE=0.0003;THETA=0.0016;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169012176 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0114;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0022;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169012244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2570;AVGPOST=0.9922;RSQ=0.9859;ERATE=0.0004;THETA=0.0005;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 169012353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7853;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169012434 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6228;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169012450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0491;AVGPOST=0.9960;RSQ=0.9704;ERATE=0.0004;THETA=0.0025;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 169012453 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5535;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169012502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169012553 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8715;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169012772 . AAGCC A 183 PASS INDEL;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6772;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169012795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.462;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169012907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3751;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0004;THETA=0.0006;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 169012908 . GC G 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7023;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169012985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2599;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0008;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 169013126 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0061;AVGPOST=0.9981;RSQ=0.8909;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169013129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169013142 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0263;AVGPOST=0.9987;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 169013154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169013212 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6548;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169013256 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0759;AVGPOST=0.9984;RSQ=0.9922;ERATE=0.0002;THETA=0.0006;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 169013292 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169013348 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9998;RSQ=0.9922;ERATE=0.0002;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169013356 . G GC 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169013371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169013428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2600;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0008;THETA=0.0003;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 169013883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3921;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0005;THETA=0.0006;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 169013935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3918;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0004;THETA=0.0009;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 169013994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0762;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0002;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 169014097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0557;AVGPOST=0.9978;RSQ=0.9847;ERATE=0.0003;THETA=0.0008;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 169014254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9141;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169014255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169014317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169014423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3902;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=851;AN=2184 GT:DS:GL:BD 0.38965201 0
1 169014435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3925;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=857;AN=2184 GT:DS:GL:BD 0.39239928 0
1 169014446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8765;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169014447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6856;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169014472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8557;ERATE=0.0002;THETA=0.0030;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169014520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169014610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0348;AVGPOST=0.9984;RSQ=0.9786;ERATE=0.0004;THETA=0.0008;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 169014698 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.1756;AVGPOST=0.9939;RSQ=0.9864;ERATE=0.0003;THETA=0.0005;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 169014702 . GAC G 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5594;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169014703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9827;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169014875 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3854;AVGPOST=0.9939;RSQ=0.9910;ERATE=0.0006;THETA=0.0023;AC=840;AN=2184 GT:DS:GL:BD 0.38461539 0
1 169014975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.8442;AVGPOST=0.9920;RSQ=0.9810;ERATE=0.0003;THETA=0.0004;AC=1846;AN=2184 GT:DS:GL:BD 0.84523809 1
1 169014976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0007;AVGPOST=0.9987;RSQ=0.2167;ERATE=0.0003;THETA=0.0039;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169015088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0062;AVGPOST=0.9982;RSQ=0.8952;ERATE=0.0003;THETA=0.0014;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169015090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169015114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7694;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169015225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5614;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169015306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169015337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.836;LDAF=0.0045;AVGPOST=0.9974;RSQ=0.8150;ERATE=0.0006;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169015430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0346;AVGPOST=0.9989;RSQ=0.9852;ERATE=0.0003;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 169015452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8878;ERATE=0.0002;THETA=0.0085;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169015517 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169015554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0355;AVGPOST=0.9968;RSQ=0.9689;ERATE=0.0002;THETA=0.0028;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 169015617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9540;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169015900 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8974;ERATE=0.0003;THETA=0.0096;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169015970 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0679;AVGPOST=0.9980;RSQ=0.9879;ERATE=0.0002;THETA=0.0028;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 169016086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0002;THETA=0.0085;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169016201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9006;ERATE=0.0002;THETA=0.0047;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169016230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0219;AVGPOST=0.9984;RSQ=0.9729;ERATE=0.0003;THETA=0.0028;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169016234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169016346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.3931;AVGPOST=0.9940;RSQ=0.9913;ERATE=0.0006;THETA=0.0008;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 169016354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169016358 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8567;ERATE=0.0002;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169016395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0177;AVGPOST=0.9990;RSQ=0.9779;ERATE=0.0004;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 169016436 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9990;RSQ=0.9152;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169016604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1709;AVGPOST=0.9974;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169016609 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9455;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169016633 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8301;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169016651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.9068;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169016679 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8497;AVGPOST=0.9972;RSQ=0.9924;ERATE=0.0003;THETA=0.0005;AC=1857;AN=2184 GT:DS:GL:BD 0.85027474 1
1 169016763 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169016881 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0873;AVGPOST=0.9991;RSQ=0.9960;ERATE=0.0002;THETA=0.0013;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 169017040 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169017189 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7908;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169017257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.9101;ERATE=0.0002;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169017324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169017352 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169017361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0089;AVGPOST=0.9984;RSQ=0.9342;ERATE=0.0002;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169017419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.4087;AVGPOST=0.9951;RSQ=0.9926;ERATE=0.0006;THETA=0.0028;AC=890;AN=2184 GT:DS:GL:BD 0.40750915 0
1 169017662 . CAT C 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5142;ERATE=0.0005;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169017733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9637;ERATE=0.0002;THETA=0.0072;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169017784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8636;ERATE=0.0003;THETA=0.0071;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169017841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169017892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169017934 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7180;ERATE=0.0003;THETA=0.0052;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169017982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6165;ERATE=0.0003;THETA=0.0054;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169018297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0205;AVGPOST=0.9995;RSQ=0.9894;ERATE=0.0004;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 169018369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.8067;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169018388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.5014;AVGPOST=0.9937;RSQ=0.9911;ERATE=0.0007;THETA=0.0027;AC=1092;AN=2184 GT:DS:GL:BD 0.50000000 0
1 169018424 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0002;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169018472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8156;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169018547 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7545;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169018548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9650;ERATE=0.0003;THETA=0.0112;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169018599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0032;AVGPOST=0.9965;RSQ=0.5690;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169018617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6913;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169018684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8586;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169018704 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169018806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0851;AVGPOST=0.9978;RSQ=0.9892;ERATE=0.0004;THETA=0.0043;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 169018858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169018902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8391;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=1834;AN=2184 GT:DS:GL:BD 0.83974361 1
1 169018933 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8284;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169018985 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6910;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169018996 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169019050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9229;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169019059 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0085;AVGPOST=0.9985;RSQ=0.9224;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169019188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5799;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169019342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169019479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169019482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0738;AVGPOST=0.9987;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 169019489 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6755;ERATE=0.0004;THETA=0.0057;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169019540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3611;AVGPOST=0.9955;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 169019640 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169019643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5421;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169019728 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4815;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169019776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0061;AVGPOST=0.9985;RSQ=0.8881;ERATE=0.0007;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169019808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8641;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169019890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9539;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169019920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169019992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9127;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169020007 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6730;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169020008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0243;AVGPOST=0.9939;RSQ=0.8960;ERATE=0.0028;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 169020074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169020079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5657;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169020142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169020222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0798;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 169020472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6445;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169020529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7123;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169020549 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0332;AVGPOST=0.9993;RSQ=0.9922;ERATE=0.0002;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 169020567 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169020640 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169020702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1426;AVGPOST=0.9979;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 169020703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0219;AVGPOST=0.9995;RSQ=0.9880;ERATE=0.0002;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 169020740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169020791 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0044;AVGPOST=0.9952;RSQ=0.5760;ERATE=0.0021;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169020812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6273;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169020826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0002;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169021202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9866;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169021287 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169021288 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169021324 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0732;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0002;THETA=0.0004;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 169021339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9513;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169021391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169021471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0003;AVGPOST=0.9996;RSQ=0.5697;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169021637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8207;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169021646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7355;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169021668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0619;AVGPOST=0.9964;RSQ=0.9777;ERATE=0.0003;THETA=0.0001;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 169021747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5468;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169021781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169021902 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.959;LDAF=0.3636;AVGPOST=0.9903;RSQ=0.9848;ERATE=0.0007;THETA=0.0004;AC=792;AN=2184 GT:DS:GL:BD 0.36263737 0
1 169021903 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0051;AVGPOST=0.9967;RSQ=0.7782;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169022007 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9154;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169022020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0138;AVGPOST=0.9993;RSQ=0.9746;ERATE=0.0002;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169022029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169022047 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0362;AVGPOST=0.9989;RSQ=0.9903;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 169022102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169022196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0357;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0002;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 169022216 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6969;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169022267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169022276 . CTG C 1734 PASS INDEL;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0147;AVGPOST=0.9989;RSQ=0.9710;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169022345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5582;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169022372 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.8990;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169022389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0729;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0002;THETA=0.0003;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 169022390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169022399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169022554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169022617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8399;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0002;THETA=0.0004;AC=1835;AN=2184 GT:DS:GL:BD 0.84020144 1
1 169022734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0902;AVGPOST=0.9987;RSQ=0.9938;ERATE=0.0003;THETA=0.0058;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 169022760 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6061;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169022767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169022903 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.3625;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 169022929 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0089;AVGPOST=0.9991;RSQ=0.9528;ERATE=0.0002;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169022933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9561;ERATE=0.0002;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169023112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8137;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169023146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169023211 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169023223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9994;RSQ=0.9621;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169023256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169023349 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9384;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169023518 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8878;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169023650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0321;AVGPOST=0.9979;RSQ=0.9810;ERATE=0.0002;THETA=0.0007;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 169023666 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5327;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169023684 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8908;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169023691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.7962;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169023693 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169023775 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9650;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169023827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8928;ERATE=0.0011;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169023843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0960;AVGPOST=0.9983;RSQ=0.9923;ERATE=0.0005;THETA=0.0004;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 169023865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0991;AVGPOST=0.9976;RSQ=0.9906;ERATE=0.0007;THETA=0.0013;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 169023923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169024128 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9537;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169024386 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169024421 . C CT 8711 PASS INDEL;BAVGPOST=0.940;BRSQ=0.901;LDAF=0.4900;AVGPOST=0.9026;RSQ=0.8621;ERATE=0.0197;THETA=0.0003;AC=1096;AN=2184 GT:DS:GL:BD 0.50183153 1
1 169024423 rs35930084 T TC 46941 PASS INDEL;BAVGPOST=0.978;BRSQ=0.972;LDAF=0.5399;AVGPOST=0.9768;RSQ=0.9706;ERATE=0.0006;THETA=0.0006;AC=1183;AN=2184 GT:DS:GL:BD 0.54166669 1
1 169024425 . C CA 12774 PASS INDEL;BAVGPOST=0.950;BRSQ=0.917;LDAF=0.5061;AVGPOST=0.9309;RSQ=0.9064;ERATE=0.0114;THETA=0.0006;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 169024568 . AT A 135 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0035;AVGPOST=0.9966;RSQ=0.6363;ERATE=0.0004;THETA=0.0035;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169024587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8263;ERATE=0.0005;THETA=0.0040;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169024600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169024620 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9055;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169024660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0066;AVGPOST=0.9991;RSQ=0.9406;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169024737 . C CTT 4748 PASS INDEL;BAVGPOST=0.977;BRSQ=0.868;LDAF=0.0944;AVGPOST=0.9834;RSQ=0.9307;ERATE=0.0012;THETA=0.0007;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 169024745 . CTT C 2291 PASS INDEL;BAVGPOST=0.887;BRSQ=0.563;LDAF=0.1665;AVGPOST=0.8767;RSQ=0.6744;ERATE=0.0084;THETA=0.0002;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 169024747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.899;BRSQ=0.752;LDAF=0.2251;AVGPOST=0.8878;RSQ=0.7448;ERATE=0.0129;THETA=0.0011;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 169024751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.905;BRSQ=0.776;LDAF=0.2105;AVGPOST=0.9299;RSQ=0.8457;ERATE=0.0007;THETA=0.0006;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 169024755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.907;BRSQ=0.759;LDAF=0.2052;AVGPOST=0.9284;RSQ=0.8334;ERATE=0.0012;THETA=0.0002;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 169024759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.900;BRSQ=0.709;LDAF=0.1938;AVGPOST=0.9277;RSQ=0.8189;ERATE=0.0005;THETA=0.0006;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 169024763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.894;BRSQ=0.650;LDAF=0.1830;AVGPOST=0.9203;RSQ=0.7886;ERATE=0.0020;THETA=0.0010;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 169024787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.861;BRSQ=0.450;LDAF=0.2199;AVGPOST=0.7952;RSQ=0.4517;ERATE=0.0755;THETA=0.0057;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 169024807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.834;BRSQ=0.388;LDAF=0.2501;AVGPOST=0.7712;RSQ=0.4209;ERATE=0.0903;THETA=0.0004;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 169024811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.825;BRSQ=0.465;LDAF=0.3148;AVGPOST=0.7800;RSQ=0.4596;ERATE=0.0966;THETA=0.0005;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 169024829 . C CTT 1663 PASS INDEL;BAVGPOST=0.885;BRSQ=0.446;LDAF=0.1763;AVGPOST=0.7952;RSQ=0.4322;ERATE=0.0328;THETA=0.0003;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 169024893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.888;LDAF=0.0718;AVGPOST=0.9848;RSQ=0.9208;ERATE=0.0008;THETA=0.0016;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 169024990 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2883;AVGPOST=0.9911;RSQ=0.9844;ERATE=0.0007;THETA=0.0006;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 169024994 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9749;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169025033 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1104;AVGPOST=0.9984;RSQ=0.9934;ERATE=0.0004;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 169025314 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.8048;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169025658 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7331;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169025791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9761;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169025805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8381;AVGPOST=0.9985;RSQ=0.9965;ERATE=0.0006;THETA=0.0003;AC=1832;AN=2184 GT:DS:GL:BD 0.83882785 1
1 169025815 . T TA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169025938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169025965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6672;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169026054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9731;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169026066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0358;AVGPOST=0.9995;RSQ=0.9938;ERATE=0.0002;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 169026104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169026138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0085;AVGPOST=0.9991;RSQ=0.9564;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169026304 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9372;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169026312 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0077;AVGPOST=0.9963;RSQ=0.8287;ERATE=0.0008;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169026405 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.6594;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169026508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6679;ERATE=0.0003;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169026515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8746;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169026546 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.957;LDAF=0.5228;AVGPOST=0.9760;RSQ=0.9707;ERATE=0.0004;THETA=0.0003;AC=1149;AN=2184 GT:DS:GL:BD 0.52609891 1
1 169026547 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.957;LDAF=0.5186;AVGPOST=0.9724;RSQ=0.9664;ERATE=0.0010;THETA=0.0021;AC=1140;AN=2184 GT:DS:GL:BD 0.52197802 1
1 169026740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0002;THETA=0.0061;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169026741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169026930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1897;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 169026996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169027072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169027073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0785;AVGPOST=0.9992;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169027290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169027309 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5247;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169027321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0044;AVGPOST=0.9980;RSQ=0.8506;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169027376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0376;AVGPOST=0.9980;RSQ=0.9784;ERATE=0.0003;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 169027432 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0197;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0002;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169027487 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0722;AVGPOST=0.9993;RSQ=0.9962;ERATE=0.0002;THETA=0.0005;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 169027506 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7728;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169027523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169027675 rs75075111 TTTA T 1593 PASS INDEL;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0077;AVGPOST=0.9983;RSQ=0.9186;ERATE=0.0002;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169027681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9240;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169028036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0002;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169028053 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169028063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6160;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169028090 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6125;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169028096 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0094;AVGPOST=0.9985;RSQ=0.9380;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169028210 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169028217 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169028264 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0787;AVGPOST=0.9989;RSQ=0.9948;ERATE=0.0004;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169028282 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169028348 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3588;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0005;THETA=0.0002;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 169028438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2842;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 169028452 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0096;AVGPOST=0.9991;RSQ=0.9618;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169028530 . T TN 13 PASS INDEL;BAVGPOST=0.985;BRSQ=0.289;LDAF=0.0130;AVGPOST=0.9843;RSQ=0.5539;ERATE=0.0006;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169028581 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0101;AVGPOST=0.9973;RSQ=0.9066;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169028703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6774;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169028715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.479;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4510;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169028716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8392;AVGPOST=0.9981;RSQ=0.9952;ERATE=0.0005;THETA=0.0003;AC=1833;AN=2184 GT:DS:GL:BD 0.83928573 1
1 169028736 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0247;AVGPOST=0.9939;RSQ=0.9056;ERATE=0.0004;THETA=0.0001;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 169029082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8321;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169029173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6667;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169029187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169029189 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169029213 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0782;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0002;THETA=0.0005;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169029354 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2908;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 169029416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.642;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.5623;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169029447 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5653;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169029449 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9558;ERATE=0.0004;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169029520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.2997;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169029527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5468;AVGPOST=0.9949;RSQ=0.9933;ERATE=0.0010;THETA=0.0003;AC=1194;AN=2184 GT:DS:GL:BD 0.54670328 1
1 169029531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8400;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0007;AC=1835;AN=2184 GT:DS:GL:BD 0.84020144 1
1 169029549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169029639 . AG A 17 PASS INDEL;BAVGPOST=0.991;BRSQ=0.572;LDAF=0.0135;AVGPOST=0.9851;RSQ=0.5792;ERATE=0.0015;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169029640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0960;AVGPOST=0.9992;RSQ=0.9961;ERATE=0.0003;THETA=0.0002;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 169029662 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6384;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169029691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6860;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169029699 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169029711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169029736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0110;AVGPOST=0.9988;RSQ=0.9579;ERATE=0.0002;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169029775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169029871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0640;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0002;THETA=0.0011;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 169029904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1117;AVGPOST=0.9987;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 169029911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169029924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169029947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8662;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169029998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169030001 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0205;AVGPOST=0.9996;RSQ=0.9926;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 169030221 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0109;AVGPOST=0.9982;RSQ=0.9359;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169030286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8582;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169030293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7258;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169030308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7662;ERATE=0.0008;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169030371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0059;AVGPOST=0.9968;RSQ=0.7957;ERATE=0.0018;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169030372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0041;AVGPOST=0.9974;RSQ=0.7831;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169030384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169030431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0963;AVGPOST=0.9991;RSQ=0.9965;ERATE=0.0002;THETA=0.0003;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 169030491 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9799;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169030512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3540;AVGPOST=0.9965;RSQ=0.9948;ERATE=0.0008;THETA=0.0004;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 169030513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169030682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169030716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9263;ERATE=0.0007;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169030762 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169030784 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7952;ERATE=0.0013;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169030820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.9122;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169030868 . AG A 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169030878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.5500;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=1200;AN=2184 GT:DS:GL:BD 0.54945058 1
1 169030904 . T TC 136 PASS INDEL;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7478;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169030928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169030931 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3596;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 169030941 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8437;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169031014 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0202;AVGPOST=0.9987;RSQ=0.9814;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169031036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0062;AVGPOST=0.9970;RSQ=0.8106;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169031067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0236;AVGPOST=0.9979;RSQ=0.9672;ERATE=0.0003;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 169031070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7967;ERATE=0.0011;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169031475 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0121;AVGPOST=0.9985;RSQ=0.9589;ERATE=0.0002;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169031634 . TA T 47 PASS INDEL;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0092;AVGPOST=0.9911;RSQ=0.6120;ERATE=0.0015;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169031755 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0121;AVGPOST=0.9992;RSQ=0.9744;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169031843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0066;AVGPOST=0.9990;RSQ=0.9512;ERATE=0.0003;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169031882 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.5015;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169031943 rs66947419 GA G 275 PASS INDEL;BAVGPOST=0.963;BRSQ=0.813;LDAF=0.1021;AVGPOST=0.9874;RSQ=0.9505;ERATE=0.0007;THETA=0.0002;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 169031971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1007;AVGPOST=0.9953;RSQ=0.9820;ERATE=0.0005;THETA=0.0002;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 169032153 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.877;LDAF=0.0096;AVGPOST=0.9973;RSQ=0.8779;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169032278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169032319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0157;AVGPOST=0.9996;RSQ=0.9879;ERATE=0.0003;THETA=0.0001;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169032397 . AT A 721 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9975;RSQ=0.8829;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169032476 . TAGAC T 375 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7511;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169032500 . AAGG A 1187 PASS INDEL;BAVGPOST=0.997;BRSQ=0.919;LDAF=0.0128;AVGPOST=0.9987;RSQ=0.9611;ERATE=0.0005;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169032504 . A AC 205 PASS INDEL;BAVGPOST=0.997;BRSQ=0.834;LDAF=0.0112;AVGPOST=0.9976;RSQ=0.9161;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169032644 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9960;RSQ=0.5907;ERATE=0.0009;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169032825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8388;AVGPOST=0.9979;RSQ=0.9949;ERATE=0.0005;THETA=0.0003;AC=1834;AN=2184 GT:DS:GL:BD 0.83974361 1
1 169032877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9765;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169032894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0074;AVGPOST=0.9981;RSQ=0.9161;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169032934 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6910;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169033081 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5771;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169033161 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169033245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7219;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169033317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1115;AVGPOST=0.9985;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 169033336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7139;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169033406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0197;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169033477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5554;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169033499 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0718;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 169033508 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0785;AVGPOST=0.9990;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169033589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.1581;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169033688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8213;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169033719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169033720 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9012;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169033760 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8395;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0002;THETA=0.0023;AC=1834;AN=2184 GT:DS:GL:BD 0.83974361 1
1 169033807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8387;AVGPOST=0.9991;RSQ=0.9974;ERATE=0.0005;THETA=0.0002;AC=1832;AN=2184 GT:DS:GL:BD 0.83882785 1
1 169033873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7556;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169034018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0071;AVGPOST=0.9980;RSQ=0.8855;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169034074 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0051;AVGPOST=0.9991;RSQ=0.9237;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169034120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169034185 . T TA 107 PASS INDEL;BAVGPOST=0.999;BRSQ=0.589;LDAF=0.0033;AVGPOST=0.9952;RSQ=0.4263;ERATE=0.0009;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169034202 . TG T 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6689;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169034285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1064;AVGPOST=0.9957;RSQ=0.9845;ERATE=0.0012;THETA=0.0003;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 169034477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9616;ERATE=0.0003;THETA=0.0001;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169034652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0104;AVGPOST=0.9989;RSQ=0.9519;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169034783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8964;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169034840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0136;AVGPOST=0.9985;RSQ=0.9556;ERATE=0.0002;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169034974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0730;AVGPOST=0.9989;RSQ=0.9929;ERATE=0.0003;THETA=0.0002;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 169035027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8817;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169035061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0100;AVGPOST=0.9991;RSQ=0.9649;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169035134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0911;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0038;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 169035237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169035371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0775;AVGPOST=0.9986;RSQ=0.9923;ERATE=0.0003;THETA=0.0005;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 169035485 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1878;AVGPOST=0.9981;RSQ=0.9945;ERATE=0.0004;THETA=0.0004;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 169035614 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7274;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169035664 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169035711 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5824;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169035750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9872;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169035776 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9996;RSQ=0.9795;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169035800 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6356;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169035802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0028;AVGPOST=0.9969;RSQ=0.6099;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169035827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169035893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5033;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169036072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7695;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169036165 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5566;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169036167 . GC G 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4552;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169036205 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8216;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169036222 . C CTA 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8558;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169036323 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169036338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0791;AVGPOST=0.9988;RSQ=0.9935;ERATE=0.0011;THETA=0.0005;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169036363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169036425 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169036429 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9682;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169036452 . CAGAA C 65 PASS INDEL;BAVGPOST=0.998;BRSQ=0.755;LDAF=0.0073;AVGPOST=0.9924;RSQ=0.5892;ERATE=0.0019;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169036481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8475;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169036507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0002;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169036549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0719;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 169036597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6951;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169036607 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0773;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0002;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 169036741 . TA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7140;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169036848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169036887 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0119;AVGPOST=0.9995;RSQ=0.9827;ERATE=0.0002;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169037038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0125;AVGPOST=0.9987;RSQ=0.9539;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169037123 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4192;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169037198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169037224 . A AT 79 PASS INDEL;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0064;AVGPOST=0.9931;RSQ=0.5588;ERATE=0.0008;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169037253 . CTGTT C 179 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0014;AVGPOST=0.9977;RSQ=0.4166;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169037287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0026;AVGPOST=0.9964;RSQ=0.4400;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169037329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8348;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169037411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.7449;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169037477 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6780;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169037483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5624;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169037522 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0063;AVGPOST=0.9982;RSQ=0.9073;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169037537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0068;AVGPOST=0.9971;RSQ=0.8278;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169037614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5916;ERATE=0.0008;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169037660 rs56805751 AAAAC A 71675 PASS INDEL;BAVGPOST=0.991;BRSQ=0.972;LDAF=0.8252;AVGPOST=0.9748;RSQ=0.9390;ERATE=0.0072;THETA=0.0003;AC=1815;AN=2184 GT:DS:GL:BD 0.83104396 1
1 169037705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169037750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6250;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169037784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5121;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169037828 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169037866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8491;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169037924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169038001 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0203;AVGPOST=0.9975;RSQ=0.9512;ERATE=0.0002;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169038103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9615;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169038114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169038190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9173;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169038206 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169038272 . T TC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7655;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169038372 rs35516478 CT C 29804 PASS INDEL;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3657;AVGPOST=0.9948;RSQ=0.9915;ERATE=0.0006;THETA=0.0003;AC=797;AN=2184 GT:DS:GL:BD 0.36492673 0
1 169038397 . TACA T 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169038489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0195;AVGPOST=0.9989;RSQ=0.9776;ERATE=0.0002;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 169038502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169038531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5809;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169038827 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0197;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0002;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169038856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1831;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 169038930 . AC A 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5400;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169039004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6020;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169039016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0135;AVGPOST=0.9990;RSQ=0.9675;ERATE=0.0002;THETA=0.0010;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169039023 . AG A 244 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6344;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169039174 . C CA 320 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7543;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169039181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8164;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169039201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8924;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169039281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1062;AVGPOST=0.9987;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 169039328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169039344 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8776;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169039507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0786;AVGPOST=0.9977;RSQ=0.9891;ERATE=0.0004;THETA=0.0004;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169039584 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8072;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169039605 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8396;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=1834;AN=2184 GT:DS:GL:BD 0.83974361 1
1 169039613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2813;AVGPOST=0.9976;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 169039767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169039933 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169040007 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7251;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169040156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8638;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169040195 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.5193;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169040204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9994;RSQ=0.9800;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169040220 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1048;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 169040331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1047;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 169040602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4662;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169040669 . TCTTTA T 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.7941;ERATE=0.0010;THETA=0.0049;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169040914 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.949;LDAF=0.0931;AVGPOST=0.9952;RSQ=0.9779;ERATE=0.0011;THETA=0.0002;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 169040924 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0034;AVGPOST=0.9968;RSQ=0.6152;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169040956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169041002 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7589;AVGPOST=0.9966;RSQ=0.9933;ERATE=0.0006;THETA=0.0002;AC=1659;AN=2184 GT:DS:GL:BD 0.75961536 1
1 169041046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9331;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169041062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0361;AVGPOST=0.9974;RSQ=0.9705;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 169041144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3628;AVGPOST=0.9962;RSQ=0.9940;ERATE=0.0005;THETA=0.0003;AC=792;AN=2184 GT:DS:GL:BD 0.36263737 0
1 169041169 . GGT G 1481 PASS INDEL;BAVGPOST=0.871;BRSQ=0.633;LDAF=0.1923;AVGPOST=0.8478;RSQ=0.6531;ERATE=0.0122;THETA=0.0002;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 169041171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.979;LDAF=0.8328;AVGPOST=0.9917;RSQ=0.9799;ERATE=0.0008;THETA=0.0004;AC=1821;AN=2184 GT:DS:GL:BD 0.83379120 1
1 169041172 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.960;LDAF=0.2722;AVGPOST=0.9797;RSQ=0.9679;ERATE=0.0006;THETA=0.0003;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 169041227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8119;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169041242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0044;AVGPOST=0.9981;RSQ=0.8597;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169041313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169041316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6632;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169041482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4926;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169041487 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169041488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5064;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169041589 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8941;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169041682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1037;AVGPOST=0.9991;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 169041799 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0120;AVGPOST=0.9971;RSQ=0.9061;ERATE=0.0005;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169041803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.530;LDAF=0.0029;AVGPOST=0.9964;RSQ=0.4764;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169041820 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0060;AVGPOST=0.9977;RSQ=0.8372;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169041885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0069;AVGPOST=0.9958;RSQ=0.7648;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169041913 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0115;AVGPOST=0.9979;RSQ=0.9352;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169042021 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7605;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=1662;AN=2184 GT:DS:GL:BD 0.76098901 1
1 169042078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6831;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169042149 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7791;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169042342 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5159;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169042356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169042376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169042581 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0906;AVGPOST=0.9986;RSQ=0.9943;ERATE=0.0004;THETA=0.0005;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 169042613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0046;AVGPOST=0.9977;RSQ=0.7737;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169042770 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6338;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169042912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.514;LDAF=0.0113;AVGPOST=0.9845;RSQ=0.4847;ERATE=0.0032;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169042927 . CAT C 110 PASS INDEL;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.6032;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169042939 . C CAA 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169042942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169042998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9873;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169043012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0197;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0002;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169043016 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169043061 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6566;AVGPOST=0.9905;RSQ=0.9861;ERATE=0.0014;THETA=0.0002;AC=1432;AN=2184 GT:DS:GL:BD 0.65567768 1
1 169043189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9762;ERATE=0.0002;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169043223 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1022;AVGPOST=0.9991;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 169043308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.7377;ERATE=0.0010;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169043319 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5309;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169043368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1020;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 169043397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0125;AVGPOST=0.9985;RSQ=0.9490;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169043406 . CA C 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3870;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169043419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0198;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0003;THETA=0.0018;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169043440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6700;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169043579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2902;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 169043602 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2898;AVGPOST=0.9968;RSQ=0.9941;ERATE=0.0004;THETA=0.0005;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 169043724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5674;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169043886 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8399;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169043901 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5281;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169043911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7251;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169043932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.558;LDAF=0.0050;AVGPOST=0.9984;RSQ=0.8826;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169044000 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0031;AVGPOST=0.9981;RSQ=0.7894;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169044052 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169044099 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8438;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169044100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7564;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169044136 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.721;LDAF=0.0107;AVGPOST=0.9950;RSQ=0.8108;ERATE=0.0005;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169044276 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.850;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9148;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169044315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.604;LDAF=0.0039;AVGPOST=0.9958;RSQ=0.5670;ERATE=0.0004;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169044455 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.481;LDAF=0.0031;AVGPOST=0.9948;RSQ=0.3362;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169044519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0184;AVGPOST=0.9970;RSQ=0.9413;ERATE=0.0005;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 169044520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0117;AVGPOST=0.9955;RSQ=0.8430;ERATE=0.0005;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169044535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0779;AVGPOST=0.9989;RSQ=0.9933;ERATE=0.0005;THETA=0.0002;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169044593 . C CT 195 PASS INDEL;BAVGPOST=0.950;BRSQ=0.505;LDAF=0.0690;AVGPOST=0.9851;RSQ=0.9058;ERATE=0.0009;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 169044595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.887;LDAF=0.0824;AVGPOST=0.9856;RSQ=0.9247;ERATE=0.0015;THETA=0.0003;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 169044668 . TC T 1014 PASS INDEL;BAVGPOST=0.918;BRSQ=0.397;LDAF=0.1222;AVGPOST=0.8485;RSQ=0.4367;ERATE=0.0233;THETA=0.0003;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 169044702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169044778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0722;AVGPOST=0.9994;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 169044814 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169044829 . AACAAATTCCTG A 198 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.7858;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169045023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0207;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0002;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 169045051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169045076 . AT A 236 PASS INDEL;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169045110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169045137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0734;AVGPOST=0.9989;RSQ=0.9937;ERATE=0.0004;THETA=0.0002;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 169045200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5058;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169045242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9351;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169045292 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8724;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169045360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0086;AVGPOST=0.9955;RSQ=0.7880;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169045386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0785;AVGPOST=0.9977;RSQ=0.9875;ERATE=0.0005;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169045403 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169045438 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0366;AVGPOST=0.9987;RSQ=0.9845;ERATE=0.0004;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 169045459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6263;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169045628 . GA G 262 PASS INDEL;BAVGPOST=0.997;BRSQ=0.746;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9483;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169045637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0799;AVGPOST=0.9963;RSQ=0.9800;ERATE=0.0005;THETA=0.0002;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169045664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6593;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169045695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.5944;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169045704 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4808;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169045710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0110;AVGPOST=0.9989;RSQ=0.9548;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169045770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0102;AVGPOST=0.9975;RSQ=0.9134;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169045817 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0197;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169045843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.7976;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169045852 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3538;AVGPOST=0.9953;RSQ=0.9923;ERATE=0.0009;THETA=0.0003;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 169046013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8483;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169046074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0724;AVGPOST=0.9987;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 169046405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3522;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0008;THETA=0.0004;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 169046562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169046574 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169046702 . TTC T 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6136;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169046767 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169046775 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169046798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0091;AVGPOST=0.9997;RSQ=0.9875;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169046961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7750;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169046981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7159;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169047036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.614;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7139;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169047097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.899;LDAF=0.0128;AVGPOST=0.9978;RSQ=0.9301;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169047139 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169047159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2782;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 169047167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9508;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169047246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5921;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169047321 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169047330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169047332 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169047448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7115;ERATE=0.0008;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169047459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0782;AVGPOST=0.9987;RSQ=0.9935;ERATE=0.0003;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169047462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8394;AVGPOST=0.9963;RSQ=0.9905;ERATE=0.0006;THETA=0.0003;AC=1835;AN=2184 GT:DS:GL:BD 0.84020144 1
1 169047513 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9505;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169047534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9136;ERATE=0.0010;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169047689 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169047843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7897;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169047943 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5417;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169048088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4962;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169048089 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169048090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0100;AVGPOST=0.9993;RSQ=0.9698;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169048170 . A AT 83 PASS INDEL;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0050;AVGPOST=0.9977;RSQ=0.7982;ERATE=0.0005;THETA=0.0036;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169048218 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.2846;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 169048255 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169048264 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169048328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.5332;AVGPOST=0.9869;RSQ=0.9831;ERATE=0.0015;THETA=0.0003;AC=1163;AN=2184 GT:DS:GL:BD 0.53250915 1
1 169048365 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4154;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169048404 . TA T 180 PASS INDEL;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.4010;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169048423 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0107;AVGPOST=0.9988;RSQ=0.9526;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169048568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169048634 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7556;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169048763 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0039;AVGPOST=0.9962;RSQ=0.6739;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169048837 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0912;AVGPOST=0.9975;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 169048848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.5552;AVGPOST=0.9971;RSQ=0.9959;ERATE=0.0007;THETA=0.0002;AC=1212;AN=2184 GT:DS:GL:BD 0.55494505 1
1 169048989 . T TTTGG 134 PASS INDEL;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0024;AVGPOST=0.9961;RSQ=0.3738;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169048993 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169049017 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169049141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7936;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169049175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6648;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169049200 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8377;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169049358 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169049386 . TC T 654 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9513;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169049393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7762;ERATE=0.0002;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169049699 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169049738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1608;AVGPOST=0.9979;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 169049816 . TTC T 66616 PASS INDEL;BAVGPOST=0.995;BRSQ=0.591;LDAF=0.9905;AVGPOST=0.9876;RSQ=0.4881;ERATE=0.0010;THETA=0.0004;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 169049817 rs33954676 TC T 58472 PASS INDEL;BAVGPOST=0.997;BRSQ=0.693;LDAF=0.9957;AVGPOST=0.9955;RSQ=0.5568;ERATE=0.0005;THETA=0.0001;AC=2177;AN=2184 GT:DS:GL:BD 0.99679488 1
1 169049881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.4431;AVGPOST=0.9955;RSQ=0.9938;ERATE=0.0010;THETA=0.0004;AC=969;AN=2184 GT:DS:GL:BD 0.44368133 0
1 169050024 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.742;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8042;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169050110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5530;AVGPOST=0.9888;RSQ=0.9850;ERATE=0.0019;THETA=0.0007;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 169050170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8594;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169050286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0032;AVGPOST=0.9976;RSQ=0.6803;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169050475 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9959;RSQ=0.6311;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169050489 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5315;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169050582 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169050599 . GTTT G 981 PASS INDEL;BAVGPOST=0.996;BRSQ=0.800;LDAF=0.0100;AVGPOST=0.9966;RSQ=0.8802;ERATE=0.0002;THETA=0.0050;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169050910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169051060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0150;AVGPOST=0.9991;RSQ=0.9742;ERATE=0.0002;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169051061 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8899;ERATE=0.0002;THETA=0.0050;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169051073 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2396;AVGPOST=0.9955;RSQ=0.9911;ERATE=0.0006;THETA=0.0019;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 169051093 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0185;AVGPOST=0.9994;RSQ=0.9846;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 169051105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0120;AVGPOST=0.9973;RSQ=0.9273;ERATE=0.0004;THETA=0.0019;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169051110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169051145 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5354;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169051181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.2900;AVGPOST=0.9919;RSQ=0.9870;ERATE=0.0016;THETA=0.0056;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 169051296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5697;AVGPOST=0.9926;RSQ=0.9896;ERATE=0.0012;THETA=0.0006;AC=1244;AN=2184 GT:DS:GL:BD 0.56959707 1
1 169051307 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5070;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169051408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169051480 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0060;AVGPOST=0.9985;RSQ=0.8944;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169051495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8467;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169051551 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7164;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169051680 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169051691 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2442;AVGPOST=0.9970;RSQ=0.9935;ERATE=0.0006;THETA=0.0013;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 169051697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0059;AVGPOST=0.9997;RSQ=0.9752;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169051724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0002;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169051769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169051774 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9834;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169051781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7598;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169051894 . G GA 94 PASS INDEL;BAVGPOST=0.982;BRSQ=0.529;LDAF=0.0270;AVGPOST=0.9669;RSQ=0.5032;ERATE=0.0091;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169051956 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0705;AVGPOST=0.9991;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 169052014 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7187;ERATE=0.0002;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169052073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5882;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169052165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169052196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.8249;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169052234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4366;AVGPOST=0.9981;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 169052323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1850;AVGPOST=0.9980;RSQ=0.9951;ERATE=0.0006;THETA=0.0001;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 169052609 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169052786 . A AT 6494 PASS INDEL;BAVGPOST=0.989;BRSQ=0.939;LDAF=0.0820;AVGPOST=0.9978;RSQ=0.9879;ERATE=0.0004;THETA=0.0002;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 169052917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8402;AVGPOST=0.9980;RSQ=0.9945;ERATE=0.0004;THETA=0.0002;AC=1837;AN=2184 GT:DS:GL:BD 0.84111720 1
1 169052956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3540;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0006;THETA=0.0004;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 169053112 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8096;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169053115 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169053133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7345;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169053215 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9548;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169053316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7513;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169053334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0255;AVGPOST=0.9983;RSQ=0.9763;ERATE=0.0002;THETA=0.0001;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 169053374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169053388 . CTT C 20629 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1337;AVGPOST=0.9991;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 169053420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9990;RSQ=0.9706;ERATE=0.0002;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169053459 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8181;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169053554 . ACGAG A 597 PASS INDEL;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0116;AVGPOST=0.9972;RSQ=0.9220;ERATE=0.0004;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169053555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0115;AVGPOST=0.9995;RSQ=0.9842;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169053559 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0109;AVGPOST=0.9982;RSQ=0.9411;ERATE=0.0007;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169053560 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7900;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=1726;AN=2184 GT:DS:GL:BD 0.79029304 1
1 169053625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3537;AVGPOST=0.9973;RSQ=0.9962;ERATE=0.0003;THETA=0.0014;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 169053626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0764;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 169053718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169053868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0248;AVGPOST=0.9962;RSQ=0.9432;ERATE=0.0004;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 169053925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7910;AVGPOST=0.9981;RSQ=0.9960;ERATE=0.0005;THETA=0.0003;AC=1727;AN=2184 GT:DS:GL:BD 0.79075092 1
1 169053970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.3551;AVGPOST=0.9968;RSQ=0.9954;ERATE=0.0005;THETA=0.0004;AC=775;AN=2184 GT:DS:GL:BD 0.35485348 0
1 169054055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9548;ERATE=0.0002;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169054290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.3679;AVGPOST=0.9938;RSQ=0.9901;ERATE=0.0011;THETA=0.0004;AC=804;AN=2184 GT:DS:GL:BD 0.36813188 0
1 169054331 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.8932;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169054496 rs10693354 T TTAAAA 118616 PASS INDEL;BAVGPOST=0.979;BRSQ=0.960;LDAF=0.7619;AVGPOST=0.9605;RSQ=0.9249;ERATE=0.0076;THETA=0.0005;AC=1685;AN=2184 GT:DS:GL:BD 0.77152014 1
1 169054557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1102;AVGPOST=0.9978;RSQ=0.9916;ERATE=0.0003;THETA=0.0003;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 169054616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169054797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8982;ERATE=0.0002;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169055014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169055117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0828;AVGPOST=0.9982;RSQ=0.9907;ERATE=0.0003;THETA=0.0030;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 169055218 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0123;AVGPOST=0.9993;RSQ=0.9730;ERATE=0.0002;THETA=0.0033;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169055326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169055429 . C CT 35 PASS INDEL;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6666;ERATE=0.0004;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169055548 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169055871 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0062;AVGPOST=0.9991;RSQ=0.9398;ERATE=0.0002;THETA=0.0031;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169055910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9185;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169055991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169056077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.6850;AVGPOST=0.9979;RSQ=0.9970;ERATE=0.0006;THETA=0.0004;AC=1496;AN=2184 GT:DS:GL:BD 0.68498170 1
1 169056105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8778;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169056291 . TTC T 9313 PASS INDEL;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1100;AVGPOST=0.9979;RSQ=0.9909;ERATE=0.0004;THETA=0.0004;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 169056303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9179;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169056342 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9384;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169056398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8409;AVGPOST=0.9955;RSQ=0.9887;ERATE=0.0009;THETA=0.0041;AC=1839;AN=2184 GT:DS:GL:BD 0.84203297 1
1 169056437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0002;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169056444 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7339;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169056591 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169056618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0072;AVGPOST=0.9992;RSQ=0.9519;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169056945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.969;LDAF=0.1452;AVGPOST=0.9977;RSQ=0.9927;ERATE=0.0002;THETA=0.0004;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 169056946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.8332;AVGPOST=0.9978;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=1822;AN=2184 GT:DS:GL:BD 0.83424908 1
1 169057033 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5716;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169057089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0462;AVGPOST=0.9980;RSQ=0.9848;ERATE=0.0002;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 169057114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0147;AVGPOST=0.9993;RSQ=0.9791;ERATE=0.0002;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169057117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169057121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8365;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169057214 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9706;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169057277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0109;AVGPOST=0.9992;RSQ=0.9638;ERATE=0.0003;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169057297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0108;AVGPOST=0.9995;RSQ=0.9811;ERATE=0.0002;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169057321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0075;AVGPOST=0.9993;RSQ=0.9600;ERATE=0.0002;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169057373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.994;LDAF=0.4768;AVGPOST=0.9947;RSQ=0.9929;ERATE=0.0004;THETA=0.0005;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 169057595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0108;AVGPOST=0.9990;RSQ=0.9582;ERATE=0.0003;THETA=0.0024;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169057710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8567;ERATE=0.0008;THETA=0.0031;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169057714 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169057777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169057827 . G GC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6733;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169057836 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0884;AVGPOST=0.9965;RSQ=0.9816;ERATE=0.0003;THETA=0.0006;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 169057886 . TG T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5381;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169057947 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9749;ERATE=0.0002;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169057969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.7389;AVGPOST=0.9945;RSQ=0.9912;ERATE=0.0004;THETA=0.0052;AC=1615;AN=2184 GT:DS:GL:BD 0.73946887 1
1 169057984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9028;ERATE=0.0004;THETA=0.0065;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169058109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0087;AVGPOST=0.9976;RSQ=0.8861;ERATE=0.0007;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169058109 . CT C 153 PASS INDEL;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0004;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169058165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169058179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9925;ERATE=0.0002;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169058347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6443;ERATE=0.0003;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169058376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169058377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.2726;ERATE=0.0002;THETA=0.0028;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169058418 . A AC 1693 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0108;AVGPOST=0.9995;RSQ=0.9774;ERATE=0.0004;THETA=0.0015;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169058454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8483;ERATE=0.0004;THETA=0.0033;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169058560 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7839;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169058726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.976;LDAF=0.0884;AVGPOST=0.9883;RSQ=0.9442;ERATE=0.0004;THETA=0.0149;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 169058845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.868;LDAF=0.0113;AVGPOST=0.9949;RSQ=0.8094;ERATE=0.0009;THETA=0.0018;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169059106 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.904;BRSQ=0.798;LDAF=0.6997;AVGPOST=0.8687;RSQ=0.7650;ERATE=0.0255;THETA=0.0012;AC=1580;AN=2184 GT:DS:GL:BD 0.72344321 1
1 169059107 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.407;LDAF=0.0442;AVGPOST=0.9378;RSQ=0.4342;ERATE=0.0072;THETA=0.0061;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169059114 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0059;AVGPOST=0.9967;RSQ=0.7494;ERATE=0.0007;THETA=0.0039;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169059116 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.425;LDAF=0.0353;AVGPOST=0.9517;RSQ=0.4589;ERATE=0.0026;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 169059116 . TG T 383 PASS INDEL;BAVGPOST=0.877;BRSQ=0.360;LDAF=0.1524;AVGPOST=0.8131;RSQ=0.4020;ERATE=0.0325;THETA=0.0050;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 169059389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6176;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169059472 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7393;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169059498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169059562 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169059586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7333;ERATE=0.0010;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169059625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4732;ERATE=0.0004;THETA=0.0067;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169059720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9081;ERATE=0.0003;THETA=0.0021;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169059836 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8844;ERATE=0.0002;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169059879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169059918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0028;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169059933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8785;ERATE=0.0014;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169059995 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169059998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7597;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169060005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8767;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169060179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0047;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169060248 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169060251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8739;ERATE=0.0002;THETA=0.0034;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169060265 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9991;RSQ=0.9734;ERATE=0.0002;THETA=0.0037;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169060388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9321;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169060389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8618;ERATE=0.0005;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169060461 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9223;ERATE=0.0003;THETA=0.0048;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169060489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8345;AVGPOST=0.9947;RSQ=0.9875;ERATE=0.0003;THETA=0.0130;AC=1822;AN=2184 GT:DS:GL:BD 0.83424908 1
1 169060508 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169060548 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9429;ERATE=0.0002;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169060587 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169060725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0003;THETA=0.0106;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169060838 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6494;ERATE=0.0003;THETA=0.0139;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169060850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0003;THETA=0.0082;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169060926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169060946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9880;ERATE=0.0002;THETA=0.0096;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169060975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0109;AVGPOST=0.9982;RSQ=0.9299;ERATE=0.0027;THETA=0.0123;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169061229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.1880;ERATE=0.0003;THETA=0.0046;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169061252 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169061389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169061409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0081;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169061427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.935;LDAF=0.0377;AVGPOST=0.9916;RSQ=0.9278;ERATE=0.0034;THETA=0.0014;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 169061447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9581;ERATE=0.0002;THETA=0.0128;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169061454 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9460;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169061558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8479;AVGPOST=0.9968;RSQ=0.9928;ERATE=0.0003;THETA=0.0038;AC=1854;AN=2184 GT:DS:GL:BD 0.84890109 1
1 169061643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0095;AVGPOST=0.9993;RSQ=0.9751;ERATE=0.0004;THETA=0.0093;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169061700 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169061844 rs11450610 G GT 99894 PASS INDEL;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8461;AVGPOST=0.9977;RSQ=0.9937;ERATE=0.0005;THETA=0.0033;AC=1850;AN=2184 GT:DS:GL:BD 0.84706962 1
1 169061876 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8976;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169061885 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169061942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.1463;AVGPOST=0.9954;RSQ=0.9862;ERATE=0.0004;THETA=0.0051;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 169062093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169062100 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169062310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169062332 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169062389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0786;AVGPOST=0.9973;RSQ=0.9870;ERATE=0.0003;THETA=0.0004;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169062440 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169062458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169062604 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8740;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169062626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5516;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169062639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6372;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169062689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6051;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169062726 . CCCT C 1121 PASS INDEL;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0445;AVGPOST=0.9973;RSQ=0.9738;ERATE=0.0003;THETA=0.0008;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 169062727 rs71673199 CCTT C 6086 PASS INDEL;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0444;AVGPOST=0.9975;RSQ=0.9772;ERATE=0.0003;THETA=0.0007;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 169062728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9641;ERATE=0.0003;THETA=0.0050;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169062850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9421;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169062939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7255;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169063007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.5157;AVGPOST=0.9968;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=1127;AN=2184 GT:DS:GL:BD 0.51602566 1
1 169063028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169063081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6734;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169063097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.1646;AVGPOST=0.9979;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 169063144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169063152 . CAGAA C 128 PASS INDEL;BAVGPOST=0.998;BRSQ=0.776;LDAF=0.0085;AVGPOST=0.9927;RSQ=0.6415;ERATE=0.0025;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169063192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7428;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169063302 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169063333 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6543;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0004;THETA=0.0009;AC=1430;AN=2184 GT:DS:GL:BD 0.65476191 1
1 169063482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169063486 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4691;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169063665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169063886 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169063894 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169063969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169063989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169064018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169064062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9091;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169064117 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8059;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169064184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0002;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169064192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169064232 . A AT 138 PASS INDEL;BAVGPOST=0.996;BRSQ=0.612;LDAF=0.0064;AVGPOST=0.9934;RSQ=0.6024;ERATE=0.0014;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169064422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9226;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169064516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0499;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0002;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 169064534 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169064575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169064580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8575;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169064604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9993;RSQ=0.3496;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169064625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169064630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2232;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 169064682 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.853;LDAF=0.0070;AVGPOST=0.9971;RSQ=0.8280;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169064772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169064831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6083;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169064856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9685;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169064897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169065038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7393;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169065199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9652;ERATE=0.0002;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169065242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169065276 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2177;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 169065321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.816;LDAF=0.0071;AVGPOST=0.9986;RSQ=0.9202;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169065414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8972;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169065554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8028;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169065570 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169065623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0108;AVGPOST=0.9995;RSQ=0.9813;ERATE=0.0002;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169065729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.0855;AVGPOST=0.9970;RSQ=0.9882;ERATE=0.0003;THETA=0.0006;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 169065769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169065819 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7610;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169065851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9994;RSQ=0.9509;ERATE=0.0003;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169065922 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9782;ERATE=0.0002;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169065955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.529;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6404;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169065960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.8976;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169065977 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0398;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0002;THETA=0.0001;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 169066053 . AC A 1397 PASS INDEL;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0085;AVGPOST=0.9988;RSQ=0.9404;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169066104 . A AG 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5418;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169066263 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7620;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169066313 . GC G 15823 PASS INDEL;BAVGPOST=0.961;BRSQ=0.938;LDAF=0.4454;AVGPOST=0.9675;RSQ=0.9573;ERATE=0.0015;THETA=0.0004;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 169066316 rs79814088 CT C 42956 PASS INDEL;BAVGPOST=0.983;BRSQ=0.975;LDAF=0.4632;AVGPOST=0.9884;RSQ=0.9844;ERATE=0.0008;THETA=0.0003;AC=1013;AN=2184 GT:DS:GL:BD 0.46382785 0
1 169066351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2198;AVGPOST=0.9963;RSQ=0.9920;ERATE=0.0003;THETA=0.0005;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 169066627 rs11484361 T TC 85656 PASS INDEL;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.8465;AVGPOST=0.9951;RSQ=0.9868;ERATE=0.0009;THETA=0.0004;AC=1849;AN=2184 GT:DS:GL:BD 0.84661174 1
1 169066686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169066729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9985;RSQ=0.9454;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169066848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169066849 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9462;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169066850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8907;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169066948 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.822;LDAF=0.0165;AVGPOST=0.9859;RSQ=0.6781;ERATE=0.0023;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169066956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.820;LDAF=0.0194;AVGPOST=0.9833;RSQ=0.6728;ERATE=0.0042;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169066963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.1489;AVGPOST=0.9948;RSQ=0.9853;ERATE=0.0006;THETA=0.0004;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 169066965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9444;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169067044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.858;LDAF=0.0106;AVGPOST=0.9978;RSQ=0.9198;ERATE=0.0004;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169067198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0096;AVGPOST=0.9980;RSQ=0.9171;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169067288 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1570;AVGPOST=0.9948;RSQ=0.9854;ERATE=0.0007;THETA=0.0006;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 169067348 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7666;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169067380 . T TA 39 PASS INDEL;BAVGPOST=0.987;BRSQ=0.539;LDAF=0.0282;AVGPOST=0.9680;RSQ=0.5465;ERATE=0.0044;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 169067429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0335;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0007;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 169067641 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169067680 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169067701 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9315;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169067712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.7993;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169067740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4739;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0035;AC=1036;AN=2184 GT:DS:GL:BD 0.47435898 0
1 169067843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4736;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0007;AC=1035;AN=2184 GT:DS:GL:BD 0.47390109 0
1 169067861 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7529;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169067884 . GAA G 114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4189;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169067914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9696;ERATE=0.0002;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169067943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6018;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169068129 rs58512054 C CTT 17391 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0867;AVGPOST=0.9965;RSQ=0.9832;ERATE=0.0005;THETA=0.0042;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 169068156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0621;AVGPOST=0.9990;RSQ=0.9927;ERATE=0.0005;THETA=0.0004;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 169068177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169068353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0867;AVGPOST=0.9994;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 169068407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9109;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169068437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169068482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169068503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169068537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0053;AVGPOST=0.9978;RSQ=0.8405;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169068570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.8434;AVGPOST=0.9961;RSQ=0.9901;ERATE=0.0009;THETA=0.0003;AC=1844;AN=2184 GT:DS:GL:BD 0.84432232 1
1 169068627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4740;AVGPOST=0.9970;RSQ=0.9955;ERATE=0.0008;THETA=0.0003;AC=1036;AN=2184 GT:DS:GL:BD 0.47435898 0
1 169068906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7624;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169069128 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169069340 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7427;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169069343 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169069349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8339;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169069776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169070001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6928;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169070009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169070134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9677;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169070203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169070213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.6146;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=1343;AN=2184 GT:DS:GL:BD 0.61492676 1
1 169070246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169070247 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169070332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6157;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0004;AC=1345;AN=2184 GT:DS:GL:BD 0.61584246 1
1 169070355 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169070356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169070365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.752;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.9137;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169070398 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169070445 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5268;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169070450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1419;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 169070513 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7920;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169070523 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6356;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0004;THETA=0.0003;AC=1389;AN=2184 GT:DS:GL:BD 0.63598901 1
1 169070562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169070577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8839;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169070596 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9697;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169070706 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169070736 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.6138;AVGPOST=0.9959;RSQ=0.9943;ERATE=0.0022;THETA=0.0003;AC=1340;AN=2184 GT:DS:GL:BD 0.61355311 1
1 169070742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0205;AVGPOST=0.9997;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 169070749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8309;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169070759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169070864 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0217;AVGPOST=0.9996;RSQ=0.9916;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169070879 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169070896 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.828;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9594;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169070897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7763;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169070927 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.876;LDAF=0.0107;AVGPOST=0.9981;RSQ=0.9299;ERATE=0.0004;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169071004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169071013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9403;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169071035 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169071063 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169071121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0201;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0002;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 169071184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169071194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169071294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4736;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0005;THETA=0.0004;AC=1036;AN=2184 GT:DS:GL:BD 0.47435898 0
1 169071362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0334;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 169071384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9989;RSQ=0.9847;ERATE=0.0002;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169071447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1711;AVGPOST=0.9975;RSQ=0.9936;ERATE=0.0005;THETA=0.0002;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 169071450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6298;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169071480 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169071485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0219;AVGPOST=0.9992;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169071521 . CT C 677 PASS INDEL;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0228;AVGPOST=0.9978;RSQ=0.9586;ERATE=0.0006;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 169071523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0110;AVGPOST=0.9981;RSQ=0.9365;ERATE=0.0002;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169071533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169071582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169071626 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0002;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169071636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9940;ERATE=0.0003;THETA=0.0009;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169071660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0660;AVGPOST=0.9990;RSQ=0.9947;ERATE=0.0002;THETA=0.0004;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 169071697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9925;ERATE=0.0002;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169071795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8901;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169071816 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0002;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169071820 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0220;AVGPOST=0.9991;RSQ=0.9878;ERATE=0.0002;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 169071837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0205;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0009;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 169071999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8726;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169072082 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169072098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5398;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169072135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.903;LDAF=0.0122;AVGPOST=0.9971;RSQ=0.9093;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169072236 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0217;AVGPOST=0.9996;RSQ=0.9912;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169072303 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7126;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169072317 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8286;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169072329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0289;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0002;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 169072568 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169072627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0002;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169072639 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169072731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6416;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0010;THETA=0.0003;AC=1403;AN=2184 GT:DS:GL:BD 0.64239925 1
1 169072807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169072826 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169072936 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8452;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=1846;AN=2184 GT:DS:GL:BD 0.84523809 1
1 169072945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169072991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169072992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1199;AVGPOST=0.9962;RSQ=0.9866;ERATE=0.0011;THETA=0.0001;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 169073002 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1709;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 169073022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0013;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169073026 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169073050 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4726;AVGPOST=0.9981;RSQ=0.9975;ERATE=0.0007;THETA=0.0002;AC=1033;AN=2184 GT:DS:GL:BD 0.47298536 0
1 169073077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7059;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169073241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4711;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0005;AC=1030;AN=2184 GT:DS:GL:BD 0.47161171 0
1 169073299 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169073346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1708;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0002;THETA=0.0002;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 169073357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1165;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0002;THETA=0.0002;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 169073384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1073;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0002;THETA=0.0003;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 169073388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1706;AVGPOST=0.9973;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 169073504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8456;AVGPOST=0.9991;RSQ=0.9974;ERATE=0.0004;THETA=0.0006;AC=1847;AN=2184 GT:DS:GL:BD 0.84569597 1
1 169073518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0202;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0002;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 169073527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169073570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8873;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169073581 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0616;AVGPOST=0.9994;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 169073618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169073833 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8270;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169073841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169073842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6437;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169073885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169073948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4713;AVGPOST=0.9975;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=1030;AN=2184 GT:DS:GL:BD 0.47161171 0
1 169073974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0307;AVGPOST=0.9983;RSQ=0.9817;ERATE=0.0002;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 169074069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169074205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9131;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169074268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1365;AVGPOST=0.9979;RSQ=0.9931;ERATE=0.0004;THETA=0.0004;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 169074296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7386;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169074321 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169074410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169074487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169074531 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0067;AVGPOST=0.9984;RSQ=0.8945;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169074543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9495;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169074640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5839;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169074684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169074736 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1184;AVGPOST=0.9981;RSQ=0.9930;ERATE=0.0004;THETA=0.0004;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 169074854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0126;AVGPOST=0.9995;RSQ=0.9802;ERATE=0.0002;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169075040 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.966;LDAF=0.0878;AVGPOST=0.9902;RSQ=0.9510;ERATE=0.0012;THETA=0.0011;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 169075148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.975;LDAF=0.1205;AVGPOST=0.9904;RSQ=0.9632;ERATE=0.0010;THETA=0.0003;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 169075222 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.339;LDAF=0.0117;AVGPOST=0.9853;RSQ=0.4640;ERATE=0.0017;THETA=0.0038;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169075313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.559;LDAF=0.0302;AVGPOST=0.9639;RSQ=0.5232;ERATE=0.0017;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169075348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.859;LDAF=0.1387;AVGPOST=0.9633;RSQ=0.8752;ERATE=0.0024;THETA=0.0005;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 169075368 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.288;LDAF=0.0469;AVGPOST=0.9579;RSQ=0.6369;ERATE=0.0028;THETA=0.0028;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 169075449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.825;LDAF=0.1368;AVGPOST=0.9509;RSQ=0.8309;ERATE=0.0035;THETA=0.0005;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 169075589 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.309;LDAF=0.0119;AVGPOST=0.9885;RSQ=0.5937;ERATE=0.0008;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169075785 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.482;LDAF=0.0334;AVGPOST=0.9595;RSQ=0.5015;ERATE=0.0027;THETA=0.0011;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 169075857 . C CCCG 523 PASS INDEL;BAVGPOST=0.447;BRSQ=0.061;LDAF=0.7227;AVGPOST=0.7115;RSQ=0.4157;ERATE=0.0144;THETA=0.0001;AC=1695;AN=2184 GT:DS:GL:BD 0.77609891 1
1 169076136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169076200 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0410;AVGPOST=0.9991;RSQ=0.9924;ERATE=0.0002;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 169076210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169076212 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1535;AVGPOST=0.9963;RSQ=0.9904;ERATE=0.0004;THETA=0.0004;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 169076419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0453;AVGPOST=0.9978;RSQ=0.9843;ERATE=0.0003;THETA=0.0010;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 169076430 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.841;LDAF=0.0069;AVGPOST=0.9962;RSQ=0.7617;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169076435 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0079;AVGPOST=0.9984;RSQ=0.9337;ERATE=0.0002;THETA=0.0014;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169076538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5623;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169076627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169076677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169076779 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169076952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169076968 . CT C 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5651;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169077127 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1213;AVGPOST=0.9967;RSQ=0.9891;ERATE=0.0004;THETA=0.0029;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 169077133 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9771;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169077214 . C CG 163 PASS INDEL;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5217;ERATE=0.0004;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169077237 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169077419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0402;AVGPOST=0.9994;RSQ=0.9938;ERATE=0.0003;THETA=0.0007;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 169077464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8383;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169077501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0229;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0002;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 169077698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0223;AVGPOST=0.9993;RSQ=0.9860;ERATE=0.0003;THETA=0.0011;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 169077820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169077833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9805;ERATE=0.0003;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169077946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0002;THETA=0.0017;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169077968 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169077998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169078002 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0403;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 169078076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0096;AVGPOST=0.9994;RSQ=0.9722;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169078084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169078160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8833;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169078247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0080;AVGPOST=0.9981;RSQ=0.9078;ERATE=0.0003;THETA=0.0056;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169078286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169078314 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9179;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169078345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7604;ERATE=0.0002;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169078436 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0453;AVGPOST=0.9993;RSQ=0.9938;ERATE=0.0002;THETA=0.0070;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 169078472 . ATT A 66 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169078517 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0003;THETA=0.0082;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169078572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.965;LDAF=0.2280;AVGPOST=0.9838;RSQ=0.9662;ERATE=0.0018;THETA=0.0124;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 169078609 . C CT 24 PASS INDEL;BAVGPOST=0.994;BRSQ=0.473;LDAF=0.0106;AVGPOST=0.9887;RSQ=0.5778;ERATE=0.0017;THETA=0.0133;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169078691 . ACT A 4206 PASS INDEL;BAVGPOST=0.990;BRSQ=0.912;LDAF=0.0441;AVGPOST=0.9920;RSQ=0.9351;ERATE=0.0005;THETA=0.0036;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 169078694 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7768;ERATE=0.0004;THETA=0.0069;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169078697 rs3835440 TCC T 226 PASS INDEL;BAVGPOST=0.989;BRSQ=0.896;LDAF=0.0737;AVGPOST=0.9421;RSQ=0.6519;ERATE=0.0013;THETA=0.0080;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 169078712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5834;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169078740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0071;AVGPOST=0.9996;RSQ=0.9790;ERATE=0.0002;THETA=0.0129;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169078859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.961;LDAF=0.2373;AVGPOST=0.9851;RSQ=0.9714;ERATE=0.0042;THETA=0.0189;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 169078990 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.934;LDAF=0.8908;AVGPOST=0.9841;RSQ=0.9465;ERATE=0.0041;THETA=0.0097;AC=1951;AN=2184 GT:DS:GL:BD 0.89331502 1
1 169079004 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.915;LDAF=0.1635;AVGPOST=0.9699;RSQ=0.9297;ERATE=0.0068;THETA=0.0162;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 169079019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0217;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169079020 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.911;LDAF=0.2969;AVGPOST=0.9524;RSQ=0.9121;ERATE=0.0188;THETA=0.0233;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 169079025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8115;ERATE=0.0004;THETA=0.0080;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169079060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.901;LDAF=0.0185;AVGPOST=0.9946;RSQ=0.8849;ERATE=0.0037;THETA=0.0104;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 169079146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0200;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169079268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.967;LDAF=0.7042;AVGPOST=0.9828;RSQ=0.9714;ERATE=0.0028;THETA=0.0209;AC=1538;AN=2184 GT:DS:GL:BD 0.70421243 1
1 169079340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0106;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169079419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.957;LDAF=0.6114;AVGPOST=0.9785;RSQ=0.9704;ERATE=0.0022;THETA=0.0034;AC=1332;AN=2184 GT:DS:GL:BD 0.60989010 1
1 169079442 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0162;AVGPOST=0.9985;RSQ=0.9624;ERATE=0.0003;THETA=0.0141;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169079490 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.925;LDAF=0.0217;AVGPOST=0.9968;RSQ=0.9488;ERATE=0.0006;THETA=0.0022;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 169079501 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0003;THETA=0.0176;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169079641 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0072;AVGPOST=0.9988;RSQ=0.9250;ERATE=0.0003;THETA=0.0128;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169079664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.7464;AVGPOST=0.9882;RSQ=0.9772;ERATE=0.0006;THETA=0.0020;AC=1632;AN=2184 GT:DS:GL:BD 0.74725276 1
1 169079680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.6716;AVGPOST=0.9892;RSQ=0.9829;ERATE=0.0005;THETA=0.0058;AC=1467;AN=2184 GT:DS:GL:BD 0.67170328 1
1 169079699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8013;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169079929 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.5917;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169079960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6143;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169080055 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8441;ERATE=0.0003;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169080180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7227;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169080208 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0002;THETA=0.0079;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169080361 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0278;AVGPOST=0.9980;RSQ=0.9762;ERATE=0.0003;THETA=0.0016;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 169080412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169080435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7653;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0002;THETA=0.0013;AC=1670;AN=2184 GT:DS:GL:BD 0.76465201 1
1 169080461 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0019;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169080647 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169080648 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0018;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169080673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169080732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9776;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169080837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7538;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0002;THETA=0.0019;AC=1645;AN=2184 GT:DS:GL:BD 0.75320512 1
1 169080849 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9946;ERATE=0.0004;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169080851 rs61555193 GA G 1434 PASS INDEL;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0138;AVGPOST=0.9989;RSQ=0.9687;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169080874 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169080878 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0528;AVGPOST=0.9992;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 169080909 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8866;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169080921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169080935 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169080955 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169081113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0050;AVGPOST=0.9993;RSQ=0.9500;ERATE=0.0002;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169081218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5627;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169081409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9014;AVGPOST=0.9988;RSQ=0.9941;ERATE=0.0003;THETA=0.0023;AC=1969;AN=2184 GT:DS:GL:BD 0.90155679 1
1 169081480 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0002;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169081791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7672;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169081792 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0191;AVGPOST=0.9966;RSQ=0.9302;ERATE=0.0004;THETA=0.0019;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 169081871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7125;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169081934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169082054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8027;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169082072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169082172 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169082270 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5029;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169082364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.970;LDAF=0.1162;AVGPOST=0.9878;RSQ=0.9554;ERATE=0.0014;THETA=0.0008;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 169082373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.873;LDAF=0.8671;AVGPOST=0.9567;RSQ=0.8649;ERATE=0.0071;THETA=0.0016;AC=1915;AN=2184 GT:DS:GL:BD 0.87683153 1
1 169082439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0118;AVGPOST=0.9991;RSQ=0.9654;ERATE=0.0004;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169082523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.5731;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169082524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.667;LDAF=0.0044;AVGPOST=0.9963;RSQ=0.7160;ERATE=0.0008;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169082669 . A AG 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5784;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169082827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169082847 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169082855 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6647;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169082856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169082894 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169082895 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.2863;AVGPOST=0.9952;RSQ=0.9915;ERATE=0.0005;THETA=0.0005;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 169082982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.910;LDAF=0.0215;AVGPOST=0.9961;RSQ=0.9287;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 169083007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0002;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169083113 . CTG C 132 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6529;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169083171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.7185;ERATE=0.0021;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169083208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1155;AVGPOST=0.9981;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 169083229 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7083;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169083254 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.866;LDAF=0.0191;AVGPOST=0.9922;RSQ=0.8365;ERATE=0.0003;THETA=0.0012;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 169083276 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5651;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169083286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0495;AVGPOST=0.9986;RSQ=0.9895;ERATE=0.0003;THETA=0.0006;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 169083338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1157;AVGPOST=0.9979;RSQ=0.9921;ERATE=0.0004;THETA=0.0006;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 169083399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0247;AVGPOST=0.9956;RSQ=0.9368;ERATE=0.0007;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 169083461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0454;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0002;THETA=0.0006;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 169083482 . CAG C 743 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0093;AVGPOST=0.9985;RSQ=0.9243;ERATE=0.0004;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169083483 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169083514 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0089;AVGPOST=0.9989;RSQ=0.9470;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169083543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169083655 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169083718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169083752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8316;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169083814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0002;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169083916 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9631;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169083918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169084072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9435;ERATE=0.0002;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169084106 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1395;AVGPOST=0.9973;RSQ=0.9927;ERATE=0.0004;THETA=0.0007;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 169084131 . T TA 47 PASS INDEL;BAVGPOST=0.988;BRSQ=0.489;LDAF=0.0244;AVGPOST=0.9661;RSQ=0.4307;ERATE=0.0075;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169084155 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3745;AVGPOST=0.9930;RSQ=0.9902;ERATE=0.0006;THETA=0.0003;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 169084186 . TC T 688 PASS INDEL;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0089;AVGPOST=0.9994;RSQ=0.9675;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169084198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4758;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169084250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0035;AVGPOST=0.9957;RSQ=0.5021;ERATE=0.0015;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169084340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.966;LDAF=0.1197;AVGPOST=0.9862;RSQ=0.9515;ERATE=0.0009;THETA=0.0005;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 169084441 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.934;LDAF=0.0264;AVGPOST=0.9948;RSQ=0.9297;ERATE=0.0005;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 169084447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.892;LDAF=0.1183;AVGPOST=0.9825;RSQ=0.9417;ERATE=0.0016;THETA=0.0007;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 169084461 rs78328556 CAT C 46728 PASS INDEL;BAVGPOST=0.990;BRSQ=0.986;LDAF=0.4678;AVGPOST=0.9881;RSQ=0.9846;ERATE=0.0004;THETA=0.0007;AC=1024;AN=2184 GT:DS:GL:BD 0.46886447 0
1 169084588 . TC T 223 PASS INDEL;BAVGPOST=0.969;BRSQ=0.423;LDAF=0.0498;AVGPOST=0.9359;RSQ=0.4717;ERATE=0.0133;THETA=0.0017;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 169084634 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0055;AVGPOST=0.9994;RSQ=0.9486;ERATE=0.0003;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169084678 . CT C 131 PASS INDEL;BAVGPOST=0.997;BRSQ=0.821;LDAF=0.0112;AVGPOST=0.9964;RSQ=0.8534;ERATE=0.0006;THETA=0.0017;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169084690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.542;LDAF=0.0055;AVGPOST=0.9907;RSQ=0.4427;ERATE=0.0006;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169084830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0039;AVGPOST=0.9959;RSQ=0.6243;ERATE=0.0006;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169084872 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.8922;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169084977 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169085020 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8961;ERATE=0.0003;THETA=0.0022;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169085026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9065;ERATE=0.0002;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169085119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.1261;AVGPOST=0.9933;RSQ=0.9772;ERATE=0.0004;THETA=0.0005;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 169085230 . T TG 960 PASS INDEL;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0180;AVGPOST=0.9977;RSQ=0.9620;ERATE=0.0003;THETA=0.0013;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169085234 . G GA 4643 PASS INDEL;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0180;AVGPOST=0.9979;RSQ=0.9615;ERATE=0.0004;THETA=0.0070;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169085240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169085319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0078;AVGPOST=0.9992;RSQ=0.9628;ERATE=0.0003;THETA=0.0015;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169085329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169085343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169085369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169085380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6863;ERATE=0.0005;THETA=0.0061;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169085408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0002;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169085444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8313;ERATE=0.0012;THETA=0.0048;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169085461 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169085480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0080;AVGPOST=0.9991;RSQ=0.9618;ERATE=0.0002;THETA=0.0013;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169085510 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169085528 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0479;AVGPOST=0.9980;RSQ=0.9868;ERATE=0.0002;THETA=0.0081;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 169085581 . TTC T 1355 PASS INDEL;BAVGPOST=0.978;BRSQ=0.916;LDAF=0.1381;AVGPOST=0.9403;RSQ=0.8133;ERATE=0.0006;THETA=0.0004;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 169085587 rs71693570 CTT C 14644 PASS INDEL;BAVGPOST=0.983;BRSQ=0.946;LDAF=0.1136;AVGPOST=0.9823;RSQ=0.9431;ERATE=0.0005;THETA=0.0010;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 169085590 . TTA T 1656 PASS INDEL;BAVGPOST=0.982;BRSQ=0.932;LDAF=0.1238;AVGPOST=0.9664;RSQ=0.8928;ERATE=0.0006;THETA=0.0058;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 169085646 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0121;AVGPOST=0.9988;RSQ=0.9567;ERATE=0.0002;THETA=0.0058;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169085695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9132;ERATE=0.0002;THETA=0.0176;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169085748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0003;THETA=0.0066;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169086013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.862;LDAF=0.1089;AVGPOST=0.9684;RSQ=0.8817;ERATE=0.0007;THETA=0.0077;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 169086136 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5864;ERATE=0.0004;THETA=0.0184;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169086221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.954;LDAF=0.6371;AVGPOST=0.9682;RSQ=0.9564;ERATE=0.0038;THETA=0.0161;AC=1394;AN=2184 GT:DS:GL:BD 0.63827837 1
1 169086225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9151;ERATE=0.0002;THETA=0.0059;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169086235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0085;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169086258 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.954;LDAF=0.2507;AVGPOST=0.9753;RSQ=0.9547;ERATE=0.0048;THETA=0.0249;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 169086281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8953;ERATE=0.0003;THETA=0.0100;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169086288 . G GA 315 PASS INDEL;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.7117;ERATE=0.0005;THETA=0.0063;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169086324 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8711;ERATE=0.0003;THETA=0.0141;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169086459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0116;AVGPOST=0.9977;RSQ=0.9208;ERATE=0.0004;THETA=0.0246;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169086573 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0241;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169086616 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.913;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9633;ERATE=0.0003;THETA=0.0114;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169086725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0217;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169086764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0002;THETA=0.0385;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169086810 . T TG 26 PASS INDEL;BAVGPOST=0.995;BRSQ=0.554;LDAF=0.0043;AVGPOST=0.9944;RSQ=0.4811;ERATE=0.0010;THETA=0.0227;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169086940 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0002;THETA=0.0300;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169087041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0003;THETA=0.0263;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169087263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0116;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169087450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6471;ERATE=0.0003;THETA=0.0088;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169087494 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1957;AVGPOST=0.9963;RSQ=0.9938;ERATE=0.0003;THETA=0.0047;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 169087549 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0074;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169087610 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0072;AVGPOST=0.9984;RSQ=0.9237;ERATE=0.0003;THETA=0.0114;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169087657 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6803;ERATE=0.0002;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169087665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1938;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0002;THETA=0.0081;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 169087736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5120;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169087787 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.999;LDAF=0.5913;AVGPOST=0.9984;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=1293;AN=2184 GT:DS:GL:BD 0.59203297 1
1 169087868 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9536;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169087920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5647;AVGPOST=0.9985;RSQ=0.9981;ERATE=0.0003;THETA=0.0011;AC=1235;AN=2184 GT:DS:GL:BD 0.56547618 1
1 169087923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8033;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169087964 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.5627;AVGPOST=0.9952;RSQ=0.9940;ERATE=0.0010;THETA=0.0004;AC=1232;AN=2184 GT:DS:GL:BD 0.56410259 1
1 169087976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0082;AVGPOST=0.9996;RSQ=0.9768;ERATE=0.0003;THETA=0.0025;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169088086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6817;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169088132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.5646;AVGPOST=0.9990;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=1235;AN=2184 GT:DS:GL:BD 0.56547618 1
1 169088209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.537;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5393;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169088266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5509;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169088268 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0266;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0002;THETA=0.0007;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 169088314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1948;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0002;THETA=0.0004;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 169088337 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3707;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0009;AC=810;AN=2184 GT:DS:GL:BD 0.37087911 0
1 169088388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2276;AVGPOST=0.9959;RSQ=0.9917;ERATE=0.0003;THETA=0.0009;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 169088455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3704;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0005;THETA=0.0005;AC=810;AN=2184 GT:DS:GL:BD 0.37087911 0
1 169088456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1944;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0005;THETA=0.0008;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 169088485 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0002;THETA=0.0017;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169088498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8941;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169088522 rs111595157 TTTG T 4679 PASS INDEL;BAVGPOST=0.996;BRSQ=0.968;LDAF=0.0266;AVGPOST=0.9971;RSQ=0.9597;ERATE=0.0005;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 169088679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0879;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0002;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 169088782 . GAA G 484 PASS INDEL;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8630;ERATE=0.0004;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169088787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5516;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169088930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0241;AVGPOST=0.9989;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 169088947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0891;AVGPOST=0.9994;RSQ=0.9969;ERATE=0.0002;THETA=0.0007;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 169088952 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6329;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169089002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5711;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169089049 . T TG 11375 PASS INDEL;BAVGPOST=0.983;BRSQ=0.970;LDAF=0.3656;AVGPOST=0.9908;RSQ=0.9854;ERATE=0.0004;THETA=0.0005;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 169089050 rs35706435 G GT 43360 PASS INDEL;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.3688;AVGPOST=0.9929;RSQ=0.9887;ERATE=0.0005;THETA=0.0007;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 169089102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169089105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169089168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8593;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169089287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9060;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169089351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9146;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169089468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9232;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169089540 . G GT 158 PASS INDEL;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6615;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169089541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169089588 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3718;AVGPOST=0.9954;RSQ=0.9924;ERATE=0.0012;THETA=0.0002;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 169089604 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169089622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169089657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9314;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169089711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8821;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169089834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6229;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169090041 . TA T 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4590;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169090051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8973;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169090217 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.901;LDAF=0.0976;AVGPOST=0.9834;RSQ=0.9279;ERATE=0.0010;THETA=0.0009;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 169090232 . CTGGAG C 6400 PASS INDEL;BAVGPOST=0.986;BRSQ=0.930;LDAF=0.0960;AVGPOST=0.9884;RSQ=0.9486;ERATE=0.0004;THETA=0.0004;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 169090355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.821;LDAF=0.0087;AVGPOST=0.9960;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169090414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.592;LDAF=0.0141;AVGPOST=0.9887;RSQ=0.6728;ERATE=0.0040;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169090452 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7427;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169090480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9239;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169090495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9238;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169090559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169090660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2429;AVGPOST=0.9961;RSQ=0.9926;ERATE=0.0004;THETA=0.0006;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 169090699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9533;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169090712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5508;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=1204;AN=2184 GT:DS:GL:BD 0.55128205 1
1 169090720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8657;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169090748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0053;AVGPOST=0.9991;RSQ=0.9446;ERATE=0.0002;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169090764 . C CT 119 PASS INDEL;BAVGPOST=0.990;BRSQ=0.522;LDAF=0.0170;AVGPOST=0.9805;RSQ=0.5497;ERATE=0.0046;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169090883 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0389;AVGPOST=0.9995;RSQ=0.9940;ERATE=0.0002;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 169090971 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1007;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 169091077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8363;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169091119 . TCA T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5266;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169091152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0268;AVGPOST=0.9992;RSQ=0.9910;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 169091229 rs3834008 AG A 13283 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0880;AVGPOST=0.9968;RSQ=0.9850;ERATE=0.0005;THETA=0.0019;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 169091466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5525;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0005;THETA=0.0016;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 169091613 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169091799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0145;AVGPOST=0.9993;RSQ=0.9806;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169091909 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7885;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169091920 rs72399693 CTA C 29635 PASS INDEL;BAVGPOST=0.984;BRSQ=0.961;LDAF=0.1864;AVGPOST=0.9915;RSQ=0.9835;ERATE=0.0006;THETA=0.0003;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 169091943 . C CCCCATAATT 4620 PASS INDEL;BAVGPOST=0.992;BRSQ=0.791;LDAF=0.0190;AVGPOST=0.9937;RSQ=0.8835;ERATE=0.0005;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 169092010 . A AT 88 PASS INDEL;BAVGPOST=0.964;BRSQ=0.295;LDAF=0.0379;AVGPOST=0.9550;RSQ=0.5065;ERATE=0.0038;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 169092034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169092036 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169092123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3536;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0005;THETA=0.0001;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 169092198 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8330;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169092286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169092363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169092450 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8927;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169092476 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3493;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0002;THETA=0.0005;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 169092512 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8152;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169092642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0127;AVGPOST=0.9968;RSQ=0.9052;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169092776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0040;AVGPOST=0.9974;RSQ=0.7589;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169092786 . C CT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5993;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169092849 . CTCTA C 104 PASS INDEL;BAVGPOST=0.996;BRSQ=0.571;LDAF=0.0062;AVGPOST=0.9926;RSQ=0.4951;ERATE=0.0009;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169092886 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.432;LDAF=0.0026;AVGPOST=0.9962;RSQ=0.3377;ERATE=0.0010;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169092972 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0909;AVGPOST=0.9941;RSQ=0.9725;ERATE=0.0009;THETA=0.0005;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 169093057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0021;AVGPOST=0.9969;RSQ=0.4554;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169093101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6752;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0007;THETA=0.0006;AC=1476;AN=2184 GT:DS:GL:BD 0.67582417 1
1 169093130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0026;AVGPOST=0.9963;RSQ=0.4742;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169093398 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5430;AVGPOST=0.9979;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=1186;AN=2184 GT:DS:GL:BD 0.54304028 1
1 169093438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169093452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169093545 . C CT 884 PASS INDEL;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.8908;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169093557 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6117;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0004;THETA=0.0003;AC=1337;AN=2184 GT:DS:GL:BD 0.61217946 1
1 169093635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169093676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3320;AVGPOST=0.9972;RSQ=0.9957;ERATE=0.0011;THETA=0.0011;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 169093762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3355;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0003;THETA=0.0001;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 169093916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169094006 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169094065 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169094100 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6742;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0003;AC=1473;AN=2184 GT:DS:GL:BD 0.67445058 1
1 169094200 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169094216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169094340 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169094395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0009;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169094414 . C CT 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4340;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169094422 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8292;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169094459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3236;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 169094566 rs113079667 CTTACATCCG C 58657 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2874;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0008;THETA=0.0004;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 169094754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169094941 . G GT 840 PASS INDEL;BAVGPOST=0.997;BRSQ=0.743;LDAF=0.0067;AVGPOST=0.9967;RSQ=0.8229;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169095080 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.980;LDAF=0.6063;AVGPOST=0.9913;RSQ=0.9874;ERATE=0.0010;THETA=0.0006;AC=1327;AN=2184 GT:DS:GL:BD 0.60760075 1
1 169095082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.978;LDAF=0.3209;AVGPOST=0.9937;RSQ=0.9911;ERATE=0.0003;THETA=0.0006;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 169095089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7215;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169095312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.972;LDAF=0.2169;AVGPOST=0.9878;RSQ=0.9774;ERATE=0.0010;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169095317 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.971;LDAF=0.2183;AVGPOST=0.9917;RSQ=0.9845;ERATE=0.0002;THETA=0.0003;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 169095382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2867;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0007;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 169095440 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0060;AVGPOST=0.9979;RSQ=0.8937;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169095525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8163;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169095585 rs34020851 G GTA 83567 PASS INDEL;BAVGPOST=0.986;BRSQ=0.979;LDAF=0.6080;AVGPOST=0.9930;RSQ=0.9893;ERATE=0.0007;THETA=0.0002;AC=1329;AN=2184 GT:DS:GL:BD 0.60851645 1
1 169095586 rs68130062 T TA 21194 PASS INDEL;BAVGPOST=0.967;BRSQ=0.945;LDAF=0.5879;AVGPOST=0.9601;RSQ=0.9451;ERATE=0.0065;THETA=0.0011;AC=1301;AN=2184 GT:DS:GL:BD 0.59569597 1
1 169095854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0150;AVGPOST=0.9987;RSQ=0.9607;ERATE=0.0004;THETA=0.0027;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169095940 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7583;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169096011 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.396;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.4807;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169096019 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8798;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169096118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.3024;AVGPOST=0.9885;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 169096119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.5892;AVGPOST=0.9881;RSQ=0.9846;ERATE=0.0004;THETA=0.0009;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 169096142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169096175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169096214 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9659;ERATE=0.0003;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169096286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169096416 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169096426 . GC G 15 PASS INDEL;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4044;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169096481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169096723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9892;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169096764 . AG A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6505;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169096827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0097;AVGPOST=0.9984;RSQ=0.9338;ERATE=0.0002;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169096983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8117;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169097015 . G GT 367 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0059;AVGPOST=0.9985;RSQ=0.8895;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169097056 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.964;LDAF=0.3055;AVGPOST=0.9822;RSQ=0.9741;ERATE=0.0006;THETA=0.0005;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 169097057 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.960;LDAF=0.3122;AVGPOST=0.9813;RSQ=0.9725;ERATE=0.0007;THETA=0.0004;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 169097064 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0153;AVGPOST=0.9986;RSQ=0.9684;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169097065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6883;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169097077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5244;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169097108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3247;AVGPOST=0.9959;RSQ=0.9943;ERATE=0.0004;THETA=0.0010;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 169097156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2864;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 169097160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169097165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3265;AVGPOST=0.9980;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 169097200 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169097295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5664;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169097328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7986;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169097338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0125;AVGPOST=0.9978;RSQ=0.9373;ERATE=0.0004;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169097367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0083;AVGPOST=0.9993;RSQ=0.9623;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169097403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169097453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169097463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0867;AVGPOST=0.9984;RSQ=0.9937;ERATE=0.0002;THETA=0.0002;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 169097510 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169097541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3247;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 169097562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6573;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169097584 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5106;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169097595 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6669;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169097718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169097774 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7486;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169097879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169098053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169098084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169098275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2733;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0003;THETA=0.0008;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 169098341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169098363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2292;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0002;THETA=0.0010;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 169098578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8231;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169098595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0136;AVGPOST=0.9993;RSQ=0.9782;ERATE=0.0003;THETA=0.0021;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169098660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0055;AVGPOST=0.9987;RSQ=0.9071;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169098734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0863;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 169098738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2288;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0011;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 169098849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9077;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169098954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0029;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169099037 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0883;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0002;THETA=0.0004;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 169099061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6602;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0005;THETA=0.0008;AC=1442;AN=2184 GT:DS:GL:BD 0.66025639 1
1 169099123 . CTT C 5102 PASS INDEL;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0263;AVGPOST=0.9976;RSQ=0.9666;ERATE=0.0003;THETA=0.0033;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 169099137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0454;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0002;THETA=0.0003;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 169099176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169099216 . AATCTACTG A 874 PASS INDEL;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0042;AVGPOST=0.9978;RSQ=0.8007;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169099226 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0352;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 169099280 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8143;ERATE=0.0004;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169099415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169099483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0888;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0002;THETA=0.0006;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 169099502 . AAAAG A 113 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169099513 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0178;AVGPOST=0.9994;RSQ=0.9881;ERATE=0.0002;THETA=0.0040;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 169099636 rs58764076 A ACTT 81450 PASS INDEL;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6062;AVGPOST=0.9929;RSQ=0.9888;ERATE=0.0008;THETA=0.0007;AC=1326;AN=2184 GT:DS:GL:BD 0.60714287 1
1 169099637 rs72032959 CT C 305 PASS INDEL;BAVGPOST=0.968;BRSQ=0.534;LDAF=0.0569;AVGPOST=0.9331;RSQ=0.4881;ERATE=0.0210;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 169099639 rs75339654 T TC 9436 PASS INDEL;BAVGPOST=0.906;BRSQ=0.828;LDAF=0.4953;AVGPOST=0.8666;RSQ=0.8000;ERATE=0.0289;THETA=0.0026;AC=1118;AN=2184 GT:DS:GL:BD 0.51190478 1
1 169099679 rs35742469 TA T 20444 PASS INDEL;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.2790;AVGPOST=0.9927;RSQ=0.9900;ERATE=0.0011;THETA=0.0004;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 169099723 . T TG 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4659;ERATE=0.0006;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169099724 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8816;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169099765 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2632;AVGPOST=0.9973;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 169099795 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0895;AVGPOST=0.9963;RSQ=0.9824;ERATE=0.0004;THETA=0.0003;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 169099941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.946;LDAF=0.5913;AVGPOST=0.9768;RSQ=0.9684;ERATE=0.0007;THETA=0.0003;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 169099945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.945;LDAF=0.5914;AVGPOST=0.9773;RSQ=0.9689;ERATE=0.0007;THETA=0.0003;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 169099946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.970;LDAF=0.2712;AVGPOST=0.9866;RSQ=0.9807;ERATE=0.0009;THETA=0.0036;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 169100095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2754;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0004;THETA=0.0007;AC=603;AN=2184 GT:DS:GL:BD 0.27609891 0
1 169100105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0145;AVGPOST=0.9993;RSQ=0.9807;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169100108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169100169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6057;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=1324;AN=2184 GT:DS:GL:BD 0.60622710 1
1 169100241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6521;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=1425;AN=2184 GT:DS:GL:BD 0.65247256 1
1 169100263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169100338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0224;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 169100374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169100397 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169100715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169100833 . TAAAA T 210 PASS INDEL;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9610;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169100977 . ATATT A 182 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9620;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169101060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2630;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0030;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 169101230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8170;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169101265 . T TG 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4728;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169101268 . T TG 317 PASS INDEL;BAVGPOST=0.995;BRSQ=0.821;LDAF=0.0117;AVGPOST=0.9942;RSQ=0.8050;ERATE=0.0007;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169101269 . T TG 6774 PASS INDEL;BAVGPOST=0.992;BRSQ=0.966;LDAF=0.0910;AVGPOST=0.9946;RSQ=0.9758;ERATE=0.0008;THETA=0.0003;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 169101288 . G GCT 57 PASS INDEL;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0111;AVGPOST=0.9941;RSQ=0.8161;ERATE=0.0004;THETA=0.0023;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169101289 . C CTCT 730 PASS INDEL;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0102;AVGPOST=0.9961;RSQ=0.8637;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169101295 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9287;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169101312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0064;AVGPOST=0.9953;RSQ=0.7486;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169101463 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169101526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9387;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169101557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9782;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169101653 . G GTCTT 161 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169101760 . CAA C 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4035;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169101804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169101831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169101847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169101935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2761;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=604;AN=2184 GT:DS:GL:BD 0.27655679 0
1 169101964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169101997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169102047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169102223 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2569;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0007;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 169102300 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0277;AVGPOST=0.9967;RSQ=0.9554;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 169102313 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2432;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0005;AC=530;AN=2184 GT:DS:GL:BD 0.24267399 0
1 169102319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7948;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169102340 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0878;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 169102360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169102398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2619;AVGPOST=0.9991;RSQ=0.9988;ERATE=0.0002;THETA=0.0006;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 169102484 rs74601703 A AAT 47767 PASS INDEL;BAVGPOST=0.984;BRSQ=0.973;LDAF=0.6494;AVGPOST=0.9916;RSQ=0.9871;ERATE=0.0004;THETA=0.0004;AC=1419;AN=2184 GT:DS:GL:BD 0.64972526 1
1 169102485 rs71121724 A ATC 99157 PASS INDEL;BAVGPOST=0.984;BRSQ=0.973;LDAF=0.6498;AVGPOST=0.9904;RSQ=0.9845;ERATE=0.0017;THETA=0.0003;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 169102591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7346;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169102601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169102682 . GAGAC G 151 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6399;ERATE=0.0004;THETA=0.0049;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169102690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5188;AVGPOST=0.9971;RSQ=0.9956;ERATE=0.0005;THETA=0.0005;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 169102705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0283;AVGPOST=0.9951;RSQ=0.9368;ERATE=0.0008;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 169102818 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7677;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169102865 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169102976 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5754;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169103030 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7550;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169103195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3888;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0004;THETA=0.0006;AC=848;AN=2184 GT:DS:GL:BD 0.38827839 0
1 169103292 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6958;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169103323 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2436;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0003;THETA=0.0006;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 169103573 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169103603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9133;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169103605 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8851;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169103665 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0095;AVGPOST=0.9985;RSQ=0.9482;ERATE=0.0002;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169103771 . CTT C 114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169103854 . CAA C 564 PASS INDEL;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0034;AVGPOST=0.9952;RSQ=0.4503;ERATE=0.0015;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169103954 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0874;AVGPOST=0.9973;RSQ=0.9876;ERATE=0.0005;THETA=0.0008;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 169104147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7096;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169104210 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6475;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169104288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4243;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169104301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5749;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169104324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5398;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169104357 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9997;RSQ=0.9716;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169104786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0042;AVGPOST=0.9993;RSQ=0.9319;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169104906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0096;AVGPOST=0.9984;RSQ=0.9309;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169105059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0143;AVGPOST=0.9983;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169105092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0045;AVGPOST=0.9967;RSQ=0.7622;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169105140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7709;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169105342 rs68151029 ACATATATCGGGCACAGC A 69577 PASS INDEL;BAVGPOST=0.972;BRSQ=0.953;LDAF=0.5079;AVGPOST=0.9692;RSQ=0.9592;ERATE=0.0038;THETA=0.0005;AC=1115;AN=2184 GT:DS:GL:BD 0.51053113 1
1 169105503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169105505 . T TG 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6619;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169105539 . T TA 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4676;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169105559 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6168;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169105636 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5183;AVGPOST=0.9970;RSQ=0.9960;ERATE=0.0005;THETA=0.0006;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 169105644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9046;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169105702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5196;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=1134;AN=2184 GT:DS:GL:BD 0.51923078 1
1 169105741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169105831 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169105844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2624;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 169105859 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169105867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169105882 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2622;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 169105904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8734;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169105927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169105948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169106003 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3595;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169106051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169106177 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169106377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3067;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169106457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4196;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169106634 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8687;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169106774 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169106815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169106818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7820;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169106922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8416;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169106980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.1773;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 169106998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5703;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169107144 . C CA 438 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169107331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.781;LDAF=0.0221;AVGPOST=0.9920;RSQ=0.8522;ERATE=0.0008;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 169107365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.956;LDAF=0.2425;AVGPOST=0.9802;RSQ=0.9639;ERATE=0.0008;THETA=0.0002;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 169107369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.908;LDAF=0.0199;AVGPOST=0.9949;RSQ=0.9045;ERATE=0.0004;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 169107377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.953;LDAF=0.2548;AVGPOST=0.9782;RSQ=0.9588;ERATE=0.0006;THETA=0.0003;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 169107473 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6550;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169107484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.2579;AVGPOST=0.9973;RSQ=0.9945;ERATE=0.0006;THETA=0.0006;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 169107537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9506;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169107542 rs58759871 C CCTT 33618 PASS INDEL;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.2618;AVGPOST=0.9948;RSQ=0.9918;ERATE=0.0010;THETA=0.0003;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 169107568 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169107595 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.5737;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169107605 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.6945;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169107734 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.678;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.6748;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169107846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2295;AVGPOST=0.9982;RSQ=0.9962;ERATE=0.0006;THETA=0.0002;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 169107879 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9792;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169108062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0250;AVGPOST=0.9982;RSQ=0.9730;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 169108312 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9565;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169108351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8178;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169108414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169108505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169108629 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6956;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169108697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169108819 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5183;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0009;THETA=0.0002;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 169109076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0131;AVGPOST=0.9986;RSQ=0.9599;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169109215 . AAT A 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5755;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169109247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9996;RSQ=0.9424;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169109351 . AAT A 20 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169109352 . ATAT A 1180 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9322;ERATE=0.0002;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169109374 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8101;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169109384 . AAGAC A 95 PASS INDEL;BAVGPOST=0.999;BRSQ=0.578;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5500;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169109393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2569;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 169109565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169109790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169109799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169110013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8614;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169110104 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169110231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7985;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169110304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8359;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169110380 . G GA 157 PASS INDEL;BAVGPOST=0.990;BRSQ=0.617;LDAF=0.0229;AVGPOST=0.9719;RSQ=0.5065;ERATE=0.0091;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169110407 . ATAGT A 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6473;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169110425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2580;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0002;THETA=0.0004;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 169110431 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5204;AVGPOST=0.9978;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=1136;AN=2184 GT:DS:GL:BD 0.52014655 1
1 169110528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169110687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169110694 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169110793 . TGA T 8878 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0671;AVGPOST=0.9987;RSQ=0.9902;ERATE=0.0004;THETA=0.0002;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 169110840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169110865 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7632;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169110881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5207;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169110992 . C CT 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0053;AVGPOST=0.9986;RSQ=0.8796;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169111001 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.5193;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=1134;AN=2184 GT:DS:GL:BD 0.51923078 1
1 169111009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.784;LDAF=0.0072;AVGPOST=0.9967;RSQ=0.8580;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169111036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.2566;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0002;THETA=0.0004;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 169111352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5181;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169111421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169111592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0669;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 169111592 . AATAAG A 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7531;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169111604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8586;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169111661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2566;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0003;THETA=0.0008;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 169111806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169111869 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2279;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0005;THETA=0.0002;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 169111918 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5186;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 169112023 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.8990;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169112076 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.821;LDAF=0.0132;AVGPOST=0.9925;RSQ=0.7714;ERATE=0.0015;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169112201 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8854;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169112395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.5213;AVGPOST=0.9965;RSQ=0.9949;ERATE=0.0004;THETA=0.0003;AC=1139;AN=2184 GT:DS:GL:BD 0.52152014 1
1 169112399 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2584;AVGPOST=0.9976;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 169112483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0002;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169112504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5181;AVGPOST=0.9975;RSQ=0.9963;ERATE=0.0005;THETA=0.0028;AC=1131;AN=2184 GT:DS:GL:BD 0.51785713 1
1 169112631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5688;AVGPOST=0.9960;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 169112668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1871;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0002;THETA=0.0004;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 169112694 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0863;AVGPOST=0.9992;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 169112703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5216;AVGPOST=0.9981;RSQ=0.9973;ERATE=0.0006;THETA=0.0003;AC=1139;AN=2184 GT:DS:GL:BD 0.52152014 1
1 169112704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169112831 . G GC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5516;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169112845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7944;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169112856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2568;AVGPOST=0.9966;RSQ=0.9938;ERATE=0.0006;THETA=0.0009;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 169113028 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7036;ERATE=0.0004;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169113282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2626;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 169113294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169113448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169113467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5213;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=1138;AN=2184 GT:DS:GL:BD 0.52106225 1
1 169113519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6277;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169113538 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9106;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169113564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169113577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8416;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169113621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8733;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169113647 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169113654 . GT G 103 PASS INDEL;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0039;AVGPOST=0.9964;RSQ=0.6538;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169113668 . AT A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8363;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169113679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.850;LDAF=0.0255;AVGPOST=0.9930;RSQ=0.8967;ERATE=0.0008;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 169113705 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169113832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9079;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169113844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169113867 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169113881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2123;AVGPOST=0.9988;RSQ=0.9972;ERATE=0.0003;THETA=0.0042;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 169113889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169113928 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9077;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169113929 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8491;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169113999 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169114000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169114005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5602;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169114226 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5321;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169114251 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.7171;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169114344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9421;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169114457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169114467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1896;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0002;THETA=0.0005;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 169114512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169114619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9896;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169114623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9374;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169114635 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4779;AVGPOST=0.9981;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=1043;AN=2184 GT:DS:GL:BD 0.47756410 0
1 169114735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9524;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169114829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2622;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0006;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 169114900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0167;AVGPOST=0.9987;RSQ=0.9685;ERATE=0.0002;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 169115022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0216;AVGPOST=0.9995;RSQ=0.9885;ERATE=0.0002;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169115049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169115099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169115134 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2152;AVGPOST=0.9981;RSQ=0.9955;ERATE=0.0005;THETA=0.0003;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 169115138 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2622;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 169115164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0253;AVGPOST=0.9997;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 169115166 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169115339 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6018;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169115395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169115402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0073;AVGPOST=0.9996;RSQ=0.9775;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169115590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.721;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8128;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169115644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8581;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169115724 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.653;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7109;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169115746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4772;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0008;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 169115765 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0065;AVGPOST=0.9974;RSQ=0.8532;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169115821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2638;AVGPOST=0.9982;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 169115833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2197;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 169115856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2160;AVGPOST=0.9981;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 169115960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7441;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169116017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4755;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0005;THETA=0.0006;AC=1038;AN=2184 GT:DS:GL:BD 0.47527471 0
1 169116109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4773;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 169116247 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0654;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 169116289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8417;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169116350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4775;AVGPOST=0.9975;RSQ=0.9963;ERATE=0.0005;THETA=0.0006;AC=1043;AN=2184 GT:DS:GL:BD 0.47756410 0
1 169116354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.794;LDAF=0.0041;AVGPOST=0.9980;RSQ=0.8099;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169116446 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4630;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0006;THETA=0.0005;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 169116551 . TCTCA T 417 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.8971;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169116577 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.998;LDAF=0.1842;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0004;THETA=0.0002;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 169116701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4775;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 169116756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6659;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169116785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6873;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169116842 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169116866 . C CAAT 37263 PASS INDEL;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4763;AVGPOST=0.9945;RSQ=0.9912;ERATE=0.0014;THETA=0.0004;AC=1041;AN=2184 GT:DS:GL:BD 0.47664836 0
1 169116972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169116976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169116979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7358;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169117056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6819;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169117128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6296;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169117130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0149;AVGPOST=0.9995;RSQ=0.9822;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169117238 . CTTTTA C 160 PASS INDEL;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0030;AVGPOST=0.9956;RSQ=0.4985;ERATE=0.0006;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169117248 rs68020438 AT A 30286 PASS INDEL;BAVGPOST=0.984;BRSQ=0.965;LDAF=0.7121;AVGPOST=0.9443;RSQ=0.8995;ERATE=0.0105;THETA=0.0005;AC=1577;AN=2184 GT:DS:GL:BD 0.72206962 1
1 169117258 . TG T 197 PASS INDEL;BAVGPOST=0.968;BRSQ=0.403;LDAF=0.0454;AVGPOST=0.9497;RSQ=0.5529;ERATE=0.0043;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 169117271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.680;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7926;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169117443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8452;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169117482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4772;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 169117488 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0710;AVGPOST=0.9985;RSQ=0.9894;ERATE=0.0003;THETA=0.0002;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 169117533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7510;AVGPOST=0.9975;RSQ=0.9944;ERATE=0.0003;THETA=0.0006;AC=1642;AN=2184 GT:DS:GL:BD 0.75183153 1
1 169117642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169117725 . TG T 12520 PASS INDEL;BAVGPOST=0.983;BRSQ=0.972;LDAF=0.4702;AVGPOST=0.9846;RSQ=0.9787;ERATE=0.0017;THETA=0.0002;AC=1029;AN=2184 GT:DS:GL:BD 0.47115386 0
1 169117728 rs34089647 GA G 48528 PASS INDEL;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.4773;AVGPOST=0.9953;RSQ=0.9927;ERATE=0.0009;THETA=0.0005;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 169117843 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6352;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169117882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1851;AVGPOST=0.9983;RSQ=0.9959;ERATE=0.0003;THETA=0.0009;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 169118037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8196;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169118055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169118126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7129;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169118273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169118308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4625;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0004;THETA=0.0005;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 169118391 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0148;AVGPOST=0.9994;RSQ=0.9807;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169118436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169118544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4267;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169118587 . T TA 18797 PASS INDEL;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.1888;AVGPOST=0.9941;RSQ=0.9886;ERATE=0.0006;THETA=0.0003;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 169118600 . TA T 272 PASS INDEL;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0038;AVGPOST=0.9978;RSQ=0.7931;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169118662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.832;LDAF=0.0049;AVGPOST=0.9990;RSQ=0.9254;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169118690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4814;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169118820 . GCA G 228 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8654;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169118945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9853;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169118954 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4781;AVGPOST=0.9970;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 169119119 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169119213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8396;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169119231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7393;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169119252 . ACT A 34 PASS INDEL;BAVGPOST=0.997;BRSQ=0.731;LDAF=0.0094;AVGPOST=0.9918;RSQ=0.6488;ERATE=0.0018;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169119255 . TA T 16 PASS INDEL;BAVGPOST=0.997;BRSQ=0.687;LDAF=0.0061;AVGPOST=0.9952;RSQ=0.6803;ERATE=0.0017;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169119363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169119460 . ATG A 80 PASS INDEL;BAVGPOST=0.996;BRSQ=0.744;LDAF=0.0158;AVGPOST=0.9834;RSQ=0.5796;ERATE=0.0055;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169119822 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5719;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169120141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1863;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0002;THETA=0.0004;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 169120143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9846;ERATE=0.0004;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169120144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1898;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 169120176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0131;AVGPOST=0.9983;RSQ=0.9501;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169120214 . AAT A 10 PASS INDEL;BAVGPOST=0.996;BRSQ=0.847;LDAF=0.0148;AVGPOST=0.9986;RSQ=0.9652;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169120215 . ATAT A 2211 PASS INDEL;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169120221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9366;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169120281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0057;AVGPOST=0.9984;RSQ=0.8931;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169120396 rs5778603 CA C 35550 PASS INDEL;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.4759;AVGPOST=0.9859;RSQ=0.9793;ERATE=0.0030;THETA=0.0004;AC=1039;AN=2184 GT:DS:GL:BD 0.47573259 0
1 169120431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4796;AVGPOST=0.9968;RSQ=0.9951;ERATE=0.0005;THETA=0.0003;AC=1048;AN=2184 GT:DS:GL:BD 0.47985348 0
1 169120447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2046;AVGPOST=0.9979;RSQ=0.9947;ERATE=0.0005;THETA=0.0002;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 169120470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7153;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169120525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169120542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0150;AVGPOST=0.9986;RSQ=0.9636;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169120747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169120820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5337;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169120831 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.7883;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169120832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.7007;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169120914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6508;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169120930 . G GT 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4510;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169120994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9061;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169121006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9902;ERATE=0.0002;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169121008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4140;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169121043 rs3835442 CTCTG C 7462 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0702;AVGPOST=0.9992;RSQ=0.9941;ERATE=0.0004;THETA=0.0004;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 169121080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0112;AVGPOST=0.9993;RSQ=0.9719;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169121237 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7328;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169121298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9497;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169121469 rs35682595 G GATA 44453 PASS INDEL;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4744;AVGPOST=0.9688;RSQ=0.9557;ERATE=0.0051;THETA=0.0005;AC=1037;AN=2184 GT:DS:GL:BD 0.47481686 0
1 169121483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5513;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169121525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169121582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9417;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169121598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0061;AVGPOST=0.9978;RSQ=0.8584;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169121701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169121731 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4630;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0005;THETA=0.0004;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 169121811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4627;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0005;THETA=0.0004;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 169121868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4626;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 169121996 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7676;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169122101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9157;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169122254 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4626;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0005;THETA=0.0004;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 169122289 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9989;RSQ=0.9731;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169122358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9501;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169122436 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9117;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169122467 . TA T 2011 PASS INDEL;BAVGPOST=0.663;BRSQ=0.396;LDAF=0.2940;AVGPOST=0.8064;RSQ=0.6472;ERATE=0.0116;THETA=0.0005;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 169122470 rs5778604 AC A 31258 PASS INDEL;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.1838;AVGPOST=0.9954;RSQ=0.9911;ERATE=0.0004;THETA=0.0007;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 169122475 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4614;AVGPOST=0.9968;RSQ=0.9956;ERATE=0.0006;THETA=0.0007;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 169122538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169122577 . TC T 552 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8633;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169122617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0857;AVGPOST=0.9990;RSQ=0.9949;ERATE=0.0002;THETA=0.0004;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 169122829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4644;AVGPOST=0.9967;RSQ=0.9954;ERATE=0.0005;THETA=0.0002;AC=1015;AN=2184 GT:DS:GL:BD 0.46474358 0
1 169122865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4625;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0002;THETA=0.0005;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 169122933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4783;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 169123046 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4780;AVGPOST=0.9955;RSQ=0.9929;ERATE=0.0017;THETA=0.0005;AC=1043;AN=2184 GT:DS:GL:BD 0.47756410 0
1 169123130 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0152;AVGPOST=0.9990;RSQ=0.9777;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169123140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6334;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169123172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5316;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169123223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4770;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0004;THETA=0.0003;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 169123266 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4625;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0002;THETA=0.0003;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 169123298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0076;AVGPOST=0.9996;RSQ=0.9764;ERATE=0.0002;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169123591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0120;AVGPOST=0.9984;RSQ=0.9392;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169123592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4778;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0007;THETA=0.0002;AC=1043;AN=2184 GT:DS:GL:BD 0.47756410 0
1 169123708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169123709 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0002;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169123732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169123783 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.564;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5778;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169123864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0166;AVGPOST=0.9983;RSQ=0.9537;ERATE=0.0005;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 169123881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.4735;AVGPOST=0.9952;RSQ=0.9925;ERATE=0.0009;THETA=0.0003;AC=1034;AN=2184 GT:DS:GL:BD 0.47344321 0
1 169123906 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.944;LDAF=0.4491;AVGPOST=0.9638;RSQ=0.9486;ERATE=0.0043;THETA=0.0002;AC=993;AN=2184 GT:DS:GL:BD 0.45467034 0
1 169123951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0161;AVGPOST=0.9967;RSQ=0.9156;ERATE=0.0006;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169124014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8329;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169124015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0165;AVGPOST=0.9962;RSQ=0.8958;ERATE=0.0007;THETA=0.0012;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169124154 . AT A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0033;AVGPOST=0.9954;RSQ=0.4457;ERATE=0.0009;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169124208 . T TA 1174 PASS INDEL;BAVGPOST=0.993;BRSQ=0.831;LDAF=0.0293;AVGPOST=0.9797;RSQ=0.7256;ERATE=0.0028;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169124209 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.978;LDAF=0.4739;AVGPOST=0.9888;RSQ=0.9832;ERATE=0.0015;THETA=0.0004;AC=1039;AN=2184 GT:DS:GL:BD 0.47573259 0
1 169124213 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0096;AVGPOST=0.9979;RSQ=0.9057;ERATE=0.0006;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169124217 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0273;AVGPOST=0.9890;RSQ=0.8458;ERATE=0.0015;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 169124262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8692;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169124367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7395;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169124402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1856;AVGPOST=0.9976;RSQ=0.9944;ERATE=0.0005;THETA=0.0001;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 169124449 rs71984357 TATCA T 50120 PASS INDEL;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.4607;AVGPOST=0.9786;RSQ=0.9702;ERATE=0.0044;THETA=0.0004;AC=1007;AN=2184 GT:DS:GL:BD 0.46108058 0
1 169124503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169124587 . G GGGTT 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169124639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4772;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0011;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 169124664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7643;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169124691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6762;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169124720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1842;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0006;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 169124721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9677;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169124807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0002;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169124960 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169125185 . T TA 2238 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9994;RSQ=0.9818;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169125256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1898;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 169125459 . G GA 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4704;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169125600 rs34194554 G GA 49045 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4766;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0006;THETA=0.0004;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 169125655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0246;AVGPOST=0.9989;RSQ=0.9819;ERATE=0.0003;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 169125759 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4771;AVGPOST=0.9981;RSQ=0.9970;ERATE=0.0005;THETA=0.0004;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 169125773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5072;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169125795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4772;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0007;THETA=0.0005;AC=1043;AN=2184 GT:DS:GL:BD 0.47756410 0
1 169125997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169126002 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5164;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169126031 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0667;AVGPOST=0.9993;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 169126102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9996;RSQ=0.9895;ERATE=0.0002;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169126144 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6894;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169126211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2020;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0002;THETA=0.0002;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 169126278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.9031;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169126338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0002;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169126401 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4771;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 169126412 . GA G 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4045;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169126558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4772;AVGPOST=0.9975;RSQ=0.9963;ERATE=0.0005;THETA=0.0002;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 169126729 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169126856 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4767;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0006;THETA=0.0003;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 169126862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169126893 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9809;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169126895 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7118;AVGPOST=0.9973;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=1555;AN=2184 GT:DS:GL:BD 0.71199632 1
1 169126931 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5769;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169127038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6343;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169127077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0080;AVGPOST=0.9986;RSQ=0.9318;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169127246 . GT G 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4362;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169127532 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4648;AVGPOST=0.9952;RSQ=0.9928;ERATE=0.0011;THETA=0.0004;AC=1014;AN=2184 GT:DS:GL:BD 0.46428570 0
1 169127591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4770;AVGPOST=0.9978;RSQ=0.9968;ERATE=0.0004;THETA=0.0041;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 169127691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169127847 . T TA 109 PASS INDEL;BAVGPOST=0.994;BRSQ=0.738;LDAF=0.0072;AVGPOST=0.9929;RSQ=0.6223;ERATE=0.0011;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169127898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0102;AVGPOST=0.9995;RSQ=0.9816;ERATE=0.0002;THETA=0.0014;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169127908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0669;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0003;THETA=0.0007;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 169128012 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7596;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169128072 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6768;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169128155 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0097;AVGPOST=0.9986;RSQ=0.9483;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169128226 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8121;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169128280 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169128324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.983;LDAF=0.2572;AVGPOST=0.9914;RSQ=0.9869;ERATE=0.0026;THETA=0.0006;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 169128573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7986;ERATE=0.0003;THETA=0.0067;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169128626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0041;AVGPOST=0.9993;RSQ=0.9372;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169128627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0154;AVGPOST=0.9994;RSQ=0.9854;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169128664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4632;AVGPOST=0.9976;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=1012;AN=2184 GT:DS:GL:BD 0.46336997 0
1 169128689 . AAATT A 2499 PASS INDEL;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0147;AVGPOST=0.9967;RSQ=0.9056;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169128802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0719;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 169128975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0071;AVGPOST=0.9989;RSQ=0.9298;ERATE=0.0003;THETA=0.0024;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169129025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169129092 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7582;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169129108 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169129151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4659;AVGPOST=0.9981;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 169129262 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169129271 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4643;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=1014;AN=2184 GT:DS:GL:BD 0.46428570 0
1 169129320 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2637;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0015;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 169129331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9587;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169129433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169129467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169129469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4170;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169129521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5938;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169129556 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4647;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=1015;AN=2184 GT:DS:GL:BD 0.46474358 0
1 169129563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4645;AVGPOST=0.9981;RSQ=0.9971;ERATE=0.0006;THETA=0.0004;AC=1015;AN=2184 GT:DS:GL:BD 0.46474358 0
1 169129682 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4546;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=993;AN=2184 GT:DS:GL:BD 0.45467034 0
1 169129805 . TTAA T 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5025;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169129926 . AC A 2090 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0178;AVGPOST=0.9978;RSQ=0.9542;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 169129953 . TG T 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0033;AVGPOST=0.9954;RSQ=0.4634;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169130128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169130165 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5904;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169130173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6197;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169130224 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169130233 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169130287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4615;AVGPOST=0.9963;RSQ=0.9948;ERATE=0.0005;THETA=0.0004;AC=1007;AN=2184 GT:DS:GL:BD 0.46108058 0
1 169130538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0042;AVGPOST=0.9986;RSQ=0.8675;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169130622 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5817;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169130625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1681;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 169130690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169130733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4479;AVGPOST=0.9953;RSQ=0.9935;ERATE=0.0013;THETA=0.0004;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 169130765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0132;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0002;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169130823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0274;AVGPOST=0.9994;RSQ=0.9888;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 169130949 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169131061 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9912;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169131100 . CA C 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169131276 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.7021;ERATE=0.0003;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169131325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9631;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169131356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8791;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169131454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5300;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169131505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169131550 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4484;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0004;THETA=0.0002;AC=980;AN=2184 GT:DS:GL:BD 0.44871795 0
1 169131669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8690;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169131899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4494;AVGPOST=0.9966;RSQ=0.9951;ERATE=0.0008;THETA=0.0004;AC=980;AN=2184 GT:DS:GL:BD 0.44871795 0
1 169131906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4936;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169131918 . C CA 452 PASS INDEL;BAVGPOST=0.978;BRSQ=0.613;LDAF=0.0510;AVGPOST=0.9421;RSQ=0.5210;ERATE=0.0141;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 169131959 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6118;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169132132 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1681;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 169132234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4367;AVGPOST=0.9982;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 169132355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169132544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169132554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4498;AVGPOST=0.9984;RSQ=0.9978;ERATE=0.0006;THETA=0.0005;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 169132567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169132828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169132973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0166;AVGPOST=0.9989;RSQ=0.9796;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 169133025 . CT C 1948 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0159;AVGPOST=0.9994;RSQ=0.9827;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169133033 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9305;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169133050 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9805;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169133073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169133074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.4268;AVGPOST=0.9962;RSQ=0.9945;ERATE=0.0010;THETA=0.0003;AC=931;AN=2184 GT:DS:GL:BD 0.42628205 0
1 169133141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0743;AVGPOST=0.9987;RSQ=0.9908;ERATE=0.0004;THETA=0.0025;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 169133273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.974;LDAF=0.0773;AVGPOST=0.9971;RSQ=0.9825;ERATE=0.0005;THETA=0.0005;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169133277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.677;LDAF=0.0541;AVGPOST=0.9549;RSQ=0.6429;ERATE=0.0154;THETA=0.0019;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 169133282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5817;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169133315 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9972;RSQ=0.9463;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 169133317 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0185;AVGPOST=0.9958;RSQ=0.9151;ERATE=0.0009;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169133327 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169133397 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1738;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 169133467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9960;RSQ=0.8259;ERATE=0.0006;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169133494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8818;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169133508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4503;AVGPOST=0.9966;RSQ=0.9948;ERATE=0.0009;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169133534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9988;RSQ=0.8978;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169133621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0687;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 169133635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8558;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169133740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169133805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0717;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0010;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 169133932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9472;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169133936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4498;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169134027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1354;AVGPOST=0.9988;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 169134077 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6530;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169134131 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0002;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169134163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5149;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169134234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.7938;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169134255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6601;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169134308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5195;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169134321 . TTCTAGAATG T 1137 PASS INDEL;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.8875;ERATE=0.0004;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169134334 rs3981319 C CATATT 64074 PASS INDEL;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4512;AVGPOST=0.9851;RSQ=0.9797;ERATE=0.0019;THETA=0.0002;AC=987;AN=2184 GT:DS:GL:BD 0.45192307 0
1 169134514 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0106;AVGPOST=0.9993;RSQ=0.9700;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169134668 . GA G 2164 PASS INDEL;BAVGPOST=0.988;BRSQ=0.767;LDAF=0.0209;AVGPOST=0.9958;RSQ=0.9171;ERATE=0.0004;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 169134733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5558;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169134846 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169135045 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4496;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0006;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169135118 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.6736;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169135127 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0510;AVGPOST=0.9975;RSQ=0.9800;ERATE=0.0004;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 169135148 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0093;AVGPOST=0.9993;RSQ=0.9660;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169135195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4502;AVGPOST=0.9973;RSQ=0.9963;ERATE=0.0005;THETA=0.0004;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 169135429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6901;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0007;THETA=0.0005;AC=1508;AN=2184 GT:DS:GL:BD 0.69047618 1
1 169135452 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5242;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169135474 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9765;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169135796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169135807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169135862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4496;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0006;THETA=0.0004;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169135906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4496;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169135908 . AG A 176 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169136127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0159;AVGPOST=0.9994;RSQ=0.9824;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169136164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.966;LDAF=0.4478;AVGPOST=0.9930;RSQ=0.9898;ERATE=0.0011;THETA=0.0004;AC=980;AN=2184 GT:DS:GL:BD 0.44871795 0
1 169136186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0135;AVGPOST=0.9991;RSQ=0.9681;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169136235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9627;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169136358 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0777;AVGPOST=0.9990;RSQ=0.9939;ERATE=0.0004;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169136389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1348;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0004;THETA=0.0007;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 169136440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.607;LDAF=0.0076;AVGPOST=0.9939;RSQ=0.6787;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169136443 . T TATTA 8075 PASS INDEL;BAVGPOST=0.919;BRSQ=0.848;LDAF=0.3809;AVGPOST=0.8578;RSQ=0.7731;ERATE=0.0336;THETA=0.0005;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 169136449 rs34903596 T TAAAC 58392 PASS INDEL;BAVGPOST=0.977;BRSQ=0.962;LDAF=0.4446;AVGPOST=0.9921;RSQ=0.9890;ERATE=0.0003;THETA=0.0004;AC=976;AN=2184 GT:DS:GL:BD 0.44688645 0
1 169136758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.594;LDAF=0.0059;AVGPOST=0.9930;RSQ=0.5006;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169136774 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4476;AVGPOST=0.9963;RSQ=0.9945;ERATE=0.0005;THETA=0.0004;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 169136804 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4368;AVGPOST=0.9951;RSQ=0.9935;ERATE=0.0004;THETA=0.0004;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 169136833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.7048;AVGPOST=0.9982;RSQ=0.9963;ERATE=0.0005;THETA=0.0005;AC=1541;AN=2184 GT:DS:GL:BD 0.70558608 1
1 169136970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5611;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169137116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169137143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9763;ERATE=0.0002;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169137191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169137228 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0134;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0002;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169137273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0035;AVGPOST=0.9966;RSQ=0.6083;ERATE=0.0020;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169137276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4769;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169137277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7184;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0006;AC=1570;AN=2184 GT:DS:GL:BD 0.71886444 1
1 169137413 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.8911;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169137453 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4512;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 169137592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7185;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=1570;AN=2184 GT:DS:GL:BD 0.71886444 1
1 169137609 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169137650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169137659 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0022;AVGPOST=0.9998;RSQ=0.9641;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169137689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4362;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0005;THETA=0.0003;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 169137780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.838;LDAF=0.0136;AVGPOST=0.9935;RSQ=0.8187;ERATE=0.0005;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169137781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5722;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169137799 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4501;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0005;THETA=0.0002;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 169137933 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169137982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5332;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169138027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4499;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0005;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169138035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169138280 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169138307 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4356;AVGPOST=0.9969;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 169138318 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4490;AVGPOST=0.9971;RSQ=0.9960;ERATE=0.0004;THETA=0.0007;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 169138449 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0135;AVGPOST=0.9996;RSQ=0.9853;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169138531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169138532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169138586 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169138598 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0002;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169138603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169138610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169138708 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169138739 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169138803 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169138815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169138825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169138844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0002;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169138868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4498;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0002;THETA=0.0004;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169138960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169138963 . GAAA G 215 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0043;AVGPOST=0.9971;RSQ=0.7050;ERATE=0.0010;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169139026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169139096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6072;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169139190 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169139298 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169139447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.8201;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169139468 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8883;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169139486 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4486;AVGPOST=0.9989;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 169139521 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9070;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169139551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4364;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 169139641 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7995;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169139711 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4487;AVGPOST=0.9966;RSQ=0.9955;ERATE=0.0007;THETA=0.0003;AC=980;AN=2184 GT:DS:GL:BD 0.44871795 0
1 169139864 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169139878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4394;AVGPOST=0.9968;RSQ=0.9957;ERATE=0.0008;THETA=0.0003;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 169139890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9587;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169139958 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9992;RSQ=0.9228;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169140000 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.8059;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169140070 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8620;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169140094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8730;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169140105 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4375;AVGPOST=0.9964;RSQ=0.9948;ERATE=0.0006;THETA=0.0002;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 169140144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1575;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 169140195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9129;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169140260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0051;AVGPOST=0.9972;RSQ=0.8128;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169140279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4497;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0004;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169140314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4494;AVGPOST=0.9981;RSQ=0.9970;ERATE=0.0006;THETA=0.0002;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169140351 . AT A 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6590;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169140415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4497;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0004;THETA=0.0005;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169140496 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1709;AVGPOST=0.9976;RSQ=0.9940;ERATE=0.0006;THETA=0.0002;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 169140544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4498;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0006;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169140597 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1692;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 169140602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0084;AVGPOST=0.9985;RSQ=0.9202;ERATE=0.0007;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169140636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169140680 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169140683 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4366;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 169140871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0142;AVGPOST=0.9980;RSQ=0.9524;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169140872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1607;AVGPOST=0.9973;RSQ=0.9914;ERATE=0.0006;THETA=0.0003;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 169141019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5735;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169141023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4639;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169141116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5356;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169141157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5412;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169141291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0098;AVGPOST=0.9989;RSQ=0.9511;ERATE=0.0004;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169141335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169141344 rs3835443 AG A 9003 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1361;AVGPOST=0.9982;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 169141477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169141512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0133;AVGPOST=0.9989;RSQ=0.9625;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169141516 . TA T 139 PASS INDEL;BAVGPOST=0.998;BRSQ=0.817;LDAF=0.0125;AVGPOST=0.9902;RSQ=0.6982;ERATE=0.0011;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169141752 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169141800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4494;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0006;THETA=0.0011;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169141844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4499;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169141878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7246;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169142017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0165;AVGPOST=0.9986;RSQ=0.9708;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 169142036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9311;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169142312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.8283;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169142396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4494;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0007;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169142470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169142514 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0031;AVGPOST=0.9974;RSQ=0.7060;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169142594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0039;AVGPOST=0.9951;RSQ=0.5690;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169142649 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4825;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169142857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4497;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0006;THETA=0.0002;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169142883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6218;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169142910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.782;LDAF=0.0154;AVGPOST=0.9960;RSQ=0.9002;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169142921 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169143194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4497;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0002;THETA=0.0002;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169143322 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169143440 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0041;AVGPOST=0.9978;RSQ=0.7843;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169143602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0084;AVGPOST=0.9990;RSQ=0.9467;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169143733 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7085;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169143787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7132;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169143794 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2560;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0005;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 169143923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4482;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 169144068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7219;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169144074 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169144120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4496;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0005;THETA=0.0014;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169144207 MERGED_DEL_2_6224 ACTGTAACTATTTCACTTTATAAACTTCTAAGTATTTTTTAACTTTTTTTGACTCTTTTGTAATAACACAGCTTAAAACACAAACACATTGTACAGCTGTACAAAAATCTTTTCTTTCTTTACATCATTATTCTATAAGCTTTTTCTATTTTTTAAGTTTTTTTTCTTTTGAAACCTTTCTGTTAAAAAG A . . SV;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9587;ERATE=0.0003;THETA=0.0004;CIEND=-74,79;CIPOS=-96,61;END=169148086;HOMLEN=2;HOMSEQ=CT;SOURCE=BreakDancer_169144196_169148077 GT:DS:GL:BD 0.00457875 0
1 169144266 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0140;AVGPOST=0.9985;RSQ=0.9507;ERATE=0.0004;THETA=0.0028;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169144480 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9496;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169144715 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4471;AVGPOST=0.9968;RSQ=0.9951;ERATE=0.0009;THETA=0.0006;AC=976;AN=2184 GT:DS:GL:BD 0.44688645 0
1 169144843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169144974 . GA G 519 PASS INDEL;BAVGPOST=0.954;BRSQ=0.859;LDAF=0.1608;AVGPOST=0.9706;RSQ=0.9326;ERATE=0.0004;THETA=0.0005;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 169144978 . AAAAT A 17592 PASS INDEL;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.1737;AVGPOST=0.9936;RSQ=0.9850;ERATE=0.0004;THETA=0.0003;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 169144979 rs10593825 AAATAT A 46390 PASS INDEL;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.1736;AVGPOST=0.9941;RSQ=0.9866;ERATE=0.0003;THETA=0.0006;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 169145038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0779;AVGPOST=0.9985;RSQ=0.9911;ERATE=0.0004;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169145079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5465;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169145089 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.8323;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169145094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0043;AVGPOST=0.9981;RSQ=0.8169;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169145185 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169145234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4459;AVGPOST=0.9977;RSQ=0.9965;ERATE=0.0005;THETA=0.0005;AC=975;AN=2184 GT:DS:GL:BD 0.44642857 0
1 169145378 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169145470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169145514 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6890;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169145515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6095;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169145642 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6637;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169145788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5344;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169145831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0229;AVGPOST=0.9986;RSQ=0.9765;ERATE=0.0002;THETA=0.0009;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 169145944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1831;AVGPOST=0.9938;RSQ=0.9885;ERATE=0.0003;THETA=0.0006;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 169145971 . T TTC 20311 PASS INDEL;BAVGPOST=0.981;BRSQ=0.975;LDAF=0.4479;AVGPOST=0.9919;RSQ=0.9886;ERATE=0.0004;THETA=0.0003;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 169145973 rs72512502 C CTCA 24689 PASS INDEL;BAVGPOST=0.975;BRSQ=0.958;LDAF=0.4443;AVGPOST=0.9871;RSQ=0.9826;ERATE=0.0003;THETA=0.0005;AC=974;AN=2184 GT:DS:GL:BD 0.44597068 0
1 169145974 rs72512502 T TCC 27849 PASS INDEL;BAVGPOST=0.976;BRSQ=0.958;LDAF=0.4368;AVGPOST=0.9600;RSQ=0.9456;ERATE=0.0051;THETA=0.0004;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 169145980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0698;AVGPOST=0.9963;RSQ=0.9770;ERATE=0.0004;THETA=0.0002;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 169145992 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0064;AVGPOST=0.9969;RSQ=0.7891;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169146181 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169146410 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9270;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169146435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1717;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0004;THETA=0.0006;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169146556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9365;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169146559 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6802;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169146571 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1718;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169146582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0778;AVGPOST=0.9994;RSQ=0.9961;ERATE=0.0002;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169146604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8699;ERATE=0.0002;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169146842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5736;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169146910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9935;ERATE=0.0002;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169146953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9369;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169146984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7787;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169147061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6068;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169147077 rs59965189 GTTTT G 49363 PASS INDEL;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.4294;AVGPOST=0.9959;RSQ=0.9936;ERATE=0.0010;THETA=0.0002;AC=938;AN=2184 GT:DS:GL:BD 0.42948717 0
1 169147141 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.957;LDAF=0.4254;AVGPOST=0.9859;RSQ=0.9801;ERATE=0.0014;THETA=0.0005;AC=935;AN=2184 GT:DS:GL:BD 0.42811355 0
1 169147143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0211;AVGPOST=0.9978;RSQ=0.9507;ERATE=0.0007;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 169147144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0114;AVGPOST=0.9965;RSQ=0.8565;ERATE=0.0007;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169147208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.868;LDAF=0.4214;AVGPOST=0.9367;RSQ=0.9138;ERATE=0.0031;THETA=0.0004;AC=940;AN=2184 GT:DS:GL:BD 0.43040293 0
1 169147236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.928;BRSQ=0.889;LDAF=0.4149;AVGPOST=0.9402;RSQ=0.9161;ERATE=0.0056;THETA=0.0006;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 169147241 . A AT 257 PASS INDEL;BAVGPOST=0.992;BRSQ=0.708;LDAF=0.0232;AVGPOST=0.9852;RSQ=0.7664;ERATE=0.0007;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 169147243 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.617;LDAF=0.0046;AVGPOST=0.9944;RSQ=0.5408;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169147336 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.954;LDAF=0.1551;AVGPOST=0.9926;RSQ=0.9769;ERATE=0.0007;THETA=0.0009;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 169147373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.4437;AVGPOST=0.9948;RSQ=0.9924;ERATE=0.0011;THETA=0.0004;AC=970;AN=2184 GT:DS:GL:BD 0.44413918 0
1 169147552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9998;RSQ=0.9922;ERATE=0.0002;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169147706 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169147809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.938;LDAF=0.0230;AVGPOST=0.9950;RSQ=0.9197;ERATE=0.0004;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 169147810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9839;ERATE=0.0003;THETA=0.0001;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169147832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169147890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.8020;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169147947 . T TC 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169148216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8883;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169148219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.631;LDAF=0.0061;AVGPOST=0.9932;RSQ=0.5580;ERATE=0.0008;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169148245 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0145;AVGPOST=0.9990;RSQ=0.9685;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169148273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5958;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169148324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7166;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169148383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4365;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 169148419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9996;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169148464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169148512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.728;LDAF=0.0093;AVGPOST=0.9931;RSQ=0.7243;ERATE=0.0005;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169148528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.743;LDAF=0.0063;AVGPOST=0.9985;RSQ=0.8993;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169148595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4494;AVGPOST=0.9921;RSQ=0.9891;ERATE=0.0013;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169148809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0051;AVGPOST=0.9977;RSQ=0.8076;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169148830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169148933 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169148951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4497;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169148975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.7960;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169148977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169149013 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5722;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169149034 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169149115 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4495;AVGPOST=0.9977;RSQ=0.9965;ERATE=0.0006;THETA=0.0065;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169149169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0103;AVGPOST=0.9991;RSQ=0.9691;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169149229 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0002;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169149259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4362;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=952;AN=2184 GT:DS:GL:BD 0.43589744 0
1 169149278 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4492;AVGPOST=0.9977;RSQ=0.9965;ERATE=0.0006;THETA=0.0003;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 169149302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4484;AVGPOST=0.9984;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 169149389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169149920 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0003;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169149927 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8237;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169150023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9823;ERATE=0.0002;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169150029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169150117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=0.9992;RSQ=0.9773;ERATE=0.0002;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169150199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169150253 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1765;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0002;THETA=0.0007;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 169150333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4504;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 169150368 rs72162738 CTATT C 28267 PASS INDEL;BAVGPOST=0.923;BRSQ=0.839;LDAF=0.4056;AVGPOST=0.8886;RSQ=0.8055;ERATE=0.0599;THETA=0.0004;AC=880;AN=2184 GT:DS:GL:BD 0.40293041 0
1 169150408 . C CT 5748 PASS INDEL;BAVGPOST=0.953;BRSQ=0.737;LDAF=0.1273;AVGPOST=0.9190;RSQ=0.6970;ERATE=0.0357;THETA=0.0005;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 169150429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8374;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169150431 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6621;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169150456 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4502;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0007;THETA=0.0004;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 169150534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4487;AVGPOST=0.9968;RSQ=0.9957;ERATE=0.0006;THETA=0.0007;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169150707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9092;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169150781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0213;AVGPOST=0.9990;RSQ=0.9834;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 169150795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169150876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169150887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9885;ERATE=0.0002;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169151225 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169151228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0780;AVGPOST=0.9992;RSQ=0.9955;ERATE=0.0002;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169151463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5369;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169151504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169151622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8537;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169151639 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4501;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 169151696 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169151723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169151759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.906;LDAF=0.0271;AVGPOST=0.9970;RSQ=0.9530;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 169151865 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5692;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169152102 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6626;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169152130 . TA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4689;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169152305 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7348;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169152317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8891;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169152325 . C CT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169152357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0215;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0002;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169152447 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169152455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0141;AVGPOST=0.9983;RSQ=0.9527;ERATE=0.0002;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169152584 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4490;AVGPOST=0.9978;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 169152588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1697;AVGPOST=0.9980;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 169152670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9286;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169152761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8489;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169152814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.896;LDAF=0.0779;AVGPOST=0.9970;RSQ=0.9822;ERATE=0.0004;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169152896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.4189;AVGPOST=0.9660;RSQ=0.9504;ERATE=0.0025;THETA=0.0006;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 169152904 rs67030443 GTGGCAGGCGCC G 8576 PASS INDEL;BAVGPOST=0.971;BRSQ=0.794;LDAF=0.0785;AVGPOST=0.9930;RSQ=0.9611;ERATE=0.0005;THETA=0.0003;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 169152956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1326;AVGPOST=0.9888;RSQ=0.9610;ERATE=0.0010;THETA=0.0008;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 169153019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0134;AVGPOST=0.9993;RSQ=0.9746;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169153026 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0181;AVGPOST=0.9955;RSQ=0.8904;ERATE=0.0009;THETA=0.0033;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 169153049 . G GA 131 PASS INDEL;BAVGPOST=0.975;BRSQ=0.483;LDAF=0.0454;AVGPOST=0.9479;RSQ=0.5240;ERATE=0.0083;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 169153138 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.556;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7924;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169153141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4496;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0005;THETA=0.0007;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169153208 rs35165011 A AT 13379 PASS INDEL;BAVGPOST=0.981;BRSQ=0.958;LDAF=0.1960;AVGPOST=0.9786;RSQ=0.9625;ERATE=0.0019;THETA=0.0003;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 169153211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8728;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169153227 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4467;AVGPOST=0.9911;RSQ=0.9872;ERATE=0.0016;THETA=0.0004;AC=978;AN=2184 GT:DS:GL:BD 0.44780219 0
1 169153270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0043;AVGPOST=0.9977;RSQ=0.7678;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169153460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169153466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0136;AVGPOST=0.9992;RSQ=0.9775;ERATE=0.0002;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169153499 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6329;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169153588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.913;LDAF=0.0180;AVGPOST=0.9970;RSQ=0.9291;ERATE=0.0004;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169153738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0135;AVGPOST=0.9996;RSQ=0.9853;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169153774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1712;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 169153880 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169153947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169154005 . GAC G 16518 PASS INDEL;BAVGPOST=0.989;BRSQ=0.975;LDAF=0.1752;AVGPOST=0.9888;RSQ=0.9789;ERATE=0.0007;THETA=0.0004;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 169154007 rs34215866 CAT C 36806 PASS INDEL;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1789;AVGPOST=0.9957;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 169154124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169154154 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8781;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169154298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9384;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169154328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4495;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0006;THETA=0.0004;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169154449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6510;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169154456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7877;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169154574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2606;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 169154652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9697;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169154692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.9871;AVGPOST=0.9994;RSQ=0.9782;ERATE=0.0003;THETA=0.0005;AC=2156;AN=2184 GT:DS:GL:BD 0.98717946 1
1 169154792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169154856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4500;AVGPOST=0.9988;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169154952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169155032 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5264;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169155043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9993;RSQ=0.9814;ERATE=0.0002;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169155076 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9474;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169155081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169155274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0035;AVGPOST=0.9963;RSQ=0.6187;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169155305 rs62782861 AC A 2888 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0382;AVGPOST=0.9971;RSQ=0.9648;ERATE=0.0004;THETA=0.0004;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 169155451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169155498 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.566;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5638;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169155553 . C CA 126 PASS INDEL;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169155621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4499;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169155756 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1713;AVGPOST=0.9991;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 169155805 . A AT 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169155814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4307;AVGPOST=0.9955;RSQ=0.9939;ERATE=0.0007;THETA=0.0003;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 169156068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9814;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169156335 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169156405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9656;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169156414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7178;AVGPOST=0.9977;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=1568;AN=2184 GT:DS:GL:BD 0.71794873 1
1 169156450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9240;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169156468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169156499 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.869;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9492;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169156595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8732;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169156604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5273;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169156608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.1849;AVGPOST=0.9961;RSQ=0.9926;ERATE=0.0004;THETA=0.0002;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 169156739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7182;AVGPOST=0.9983;RSQ=0.9964;ERATE=0.0005;THETA=0.0002;AC=1570;AN=2184 GT:DS:GL:BD 0.71886444 1
1 169156764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.358;LDAF=0.0050;AVGPOST=0.9958;RSQ=0.7345;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169156802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4370;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169156805 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4492;AVGPOST=0.9948;RSQ=0.9930;ERATE=0.0013;THETA=0.0006;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 169156899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0135;AVGPOST=0.9996;RSQ=0.9853;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169156911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4643;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169156922 . T TG 54 PASS INDEL;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0089;AVGPOST=0.9907;RSQ=0.5833;ERATE=0.0010;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169157033 . CT C 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5214;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169157074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.9012;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169157314 . C CT 110 PASS INDEL;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0022;AVGPOST=0.9969;RSQ=0.5174;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169157353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4501;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0005;THETA=0.0002;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169157390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169157429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6039;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169157546 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.5041;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169157653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169157711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169157914 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0188;AVGPOST=0.9991;RSQ=0.9810;ERATE=0.0002;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 169157919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0718;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 169157930 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.8132;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169158020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4526;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169158035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169158207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7656;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169158376 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9040;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169158547 rs67600092 TAAAAC T 13257 PASS INDEL;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0763;AVGPOST=0.9981;RSQ=0.9897;ERATE=0.0003;THETA=0.0002;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 169158580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4498;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0005;THETA=0.0002;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169158758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6724;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169158869 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6621;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169158904 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.8428;AVGPOST=0.9953;RSQ=0.9861;ERATE=0.0006;THETA=0.0005;AC=1841;AN=2184 GT:DS:GL:BD 0.84294873 1
1 169158980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.1888;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 169159062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9343;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169159107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8476;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169159186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4450;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169159194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0222;AVGPOST=0.9993;RSQ=0.9875;ERATE=0.0002;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 169159384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0082;AVGPOST=0.9968;RSQ=0.8424;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169159402 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2613;AVGPOST=0.9979;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 169159409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6928;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169159619 rs35816758 AAT A 21984 PASS INDEL;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.4493;AVGPOST=0.9935;RSQ=0.9910;ERATE=0.0008;THETA=0.0005;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 169159677 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7714;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169159726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.8669;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169159732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.892;LDAF=0.0132;AVGPOST=0.9983;RSQ=0.9387;ERATE=0.0005;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169159760 rs34764111 C CT 16442 PASS INDEL;BAVGPOST=0.943;BRSQ=0.902;LDAF=0.4491;AVGPOST=0.8625;RSQ=0.7946;ERATE=0.0282;THETA=0.0003;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 169159824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5625;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169159866 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.990;LDAF=0.5304;AVGPOST=0.9965;RSQ=0.9949;ERATE=0.0005;THETA=0.0003;AC=1156;AN=2184 GT:DS:GL:BD 0.52930403 1
1 169159948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169160302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.492;LDAF=0.0316;AVGPOST=0.9657;RSQ=0.5684;ERATE=0.0023;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 169160458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0059;AVGPOST=0.9979;RSQ=0.8813;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169160464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9650;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169160481 . GA G 229 PASS INDEL;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0056;AVGPOST=0.9966;RSQ=0.7681;ERATE=0.0005;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169160532 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4356;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 169160611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9463;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169160652 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4364;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 169160726 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.9173;AVGPOST=0.9967;RSQ=0.9856;ERATE=0.0003;THETA=0.0001;AC=2005;AN=2184 GT:DS:GL:BD 0.91804028 1
1 169160768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6217;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169160781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9132;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169160943 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4492;AVGPOST=0.9980;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 169161016 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169161266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9631;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169161308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9996;RSQ=0.9871;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169161341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0100;AVGPOST=0.9989;RSQ=0.9536;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169161491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8197;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169161515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4498;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0004;THETA=0.0002;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169161609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4507;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0005;THETA=0.0002;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 169161629 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7476;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169161758 . G GACTT 357 PASS INDEL;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9415;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169161780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4492;AVGPOST=0.9982;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169161785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1888;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 169161845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0136;AVGPOST=0.9992;RSQ=0.9820;ERATE=0.0002;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169161858 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0128;AVGPOST=0.9988;RSQ=0.9651;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169161899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0206;AVGPOST=0.9987;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 169161917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4885;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169162004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169162084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2617;AVGPOST=0.9972;RSQ=0.9957;ERATE=0.0006;THETA=0.0005;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 169162146 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9812;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169162177 . AT A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4955;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169162261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8227;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169162386 . AAAT A 52 PASS INDEL;BAVGPOST=0.995;BRSQ=0.681;LDAF=0.0128;AVGPOST=0.9836;RSQ=0.4975;ERATE=0.0035;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169162430 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4365;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0005;THETA=0.0003;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 169162458 . AGT A 4202 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0217;AVGPOST=0.9994;RSQ=0.9879;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169162470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1364;AVGPOST=0.9986;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 169162486 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0162;AVGPOST=0.9986;RSQ=0.9735;ERATE=0.0002;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 169162505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9308;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169162578 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4494;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169162593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169162603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4497;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0004;THETA=0.0002;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169162698 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6078;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169162708 . TG T 320 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7400;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169162770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6971;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169162852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169162862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4491;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=980;AN=2184 GT:DS:GL:BD 0.44871795 0
1 169162997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0121;AVGPOST=0.9987;RSQ=0.9579;ERATE=0.0002;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169163017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0777;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0002;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169163045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.9141;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169163208 . TAAAAAGA T 830 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9347;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169163221 . G GA 1471 PASS INDEL;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0138;AVGPOST=0.9987;RSQ=0.9600;ERATE=0.0005;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169163243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4368;AVGPOST=0.9964;RSQ=0.9949;ERATE=0.0008;THETA=0.0004;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 169163277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169163410 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9995;RSQ=0.9801;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169163658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169163718 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169163785 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169163866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169163900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8894;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169163918 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169163931 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169164005 . AAG A 209 PASS INDEL;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6550;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169164052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7178;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169164057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4498;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169164085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169164138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4497;AVGPOST=0.9988;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169164164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169164180 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1691;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 169164270 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6288;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169164307 rs34332810 AT A 46293 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4359;AVGPOST=0.9974;RSQ=0.9959;ERATE=0.0006;THETA=0.0004;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 169164326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9982;RSQ=0.9692;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169164358 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4497;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169164450 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8526;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169164504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1367;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 169164541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.453;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5448;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169164621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169164887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5419;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169164918 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9799;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169165104 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0112;AVGPOST=0.9986;RSQ=0.9585;ERATE=0.0002;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169165117 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0064;AVGPOST=0.9978;RSQ=0.8864;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169165125 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169165135 rs35658009 AG A 48085 PASS INDEL;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.4339;AVGPOST=0.9962;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 169165148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169165266 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1713;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0015;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 169165340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7866;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169165348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7665;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169165423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169165493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0812;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 169165516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1348;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 169165558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169165713 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5335;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169165787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169165787 . GGTAA G 903 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8230;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169165848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169165888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169165948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0057;AVGPOST=0.9970;RSQ=0.8353;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169166041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9829;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169166052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169166058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0036;AVGPOST=0.9964;RSQ=0.6359;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169166272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8390;ERATE=0.0002;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169166371 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0091;AVGPOST=0.9975;RSQ=0.8807;ERATE=0.0005;THETA=0.0001;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169166504 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4406;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169166631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.4370;AVGPOST=0.9964;RSQ=0.9947;ERATE=0.0007;THETA=0.0005;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 169166645 rs35867722 CTG C 30599 PASS INDEL;BAVGPOST=0.980;BRSQ=0.966;LDAF=0.4586;AVGPOST=0.9439;RSQ=0.9230;ERATE=0.0168;THETA=0.0006;AC=992;AN=2184 GT:DS:GL:BD 0.45421246 0
1 169166699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4682;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169166727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4493;AVGPOST=0.9967;RSQ=0.9955;ERATE=0.0005;THETA=0.0008;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 169166772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.1814;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 169166774 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9270;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169166910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5825;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169166913 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8737;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169166925 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0138;AVGPOST=0.9988;RSQ=0.9657;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169166980 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6992;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169167106 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6698;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169167328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169167347 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169167449 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4494;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169167483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169167502 . AT A 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6288;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169167541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169167591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4516;AVGPOST=0.9957;RSQ=0.9939;ERATE=0.0009;THETA=0.0002;AC=986;AN=2184 GT:DS:GL:BD 0.45146519 0
1 169167627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0218;AVGPOST=0.9994;RSQ=0.9890;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169167665 . GT G 2284 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169167675 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1583;AVGPOST=0.9991;RSQ=0.9973;ERATE=0.0003;THETA=0.0009;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 169167729 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8376;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169167744 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8904;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169167911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.8978;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169168072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169168080 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169168114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5905;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169168255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7011;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169168272 . CTAA C 14 PASS INDEL;BAVGPOST=0.998;BRSQ=0.663;LDAF=0.0088;AVGPOST=0.9893;RSQ=0.5147;ERATE=0.0024;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169168354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169168466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8663;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169168503 . GT G 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7411;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169168578 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169168638 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7294;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169168684 rs66547877 CTTT C 16599 PASS INDEL;BAVGPOST=0.959;BRSQ=0.934;LDAF=0.4957;AVGPOST=0.8683;RSQ=0.8103;ERATE=0.0267;THETA=0.0006;AC=1053;AN=2184 GT:DS:GL:BD 0.48214287 0
1 169168804 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0787;AVGPOST=0.9973;RSQ=0.9839;ERATE=0.0006;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169168819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7757;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169169001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0623;AVGPOST=0.9973;RSQ=0.9819;ERATE=0.0002;THETA=0.0003;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 169169129 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7294;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169169253 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9822;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169169365 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4374;AVGPOST=0.9982;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=956;AN=2184 GT:DS:GL:BD 0.43772894 0
1 169169410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0031;AVGPOST=0.9946;RSQ=0.2604;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169169441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169169485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4366;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0005;THETA=0.0004;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 169169486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169169635 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4496;AVGPOST=0.9976;RSQ=0.9964;ERATE=0.0006;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169169636 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169169695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9364;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169169758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5169;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169169856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1350;AVGPOST=0.9986;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 169169924 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0719;AVGPOST=0.9993;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 169169940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0002;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169170031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7185;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=1571;AN=2184 GT:DS:GL:BD 0.71932232 1
1 169170055 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6666;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169170081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169170085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5715;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169170252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4362;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 169170275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0054;AVGPOST=0.9975;RSQ=0.8222;ERATE=0.0005;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169170286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0086;AVGPOST=0.9971;RSQ=0.8901;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169170334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9406;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169170456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0167;AVGPOST=0.9984;RSQ=0.9639;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 169170507 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169170511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7329;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169170582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7048;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0005;THETA=0.0004;AC=1540;AN=2184 GT:DS:GL:BD 0.70512819 1
1 169170683 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4500;AVGPOST=0.9970;RSQ=0.9955;ERATE=0.0007;THETA=0.0002;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 169170745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6683;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169170818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0002;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169170843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9888;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169170869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9561;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169171034 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9540;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169171189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169171399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169171481 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4577;AVGPOST=0.9945;RSQ=0.9921;ERATE=0.0021;THETA=0.0004;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 169171537 rs66730963 C CT 34518 PASS INDEL;BAVGPOST=0.983;BRSQ=0.961;LDAF=0.2892;AVGPOST=0.9765;RSQ=0.9578;ERATE=0.0075;THETA=0.0003;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 169171623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9810;ERATE=0.0002;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169171735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7365;ERATE=0.0002;THETA=0.0069;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169171936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169172153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0035;AVGPOST=0.9996;RSQ=0.9562;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169172197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8047;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169172290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3056;AVGPOST=0.9981;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 169172316 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6836;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169172379 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4675;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169172426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0077;AVGPOST=0.9987;RSQ=0.9293;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169172529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169172543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169172590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0218;AVGPOST=0.9995;RSQ=0.9894;ERATE=0.0003;THETA=0.0040;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169172644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169172873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0777;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0011;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169172971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.5274;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169172989 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5664;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169173191 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5118;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169173267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7162;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0003;THETA=0.0008;AC=1565;AN=2184 GT:DS:GL:BD 0.71657509 1
1 169173294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6787;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169173497 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0667;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 169173511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169173646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.8122;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169173674 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0087;AVGPOST=0.9997;RSQ=0.9865;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169173764 . A ATT 135 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5540;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169173787 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2037;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0002;THETA=0.0005;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 169173866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169173996 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7797;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169174036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2035;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 169174114 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0218;AVGPOST=0.9993;RSQ=0.9868;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169174152 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8615;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169174418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9073;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169174452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9397;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169174737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8673;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169174756 . AT A 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7297;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169174779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169174789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169174793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6188;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169174825 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7132;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169174881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7769;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169174967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0782;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 169174980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2158;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169175066 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169175070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169175072 . TC T 5348 PASS INDEL;BAVGPOST=0.991;BRSQ=0.883;LDAF=0.0335;AVGPOST=0.9986;RSQ=0.9822;ERATE=0.0003;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 169175086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6074;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169175196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2075;AVGPOST=0.9953;RSQ=0.9917;ERATE=0.0005;THETA=0.0004;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 169175200 . T TC 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5211;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169175205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9724;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169175313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7964;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169175353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2521;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 169175403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169175448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0002;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169175465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1724;AVGPOST=0.9980;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169175481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4687;AVGPOST=0.9978;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=1024;AN=2184 GT:DS:GL:BD 0.46886447 0
1 169175517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7029;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169175573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8418;ERATE=0.0003;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169175658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0094;AVGPOST=0.9993;RSQ=0.9719;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169175922 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2160;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169175940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6127;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169175995 rs59442855 CTT C 56113 PASS INDEL;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.4763;AVGPOST=0.9872;RSQ=0.9829;ERATE=0.0027;THETA=0.0004;AC=1043;AN=2184 GT:DS:GL:BD 0.47756410 0
1 169176109 rs72514405 A ACT 31843 PASS INDEL;BAVGPOST=0.977;BRSQ=0.966;LDAF=0.4642;AVGPOST=0.9822;RSQ=0.9762;ERATE=0.0027;THETA=0.0003;AC=1018;AN=2184 GT:DS:GL:BD 0.46611720 0
1 169176110 rs35469833 C CTT 66306 PASS INDEL;BAVGPOST=0.977;BRSQ=0.965;LDAF=0.4645;AVGPOST=0.9928;RSQ=0.9897;ERATE=0.0007;THETA=0.0003;AC=1018;AN=2184 GT:DS:GL:BD 0.46611720 0
1 169176139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.779;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7929;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169176141 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169176247 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0067;AVGPOST=0.9982;RSQ=0.9002;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169176266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0613;AVGPOST=0.9991;RSQ=0.9933;ERATE=0.0003;THETA=0.0006;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 169176267 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1718;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169176314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5153;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169176397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2037;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0002;THETA=0.0071;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 169176469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2957;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0003;THETA=0.0002;AC=647;AN=2184 GT:DS:GL:BD 0.29624543 0
1 169176548 . GCC G 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169176590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5489;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0004;THETA=0.0004;AC=1199;AN=2184 GT:DS:GL:BD 0.54899269 1
1 169176619 . T TG 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169176650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0077;AVGPOST=0.9990;RSQ=0.9501;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169176675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6926;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169176732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0636;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0003;THETA=0.0001;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 169176777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4672;AVGPOST=0.9980;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169176788 . GA G 28 PASS INDEL;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5953;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169176789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7779;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169176799 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169176832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169176899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0667;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 169176971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7224;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169177019 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2157;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0002;THETA=0.0003;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169177028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0816;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 169177029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169177056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4693;AVGPOST=0.9976;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=1024;AN=2184 GT:DS:GL:BD 0.46886447 0
1 169177479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169177602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169177651 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169177884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169178310 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2162;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 169178337 . A AT 4780 PASS INDEL;BAVGPOST=0.971;BRSQ=0.934;LDAF=0.2064;AVGPOST=0.9514;RSQ=0.9129;ERATE=0.0039;THETA=0.0002;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 169178339 rs5778607 T TA 26792 PASS INDEL;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2093;AVGPOST=0.9975;RSQ=0.9954;ERATE=0.0006;THETA=0.0005;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 169178478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0006;AVGPOST=0.9988;RSQ=0.3368;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169178520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5590;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169178555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6070;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169178572 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2164;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 169178578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169178608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1727;AVGPOST=0.9979;RSQ=0.9941;ERATE=0.0006;THETA=0.0003;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169178646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5954;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169178824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6332;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169178889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2523;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 169178916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2522;AVGPOST=0.9985;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 169178943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2156;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169179050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4675;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169179111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7040;AVGPOST=0.9972;RSQ=0.9948;ERATE=0.0006;THETA=0.0004;AC=1539;AN=2184 GT:DS:GL:BD 0.70467031 1
1 169179134 . CA C 95 PASS INDEL;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7421;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169179462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0087;AVGPOST=0.9990;RSQ=0.9565;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169179469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7158;AVGPOST=0.9965;RSQ=0.9933;ERATE=0.0005;THETA=0.0003;AC=1566;AN=2184 GT:DS:GL:BD 0.71703297 1
1 169179510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9502;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169179517 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169179545 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169179618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9540;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169179634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0803;AVGPOST=0.9966;RSQ=0.9837;ERATE=0.0003;THETA=0.0003;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169179721 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169179807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0780;AVGPOST=0.9991;RSQ=0.9948;ERATE=0.0004;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169179938 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6802;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169179943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4676;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169179964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2154;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169179967 rs71573041 GA G 24069 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2167;AVGPOST=0.9970;RSQ=0.9949;ERATE=0.0007;THETA=0.0003;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 169180012 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169180068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2161;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169180108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.777;LDAF=0.0051;AVGPOST=0.9966;RSQ=0.7338;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169180223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8344;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169180302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2517;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 169180309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169180546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9345;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169180694 . A AT 21 PASS INDEL;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4092;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169180821 . CAT C 70 PASS INDEL;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0031;AVGPOST=0.9967;RSQ=0.5612;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169180857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5493;AVGPOST=0.9934;RSQ=0.9916;ERATE=0.0009;THETA=0.0005;AC=1199;AN=2184 GT:DS:GL:BD 0.54899269 1
1 169180898 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0803;AVGPOST=0.9994;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169180927 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2002;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 169181009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9060;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169181096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0085;AVGPOST=0.9976;RSQ=0.8831;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169181127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.9017;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169181193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.707;LDAF=0.0082;AVGPOST=0.9927;RSQ=0.6428;ERATE=0.0007;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169181390 . CCT C 22 PASS INDEL;BAVGPOST=0.995;BRSQ=0.797;LDAF=0.0131;AVGPOST=0.9944;RSQ=0.8298;ERATE=0.0005;THETA=0.0027;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169181391 . CTCT C 1521 PASS INDEL;BAVGPOST=0.997;BRSQ=0.924;LDAF=0.0186;AVGPOST=0.9980;RSQ=0.9556;ERATE=0.0005;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 169181537 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5631;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169181553 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4657;AVGPOST=0.9970;RSQ=0.9956;ERATE=0.0006;THETA=0.0007;AC=1019;AN=2184 GT:DS:GL:BD 0.46657509 0
1 169181557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6390;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169181609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4697;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169181623 . AT A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6129;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169181732 rs111849369 TC T 18258 PASS INDEL;BAVGPOST=0.989;BRSQ=0.967;LDAF=0.1720;AVGPOST=0.9968;RSQ=0.9911;ERATE=0.0009;THETA=0.0005;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169181763 rs76756070 AATGAGG A 25751 PASS INDEL;BAVGPOST=0.978;BRSQ=0.930;LDAF=0.1670;AVGPOST=0.9887;RSQ=0.9727;ERATE=0.0008;THETA=0.0011;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 169181772 . G GT 11806 PASS INDEL;BAVGPOST=0.975;BRSQ=0.921;LDAF=0.1664;AVGPOST=0.9894;RSQ=0.9745;ERATE=0.0007;THETA=0.0007;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 169181912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4678;AVGPOST=0.9983;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169181967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6160;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169182068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2517;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 169182149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1181;AVGPOST=0.9987;RSQ=0.9944;ERATE=0.0004;THETA=0.0006;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 169182200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169182209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169182215 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5369;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169182295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169182296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169182460 . T TA 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169182469 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4675;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0005;THETA=0.0003;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169182493 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8688;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169182537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0092;AVGPOST=0.9979;RSQ=0.9008;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169182548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169182557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169182569 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4671;AVGPOST=0.9985;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169182694 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5810;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169182703 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5934;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169182779 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0807;AVGPOST=0.9989;RSQ=0.9935;ERATE=0.0004;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 169182940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9054;ERATE=0.0004;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169183033 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0059;AVGPOST=0.9952;RSQ=0.6929;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169183045 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.981;LDAF=0.4638;AVGPOST=0.9920;RSQ=0.9886;ERATE=0.0009;THETA=0.0004;AC=1014;AN=2184 GT:DS:GL:BD 0.46428570 0
1 169183068 rs113770115 A AAT 13284 PASS INDEL;BAVGPOST=0.970;BRSQ=0.908;LDAF=0.1893;AVGPOST=0.9270;RSQ=0.8306;ERATE=0.0090;THETA=0.0002;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 169183072 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0795;AVGPOST=0.9962;RSQ=0.9794;ERATE=0.0007;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169183082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.455;LDAF=0.0116;AVGPOST=0.9862;RSQ=0.5299;ERATE=0.0025;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169183090 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4669;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0005;THETA=0.0002;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169183148 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169183257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0802;AVGPOST=0.9989;RSQ=0.9937;ERATE=0.0003;THETA=0.0002;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169183290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2157;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169183348 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0105;AVGPOST=0.9995;RSQ=0.9827;ERATE=0.0002;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169183385 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2426;AVGPOST=0.9973;RSQ=0.9946;ERATE=0.0004;THETA=0.0001;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 169183442 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169183496 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0108;AVGPOST=0.9978;RSQ=0.9319;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169183500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0051;AVGPOST=0.9993;RSQ=0.9572;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169183536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1168;AVGPOST=0.9986;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 169183543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169183588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0801;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169183823 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0002;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169183853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9004;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169183962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169184095 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9888;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169184190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0063;AVGPOST=0.9991;RSQ=0.9361;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169184413 . TCC T 1550 PASS INDEL;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0132;AVGPOST=0.9974;RSQ=0.9265;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169184424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4989;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169184446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8116;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169184485 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9771;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169184493 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169184590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0053;AVGPOST=0.9991;RSQ=0.9288;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169184598 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0778;AVGPOST=0.9994;RSQ=0.9961;ERATE=0.0003;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169184748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5949;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169184758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9996;RSQ=0.9871;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169184829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2157;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0004;THETA=0.0007;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169184952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7491;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169185182 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169185432 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4679;AVGPOST=0.9991;RSQ=0.9989;ERATE=0.0002;THETA=0.0006;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169185481 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.8990;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169185536 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2519;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0005;THETA=0.0004;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 169185614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4674;AVGPOST=0.9985;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169185657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9995;RSQ=0.9663;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169185678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169185731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169185887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2141;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 169185944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8651;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169186053 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6530;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169186067 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169186081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8686;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169186120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4704;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169186127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0678;AVGPOST=0.9989;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 169186140 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4564;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169186179 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8170;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169186322 . TGTC T 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4190;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169186327 . ATT A 275 PASS INDEL;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0038;AVGPOST=0.9961;RSQ=0.5891;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169186344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9981;RSQ=0.8624;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169186590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.5167;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169186667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.516;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4191;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169186802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8260;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169186862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169186984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9486;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169187032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169187033 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0035;AVGPOST=0.9978;RSQ=0.7560;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169187038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169187090 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7644;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169187111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9724;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169187469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169187550 . A AC 2279 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0129;AVGPOST=0.9992;RSQ=0.9701;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169187607 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169187694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5996;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169187732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0213;AVGPOST=0.9995;RSQ=0.9904;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 169187737 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4607;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169187791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8297;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169187850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6435;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169187921 . T TA 89 PASS INDEL;BAVGPOST=0.996;BRSQ=0.681;LDAF=0.0125;AVGPOST=0.9902;RSQ=0.6995;ERATE=0.0010;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169188092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8790;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169188110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7144;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169188153 . CT C 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8455;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169188186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169188320 . CCTT C 358 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8497;ERATE=0.0002;THETA=0.0023;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169188329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6384;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169188422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169188486 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1718;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0004;THETA=0.0001;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169188624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0156;AVGPOST=0.9996;RSQ=0.9885;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169188653 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169188662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2158;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169188693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9863;ERATE=0.0002;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169188694 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4676;AVGPOST=0.9977;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=1020;AN=2184 GT:DS:GL:BD 0.46703297 0
1 169188714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4485;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169188800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9583;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169188803 rs5778608 C CTTA 62654 PASS INDEL;BAVGPOST=0.986;BRSQ=0.981;LDAF=0.4619;AVGPOST=0.9880;RSQ=0.9854;ERATE=0.0004;THETA=0.0004;AC=1011;AN=2184 GT:DS:GL:BD 0.46291208 0
1 169188805 . T TATG 25315 PASS INDEL;BAVGPOST=0.962;BRSQ=0.937;LDAF=0.4362;AVGPOST=0.9717;RSQ=0.9631;ERATE=0.0005;THETA=0.0003;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 169188806 . A AT 7766 PASS INDEL;BAVGPOST=0.925;BRSQ=0.866;LDAF=0.3664;AVGPOST=0.9189;RSQ=0.8741;ERATE=0.0101;THETA=0.0004;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 169188810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0062;AVGPOST=0.9975;RSQ=0.8620;ERATE=0.0003;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169188861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0613;AVGPOST=0.9987;RSQ=0.9911;ERATE=0.0002;THETA=0.0006;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 169188958 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0668;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 169188977 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169189049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169189091 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4676;AVGPOST=0.9988;RSQ=0.9982;ERATE=0.0004;THETA=0.0005;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169189104 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169189141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2040;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 169189160 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0002;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169189262 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169189386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4679;AVGPOST=0.9982;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=1022;AN=2184 GT:DS:GL:BD 0.46794870 0
1 169189422 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0636;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 169189463 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0777;AVGPOST=0.9991;RSQ=0.9945;ERATE=0.0003;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169189477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2160;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169189586 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1715;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0006;THETA=0.0005;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 169189591 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.868;LDAF=0.0173;AVGPOST=0.9944;RSQ=0.8783;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169189710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5637;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169189736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0778;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169189768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5281;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169189771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2158;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0004;THETA=0.0005;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169189810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169189878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2159;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0004;THETA=0.0006;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169189983 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169189987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2168;AVGPOST=0.9967;RSQ=0.9941;ERATE=0.0005;THETA=0.0003;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 169190007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5326;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169190038 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169190213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2521;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0005;THETA=0.0002;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 169190229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0779;AVGPOST=0.9992;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169190256 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0093;AVGPOST=0.9994;RSQ=0.9698;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169190401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0667;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 169190450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1718;AVGPOST=0.9993;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169190572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4676;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0006;THETA=0.0004;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169190606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2152;AVGPOST=0.9985;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 169190655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4676;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169190956 . CAT C 983 PASS INDEL;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0094;AVGPOST=0.9992;RSQ=0.9641;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169191057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.859;LDAF=0.0086;AVGPOST=0.9978;RSQ=0.9039;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169191060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2164;AVGPOST=0.9959;RSQ=0.9935;ERATE=0.0004;THETA=0.0005;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169191159 . TTTTG T 6612 PASS INDEL;BAVGPOST=0.987;BRSQ=0.861;LDAF=0.0454;AVGPOST=0.9866;RSQ=0.8848;ERATE=0.0016;THETA=0.0012;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 169191199 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2520;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 169191231 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4674;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0002;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169191362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169191468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1697;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 169191505 . ATC A 154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0038;AVGPOST=0.9982;RSQ=0.8410;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169191557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0086;AVGPOST=0.9962;RSQ=0.8277;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169191607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169191681 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169191742 . G GA 86 PASS INDEL;BAVGPOST=0.991;BRSQ=0.607;LDAF=0.0134;AVGPOST=0.9863;RSQ=0.6223;ERATE=0.0021;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169191749 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0795;AVGPOST=0.9989;RSQ=0.9938;ERATE=0.0004;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169191860 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7170;AVGPOST=0.9975;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=1567;AN=2184 GT:DS:GL:BD 0.71749085 1
1 169191863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5747;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169191873 . C CAG 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.3550;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169191945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0801;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169192018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169192068 . T TA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5079;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169192075 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.843;LDAF=0.0149;AVGPOST=0.9931;RSQ=0.8177;ERATE=0.0011;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169192110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4670;AVGPOST=0.9971;RSQ=0.9962;ERATE=0.0006;THETA=0.0006;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169192278 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2156;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0004;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169192292 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169192378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0136;AVGPOST=0.9994;RSQ=0.9806;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169192395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7320;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169192399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4719;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169192431 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2159;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0005;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169192549 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0059;AVGPOST=0.9983;RSQ=0.8972;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169192599 . TTTAA T 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8903;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169192755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5546;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169192760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1708;AVGPOST=0.9972;RSQ=0.9934;ERATE=0.0004;THETA=0.0004;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 169192775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0089;AVGPOST=0.9991;RSQ=0.9613;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169192817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0098;AVGPOST=0.9986;RSQ=0.9405;ERATE=0.0002;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169192820 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9671;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169192859 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.761;LDAF=0.0047;AVGPOST=0.9977;RSQ=0.8198;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169193087 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2151;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 169193268 . CAT C 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6151;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169193271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0098;AVGPOST=0.9974;RSQ=0.9133;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169193358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7917;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169193519 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9152;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169193553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2523;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 169193571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6829;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169193712 . G GT 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169193742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4688;AVGPOST=0.9964;RSQ=0.9953;ERATE=0.0005;THETA=0.0006;AC=1025;AN=2184 GT:DS:GL:BD 0.46932235 0
1 169193763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0673;AVGPOST=0.9984;RSQ=0.9882;ERATE=0.0006;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 169193765 . T TAC 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4387;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169193826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4916;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169193838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6247;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169194147 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0806;AVGPOST=0.9989;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 169194186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169194246 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169194503 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4635;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169194554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0036;AVGPOST=0.9975;RSQ=0.7354;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169194640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.986;LDAF=0.4959;AVGPOST=0.9914;RSQ=0.9883;ERATE=0.0010;THETA=0.0017;AC=1080;AN=2184 GT:DS:GL:BD 0.49450549 0
1 169194641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6772;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169194651 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169194971 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4607;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169194972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169195000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6613;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169195074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7078;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169195078 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0040;AVGPOST=0.9971;RSQ=0.7314;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169195116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6230;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169195155 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1721;AVGPOST=0.9985;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169195168 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1183;AVGPOST=0.9971;RSQ=0.9883;ERATE=0.0003;THETA=0.0004;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 169195199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.9033;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169195313 . TG T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3895;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169195805 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169195839 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169195864 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9062;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169195899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9622;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169195994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2160;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0022;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169196061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6772;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169196062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169196082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.9031;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169196107 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169196259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5694;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169196272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0773;AVGPOST=0.9989;RSQ=0.9938;ERATE=0.0003;THETA=0.0009;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169196306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169196309 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169196314 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.7039;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169196357 . G GA 50 PASS INDEL;BAVGPOST=0.996;BRSQ=0.664;LDAF=0.0080;AVGPOST=0.9910;RSQ=0.5605;ERATE=0.0014;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169196368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.622;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169196395 . CTCT C 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6684;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169196397 . CTTCT C 270 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169196411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9771;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169196469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169196494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7330;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169196504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7244;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169196532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169196627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9903;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169196696 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9588;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169196758 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5450;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169196934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8345;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169196946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169197026 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6904;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169197077 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7082;ERATE=0.0004;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169197115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.900;LDAF=0.0405;AVGPOST=0.9930;RSQ=0.9319;ERATE=0.0005;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 169197198 . CTTATA C 76 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6082;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169197224 rs35983758 AAT A 20362 PASS INDEL;BAVGPOST=0.983;BRSQ=0.967;LDAF=0.2447;AVGPOST=0.9270;RSQ=0.8871;ERATE=0.0122;THETA=0.0004;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 169197260 . AT A 74 PASS INDEL;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0021;AVGPOST=0.9966;RSQ=0.3408;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169197433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4672;AVGPOST=0.9976;RSQ=0.9963;ERATE=0.0005;THETA=0.0004;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169197743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.707;LDAF=0.0401;AVGPOST=0.9704;RSQ=0.6882;ERATE=0.0018;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 169197884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0809;AVGPOST=0.9937;RSQ=0.9661;ERATE=0.0007;THETA=0.0004;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 169198197 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0160;AVGPOST=0.9990;RSQ=0.9742;ERATE=0.0004;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169198239 . CTCTT C 48 PASS INDEL;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0026;AVGPOST=0.9971;RSQ=0.5130;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169198257 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169198558 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.8001;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169198562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169198691 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9390;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169199017 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4723;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169199069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.744;LDAF=0.0068;AVGPOST=0.9942;RSQ=0.7022;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169199172 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5611;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169199183 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1719;AVGPOST=0.9987;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169199205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.709;LDAF=0.0073;AVGPOST=0.9950;RSQ=0.7207;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169199312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7233;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169199331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4676;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0005;THETA=0.0007;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169199386 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5490;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169199425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4679;AVGPOST=0.9968;RSQ=0.9952;ERATE=0.0007;THETA=0.0003;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169199427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169199437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169199558 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0133;AVGPOST=0.9993;RSQ=0.9793;ERATE=0.0002;THETA=0.0014;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169199559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169199627 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169199644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169199680 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9526;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169199687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2157;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169199766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169199788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0139;AVGPOST=0.9993;RSQ=0.9816;ERATE=0.0002;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169199927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169199982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169200014 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169200068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8154;ERATE=0.0002;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169200111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4676;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0002;THETA=0.0004;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169200249 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0778;AVGPOST=0.9993;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169200292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169200389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4858;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169200417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169200462 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2157;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169200510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1180;AVGPOST=0.9989;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 169200540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2174;AVGPOST=0.9963;RSQ=0.9952;ERATE=0.0003;THETA=0.0008;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 169200600 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1718;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0002;THETA=0.0003;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169200670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1697;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0004;THETA=0.0008;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 169200826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7745;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169200872 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1718;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169200888 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169200995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7513;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169200999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7696;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169201021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5981;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169201027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0096;AVGPOST=0.9977;RSQ=0.9100;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169201091 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0061;AVGPOST=0.9981;RSQ=0.8643;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169201097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169201157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2157;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0005;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169201283 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169201386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9802;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169201567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1721;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169201579 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9013;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169201602 rs3060535 GAAGAA G 28734 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2144;AVGPOST=0.9956;RSQ=0.9918;ERATE=0.0005;THETA=0.0003;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169201728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7036;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=1538;AN=2184 GT:DS:GL:BD 0.70421243 1
1 169201738 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4670;AVGPOST=0.9981;RSQ=0.9973;ERATE=0.0004;THETA=0.0006;AC=1020;AN=2184 GT:DS:GL:BD 0.46703297 0
1 169201788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0135;AVGPOST=0.9992;RSQ=0.9737;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169201789 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3094;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169201797 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0785;AVGPOST=0.9983;RSQ=0.9910;ERATE=0.0004;THETA=0.0004;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 169201845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.722;LDAF=0.0123;AVGPOST=0.9942;RSQ=0.8089;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169201933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4664;AVGPOST=0.9958;RSQ=0.9944;ERATE=0.0007;THETA=0.0007;AC=1018;AN=2184 GT:DS:GL:BD 0.46611720 0
1 169202364 rs5778609 G GC 76858 PASS INDEL;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.7010;AVGPOST=0.9844;RSQ=0.9750;ERATE=0.0025;THETA=0.0003;AC=1533;AN=2184 GT:DS:GL:BD 0.70192307 1
1 169202523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9884;ERATE=0.0003;THETA=0.0087;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169202668 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0215;AVGPOST=0.9988;RSQ=0.9788;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 169202681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1730;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 169202684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1703;AVGPOST=0.9980;RSQ=0.9954;ERATE=0.0002;THETA=0.0004;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 169202685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6610;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169202731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0803;AVGPOST=0.9983;RSQ=0.9917;ERATE=0.0004;THETA=0.0005;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169202763 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8941;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169202779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169202942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6765;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169202975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0085;AVGPOST=0.9983;RSQ=0.9183;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169203032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4682;AVGPOST=0.9964;RSQ=0.9949;ERATE=0.0008;THETA=0.0003;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169203090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2146;AVGPOST=0.9976;RSQ=0.9963;ERATE=0.0003;THETA=0.0007;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 169203155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0112;AVGPOST=0.9966;RSQ=0.8965;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169203168 . GTTTC G 281 PASS INDEL;BAVGPOST=0.988;BRSQ=0.575;LDAF=0.0160;AVGPOST=0.9859;RSQ=0.6723;ERATE=0.0010;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169203177 . TTTC T 2325 PASS INDEL;BAVGPOST=0.989;BRSQ=0.921;LDAF=0.0811;AVGPOST=0.9960;RSQ=0.9789;ERATE=0.0005;THETA=0.0027;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 169203180 . CTTCT C 2233 PASS INDEL;BAVGPOST=0.988;BRSQ=0.917;LDAF=0.0813;AVGPOST=0.9959;RSQ=0.9754;ERATE=0.0007;THETA=0.0004;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 169203415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2156;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169203544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5487;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169203572 . TTA T 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4306;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169203619 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0074;AVGPOST=0.9994;RSQ=0.9641;ERATE=0.0002;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169203684 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5828;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169203693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4678;AVGPOST=0.9985;RSQ=0.9978;ERATE=0.0005;THETA=0.0006;AC=1022;AN=2184 GT:DS:GL:BD 0.46794870 0
1 169203737 . AAAC A 106 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5040;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169203800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0053;AVGPOST=0.9982;RSQ=0.8815;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169203844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169203846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6842;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169204007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5887;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169204094 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169204219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1179;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0002;THETA=0.0004;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 169204336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169204378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169204429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169204554 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169204640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4678;AVGPOST=0.9991;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=1022;AN=2184 GT:DS:GL:BD 0.46794870 0
1 169204644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0022;AVGPOST=0.9998;RSQ=0.9570;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169204834 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169204848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.9040;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169204894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169204921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9627;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169205144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169205179 . A AT 581 PASS INDEL;BAVGPOST=0.921;BRSQ=0.719;LDAF=0.1439;AVGPOST=0.8951;RSQ=0.6930;ERATE=0.0052;THETA=0.0003;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169205187 rs34255929 T TA 30461 PASS INDEL;BAVGPOST=0.972;BRSQ=0.332;LDAF=0.9405;AVGPOST=0.9151;RSQ=0.4129;ERATE=0.0098;THETA=0.0007;AC=2108;AN=2184 GT:DS:GL:BD 0.96520144 1
1 169205208 rs72563021 CCA C 34059 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2076;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 169205259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8886;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169205331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169205394 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169205582 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0073;AVGPOST=0.9998;RSQ=0.9853;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169205610 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0045;AVGPOST=0.9998;RSQ=0.9822;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169205702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4681;AVGPOST=0.9983;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=1022;AN=2184 GT:DS:GL:BD 0.46794870 0
1 169205870 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0777;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169205919 . A AT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169205936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6439;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169206047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5554;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169206237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2157;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0002;THETA=0.0003;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169206238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169206304 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.920;LDAF=0.0181;AVGPOST=0.9964;RSQ=0.9126;ERATE=0.0004;THETA=0.0044;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 169206356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4864;ERATE=0.0009;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169206388 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0094;AVGPOST=0.9976;RSQ=0.8932;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169206390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0049;AVGPOST=0.9987;RSQ=0.8889;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169206395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169206436 . GC G 494 PASS INDEL;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0051;AVGPOST=0.9958;RSQ=0.6607;ERATE=0.0006;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169206486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4946;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169206519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169206527 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9210;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169206650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8724;ERATE=0.0003;THETA=0.0066;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169206683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9396;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169206707 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9884;ERATE=0.0002;THETA=0.0016;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169206744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2080;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0003;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 169206811 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169206826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169206892 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169206991 . C CA 1899 PASS INDEL;BAVGPOST=0.618;BRSQ=0.314;LDAF=0.2383;AVGPOST=0.8254;RSQ=0.6652;ERATE=0.0075;THETA=0.0012;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 169206994 rs35686505 A AT 23251 PASS INDEL;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.2031;AVGPOST=0.9915;RSQ=0.9850;ERATE=0.0005;THETA=0.0004;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 169206996 . T TA 1821 PASS INDEL;BAVGPOST=0.646;BRSQ=0.340;LDAF=0.2831;AVGPOST=0.7948;RSQ=0.6368;ERATE=0.0058;THETA=0.0003;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 169206999 . T TA 1734 PASS INDEL;BAVGPOST=0.657;BRSQ=0.326;LDAF=0.2139;AVGPOST=0.8715;RSQ=0.7584;ERATE=0.0048;THETA=0.0003;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 169207075 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169207085 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169207094 . CT C 1294 PASS INDEL;BAVGPOST=0.994;BRSQ=0.800;LDAF=0.0132;AVGPOST=0.9947;RSQ=0.8410;ERATE=0.0005;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169207162 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0780;AVGPOST=0.9994;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169207256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.9052;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169207332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0137;AVGPOST=0.9982;RSQ=0.9467;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169207358 . C CA 12593 PASS INDEL;BAVGPOST=0.987;BRSQ=0.961;LDAF=0.1598;AVGPOST=0.9825;RSQ=0.9581;ERATE=0.0007;THETA=0.0041;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 169207360 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.4517;AVGPOST=0.9872;RSQ=0.9849;ERATE=0.0011;THETA=0.0004;AC=988;AN=2184 GT:DS:GL:BD 0.45238096 0
1 169207361 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.974;LDAF=0.1568;AVGPOST=0.9897;RSQ=0.9761;ERATE=0.0003;THETA=0.0002;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 169207436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169207609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6995;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169207649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169207687 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169207749 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.882;LDAF=0.0162;AVGPOST=0.9944;RSQ=0.8727;ERATE=0.0005;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169207767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169207828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0079;AVGPOST=0.9991;RSQ=0.9518;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169207838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0777;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169208011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169208017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169208048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2157;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0002;THETA=0.0002;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169208179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.9937;AVGPOST=0.9984;RSQ=0.9072;ERATE=0.0003;THETA=0.0005;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 169208197 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6617;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169208223 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4019;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169208368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0653;AVGPOST=0.9990;RSQ=0.9924;ERATE=0.0003;THETA=0.0009;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 169208437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7194;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169208763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169208794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6916;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169208828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.8889;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169208860 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.849;LDAF=0.0095;AVGPOST=0.9979;RSQ=0.9151;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169208949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0777;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169208962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.0814;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0003;THETA=0.0035;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 169209118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0661;AVGPOST=0.9992;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 169209272 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1181;AVGPOST=0.9989;RSQ=0.9950;ERATE=0.0004;THETA=0.0009;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 169209327 . T TC 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7132;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169209386 . T TGATAA 70832 PASS INDEL;BAVGPOST=0.934;BRSQ=0.868;LDAF=0.6487;AVGPOST=0.8788;RSQ=0.7965;ERATE=0.0380;THETA=0.0019;AC=1447;AN=2184 GT:DS:GL:BD 0.66254580 1
1 169209504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4691;AVGPOST=0.9903;RSQ=0.9876;ERATE=0.0007;THETA=0.0002;AC=1022;AN=2184 GT:DS:GL:BD 0.46794870 0
1 169209513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0794;AVGPOST=0.9982;RSQ=0.9898;ERATE=0.0004;THETA=0.0005;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 169209884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.997;LDAF=0.7166;AVGPOST=0.9973;RSQ=0.9946;ERATE=0.0005;THETA=0.0006;AC=1567;AN=2184 GT:DS:GL:BD 0.71749085 1
1 169209946 . GATTC G 2719 PASS INDEL;BAVGPOST=0.984;BRSQ=0.918;LDAF=0.1104;AVGPOST=0.9894;RSQ=0.9601;ERATE=0.0004;THETA=0.0003;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 169209947 . ATTCAT A 12344 PASS INDEL;BAVGPOST=0.985;BRSQ=0.921;LDAF=0.1109;AVGPOST=0.9891;RSQ=0.9598;ERATE=0.0004;THETA=0.0006;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 169210069 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169210198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6423;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169210431 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169210490 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0180;AVGPOST=0.9983;RSQ=0.9587;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 169210519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4687;AVGPOST=0.9985;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=1023;AN=2184 GT:DS:GL:BD 0.46840659 0
1 169210584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5223;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169210635 . T TC 65 PASS INDEL;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.6841;ERATE=0.0006;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169210699 . AT A 1531 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0142;AVGPOST=0.9982;RSQ=0.9452;ERATE=0.0005;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169210739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2537;AVGPOST=0.9965;RSQ=0.9926;ERATE=0.0007;THETA=0.0003;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 169211168 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0874;AVGPOST=0.9904;RSQ=0.9545;ERATE=0.0010;THETA=0.0004;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 169211179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.731;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8957;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169211290 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169211305 . GC G 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0027;AVGPOST=0.9962;RSQ=0.3769;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169211443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4941;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169211495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.803;LDAF=0.0091;AVGPOST=0.9984;RSQ=0.9338;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169211541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0047;AVGPOST=0.9960;RSQ=0.6472;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169211568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8842;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169211587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1699;AVGPOST=0.9982;RSQ=0.9952;ERATE=0.0003;THETA=0.0001;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 169211648 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0781;AVGPOST=0.9990;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169211685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2158;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169211690 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.4003;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169211701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6606;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169211775 . GCT G 106 PASS INDEL;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8064;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169211865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5348;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169211883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.4673;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169212109 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7842;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169212252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5651;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169212295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1697;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0004;THETA=0.0031;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 169212321 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5834;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169212438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5427;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169212490 . A AT 6160 PASS INDEL;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0805;AVGPOST=0.9985;RSQ=0.9926;ERATE=0.0004;THETA=0.0010;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169212591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169212625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0012;AVGPOST=0.9982;RSQ=0.4525;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169212632 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7323;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169212706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0149;AVGPOST=0.9994;RSQ=0.9806;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169212901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1694;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0002;THETA=0.0005;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 169212924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169212994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9660;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169213079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8530;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169213084 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4673;AVGPOST=0.9985;RSQ=0.9979;ERATE=0.0005;THETA=0.0005;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169213140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7051;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169213230 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0173;AVGPOST=0.9956;RSQ=0.8978;ERATE=0.0008;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169213247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5386;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169213247 . ATATG A 142 PASS INDEL;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6787;ERATE=0.0006;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169213261 rs71121746 C CAATTAAAT 50742 PASS INDEL;BAVGPOST=0.978;BRSQ=0.965;LDAF=0.4534;AVGPOST=0.9757;RSQ=0.9679;ERATE=0.0013;THETA=0.0004;AC=998;AN=2184 GT:DS:GL:BD 0.45695969 0
1 169213294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.4674;AVGPOST=0.9969;RSQ=0.9954;ERATE=0.0006;THETA=0.0007;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169213395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4865;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169213483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9883;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169213593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4676;AVGPOST=0.9972;RSQ=0.9958;ERATE=0.0006;THETA=0.0003;AC=1022;AN=2184 GT:DS:GL:BD 0.46794870 0
1 169213599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.953;LDAF=0.0885;AVGPOST=0.9892;RSQ=0.9487;ERATE=0.0016;THETA=0.0007;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 169213617 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.2118;AVGPOST=0.9922;RSQ=0.9879;ERATE=0.0005;THETA=0.0004;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 169213679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.973;LDAF=0.1654;AVGPOST=0.9945;RSQ=0.9857;ERATE=0.0005;THETA=0.0004;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 169213687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.647;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8569;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169213689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.974;LDAF=0.1679;AVGPOST=0.9962;RSQ=0.9911;ERATE=0.0004;THETA=0.0005;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 169213742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.875;LDAF=0.3958;AVGPOST=0.9295;RSQ=0.9171;ERATE=0.0022;THETA=0.0004;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 169213746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.915;BRSQ=0.873;LDAF=0.3937;AVGPOST=0.9337;RSQ=0.9227;ERATE=0.0009;THETA=0.0003;AC=876;AN=2184 GT:DS:GL:BD 0.40109891 0
1 169213750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.869;LDAF=0.3929;AVGPOST=0.9431;RSQ=0.9345;ERATE=0.0008;THETA=0.0010;AC=872;AN=2184 GT:DS:GL:BD 0.39926741 0
1 169213806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0098;AVGPOST=0.9985;RSQ=0.9240;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169213823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.943;LDAF=0.0645;AVGPOST=0.9978;RSQ=0.9826;ERATE=0.0006;THETA=0.0005;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 169213860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.935;LDAF=0.4567;AVGPOST=0.9766;RSQ=0.9686;ERATE=0.0023;THETA=0.0006;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 169214132 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2144;AVGPOST=0.9962;RSQ=0.9940;ERATE=0.0006;THETA=0.0003;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 169214154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6337;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169214170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0004;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169214228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4655;AVGPOST=0.9968;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=1017;AN=2184 GT:DS:GL:BD 0.46565935 0
1 169214248 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.725;LDAF=0.0075;AVGPOST=0.9964;RSQ=0.8145;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169214293 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0801;AVGPOST=0.9985;RSQ=0.9911;ERATE=0.0004;THETA=0.0004;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169214355 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169214386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8651;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169214437 rs34123578 CA C 13660 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0780;AVGPOST=0.9988;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169214590 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6207;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169214596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1695;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 169214629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9208;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169214801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0101;AVGPOST=0.9969;RSQ=0.8929;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169214822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.919;LDAF=0.0130;AVGPOST=0.9989;RSQ=0.9605;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169214961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169214988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2155;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0003;THETA=0.0008;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169215003 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2168;AVGPOST=0.9972;RSQ=0.9952;ERATE=0.0006;THETA=0.0005;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 169215040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169215068 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0670;AVGPOST=0.9990;RSQ=0.9923;ERATE=0.0005;THETA=0.0005;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 169215242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.826;LDAF=0.0083;AVGPOST=0.9995;RSQ=0.9769;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169215363 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0801;AVGPOST=0.9993;RSQ=0.9953;ERATE=0.0004;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169215485 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.762;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9341;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169215574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2162;AVGPOST=0.9986;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169215587 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8368;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169215653 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169215734 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8156;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169215855 rs3216527 AT A 4842 PASS INDEL;BAVGPOST=0.990;BRSQ=0.922;LDAF=0.0828;AVGPOST=0.9750;RSQ=0.8746;ERATE=0.0051;THETA=0.0003;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 169215857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9563;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169215912 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169216118 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6560;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169216122 rs3831767 TAAC T 9014 PASS INDEL;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0800;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169216315 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169216366 rs35977750 TCA T 3074 PASS INDEL;BAVGPOST=0.997;BRSQ=0.940;LDAF=0.0186;AVGPOST=0.9973;RSQ=0.9340;ERATE=0.0004;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 169216412 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.9926;AVGPOST=0.9995;RSQ=0.9693;ERATE=0.0002;THETA=0.0002;AC=2168;AN=2184 GT:DS:GL:BD 0.99267399 1
1 169216445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0073;AVGPOST=0.9998;RSQ=0.9879;ERATE=0.0002;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169216722 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9719;ERATE=0.0003;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169216817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169216872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1696;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 169216920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9319;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169216932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169216937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4676;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0005;THETA=0.0005;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169216956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.534;LDAF=0.0036;AVGPOST=0.9975;RSQ=0.7259;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169217002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5213;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169217121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.837;LDAF=0.0136;AVGPOST=0.9968;RSQ=0.9076;ERATE=0.0007;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169217323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.7283;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169217331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8204;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169217343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6518;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169217433 . A AT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.6284;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169217564 . AT A 12 PASS INDEL;BAVGPOST=0.991;BRSQ=0.486;LDAF=0.0143;AVGPOST=0.9795;RSQ=0.4620;ERATE=0.0036;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169217598 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5179;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169217641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4676;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169217690 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169217778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.929;LDAF=0.0193;AVGPOST=0.9984;RSQ=0.9644;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 169217827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2517;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0005;THETA=0.0003;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 169218029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2498;AVGPOST=0.9973;RSQ=0.9945;ERATE=0.0005;THETA=0.0006;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 169218030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169218079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169218160 . CTTGT C 14200 PASS INDEL;BAVGPOST=0.990;BRSQ=0.955;LDAF=0.1186;AVGPOST=0.9941;RSQ=0.9768;ERATE=0.0006;THETA=0.0003;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 169218170 . TG T 1674 PASS INDEL;BAVGPOST=0.981;BRSQ=0.906;LDAF=0.1077;AVGPOST=0.9826;RSQ=0.9291;ERATE=0.0015;THETA=0.0005;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 169218181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169218227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6856;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169218270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.527;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169218295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0086;AVGPOST=0.9989;RSQ=0.9443;ERATE=0.0003;THETA=0.0030;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169218298 . TG T 422 PASS INDEL;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0044;AVGPOST=0.9981;RSQ=0.8508;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169218334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.1745;AVGPOST=0.9967;RSQ=0.9925;ERATE=0.0004;THETA=0.0005;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 169218340 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4654;AVGPOST=0.9963;RSQ=0.9951;ERATE=0.0003;THETA=0.0012;AC=1017;AN=2184 GT:DS:GL:BD 0.46565935 0
1 169218373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6791;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169218572 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169218657 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0002;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169218658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169218776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0135;AVGPOST=0.9996;RSQ=0.9862;ERATE=0.0002;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169218924 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1171;AVGPOST=0.9977;RSQ=0.9909;ERATE=0.0003;THETA=0.0010;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 169219029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0799;AVGPOST=0.9991;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169219185 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0781;AVGPOST=0.9982;RSQ=0.9895;ERATE=0.0003;THETA=0.0010;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 169219290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169219304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6244;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169219315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169219340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6323;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169219344 . A AT 43 PASS INDEL;BAVGPOST=0.981;BRSQ=0.453;LDAF=0.0336;AVGPOST=0.9556;RSQ=0.4594;ERATE=0.0104;THETA=0.0009;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 169219384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8893;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169219406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6250;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169219467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9664;ERATE=0.0002;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169219527 . CT C 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6462;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169219629 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169219662 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7189;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169219679 . TTTG T 176 PASS INDEL;BAVGPOST=0.997;BRSQ=0.702;LDAF=0.0096;AVGPOST=0.9888;RSQ=0.5405;ERATE=0.0031;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169219700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.861;LDAF=0.0105;AVGPOST=0.9975;RSQ=0.9026;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169219713 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0132;AVGPOST=0.9997;RSQ=0.9893;ERATE=0.0002;THETA=0.0012;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169219757 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169219773 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169219806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169219827 . A AT 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7087;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169219830 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4181;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169219833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169219933 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0077;AVGPOST=0.9989;RSQ=0.9339;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169220000 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0076;AVGPOST=0.9979;RSQ=0.8721;ERATE=0.0006;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169220066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169220086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6343;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169220187 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1719;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169220250 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169220385 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9996;RSQ=0.9870;ERATE=0.0002;THETA=0.0060;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169220420 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4673;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0003;THETA=0.0009;AC=1021;AN=2184 GT:DS:GL:BD 0.46749085 0
1 169220424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169220435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169220436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2156;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169220479 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2157;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0004;THETA=0.0005;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169220487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5861;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169220730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8533;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169220757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5448;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169220772 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1718;AVGPOST=0.9984;RSQ=0.9958;ERATE=0.0004;THETA=0.0009;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169220810 rs35877266 T TA 5474 PASS INDEL;BAVGPOST=0.833;BRSQ=0.644;LDAF=0.2589;AVGPOST=0.8522;RSQ=0.7347;ERATE=0.0069;THETA=0.0004;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 169220811 . A AT 205 PASS INDEL;BAVGPOST=0.808;BRSQ=0.551;LDAF=0.2202;AVGPOST=0.8229;RSQ=0.6515;ERATE=0.0086;THETA=0.0005;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 169220829 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.880;LDAF=0.0161;AVGPOST=0.9967;RSQ=0.9011;ERATE=0.0005;THETA=0.0022;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169220871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.885;LDAF=0.1668;AVGPOST=0.9690;RSQ=0.9246;ERATE=0.0021;THETA=0.0009;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 169221046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0142;AVGPOST=0.9981;RSQ=0.9363;ERATE=0.0004;THETA=0.0022;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169221559 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0058;AVGPOST=0.9949;RSQ=0.6786;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169221609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5595;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169221796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.4952;ERATE=0.0009;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169221843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.948;LDAF=0.3774;AVGPOST=0.9831;RSQ=0.9755;ERATE=0.0022;THETA=0.0005;AC=834;AN=2184 GT:DS:GL:BD 0.38186812 0
1 169221867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4339;ERATE=0.0005;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169221940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.880;LDAF=0.1611;AVGPOST=0.9739;RSQ=0.9363;ERATE=0.0005;THETA=0.0037;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 169222318 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.1707;AVGPOST=0.9942;RSQ=0.9852;ERATE=0.0008;THETA=0.0003;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 169222809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0022;AVGPOST=0.9970;RSQ=0.4444;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169222814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2156;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0002;THETA=0.0002;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169222815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0220;AVGPOST=0.9988;RSQ=0.9779;ERATE=0.0004;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169222844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169222907 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.1694;AVGPOST=0.9959;RSQ=0.9900;ERATE=0.0004;THETA=0.0005;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 169222955 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.966;LDAF=0.1657;AVGPOST=0.9883;RSQ=0.9713;ERATE=0.0009;THETA=0.0004;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 169223185 . C CT 33 PASS INDEL;BAVGPOST=0.966;BRSQ=0.156;LDAF=0.0325;AVGPOST=0.9519;RSQ=0.3939;ERATE=0.0026;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169223254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0163;AVGPOST=0.9983;RSQ=0.9537;ERATE=0.0007;THETA=0.0020;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169223272 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0697;AVGPOST=0.9937;RSQ=0.9594;ERATE=0.0006;THETA=0.0006;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 169223545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.843;LDAF=0.1142;AVGPOST=0.9635;RSQ=0.8607;ERATE=0.0022;THETA=0.0005;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 169223637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.691;LDAF=0.0936;AVGPOST=0.9687;RSQ=0.8681;ERATE=0.0010;THETA=0.0030;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 169223678 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.869;BRSQ=0.619;LDAF=0.1454;AVGPOST=0.8947;RSQ=0.7273;ERATE=0.0049;THETA=0.0010;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 169224072 . TC T 354 PASS INDEL;BAVGPOST=0.996;BRSQ=0.812;LDAF=0.0185;AVGPOST=0.9840;RSQ=0.6486;ERATE=0.0015;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169225185 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.693;LDAF=0.0161;AVGPOST=0.9831;RSQ=0.5953;ERATE=0.0011;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169225591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.660;LDAF=0.0059;AVGPOST=0.9961;RSQ=0.7322;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169225708 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0156;AVGPOST=0.9947;RSQ=0.8558;ERATE=0.0007;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169225710 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0092;AVGPOST=0.9872;RSQ=0.4679;ERATE=0.0007;THETA=0.0023;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169225739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.983;LDAF=0.2415;AVGPOST=0.9818;RSQ=0.9767;ERATE=0.0005;THETA=0.0003;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 169225801 MERGED_DEL_2_6232 T <DEL> . . SV;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2327;AVGPOST=0.9933;RSQ=0.9873;ERATE=0.0003;THETA=0.0231;CIEND=-228,242;CIPOS=-156,215;END=169242950;SOURCE=CNVnator_169225801_169242900,CNVnator_16922580 GT:DS:GL:BD 0.23351648 0
1 169226295 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.922;LDAF=0.2299;AVGPOST=0.9548;RSQ=0.9341;ERATE=0.0007;THETA=0.0096;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 169226404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.500;LDAF=0.0396;AVGPOST=0.9655;RSQ=0.6582;ERATE=0.0030;THETA=0.0072;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 169226441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.882;BRSQ=0.744;LDAF=0.1946;AVGPOST=0.8767;RSQ=0.7614;ERATE=0.0076;THETA=0.0083;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 169226448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.845;BRSQ=0.772;LDAF=0.4740;AVGPOST=0.7984;RSQ=0.7307;ERATE=0.0215;THETA=0.0098;AC=1046;AN=2184 GT:DS:GL:BD 0.47893772 0
1 169226527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.918;LDAF=0.2195;AVGPOST=0.9598;RSQ=0.9393;ERATE=0.0006;THETA=0.0032;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 169226529 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4174;ERATE=0.0006;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169226546 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.910;LDAF=0.2629;AVGPOST=0.9310;RSQ=0.9115;ERATE=0.0070;THETA=0.0005;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 169226559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0269;AVGPOST=0.9941;RSQ=0.9259;ERATE=0.0005;THETA=0.0010;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 169226572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9443;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169226574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0174;AVGPOST=0.9976;RSQ=0.9492;ERATE=0.0004;THETA=0.0019;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 169226598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.940;LDAF=0.2430;AVGPOST=0.9556;RSQ=0.9382;ERATE=0.0021;THETA=0.0004;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 169226638 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8598;ERATE=0.0004;THETA=0.0054;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169226676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.959;LDAF=0.1119;AVGPOST=0.9685;RSQ=0.9100;ERATE=0.0009;THETA=0.0022;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 169226683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.947;LDAF=0.2346;AVGPOST=0.9685;RSQ=0.9564;ERATE=0.0010;THETA=0.0020;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 169226692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.934;LDAF=0.2459;AVGPOST=0.9489;RSQ=0.9316;ERATE=0.0021;THETA=0.0039;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 169226727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.884;LDAF=0.0919;AVGPOST=0.9726;RSQ=0.9110;ERATE=0.0008;THETA=0.0023;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 169226736 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.868;LDAF=0.1027;AVGPOST=0.9570;RSQ=0.8673;ERATE=0.0021;THETA=0.0018;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 169226740 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.884;BRSQ=0.737;LDAF=0.1363;AVGPOST=0.9256;RSQ=0.8120;ERATE=0.0011;THETA=0.0051;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 169226754 rs59754840 AC A 922 PASS INDEL;BAVGPOST=0.878;BRSQ=0.682;LDAF=0.1448;AVGPOST=0.9257;RSQ=0.8358;ERATE=0.0010;THETA=0.0010;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 169226902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.990;LDAF=0.2344;AVGPOST=0.9872;RSQ=0.9837;ERATE=0.0005;THETA=0.0006;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 169226916 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.992;LDAF=0.2507;AVGPOST=0.9853;RSQ=0.9810;ERATE=0.0004;THETA=0.0003;AC=543;AN=2184 GT:DS:GL:BD 0.24862637 0
1 169226939 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.962;LDAF=0.1148;AVGPOST=0.9789;RSQ=0.9459;ERATE=0.0006;THETA=0.0028;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 169226940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7881;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169226949 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0018;AVGPOST=0.9971;RSQ=0.3083;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169226962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169226965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6718;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169226977 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7409;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169226997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0170;AVGPOST=0.9987;RSQ=0.9698;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 169227033 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0055;AVGPOST=0.9931;RSQ=0.5048;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169227087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.780;LDAF=0.0077;AVGPOST=0.9972;RSQ=0.8480;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169227186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0060;AVGPOST=0.9972;RSQ=0.7982;ERATE=0.0005;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169227254 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0168;AVGPOST=0.9993;RSQ=0.9836;ERATE=0.0003;THETA=0.0008;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 169227335 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8245;ERATE=0.0004;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169227342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3274;ERATE=0.0006;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169227379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0171;AVGPOST=0.9973;RSQ=0.9499;ERATE=0.0004;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 169227405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6031;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169227412 . CA C 184 PASS INDEL;BAVGPOST=0.994;BRSQ=0.516;LDAF=0.0068;AVGPOST=0.9944;RSQ=0.7114;ERATE=0.0006;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169227441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0050;AVGPOST=0.9985;RSQ=0.8740;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169227445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0023;AVGPOST=0.9962;RSQ=0.2908;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169227525 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.2558;AVGPOST=0.9881;RSQ=0.9848;ERATE=0.0004;THETA=0.0005;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 169227584 . CA C 420 PASS INDEL;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0342;AVGPOST=0.9859;RSQ=0.8553;ERATE=0.0011;THETA=0.0013;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 169227592 . AT A 1212 PASS INDEL;BAVGPOST=0.953;BRSQ=0.823;LDAF=0.1072;AVGPOST=0.9275;RSQ=0.7680;ERATE=0.0025;THETA=0.0014;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 169227593 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.824;LDAF=0.1263;AVGPOST=0.9207;RSQ=0.7828;ERATE=0.0054;THETA=0.0004;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 169227635 . TATATATATAC T 24630 PASS INDEL;BAVGPOST=0.778;BRSQ=0.682;LDAF=0.5491;AVGPOST=0.8246;RSQ=0.7598;ERATE=0.0106;THETA=0.0008;AC=1197;AN=2184 GT:DS:GL:BD 0.54807693 1
1 169227637 . TATATATAC T 16722 PASS INDEL;BAVGPOST=0.777;BRSQ=0.678;LDAF=0.5427;AVGPOST=0.7842;RSQ=0.6991;ERATE=0.0181;THETA=0.0028;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 169227675 . TATATC T 1403 PASS INDEL;BAVGPOST=0.993;BRSQ=0.886;LDAF=0.0254;AVGPOST=0.9974;RSQ=0.9633;ERATE=0.0004;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 169227689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0051;AVGPOST=0.9934;RSQ=0.5026;ERATE=0.0008;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169227723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.992;LDAF=0.2564;AVGPOST=0.9825;RSQ=0.9763;ERATE=0.0010;THETA=0.0037;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 169227753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3775;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169227794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.963;LDAF=0.1110;AVGPOST=0.9836;RSQ=0.9560;ERATE=0.0004;THETA=0.0003;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 169227819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8651;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169227915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0031;AVGPOST=0.9954;RSQ=0.4668;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169227947 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.943;LDAF=0.1527;AVGPOST=0.9799;RSQ=0.9502;ERATE=0.0004;THETA=0.0007;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 169227952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0254;AVGPOST=0.9979;RSQ=0.9705;ERATE=0.0004;THETA=0.0011;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 169228102 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9521;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169228117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9436;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169228165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.723;LDAF=0.0079;AVGPOST=0.9919;RSQ=0.5772;ERATE=0.0014;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169228333 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.947;LDAF=0.1139;AVGPOST=0.9809;RSQ=0.9469;ERATE=0.0010;THETA=0.0007;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 169228395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.994;LDAF=0.2558;AVGPOST=0.9877;RSQ=0.9836;ERATE=0.0005;THETA=0.0003;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 169228396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.963;LDAF=0.1119;AVGPOST=0.9840;RSQ=0.9572;ERATE=0.0003;THETA=0.0005;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 169228495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.954;LDAF=0.6043;AVGPOST=0.9671;RSQ=0.9585;ERATE=0.0004;THETA=0.0003;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 169228566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3745;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169229135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169229144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.947;LDAF=0.1572;AVGPOST=0.9795;RSQ=0.9509;ERATE=0.0005;THETA=0.0004;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 169229281 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0039;AVGPOST=0.9969;RSQ=0.6588;ERATE=0.0006;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169229327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.993;LDAF=0.2542;AVGPOST=0.9878;RSQ=0.9839;ERATE=0.0004;THETA=0.0006;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 169229351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.3835;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169229369 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0173;AVGPOST=0.9991;RSQ=0.9823;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169229396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7391;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169229397 . AG A 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5694;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169229407 . GAGTA G 357 PASS INDEL;BAVGPOST=0.997;BRSQ=0.581;LDAF=0.0064;AVGPOST=0.9930;RSQ=0.5883;ERATE=0.0008;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169229431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4676;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169229583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0039;AVGPOST=0.9952;RSQ=0.5127;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169229599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0035;AVGPOST=0.9962;RSQ=0.5735;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169229683 . A AT 856 PASS INDEL;BAVGPOST=0.997;BRSQ=0.794;LDAF=0.0108;AVGPOST=0.9909;RSQ=0.7004;ERATE=0.0006;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169229692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9982;RSQ=0.3044;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169229768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.992;LDAF=0.2752;AVGPOST=0.9876;RSQ=0.9839;ERATE=0.0003;THETA=0.0010;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 169229855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.992;LDAF=0.2403;AVGPOST=0.9888;RSQ=0.9848;ERATE=0.0003;THETA=0.0003;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 169229862 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9002;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169229908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0233;AVGPOST=0.9972;RSQ=0.9569;ERATE=0.0004;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 169229964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5157;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169230077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.4998;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169230145 . C CA 1992 PASS INDEL;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0176;AVGPOST=0.9985;RSQ=0.9783;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169230180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.2545;AVGPOST=0.9890;RSQ=0.9852;ERATE=0.0004;THETA=0.0003;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 169230197 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0120;AVGPOST=0.9988;RSQ=0.9665;ERATE=0.0003;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169230284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0174;AVGPOST=0.9979;RSQ=0.9540;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 169230316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0176;AVGPOST=0.9985;RSQ=0.9731;ERATE=0.0004;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169230395 . T TA 400 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0045;AVGPOST=0.9974;RSQ=0.7260;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169230443 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4835;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169230468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0096;AVGPOST=0.9986;RSQ=0.9529;ERATE=0.0002;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169230631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.762;LDAF=0.0230;AVGPOST=0.9899;RSQ=0.8526;ERATE=0.0004;THETA=0.0009;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169230641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.963;LDAF=0.1126;AVGPOST=0.9840;RSQ=0.9582;ERATE=0.0002;THETA=0.0006;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 169230738 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7331;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169231076 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.952;LDAF=0.6063;AVGPOST=0.9716;RSQ=0.9632;ERATE=0.0004;THETA=0.0005;AC=1319;AN=2184 GT:DS:GL:BD 0.60393775 1
1 169231177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0094;AVGPOST=0.9958;RSQ=0.8409;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169231361 . A AC 39767 PASS INDEL;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.2538;AVGPOST=0.9901;RSQ=0.9867;ERATE=0.0004;THETA=0.0005;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 169231362 rs67851939 A AT 43876 PASS INDEL;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.2542;AVGPOST=0.9898;RSQ=0.9861;ERATE=0.0004;THETA=0.0007;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 169231414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4662;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169231415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0208;AVGPOST=0.9985;RSQ=0.9739;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 169231542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.2742;AVGPOST=0.9902;RSQ=0.9873;ERATE=0.0002;THETA=0.0006;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 169231550 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8163;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169231568 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5579;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169231588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9259;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169231601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.4754;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169231813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0025;AVGPOST=0.9959;RSQ=0.3116;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169231840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0053;AVGPOST=0.9967;RSQ=0.7434;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169231878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0176;AVGPOST=0.9986;RSQ=0.9743;ERATE=0.0004;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169231914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169231935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0061;AVGPOST=0.9968;RSQ=0.7998;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169231992 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.2535;AVGPOST=0.9909;RSQ=0.9877;ERATE=0.0002;THETA=0.0003;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 169231996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4946;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169232046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5450;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169232118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0250;AVGPOST=0.9989;RSQ=0.9840;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 169232141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169232213 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0251;AVGPOST=0.9985;RSQ=0.9789;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 169232302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5029;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169232317 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.963;LDAF=0.1140;AVGPOST=0.9809;RSQ=0.9499;ERATE=0.0008;THETA=0.0003;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 169232366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.993;LDAF=0.2526;AVGPOST=0.9907;RSQ=0.9872;ERATE=0.0003;THETA=0.0004;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 169232841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.992;LDAF=0.2542;AVGPOST=0.9897;RSQ=0.9859;ERATE=0.0003;THETA=0.0003;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 169233007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169233086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0023;AVGPOST=0.9960;RSQ=0.3369;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169233089 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7354;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169233319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.993;LDAF=0.2540;AVGPOST=0.9901;RSQ=0.9866;ERATE=0.0003;THETA=0.0006;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 169233395 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6599;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169233452 . GA G 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0034;AVGPOST=0.9948;RSQ=0.4416;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169233646 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.4621;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169233647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9484;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169233683 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6565;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169233952 . TTA T 70 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5207;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169234076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0106;AVGPOST=0.9964;RSQ=0.8784;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169234211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.4847;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169234358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7942;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169234371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5810;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169234559 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9509;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169234586 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0105;AVGPOST=0.9958;RSQ=0.8571;ERATE=0.0004;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169234607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169234650 . TCAA T 260 PASS INDEL;BAVGPOST=0.997;BRSQ=0.888;LDAF=0.0074;AVGPOST=0.9979;RSQ=0.8997;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169234651 . CAAG C 1323 PASS INDEL;BAVGPOST=0.997;BRSQ=0.887;LDAF=0.0079;AVGPOST=0.9970;RSQ=0.8614;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169234710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6424;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169234752 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0180;AVGPOST=0.9979;RSQ=0.9660;ERATE=0.0004;THETA=0.0012;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 169234853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9505;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169234862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.2536;AVGPOST=0.9904;RSQ=0.9871;ERATE=0.0003;THETA=0.0003;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 169235022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.948;LDAF=0.1511;AVGPOST=0.9841;RSQ=0.9631;ERATE=0.0006;THETA=0.0004;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 169235077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0184;AVGPOST=0.9987;RSQ=0.9766;ERATE=0.0004;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 169235086 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0027;AVGPOST=0.9967;RSQ=0.4897;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169235127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7417;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169235262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8605;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169235310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.5716;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169235316 . ATT A 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4702;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169235444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169235463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8348;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169235493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.954;LDAF=0.5995;AVGPOST=0.9683;RSQ=0.9591;ERATE=0.0012;THETA=0.0005;AC=1298;AN=2184 GT:DS:GL:BD 0.59432232 1
1 169235601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4978;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169235939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.2537;AVGPOST=0.9904;RSQ=0.9874;ERATE=0.0003;THETA=0.0004;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 169236177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.655;LDAF=0.0035;AVGPOST=0.9971;RSQ=0.6522;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169236203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0034;AVGPOST=0.9948;RSQ=0.4149;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169236221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.579;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.5416;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169236267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0092;AVGPOST=0.9989;RSQ=0.9524;ERATE=0.0004;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169236363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9451;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169236449 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6761;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169236513 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3421;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169236583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.829;LDAF=0.0246;AVGPOST=0.9918;RSQ=0.8827;ERATE=0.0006;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 169236626 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0173;AVGPOST=0.9991;RSQ=0.9832;ERATE=0.0004;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169236737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4059;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169236777 . CA C 6376 PASS INDEL;BAVGPOST=0.973;BRSQ=0.964;LDAF=0.2418;AVGPOST=0.9684;RSQ=0.9589;ERATE=0.0012;THETA=0.0002;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 169236782 rs61279812 AC A 34298 PASS INDEL;BAVGPOST=0.985;BRSQ=0.982;LDAF=0.2532;AVGPOST=0.9859;RSQ=0.9818;ERATE=0.0005;THETA=0.0006;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 169236990 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4304;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169237318 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.5447;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169237428 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0026;AVGPOST=0.9966;RSQ=0.4815;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169237475 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.7886;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169237590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.2536;AVGPOST=0.9892;RSQ=0.9855;ERATE=0.0003;THETA=0.0005;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 169237619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0173;AVGPOST=0.9990;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169237632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.955;LDAF=0.5994;AVGPOST=0.9719;RSQ=0.9634;ERATE=0.0004;THETA=0.0005;AC=1299;AN=2184 GT:DS:GL:BD 0.59478021 1
1 169237678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.941;LDAF=0.1537;AVGPOST=0.9810;RSQ=0.9569;ERATE=0.0004;THETA=0.0005;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 169237717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8749;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169237718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.4335;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169237990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169238092 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.2538;AVGPOST=0.9907;RSQ=0.9877;ERATE=0.0004;THETA=0.0007;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 169238142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0023;AVGPOST=0.9971;RSQ=0.4882;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169238150 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5270;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169238203 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0022;AVGPOST=0.9969;RSQ=0.4828;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169238382 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.3484;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169238511 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4327;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169238545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0159;AVGPOST=0.9988;RSQ=0.9742;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169238558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.2520;AVGPOST=0.9866;RSQ=0.9827;ERATE=0.0006;THETA=0.0004;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 169238600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8288;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169238659 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0158;AVGPOST=0.9991;RSQ=0.9814;ERATE=0.0002;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169238677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.2543;AVGPOST=0.9896;RSQ=0.9865;ERATE=0.0004;THETA=0.0008;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 169238745 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.994;LDAF=0.2537;AVGPOST=0.9909;RSQ=0.9879;ERATE=0.0003;THETA=0.0007;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 169238853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0111;AVGPOST=0.9988;RSQ=0.9536;ERATE=0.0004;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169238919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0162;AVGPOST=0.9980;RSQ=0.9600;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169238968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4739;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169238974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0069;AVGPOST=0.9978;RSQ=0.8608;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169238982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4596;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169238984 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4189;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169239139 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169239173 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.719;LDAF=0.0046;AVGPOST=0.9951;RSQ=0.5704;ERATE=0.0007;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169239187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.944;LDAF=0.1535;AVGPOST=0.9815;RSQ=0.9590;ERATE=0.0004;THETA=0.0003;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 169239261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5314;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169239337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0211;AVGPOST=0.9979;RSQ=0.9653;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 169239421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0042;AVGPOST=0.9981;RSQ=0.7824;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169239529 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6559;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169239586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8068;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169239699 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0069;AVGPOST=0.9978;RSQ=0.8621;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169239744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9056;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169239768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7241;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169239874 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.446;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.2846;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169240014 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.4594;ERATE=0.0006;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169240045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5023;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169240084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.954;LDAF=0.5984;AVGPOST=0.9719;RSQ=0.9644;ERATE=0.0005;THETA=0.0007;AC=1300;AN=2184 GT:DS:GL:BD 0.59523809 1
1 169240102 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.770;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7655;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169240313 rs36103852 TA T 8216 PASS INDEL;BAVGPOST=0.982;BRSQ=0.931;LDAF=0.1204;AVGPOST=0.9833;RSQ=0.9555;ERATE=0.0003;THETA=0.0014;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 169240433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6256;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169240445 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0218;AVGPOST=0.9966;RSQ=0.9462;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 169240626 . AC A 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7979;ERATE=0.0002;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169240686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7452;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169240738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.947;LDAF=0.1510;AVGPOST=0.9840;RSQ=0.9630;ERATE=0.0004;THETA=0.0006;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 169240769 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5516;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169240823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4316;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169240874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169240926 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7357;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169240987 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.967;LDAF=0.2370;AVGPOST=0.9753;RSQ=0.9634;ERATE=0.0016;THETA=0.0005;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 169241029 . CCTATA C 660 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0050;AVGPOST=0.9983;RSQ=0.8628;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169241196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0179;AVGPOST=0.9959;RSQ=0.9146;ERATE=0.0008;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 169241215 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0018;AVGPOST=0.9968;RSQ=0.1800;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169241266 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0058;AVGPOST=0.9962;RSQ=0.7388;ERATE=0.0005;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169241288 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0061;AVGPOST=0.9982;RSQ=0.8918;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169241298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0026;AVGPOST=0.9957;RSQ=0.2773;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169241442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0176;AVGPOST=0.9955;RSQ=0.9172;ERATE=0.0004;THETA=0.0032;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169242022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0107;AVGPOST=0.9965;RSQ=0.8818;ERATE=0.0006;THETA=0.0031;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169242032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8780;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169242064 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0164;AVGPOST=0.9973;RSQ=0.9402;ERATE=0.0006;THETA=0.0009;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169242221 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0055;AVGPOST=0.9988;RSQ=0.9110;ERATE=0.0004;THETA=0.0023;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169242371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.539;LDAF=0.0048;AVGPOST=0.9915;RSQ=0.2860;ERATE=0.0009;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169242422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0048;AVGPOST=0.9979;RSQ=0.8561;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169242468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0047;AVGPOST=0.9926;RSQ=0.3420;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169242633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.978;LDAF=0.2633;AVGPOST=0.9728;RSQ=0.9650;ERATE=0.0023;THETA=0.0006;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 169242641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.9099;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169242645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0049;AVGPOST=0.9952;RSQ=0.6368;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169242661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.978;LDAF=0.2595;AVGPOST=0.9793;RSQ=0.9735;ERATE=0.0008;THETA=0.0014;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 169242689 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.983;LDAF=0.2512;AVGPOST=0.9819;RSQ=0.9753;ERATE=0.0006;THETA=0.0008;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 169242699 . ATT A 1379 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0271;AVGPOST=0.9914;RSQ=0.8874;ERATE=0.0006;THETA=0.0011;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 169242725 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.539;LDAF=0.0033;AVGPOST=0.9963;RSQ=0.5553;ERATE=0.0006;THETA=0.0055;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169242739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.787;LDAF=0.0304;AVGPOST=0.9802;RSQ=0.7727;ERATE=0.0013;THETA=0.0014;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 169242740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.725;LDAF=0.0213;AVGPOST=0.9878;RSQ=0.7902;ERATE=0.0012;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 169242806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0029;AVGPOST=0.9951;RSQ=0.3696;ERATE=0.0006;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169242817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.559;LDAF=0.0095;AVGPOST=0.9904;RSQ=0.6131;ERATE=0.0006;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169243549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.815;LDAF=0.1311;AVGPOST=0.9698;RSQ=0.9173;ERATE=0.0007;THETA=0.0009;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 169243554 . TG T 310 PASS INDEL;BAVGPOST=0.989;BRSQ=0.687;LDAF=0.0188;AVGPOST=0.9928;RSQ=0.8449;ERATE=0.0005;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 169243767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0105;AVGPOST=0.9958;RSQ=0.8777;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169243775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0258;AVGPOST=0.9945;RSQ=0.9276;ERATE=0.0004;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 169243801 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7190;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169243803 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6534;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169244022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.955;LDAF=0.2390;AVGPOST=0.9660;RSQ=0.9546;ERATE=0.0009;THETA=0.0014;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 169244181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.833;LDAF=0.0069;AVGPOST=0.9956;RSQ=0.7788;ERATE=0.0005;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169244211 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.915;BRSQ=0.840;LDAF=0.1949;AVGPOST=0.9393;RSQ=0.9042;ERATE=0.0004;THETA=0.0011;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 169244292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.846;LDAF=0.2127;AVGPOST=0.9346;RSQ=0.8986;ERATE=0.0008;THETA=0.0005;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 169244350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0040;AVGPOST=0.9966;RSQ=0.7134;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169244380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.959;LDAF=0.2430;AVGPOST=0.9755;RSQ=0.9667;ERATE=0.0008;THETA=0.0004;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 169244434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.954;LDAF=0.2421;AVGPOST=0.9778;RSQ=0.9703;ERATE=0.0004;THETA=0.0008;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 169244435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6880;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169244445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5468;ERATE=0.0009;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169244460 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.569;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5771;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169244475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.637;LDAF=0.0074;AVGPOST=0.9902;RSQ=0.4993;ERATE=0.0007;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169244489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0133;AVGPOST=0.9910;RSQ=0.7407;ERATE=0.0007;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169244507 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.932;LDAF=0.1204;AVGPOST=0.9788;RSQ=0.9422;ERATE=0.0006;THETA=0.0004;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 169244529 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8468;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169244573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.949;LDAF=0.2405;AVGPOST=0.9663;RSQ=0.9548;ERATE=0.0017;THETA=0.0006;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 169244634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0352;AVGPOST=0.9755;RSQ=0.7635;ERATE=0.0009;THETA=0.0011;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 169244711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.917;LDAF=0.2411;AVGPOST=0.9527;RSQ=0.9320;ERATE=0.0024;THETA=0.0011;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 169244712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.899;LDAF=0.1132;AVGPOST=0.9731;RSQ=0.9281;ERATE=0.0011;THETA=0.0008;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 169244830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.538;LDAF=0.0064;AVGPOST=0.9896;RSQ=0.3838;ERATE=0.0008;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169244894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.917;LDAF=0.2540;AVGPOST=0.9675;RSQ=0.9562;ERATE=0.0007;THETA=0.0008;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 169244910 rs61252631 T TTTATTTCC 2080 PASS INDEL;BAVGPOST=0.991;BRSQ=0.861;LDAF=0.0253;AVGPOST=0.9940;RSQ=0.9180;ERATE=0.0005;THETA=0.0009;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 169244981 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.5449;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169245000 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4676;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169245320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0056;AVGPOST=0.9934;RSQ=0.5486;ERATE=0.0005;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169245329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0038;AVGPOST=0.9977;RSQ=0.7517;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169245450 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.683;LDAF=0.0423;AVGPOST=0.9747;RSQ=0.8118;ERATE=0.0005;THETA=0.0012;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 169245455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3715;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169245473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.961;LDAF=0.1114;AVGPOST=0.9800;RSQ=0.9459;ERATE=0.0004;THETA=0.0006;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 169245495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.628;LDAF=0.0127;AVGPOST=0.9838;RSQ=0.5343;ERATE=0.0018;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169245523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0090;AVGPOST=0.9965;RSQ=0.8190;ERATE=0.0009;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169245600 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.919;LDAF=0.5663;AVGPOST=0.9206;RSQ=0.9088;ERATE=0.0030;THETA=0.0048;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 169245629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0160;AVGPOST=0.9950;RSQ=0.8937;ERATE=0.0005;THETA=0.0034;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169245630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.947;LDAF=0.2580;AVGPOST=0.9631;RSQ=0.9522;ERATE=0.0015;THETA=0.0026;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 169245669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.957;LDAF=0.1133;AVGPOST=0.9752;RSQ=0.9308;ERATE=0.0012;THETA=0.0028;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 169245795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.894;BRSQ=0.753;LDAF=0.1431;AVGPOST=0.9260;RSQ=0.8382;ERATE=0.0005;THETA=0.0007;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 169245802 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.890;BRSQ=0.730;LDAF=0.1422;AVGPOST=0.9170;RSQ=0.8117;ERATE=0.0017;THETA=0.0005;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 169245840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.893;LDAF=0.2341;AVGPOST=0.9278;RSQ=0.8961;ERATE=0.0037;THETA=0.0004;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 169245841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.486;LDAF=0.0092;AVGPOST=0.9915;RSQ=0.6230;ERATE=0.0009;THETA=0.0045;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169245887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.674;LDAF=0.0057;AVGPOST=0.9925;RSQ=0.4719;ERATE=0.0006;THETA=0.0060;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169245934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.642;LDAF=0.0094;AVGPOST=0.9903;RSQ=0.6043;ERATE=0.0005;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169245941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.957;LDAF=0.2345;AVGPOST=0.9633;RSQ=0.9502;ERATE=0.0019;THETA=0.0092;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 169245974 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0149;AVGPOST=0.9967;RSQ=0.9267;ERATE=0.0003;THETA=0.0070;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169246027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0256;AVGPOST=0.9884;RSQ=0.8490;ERATE=0.0013;THETA=0.0060;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 169246125 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.443;LDAF=0.0032;AVGPOST=0.9953;RSQ=0.3741;ERATE=0.0010;THETA=0.0100;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169246177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.906;LDAF=0.1845;AVGPOST=0.9550;RSQ=0.9002;ERATE=0.0064;THETA=0.0121;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 169246185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.943;LDAF=0.0414;AVGPOST=0.9962;RSQ=0.9597;ERATE=0.0003;THETA=0.0005;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 169246296 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0074;AVGPOST=0.9970;RSQ=0.8593;ERATE=0.0005;THETA=0.0019;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169246398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0082;AVGPOST=0.9994;RSQ=0.9679;ERATE=0.0002;THETA=0.0029;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169246672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.973;LDAF=0.0805;AVGPOST=0.9943;RSQ=0.9712;ERATE=0.0004;THETA=0.0007;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 169247477 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.339;LDAF=0.0232;AVGPOST=0.9718;RSQ=0.5414;ERATE=0.0008;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169247482 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.399;LDAF=0.0280;AVGPOST=0.9632;RSQ=0.4649;ERATE=0.0024;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169247668 . A AT 462 PASS INDEL;BAVGPOST=0.990;BRSQ=0.706;LDAF=0.0119;AVGPOST=0.9919;RSQ=0.7540;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169247713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7293;ERATE=0.0005;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169247753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.700;LDAF=0.0226;AVGPOST=0.9858;RSQ=0.7503;ERATE=0.0010;THETA=0.0029;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 169247799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0112;AVGPOST=0.9976;RSQ=0.9232;ERATE=0.0004;THETA=0.0027;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169247803 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0193;AVGPOST=0.9978;RSQ=0.9579;ERATE=0.0004;THETA=0.0055;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 169247886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4654;AVGPOST=0.9957;RSQ=0.9941;ERATE=0.0006;THETA=0.0024;AC=1018;AN=2184 GT:DS:GL:BD 0.46611720 0
1 169247919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4107;ERATE=0.0003;THETA=0.0017;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169247957 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1544;AVGPOST=0.9867;RSQ=0.9622;ERATE=0.0007;THETA=0.0013;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 169248036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0056;AVGPOST=0.9986;RSQ=0.9017;ERATE=0.0004;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169248100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.934;LDAF=0.2013;AVGPOST=0.9770;RSQ=0.9606;ERATE=0.0007;THETA=0.0002;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 169248139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0052;AVGPOST=0.9962;RSQ=0.6842;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169248153 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.836;BRSQ=0.718;LDAF=0.6329;AVGPOST=0.9019;RSQ=0.8557;ERATE=0.0015;THETA=0.0005;AC=1427;AN=2184 GT:DS:GL:BD 0.65338826 1
1 169248205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.941;LDAF=0.1483;AVGPOST=0.9763;RSQ=0.9411;ERATE=0.0005;THETA=0.0038;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 169248219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.551;LDAF=0.0048;AVGPOST=0.9943;RSQ=0.5307;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169248225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.8060;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169248235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.951;LDAF=0.4335;AVGPOST=0.9677;RSQ=0.9608;ERATE=0.0005;THETA=0.0008;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 169248237 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0682;AVGPOST=0.9945;RSQ=0.9670;ERATE=0.0004;THETA=0.0005;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 169248244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.950;LDAF=0.3544;AVGPOST=0.9694;RSQ=0.9590;ERATE=0.0004;THETA=0.0004;AC=779;AN=2184 GT:DS:GL:BD 0.35668498 0
1 169248279 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.926;LDAF=0.3612;AVGPOST=0.9717;RSQ=0.9622;ERATE=0.0006;THETA=0.0007;AC=797;AN=2184 GT:DS:GL:BD 0.36492673 0
1 169248309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4399;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169248344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0788;AVGPOST=0.9968;RSQ=0.9830;ERATE=0.0004;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169248383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0056;AVGPOST=0.9980;RSQ=0.8656;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169248406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.527;LDAF=0.0098;AVGPOST=0.9937;RSQ=0.7610;ERATE=0.0007;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169248420 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.908;BRSQ=0.835;LDAF=0.6192;AVGPOST=0.8907;RSQ=0.8374;ERATE=0.0155;THETA=0.0006;AC=1398;AN=2184 GT:DS:GL:BD 0.64010990 1
1 169248486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0026;AVGPOST=0.9963;RSQ=0.4665;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169248585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.941;LDAF=0.2040;AVGPOST=0.9782;RSQ=0.9621;ERATE=0.0008;THETA=0.0037;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 169248615 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0052;AVGPOST=0.9952;RSQ=0.6556;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169248645 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.959;LDAF=0.1682;AVGPOST=0.9935;RSQ=0.9834;ERATE=0.0006;THETA=0.0005;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 169248652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.973;LDAF=0.3855;AVGPOST=0.9926;RSQ=0.9890;ERATE=0.0004;THETA=0.0045;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 169248671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.8297;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169248689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169248783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3882;AVGPOST=0.9936;RSQ=0.9910;ERATE=0.0008;THETA=0.0004;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 169248822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.2083;AVGPOST=0.9893;RSQ=0.9824;ERATE=0.0005;THETA=0.0008;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 169248878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.868;LDAF=0.0113;AVGPOST=0.9964;RSQ=0.8844;ERATE=0.0005;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169248912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.8793;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169248975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0051;AVGPOST=0.9986;RSQ=0.8739;ERATE=0.0004;THETA=0.0036;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169248976 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.2104;AVGPOST=0.9895;RSQ=0.9830;ERATE=0.0007;THETA=0.0003;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 169249020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.2089;AVGPOST=0.9913;RSQ=0.9858;ERATE=0.0003;THETA=0.0004;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 169249057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0036;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0002;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169249075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0002;THETA=0.0019;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169249093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.797;LDAF=0.0050;AVGPOST=0.9987;RSQ=0.9020;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169249153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2034;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0006;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 169249165 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8429;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169249219 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0002;THETA=0.0036;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169249223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9580;ERATE=0.0004;THETA=0.0020;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169249330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169249399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5235;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169249416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1728;AVGPOST=0.9980;RSQ=0.9945;ERATE=0.0006;THETA=0.0003;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 169249420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6557;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169249464 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1716;AVGPOST=0.9983;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169249488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1719;AVGPOST=0.9978;RSQ=0.9940;ERATE=0.0005;THETA=0.0022;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169249582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9704;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169249719 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.926;BRSQ=0.826;LDAF=0.1884;AVGPOST=0.9175;RSQ=0.8390;ERATE=0.0207;THETA=0.0017;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 169249757 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.358;LDAF=0.0314;AVGPOST=0.9681;RSQ=0.6544;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169249765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.377;LDAF=0.0311;AVGPOST=0.9682;RSQ=0.6535;ERATE=0.0002;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 169249769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.377;LDAF=0.0315;AVGPOST=0.9675;RSQ=0.6478;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169249772 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.377;LDAF=0.0327;AVGPOST=0.9656;RSQ=0.6418;ERATE=0.0003;THETA=0.0052;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 169249841 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.856;LDAF=0.0513;AVGPOST=0.9806;RSQ=0.8377;ERATE=0.0007;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 169250056 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0226;AVGPOST=0.9990;RSQ=0.9809;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 169250067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.893;BRSQ=0.814;LDAF=0.3200;AVGPOST=0.9231;RSQ=0.8885;ERATE=0.0008;THETA=0.0005;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 169250068 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.759;LDAF=0.1219;AVGPOST=0.9417;RSQ=0.8609;ERATE=0.0005;THETA=0.0014;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 169250119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1717;AVGPOST=0.9973;RSQ=0.9935;ERATE=0.0004;THETA=0.0005;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 169250293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0800;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169250528 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8122;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169250583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0775;AVGPOST=0.9988;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169250657 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9205;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169250769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0048;AVGPOST=0.9979;RSQ=0.8317;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169250827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8577;ERATE=0.0003;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169250924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6602;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169250979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2075;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0002;THETA=0.0006;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 169250991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1696;AVGPOST=0.9986;RSQ=0.9963;ERATE=0.0003;THETA=0.0022;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 169251020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169251126 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1694;AVGPOST=0.9994;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 169251242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3876;AVGPOST=0.9949;RSQ=0.9925;ERATE=0.0012;THETA=0.0003;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 169251272 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0045;AVGPOST=0.9951;RSQ=0.6198;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169251286 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5367;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169251371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1719;AVGPOST=0.9988;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169251379 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7283;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169251386 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8803;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169251394 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0647;AVGPOST=0.9990;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 169251472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.966;LDAF=0.1189;AVGPOST=0.9972;RSQ=0.9881;ERATE=0.0004;THETA=0.0009;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 169251499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7693;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169251502 . A AGTTTGT 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169251592 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8681;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169251757 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9580;ERATE=0.0002;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169251829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.5707;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169251930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6583;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169252065 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169252257 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169252284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0094;AVGPOST=0.9979;RSQ=0.9108;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169252401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8774;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169252463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8083;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169252535 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169252592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9795;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169252740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7115;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169252763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1173;AVGPOST=0.9973;RSQ=0.9911;ERATE=0.0003;THETA=0.0001;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 169252804 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0159;AVGPOST=0.9990;RSQ=0.9791;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169253019 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3860;AVGPOST=0.9970;RSQ=0.9952;ERATE=0.0007;THETA=0.0017;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 169253059 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5844;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169253070 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7972;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169253116 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8462;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169253160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2034;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 169253189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9994;RSQ=0.9836;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169253207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169253291 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169253304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169253349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0024;AVGPOST=0.9965;RSQ=0.5184;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169253356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169253369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0051;AVGPOST=0.9977;RSQ=0.8182;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169253417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169253471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7155;AVGPOST=0.9972;RSQ=0.9944;ERATE=0.0004;THETA=0.0006;AC=1564;AN=2184 GT:DS:GL:BD 0.71611720 1
1 169253506 . AG A 2031 PASS INDEL;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0112;AVGPOST=0.9991;RSQ=0.9663;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169253513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169253608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169253636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6846;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169253642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8845;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169253701 . C CT 166 PASS INDEL;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7891;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169253730 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169253760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6446;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169253884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3888;AVGPOST=0.9962;RSQ=0.9944;ERATE=0.0007;THETA=0.0006;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 169253890 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6171;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169253910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169253970 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0133;AVGPOST=0.9996;RSQ=0.9869;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169253984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.941;LDAF=0.4612;AVGPOST=0.9492;RSQ=0.9325;ERATE=0.0133;THETA=0.0002;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 169254064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5379;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169254099 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.1991;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 169254151 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0433;AVGPOST=0.9976;RSQ=0.9750;ERATE=0.0003;THETA=0.0016;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 169254307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169254382 . A AT 54 PASS INDEL;BAVGPOST=0.981;BRSQ=0.509;LDAF=0.0389;AVGPOST=0.9506;RSQ=0.4823;ERATE=0.0113;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169254426 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169254482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8820;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169254485 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0223;AVGPOST=0.9990;RSQ=0.9835;ERATE=0.0002;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 169254507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1016;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 169254572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9591;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169254599 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169254727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1016;AVGPOST=0.9992;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 169254829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0814;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 169255020 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3876;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 169255192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4650;AVGPOST=0.9990;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 169255423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7307;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169255665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.714;LDAF=0.0044;AVGPOST=0.9973;RSQ=0.7478;ERATE=0.0004;THETA=0.0031;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169255739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6231;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169255791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.464;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.4241;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169255807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7782;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169256097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.965;LDAF=0.3842;AVGPOST=0.9862;RSQ=0.9804;ERATE=0.0013;THETA=0.0007;AC=842;AN=2184 GT:DS:GL:BD 0.38553113 0
1 169256183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5938;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169256289 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8048;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169256341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1718;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0002;THETA=0.0003;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169256356 rs5778611 G GA 43657 PASS INDEL;BAVGPOST=0.986;BRSQ=0.977;LDAF=0.4857;AVGPOST=0.9938;RSQ=0.9916;ERATE=0.0007;THETA=0.0006;AC=1063;AN=2184 GT:DS:GL:BD 0.48672161 0
1 169256359 . A AG 6863 PASS INDEL;BAVGPOST=0.921;BRSQ=0.868;LDAF=0.4153;AVGPOST=0.9220;RSQ=0.8955;ERATE=0.0075;THETA=0.0006;AC=932;AN=2184 GT:DS:GL:BD 0.42673993 0
1 169256501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1696;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0002;THETA=0.0002;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 169256524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1015;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0011;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 169256570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169256574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169256665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169256672 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169256789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1181;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0002;THETA=0.0003;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 169256810 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169256873 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9069;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169256978 rs79943301 GTTAA G 29836 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2154;AVGPOST=0.9969;RSQ=0.9942;ERATE=0.0006;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169257201 . AAC A 2755 PASS INDEL;BAVGPOST=0.976;BRSQ=0.944;LDAF=0.1806;AVGPOST=0.9748;RSQ=0.9532;ERATE=0.0004;THETA=0.0005;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 169257202 . ACAC A 9940 PASS INDEL;BAVGPOST=0.976;BRSQ=0.943;LDAF=0.1800;AVGPOST=0.9726;RSQ=0.9479;ERATE=0.0006;THETA=0.0005;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 169257203 rs72150850 CACA C 25353 PASS INDEL;BAVGPOST=0.980;BRSQ=0.960;LDAF=0.2027;AVGPOST=0.9835;RSQ=0.9749;ERATE=0.0003;THETA=0.0005;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 169257207 . AC A 1179 PASS INDEL;BAVGPOST=0.964;BRSQ=0.916;LDAF=0.1773;AVGPOST=0.9624;RSQ=0.9327;ERATE=0.0011;THETA=0.0046;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 169257243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6827;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169257424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7168;AVGPOST=0.9982;RSQ=0.9961;ERATE=0.0005;THETA=0.0003;AC=1567;AN=2184 GT:DS:GL:BD 0.71749085 1
1 169257434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169257471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169257501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7280;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169257531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9128;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169257650 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169257720 . GA G 96 PASS INDEL;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7259;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169257750 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1731;AVGPOST=0.9980;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 169257763 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0164;AVGPOST=0.9986;RSQ=0.9703;ERATE=0.0002;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 169257809 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6127;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169257865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169257866 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5195;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169257876 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2157;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169257947 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9738;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169258050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6267;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169258148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169258166 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169258178 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169258201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0880;AVGPOST=0.9987;RSQ=0.9942;ERATE=0.0004;THETA=0.0009;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 169258218 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7258;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169258306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3875;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 169258391 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169258396 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169258843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7160;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=1565;AN=2184 GT:DS:GL:BD 0.71657509 1
1 169258984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169259154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.719;LDAF=0.0062;AVGPOST=0.9975;RSQ=0.8348;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169259214 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3873;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0005;THETA=0.0004;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 169259215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5953;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169259496 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3881;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0006;THETA=0.0005;AC=848;AN=2184 GT:DS:GL:BD 0.38827839 0
1 169259716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5894;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169259810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169259903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1766;AVGPOST=0.9986;RSQ=0.9962;ERATE=0.0005;THETA=0.0004;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 169260033 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1695;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 169260035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0036;AVGPOST=0.9974;RSQ=0.7322;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169260118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4903;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169260157 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5110;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169260408 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169260534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8529;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169260578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1675;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 169260628 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5647;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169260704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0777;AVGPOST=0.9991;RSQ=0.9948;ERATE=0.0004;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169260741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.903;LDAF=0.0170;AVGPOST=0.9963;RSQ=0.9124;ERATE=0.0004;THETA=0.0011;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 169260855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7431;ERATE=0.0002;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169260906 rs71121753 AT A 772 PASS INDEL;BAVGPOST=0.865;BRSQ=0.450;LDAF=0.1329;AVGPOST=0.8655;RSQ=0.5760;ERATE=0.0083;THETA=0.0005;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 169261146 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4979;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169261253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6305;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169261277 . G GAT 50 PASS INDEL;BAVGPOST=0.996;BRSQ=0.685;LDAF=0.0105;AVGPOST=0.9874;RSQ=0.5206;ERATE=0.0029;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169261311 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1181;AVGPOST=0.9979;RSQ=0.9918;ERATE=0.0003;THETA=0.0005;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 169261356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3875;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0011;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 169261389 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5142;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169261403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0138;AVGPOST=0.9990;RSQ=0.9701;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169261408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8754;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169261636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169261637 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169261686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6967;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169261745 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8319;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169262083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1718;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0004;THETA=0.0014;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169262130 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8190;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169262348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7169;AVGPOST=0.9985;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=1567;AN=2184 GT:DS:GL:BD 0.71749085 1
1 169262372 rs71557657 AAAAT A 29130 PASS INDEL;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.2041;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 169262442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0053;AVGPOST=0.9980;RSQ=0.8706;ERATE=0.0002;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169262481 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2170;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0005;THETA=0.0006;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 169262523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5810;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169262627 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0003;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169262800 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7612;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169262821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5515;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169262933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5055;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169263181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0107;AVGPOST=0.9992;RSQ=0.9643;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169263210 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.540;LDAF=0.0027;AVGPOST=0.9959;RSQ=0.4264;ERATE=0.0007;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169263262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8538;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169263343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169263546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1016;AVGPOST=0.9996;RSQ=0.9981;ERATE=0.0002;THETA=0.0005;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 169263614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1715;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0005;THETA=0.0005;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169263642 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169263658 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1719;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0002;THETA=0.0003;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169263727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169263733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.9008;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169263928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.0316;AVGPOST=0.9979;RSQ=0.9702;ERATE=0.0003;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 169264037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0636;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0002;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 169264107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0806;AVGPOST=0.9982;RSQ=0.9902;ERATE=0.0004;THETA=0.0002;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169264310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.960;LDAF=0.0877;AVGPOST=0.9985;RSQ=0.9920;ERATE=0.0004;THETA=0.0004;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 169264352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4621;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169264366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169264487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1719;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169264690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4656;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169264705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.5278;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169264916 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3877;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0004;THETA=0.0004;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 169265000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169265095 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8693;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169265173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9041;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169265209 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9103;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169265246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169265306 rs57433982 T TA 10326 PASS INDEL;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.1018;AVGPOST=0.9986;RSQ=0.9935;ERATE=0.0004;THETA=0.0003;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 169265394 . C CA 19 PASS INDEL;BAVGPOST=0.993;BRSQ=0.548;LDAF=0.0129;AVGPOST=0.9822;RSQ=0.4842;ERATE=0.0024;THETA=0.0022;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169265413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.903;LDAF=0.0296;AVGPOST=0.9935;RSQ=0.9192;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169265459 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169265488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0182;AVGPOST=0.9987;RSQ=0.9671;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 169265552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1727;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0003;THETA=0.0006;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 169265564 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1717;AVGPOST=0.9986;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169265635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169265644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6548;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169265683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9741;ERATE=0.0002;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169265706 . C CT 23480 PASS INDEL;BAVGPOST=0.975;BRSQ=0.947;LDAF=0.6819;AVGPOST=0.9458;RSQ=0.9106;ERATE=0.0115;THETA=0.0002;AC=1511;AN=2184 GT:DS:GL:BD 0.69184983 1
1 169265709 . A AT 23568 PASS INDEL;BAVGPOST=0.982;BRSQ=0.960;LDAF=0.6886;AVGPOST=0.9571;RSQ=0.9270;ERATE=0.0121;THETA=0.0004;AC=1521;AN=2184 GT:DS:GL:BD 0.69642860 1
1 169265753 . TCTATCTATA T 3130 PASS INDEL;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0159;AVGPOST=0.9992;RSQ=0.9785;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169265763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5304;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169265794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0795;AVGPOST=0.9992;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 169265836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7177;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=1569;AN=2184 GT:DS:GL:BD 0.71840662 1
1 169265987 rs71121755 CAGGCT C 32814 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1708;AVGPOST=0.9978;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 169266057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1723;AVGPOST=0.9988;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169266077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8995;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169266078 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0040;AVGPOST=0.9986;RSQ=0.8751;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169266130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7174;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0004;THETA=0.0001;AC=1568;AN=2184 GT:DS:GL:BD 0.71794873 1
1 169266154 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169266234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6947;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169266361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2179;AVGPOST=0.9967;RSQ=0.9940;ERATE=0.0006;THETA=0.0003;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 169266431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0085;AVGPOST=0.9975;RSQ=0.8804;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169266517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169266783 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169266981 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.8800;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169267105 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0216;AVGPOST=0.9995;RSQ=0.9896;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169267213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8793;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169267262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.815;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9720;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169267405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9840;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169267422 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7169;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=1567;AN=2184 GT:DS:GL:BD 0.71749085 1
1 169267591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0777;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169267600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169267703 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169267766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169267827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169268023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0795;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 169268077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1719;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0002;THETA=0.0003;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 169268306 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169268355 . AC A 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5687;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169268520 . AT A 46 PASS INDEL;BAVGPOST=0.985;BRSQ=0.395;LDAF=0.0228;AVGPOST=0.9697;RSQ=0.4723;ERATE=0.0035;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169268554 . AG A 39 PASS INDEL;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0028;AVGPOST=0.9975;RSQ=0.6316;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169268604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5841;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169268692 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0663;AVGPOST=0.9993;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 169268731 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9458;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169268755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7068;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169268812 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1157;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 169268995 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169269009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3885;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0007;THETA=0.0003;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 169269108 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169269137 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169269185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9744;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169269380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0787;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169269388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0133;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0002;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169269460 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169269472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6265;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169269557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0808;AVGPOST=0.9971;RSQ=0.9866;ERATE=0.0003;THETA=0.0002;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 169269588 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0058;AVGPOST=0.9948;RSQ=0.6329;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169269619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1725;AVGPOST=0.9990;RSQ=0.9972;ERATE=0.0005;THETA=0.0004;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 169269645 . A AG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7830;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169269670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4595;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169269691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3853;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=841;AN=2184 GT:DS:GL:BD 0.38507327 0
1 169269696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4913;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169269741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3881;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 169269745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5470;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169269885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8923;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169270065 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169270208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0032;AVGPOST=0.9965;RSQ=0.6026;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169270240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1694;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0004;THETA=0.0032;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 169270303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4659;AVGPOST=0.9980;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=1019;AN=2184 GT:DS:GL:BD 0.46657509 0
1 169270413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0002;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169270532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9663;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169270540 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0663;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0002;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 169270553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7764;AVGPOST=0.9979;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=1696;AN=2184 GT:DS:GL:BD 0.77655679 1
1 169270637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.7094;AVGPOST=0.9934;RSQ=0.9875;ERATE=0.0009;THETA=0.0003;AC=1554;AN=2184 GT:DS:GL:BD 0.71153843 1
1 169270660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0732;AVGPOST=0.9986;RSQ=0.9912;ERATE=0.0003;THETA=0.0004;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 169270702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8832;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169270744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0920;AVGPOST=0.9985;RSQ=0.9923;ERATE=0.0004;THETA=0.0003;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 169270790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169270993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4664;AVGPOST=0.9979;RSQ=0.9969;ERATE=0.0006;THETA=0.0005;AC=1019;AN=2184 GT:DS:GL:BD 0.46657509 0
1 169271020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1692;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0007;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 169271130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0817;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0002;THETA=0.0002;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 169271159 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.6942;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169271188 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4872;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169271286 . CT C 943 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169271306 rs34045951 G GA 21782 PASS INDEL;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1689;AVGPOST=0.9972;RSQ=0.9928;ERATE=0.0004;THETA=0.0006;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 169271307 . AT A 497 PASS INDEL;BAVGPOST=0.951;BRSQ=0.578;LDAF=0.0676;AVGPOST=0.9392;RSQ=0.6453;ERATE=0.0055;THETA=0.0003;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 169271316 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.932;LDAF=0.1496;AVGPOST=0.9756;RSQ=0.9248;ERATE=0.0061;THETA=0.0003;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 169271317 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.905;LDAF=0.2295;AVGPOST=0.9541;RSQ=0.9035;ERATE=0.0078;THETA=0.0003;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 169271369 rs60511307 AAC A 49932 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4635;AVGPOST=0.9955;RSQ=0.9941;ERATE=0.0005;THETA=0.0030;AC=1014;AN=2184 GT:DS:GL:BD 0.46428570 0
1 169271597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8173;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169271615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9994;RSQ=0.9811;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169271735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0002;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169271866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169271902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1446;AVGPOST=0.9986;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 169271903 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6785;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169271983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169272107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9856;ERATE=0.0003;THETA=0.0056;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169272143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169272167 . AC A 276 PASS INDEL;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0045;AVGPOST=0.9970;RSQ=0.7266;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169272202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169272299 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2687;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 169272360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169272437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169272450 . A ATG 27150 PASS INDEL;BAVGPOST=0.974;BRSQ=0.690;LDAF=0.9376;AVGPOST=0.9438;RSQ=0.6311;ERATE=0.0089;THETA=0.0002;AC=2084;AN=2184 GT:DS:GL:BD 0.95421243 1
1 169272451 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.9800;AVGPOST=0.9996;RSQ=0.9918;ERATE=0.0002;THETA=0.0003;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 169272453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.9799;AVGPOST=0.9996;RSQ=0.9913;ERATE=0.0002;THETA=0.0005;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 169272631 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9866;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169272834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169272835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8995;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169272862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0160;AVGPOST=0.9990;RSQ=0.9740;ERATE=0.0005;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169272886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0093;AVGPOST=0.9966;RSQ=0.8567;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169272935 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0083;AVGPOST=0.9979;RSQ=0.9067;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169272942 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0047;AVGPOST=0.9953;RSQ=0.5792;ERATE=0.0008;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169272982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0807;AVGPOST=0.9967;RSQ=0.9827;ERATE=0.0005;THETA=0.0004;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 169273020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.7165;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0003;THETA=0.0008;AC=1565;AN=2184 GT:DS:GL:BD 0.71657509 1
1 169273054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.6972;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169273151 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6286;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169273205 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0224;AVGPOST=0.9987;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 169273318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4350;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169273323 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5023;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169273332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.7865;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169273369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8782;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169273378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169273400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0642;AVGPOST=0.9968;RSQ=0.9803;ERATE=0.0004;THETA=0.0010;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 169273510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169273521 . CT C 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7600;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169273694 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169273745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0064;AVGPOST=0.9994;RSQ=0.9576;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169273758 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169273795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8546;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169273808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1582;AVGPOST=0.9957;RSQ=0.9889;ERATE=0.0005;THETA=0.0001;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 169273856 . TTATTA T 179 PASS INDEL;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4807;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169274012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8479;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169274628 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9138;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169274636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169274677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7337;ERATE=0.0003;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169274725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5592;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169274761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169274833 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169274864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0073;AVGPOST=0.9959;RSQ=0.7848;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169274897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169275015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169275272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2160;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0004;THETA=0.0005;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169275332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0146;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0002;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169275440 . G GTA 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6583;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169275571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4791;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169275630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1696;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 169275738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169275748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169275812 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169275832 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169275927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169276143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2689;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0007;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 169276182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9194;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169276334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7852;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169276365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169276373 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169276402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1311;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 169276462 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0120;AVGPOST=0.9988;RSQ=0.9659;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169276539 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5637;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169276782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0632;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 169276816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.8054;AVGPOST=0.9973;RSQ=0.9929;ERATE=0.0004;THETA=0.0003;AC=1761;AN=2184 GT:DS:GL:BD 0.80631870 1
1 169276870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0002;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169276887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.3261;ERATE=0.0004;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169276889 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5893;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169276891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169276903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7879;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169276912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6174;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169276986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.7188;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169277012 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2685;AVGPOST=0.9976;RSQ=0.9950;ERATE=0.0007;THETA=0.0005;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 169277213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.816;LDAF=0.0160;AVGPOST=0.9875;RSQ=0.7250;ERATE=0.0007;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169277255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.917;LDAF=0.0735;AVGPOST=0.9888;RSQ=0.9305;ERATE=0.0014;THETA=0.0003;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 169277446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9534;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169277512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8215;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169277724 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169277826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169277829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6004;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169277835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169277908 . C CT 5068 PASS INDEL;BAVGPOST=0.989;BRSQ=0.796;LDAF=0.0245;AVGPOST=0.9935;RSQ=0.8969;ERATE=0.0004;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 169277909 . T TA 524 PASS INDEL;BAVGPOST=0.988;BRSQ=0.781;LDAF=0.0252;AVGPOST=0.9902;RSQ=0.8452;ERATE=0.0006;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 169278080 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5013;AVGPOST=0.9981;RSQ=0.9975;ERATE=0.0003;THETA=0.0007;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 169278476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0159;AVGPOST=0.9993;RSQ=0.9818;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169278526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7974;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169278710 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8750;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169278909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169278910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9074;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169279081 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0002;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169279122 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169279158 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169279181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169279239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169279337 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169279368 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169279442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0146;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0002;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169279450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169279666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0144;AVGPOST=0.9987;RSQ=0.9664;ERATE=0.0002;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169279707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2682;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0005;THETA=0.0006;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 169279710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0142;AVGPOST=0.9989;RSQ=0.9754;ERATE=0.0002;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169279758 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0617;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0002;THETA=0.0003;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 169279930 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169280031 . A AC 34 PASS INDEL;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6318;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169280108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9509;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169280253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5017;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0006;THETA=0.0003;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 169280319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0096;AVGPOST=0.9979;RSQ=0.9140;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169280379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169280384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.2165;AVGPOST=0.9963;RSQ=0.9935;ERATE=0.0004;THETA=0.0004;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 169280525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8492;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169280556 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4011;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169280579 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0680;AVGPOST=0.9962;RSQ=0.9760;ERATE=0.0008;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 169280626 . C CA 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7442;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169280642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.2673;AVGPOST=0.9964;RSQ=0.9930;ERATE=0.0007;THETA=0.0005;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 169280699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9657;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169280914 . T TA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169281006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9846;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169281036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2693;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0006;THETA=0.0003;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169281238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7169;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=1567;AN=2184 GT:DS:GL:BD 0.71749085 1
1 169281283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0133;AVGPOST=0.9994;RSQ=0.9802;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169281331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169281580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9726;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169281644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169281661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169281711 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0136;AVGPOST=0.9993;RSQ=0.9802;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169281717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169281789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8665;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169281977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169281991 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169282204 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.1981;AVGPOST=0.9976;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 169282279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169282280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169282580 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0782;AVGPOST=0.9988;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169282593 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7952;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169282596 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6969;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169282684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0155;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169282753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8044;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169282808 . T TC 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5336;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169283031 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0012;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169283033 . CTG C 401 PASS INDEL;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0069;AVGPOST=0.9927;RSQ=0.5921;ERATE=0.0010;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169283192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1693;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 169283312 rs60756563 T TGAAA 104809 PASS INDEL;BAVGPOST=0.976;BRSQ=0.961;LDAF=0.4549;AVGPOST=0.9714;RSQ=0.9606;ERATE=0.0054;THETA=0.0006;AC=995;AN=2184 GT:DS:GL:BD 0.45558608 0
1 169283313 rs34889848 G GAAAC 37345 PASS INDEL;BAVGPOST=0.974;BRSQ=0.958;LDAF=0.4509;AVGPOST=0.9751;RSQ=0.9647;ERATE=0.0038;THETA=0.0002;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 169283355 . T TA 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.6918;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169283393 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0160;AVGPOST=0.9979;RSQ=0.9494;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169283512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0782;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 169283540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0681;AVGPOST=0.9984;RSQ=0.9894;ERATE=0.0005;THETA=0.0014;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 169283674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0785;AVGPOST=0.9993;RSQ=0.9957;ERATE=0.0003;THETA=0.0027;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 169283697 . GA G 77 PASS INDEL;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5030;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169283719 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6320;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169283796 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9044;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169283909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7160;AVGPOST=0.9974;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=1567;AN=2184 GT:DS:GL:BD 0.71749085 1
1 169284126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2041;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0001;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 169284312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0789;AVGPOST=0.9986;RSQ=0.9933;ERATE=0.0003;THETA=0.0007;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 169284349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0035;AVGPOST=0.9967;RSQ=0.6378;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169284371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169284469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5702;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169284482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0631;AVGPOST=0.9993;RSQ=0.9944;ERATE=0.0004;THETA=0.0003;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 169284720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9087;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169284751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0027;AVGPOST=0.9958;RSQ=0.3955;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169284783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0042;AVGPOST=0.9948;RSQ=0.5539;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169284964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7170;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=1567;AN=2184 GT:DS:GL:BD 0.71749085 1
1 169285147 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3261;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169285222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6397;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169285312 . TGAA T 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0040;AVGPOST=0.9968;RSQ=0.7085;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169285394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5576;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169285416 . A AAAAT 537 PASS INDEL;BAVGPOST=0.998;BRSQ=0.690;LDAF=0.0123;AVGPOST=0.9847;RSQ=0.4942;ERATE=0.0014;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169285467 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4807;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169285485 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2707;AVGPOST=0.9959;RSQ=0.9930;ERATE=0.0007;THETA=0.0005;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 169285583 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169285750 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169286124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169286133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8202;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169286168 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0164;AVGPOST=0.9985;RSQ=0.9646;ERATE=0.0002;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 169286425 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1696;AVGPOST=0.9987;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 169286471 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169286687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0141;AVGPOST=0.9985;RSQ=0.9512;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169286724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169286785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2690;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 169286792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2689;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 169286814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169286863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0132;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169287085 . G GCT 896 PASS INDEL;BAVGPOST=0.997;BRSQ=0.749;LDAF=0.0092;AVGPOST=0.9969;RSQ=0.8614;ERATE=0.0008;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169287096 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5298;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169287125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169287160 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7172;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=1567;AN=2184 GT:DS:GL:BD 0.71749085 1
1 169287216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1158;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0002;THETA=0.0003;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 169287255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169287257 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.6126;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169287324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9830;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169287348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5911;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169287443 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169287543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169287573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9886;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169287726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.974;LDAF=0.1978;AVGPOST=0.9983;RSQ=0.9950;ERATE=0.0006;THETA=0.0004;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 169287846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0157;AVGPOST=0.9996;RSQ=0.9886;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169288098 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0067;AVGPOST=0.9981;RSQ=0.8977;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169288217 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.746;LDAF=0.0058;AVGPOST=0.9987;RSQ=0.8992;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169288259 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.842;LDAF=0.0258;AVGPOST=0.9872;RSQ=0.8038;ERATE=0.0015;THETA=0.0009;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 169288440 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169288504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169288507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4292;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169288770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.998;LDAF=0.5012;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0005;THETA=0.0002;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 169288780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169288835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9370;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169288913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169288922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9638;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169288929 . A AT 174 PASS INDEL;BAVGPOST=0.997;BRSQ=0.666;LDAF=0.0045;AVGPOST=0.9977;RSQ=0.8020;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169288946 . C CA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4327;ERATE=0.0009;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169289029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169289111 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1698;AVGPOST=0.9982;RSQ=0.9949;ERATE=0.0006;THETA=0.0004;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 169289206 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169289319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169289323 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0048;AVGPOST=0.9969;RSQ=0.7544;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169289585 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169289723 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7181;AVGPOST=0.9968;RSQ=0.9932;ERATE=0.0008;THETA=0.0003;AC=1568;AN=2184 GT:DS:GL:BD 0.71794873 1
1 169289733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5742;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169289778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8685;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169289826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0157;AVGPOST=0.9993;RSQ=0.9816;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169289993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6591;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169290007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0642;AVGPOST=0.9991;RSQ=0.9928;ERATE=0.0003;THETA=0.0006;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 169290043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8519;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169290099 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7411;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169290330 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.845;LDAF=0.0298;AVGPOST=0.9907;RSQ=0.8728;ERATE=0.0005;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 169290481 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0060;AVGPOST=0.9994;RSQ=0.9540;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169290589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6636;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169290669 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0002;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169290684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169290688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6246;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169290746 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169290768 . AC A 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5939;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169290842 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169291043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6626;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169291143 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.728;LDAF=0.0059;AVGPOST=0.9958;RSQ=0.7189;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169291151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9806;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169291205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2693;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 169291222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0054;AVGPOST=0.9989;RSQ=0.9432;ERATE=0.0002;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169291259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8517;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169291360 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8172;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169291396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8710;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169291397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169291459 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7473;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169291617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169291623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0056;AVGPOST=0.9960;RSQ=0.7492;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169291624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169291665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169291693 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5601;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169291735 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4421;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169291773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6628;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169291819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.724;LDAF=0.0050;AVGPOST=0.9979;RSQ=0.8298;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169291926 rs72184479 A ATG 1167 PASS INDEL;BAVGPOST=0.929;BRSQ=0.739;LDAF=0.1657;AVGPOST=0.9340;RSQ=0.8232;ERATE=0.0045;THETA=0.0004;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 169291966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9131;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169292020 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5817;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169292137 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0002;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169292170 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8520;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169292355 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8198;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169292501 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169292573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169292575 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169292616 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0012;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169292621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169292840 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2690;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0004;THETA=0.0005;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 169292861 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0052;AVGPOST=0.9990;RSQ=0.9292;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169292908 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4340;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169292916 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0664;AVGPOST=0.9994;RSQ=0.9953;ERATE=0.0002;THETA=0.0003;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 169292934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7909;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169293132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5068;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169293152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4325;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169293179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7675;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169293214 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.965;LDAF=0.1170;AVGPOST=0.9968;RSQ=0.9864;ERATE=0.0006;THETA=0.0003;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 169293217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1743;AVGPOST=0.9915;RSQ=0.9789;ERATE=0.0008;THETA=0.0006;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 169293273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9986;RSQ=0.9000;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169293396 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8143;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169293420 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169293521 . T TAC 1620 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9985;RSQ=0.9572;ERATE=0.0006;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169293531 . CAT C 6 PASS INDEL;BAVGPOST=0.971;BRSQ=0.115;LDAF=0.0612;AVGPOST=0.9223;RSQ=0.4703;ERATE=0.0035;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 169293575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169293674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169293721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2688;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0002;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 169293782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169293801 . TCA T 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7434;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169293826 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2157;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169293840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2157;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169293988 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8143;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169294044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169294285 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0109;AVGPOST=0.9988;RSQ=0.9514;ERATE=0.0002;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169294316 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0156;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0002;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169294373 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169294395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0002;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169294463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169294518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7762;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169294535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9318;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169294638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0137;AVGPOST=0.9991;RSQ=0.9745;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169294658 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169294778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2159;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169294799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2084;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0002;THETA=0.0003;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 169294863 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7721;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169294872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0157;AVGPOST=0.9996;RSQ=0.9903;ERATE=0.0003;THETA=0.0013;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169294976 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4848;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0006;THETA=0.0001;AC=1060;AN=2184 GT:DS:GL:BD 0.48534799 0
1 169294994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2166;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 169294998 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6837;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169295090 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4872;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169295151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5754;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169295314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5504;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169295590 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6573;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169295689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0654;AVGPOST=0.9992;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 169295815 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169295827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2039;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 169295842 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0781;AVGPOST=0.9994;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 169295953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1180;AVGPOST=0.9988;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 169295974 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169296101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9400;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169296208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169296214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169296496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2682;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 169296499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2683;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0002;THETA=0.0002;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 169296588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0080;AVGPOST=0.9990;RSQ=0.9511;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169296665 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5103;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169296666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0781;AVGPOST=0.9992;RSQ=0.9953;ERATE=0.0003;THETA=0.0006;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 169296696 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8148;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169296744 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1979;AVGPOST=0.9990;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 169296864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.960;LDAF=0.9523;AVGPOST=0.9962;RSQ=0.9668;ERATE=0.0005;THETA=0.0003;AC=2081;AN=2184 GT:DS:GL:BD 0.95283884 1
1 169296973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0136;AVGPOST=0.9990;RSQ=0.9689;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169296994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169297001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169297163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7060;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169297235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9301;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169297288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169297306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7033;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169297307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2684;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0002;THETA=0.0003;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 169297623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5561;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169297633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5272;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169297653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0782;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 169297772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5277;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169297828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0146;AVGPOST=0.9980;RSQ=0.9567;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169297953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6651;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169298012 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0002;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169298055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169298060 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5670;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169298128 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9694;ERATE=0.0002;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169298240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169298423 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.970;LDAF=0.3997;AVGPOST=0.9834;RSQ=0.9730;ERATE=0.0026;THETA=0.0004;AC=870;AN=2184 GT:DS:GL:BD 0.39835164 0
1 169298428 . AAATCTGATCT A 2218 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0128;AVGPOST=0.9990;RSQ=0.9667;ERATE=0.0003;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169298434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7849;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169298662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0136;AVGPOST=0.9988;RSQ=0.9595;ERATE=0.0005;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169298702 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.6287;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169298755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169298782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8377;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169298791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.733;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.5099;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169298919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5509;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169298937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8265;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169299075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7696;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169299090 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169299236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169299281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169299314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8704;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169299343 . CA C 1880 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9909;ERATE=0.0002;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169299494 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7137;AVGPOST=0.9910;RSQ=0.9837;ERATE=0.0022;THETA=0.0008;AC=1564;AN=2184 GT:DS:GL:BD 0.71611720 1
1 169299562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.6069;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169299581 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8576;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169299642 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0207;AVGPOST=0.9996;RSQ=0.9921;ERATE=0.0004;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 169299681 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.457;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6152;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169299699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0678;AVGPOST=0.9971;RSQ=0.9821;ERATE=0.0005;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 169299708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5538;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169299798 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.729;LDAF=0.0081;AVGPOST=0.9966;RSQ=0.8298;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169299841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.736;LDAF=0.0130;AVGPOST=0.9936;RSQ=0.8061;ERATE=0.0006;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169299872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0782;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 169299932 . TAAA T 2032 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9809;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169299954 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2037;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0002;THETA=0.0004;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 169300184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0094;AVGPOST=0.9973;RSQ=0.8964;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169300241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9556;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169300522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2159;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0004;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 169300550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6574;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169300607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5455;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169300655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169300724 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2142;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 169300798 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169300810 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1184;AVGPOST=0.9983;RSQ=0.9926;ERATE=0.0004;THETA=0.0003;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 169300818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2687;AVGPOST=0.9975;RSQ=0.9948;ERATE=0.0007;THETA=0.0003;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 169300962 . C CAAATA 639 PASS INDEL;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8694;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169301097 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0782;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 169301175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1178;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 169301176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.827;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9253;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169301313 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7581;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169301333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1317;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 169301351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.752;LDAF=0.0050;AVGPOST=0.9967;RSQ=0.7756;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169301403 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.8938;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169301415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0035;AVGPOST=0.9957;RSQ=0.5550;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169301498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0106;AVGPOST=0.9973;RSQ=0.8923;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169301608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169301819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169301954 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0125;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0002;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169302026 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169302034 . CT C 244 PASS INDEL;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5638;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169302040 . TC T 120 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6277;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169302089 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0068;AVGPOST=0.9996;RSQ=0.9760;ERATE=0.0002;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169302114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9587;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169302473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169302489 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169302628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8978;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169302644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2082;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0006;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 169302691 . ATAACT A 883 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9187;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169302701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8558;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169302747 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.913;LDAF=0.1374;AVGPOST=0.9809;RSQ=0.9337;ERATE=0.0041;THETA=0.0006;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 169302884 . AT A 6420 PASS INDEL;BAVGPOST=0.818;BRSQ=0.573;LDAF=0.2604;AVGPOST=0.8186;RSQ=0.6351;ERATE=0.0491;THETA=0.0005;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 169302888 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.975;LDAF=0.4890;AVGPOST=0.9732;RSQ=0.9621;ERATE=0.0065;THETA=0.0010;AC=1066;AN=2184 GT:DS:GL:BD 0.48809522 0
1 169303060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.822;LDAF=0.0098;AVGPOST=0.9978;RSQ=0.9009;ERATE=0.0003;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169303072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7169;AVGPOST=0.9981;RSQ=0.9959;ERATE=0.0006;THETA=0.0002;AC=1567;AN=2184 GT:DS:GL:BD 0.71749085 1
1 169303233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169303335 . ATATCT A 282 PASS INDEL;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6679;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169303395 . A AGT 24477 PASS INDEL;BAVGPOST=0.991;BRSQ=0.980;LDAF=0.2641;AVGPOST=0.9922;RSQ=0.9874;ERATE=0.0005;THETA=0.0005;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 169303396 rs71121762 G GTC 60264 PASS INDEL;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.2664;AVGPOST=0.9934;RSQ=0.9897;ERATE=0.0004;THETA=0.0002;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 169303669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0175;AVGPOST=0.9977;RSQ=0.9527;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 169303752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2688;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 169303916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169303921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6542;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169304120 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6250;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169304451 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0077;AVGPOST=0.9984;RSQ=0.9110;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169304556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4634;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169304824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9402;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169304858 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.974;LDAF=0.2680;AVGPOST=0.9926;RSQ=0.9879;ERATE=0.0007;THETA=0.0002;AC=589;AN=2184 GT:DS:GL:BD 0.26968864 0
1 169304945 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.915;LDAF=0.1720;AVGPOST=0.9921;RSQ=0.9788;ERATE=0.0007;THETA=0.0009;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 169304955 . TTAAA T 377 PASS INDEL;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0199;AVGPOST=0.9856;RSQ=0.7194;ERATE=0.0013;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 169305027 . GAT G 8535 PASS INDEL;BAVGPOST=0.981;BRSQ=0.182;LDAF=0.9732;AVGPOST=0.9668;RSQ=0.5247;ERATE=0.0024;THETA=0.0002;AC=2148;AN=2184 GT:DS:GL:BD 0.98351645 1
1 169305206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4723;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169305234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0032;AVGPOST=0.9970;RSQ=0.5849;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169305269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.960;LDAF=0.2667;AVGPOST=0.9939;RSQ=0.9892;ERATE=0.0005;THETA=0.0004;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 169305302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2167;AVGPOST=0.9964;RSQ=0.9932;ERATE=0.0006;THETA=0.0004;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 169305348 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.545;LDAF=0.0070;AVGPOST=0.9925;RSQ=0.5728;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169305368 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8152;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169305394 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0024;AVGPOST=0.9964;RSQ=0.4406;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169305395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0049;AVGPOST=0.9983;RSQ=0.8743;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169305397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169305429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0795;AVGPOST=0.9978;RSQ=0.9873;ERATE=0.0004;THETA=0.0002;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 169305435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.948;LDAF=0.1181;AVGPOST=0.9969;RSQ=0.9866;ERATE=0.0004;THETA=0.0003;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 169305468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.901;LDAF=0.4390;AVGPOST=0.9524;RSQ=0.9294;ERATE=0.0054;THETA=0.0003;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 169305513 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1184;AVGPOST=0.9966;RSQ=0.9859;ERATE=0.0006;THETA=0.0003;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 169305554 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5699;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169305728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0102;AVGPOST=0.9980;RSQ=0.9349;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169305856 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.2032;AVGPOST=0.9941;RSQ=0.9900;ERATE=0.0005;THETA=0.0006;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 169305949 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8778;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169306013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2687;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 169306087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0066;AVGPOST=0.9967;RSQ=0.8010;ERATE=0.0004;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169306467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.639;LDAF=0.0047;AVGPOST=0.9956;RSQ=0.6208;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169306549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.472;LDAF=0.0175;AVGPOST=0.9801;RSQ=0.5527;ERATE=0.0014;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169306665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0057;AVGPOST=0.9977;RSQ=0.8143;ERATE=0.0007;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169306722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.597;LDAF=0.0297;AVGPOST=0.9840;RSQ=0.7911;ERATE=0.0007;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 169306822 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0038;AVGPOST=0.9977;RSQ=0.7970;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169307025 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5579;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169307153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169307293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9996;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169307310 . AT A 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0012;AVGPOST=0.9982;RSQ=0.3072;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169307349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7765;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169307372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169307519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169307618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6996;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169307892 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6440;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169308143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7531;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169308180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9866;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169308205 . GTCTC G 371 PASS INDEL;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.8043;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169308227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6780;ERATE=0.0006;THETA=0.0039;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169308368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6709;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169308376 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.916;LDAF=0.0194;AVGPOST=0.9982;RSQ=0.9634;ERATE=0.0004;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 169308424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2675;AVGPOST=0.9965;RSQ=0.9935;ERATE=0.0007;THETA=0.0051;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 169308434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=0.9990;RSQ=0.9727;ERATE=0.0002;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169308441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0160;AVGPOST=0.9983;RSQ=0.9623;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169308465 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.906;LDAF=0.0176;AVGPOST=0.9959;RSQ=0.9034;ERATE=0.0003;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 169308714 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1184;AVGPOST=0.9967;RSQ=0.9872;ERATE=0.0005;THETA=0.0004;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 169308778 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0252;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0003;THETA=0.0020;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 169308798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169308893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0002;THETA=0.0129;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169308906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169308975 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0059;AVGPOST=0.9974;RSQ=0.8443;ERATE=0.0003;THETA=0.0080;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169308990 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7491;ERATE=0.0012;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169309305 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.9079;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169309367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169309437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5611;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169309534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.7212;AVGPOST=0.9932;RSQ=0.9879;ERATE=0.0004;THETA=0.0004;AC=1576;AN=2184 GT:DS:GL:BD 0.72161174 1
1 169309647 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7181;ERATE=0.0016;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169309677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0142;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0002;THETA=0.0031;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169309704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9420;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169310004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7273;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169310005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9764;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169310015 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2245;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0004;THETA=0.0005;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 169310055 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169310145 . TCA T 7139 PASS INDEL;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0769;AVGPOST=0.9992;RSQ=0.9959;ERATE=0.0002;THETA=0.0008;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169310283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0626;AVGPOST=0.9980;RSQ=0.9887;ERATE=0.0003;THETA=0.0009;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169310325 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8869;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169310391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0036;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169310570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.6224;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169310588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6724;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169310795 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169310957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2250;AVGPOST=0.9976;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 169310977 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169311016 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.5991;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169311047 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7824;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169311081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.849;LDAF=0.0449;AVGPOST=0.9873;RSQ=0.8877;ERATE=0.0005;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 169311128 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169311193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9829;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169311195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169311213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169311280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.6836;ERATE=0.0006;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169311356 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0042;AVGPOST=0.9953;RSQ=0.5719;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169311555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7332;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169311661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6455;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169311662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8455;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169311668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.734;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.8982;ERATE=0.0004;THETA=0.0061;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169311744 . CAT C 1655 PASS INDEL;BAVGPOST=0.960;BRSQ=0.777;LDAF=0.0847;AVGPOST=0.9457;RSQ=0.7390;ERATE=0.0030;THETA=0.0005;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 169311756 . GTA G 1471 PASS INDEL;BAVGPOST=0.890;BRSQ=0.786;LDAF=0.2404;AVGPOST=0.8994;RSQ=0.8252;ERATE=0.0036;THETA=0.0011;AC=510;AN=2184 GT:DS:GL:BD 0.23351648 0
1 169311763 rs113174913 TATAC T 12235 PASS INDEL;BAVGPOST=0.893;BRSQ=0.788;LDAF=0.2470;AVGPOST=0.9108;RSQ=0.8450;ERATE=0.0028;THETA=0.0005;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 169311767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.896;BRSQ=0.794;LDAF=0.2640;AVGPOST=0.8774;RSQ=0.8039;ERATE=0.0037;THETA=0.0007;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 169311783 . GTA G 176 PASS INDEL;BAVGPOST=0.883;BRSQ=0.187;LDAF=0.1100;AVGPOST=0.8894;RSQ=0.5569;ERATE=0.0037;THETA=0.0004;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 169311790 . TATATATAC T 1866 PASS INDEL;BAVGPOST=0.916;BRSQ=0.316;LDAF=0.0857;AVGPOST=0.9273;RSQ=0.6379;ERATE=0.0038;THETA=0.0004;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 169311814 . G GTA 2759 PASS INDEL;BAVGPOST=0.825;BRSQ=0.362;LDAF=0.2023;AVGPOST=0.7962;RSQ=0.5200;ERATE=0.0111;THETA=0.0032;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 169311835 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.835;BRSQ=0.372;LDAF=0.1875;AVGPOST=0.8148;RSQ=0.5231;ERATE=0.0131;THETA=0.0031;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 169311864 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.797;BRSQ=0.436;LDAF=0.2757;AVGPOST=0.7925;RSQ=0.6146;ERATE=0.0116;THETA=0.0007;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 169311879 . T TATAC 185 PASS INDEL;BAVGPOST=0.920;BRSQ=0.074;LDAF=0.1036;AVGPOST=0.8511;RSQ=0.3687;ERATE=0.0075;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 169311902 . A AG 226 PASS INDEL;BAVGPOST=0.911;BRSQ=0.093;LDAF=0.1881;AVGPOST=0.7224;RSQ=0.2514;ERATE=0.0210;THETA=0.0008;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 169311904 rs66937303 AG A 247 PASS INDEL;BAVGPOST=0.893;BRSQ=0.082;LDAF=0.1644;AVGPOST=0.7502;RSQ=0.2514;ERATE=0.0188;THETA=0.0010;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 169311924 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.868;BRSQ=0.100;LDAF=0.1225;AVGPOST=0.8374;RSQ=0.4061;ERATE=0.0061;THETA=0.0009;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 169311939 . T TATAC 195 PASS INDEL;BAVGPOST=0.913;BRSQ=0.042;LDAF=0.0761;AVGPOST=0.8942;RSQ=0.4351;ERATE=0.0037;THETA=0.0006;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 169311953 rs71719894 CAT C 295 PASS INDEL;BAVGPOST=0.786;BRSQ=0.056;LDAF=0.1999;AVGPOST=0.7461;RSQ=0.3461;ERATE=0.0156;THETA=0.0012;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 169311965 rs68140977 GTATA G 1585 PASS INDEL;BAVGPOST=0.713;BRSQ=0.068;LDAF=0.2430;AVGPOST=0.6793;RSQ=0.2657;ERATE=0.0237;THETA=0.0007;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 169311992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.069;LDAF=0.0832;AVGPOST=0.8742;RSQ=0.3762;ERATE=0.0052;THETA=0.0008;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 169311994 rs66574141 G GTATA 248 PASS INDEL;BAVGPOST=0.871;BRSQ=0.053;LDAF=0.0767;AVGPOST=0.8924;RSQ=0.4031;ERATE=0.0046;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 169312013 rs66865311 CAT C 138 PASS INDEL;BAVGPOST=0.846;BRSQ=0.060;LDAF=0.1891;AVGPOST=0.7630;RSQ=0.3942;ERATE=0.0124;THETA=0.0005;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 169312044 rs71121765 CAT C 525 PASS INDEL;BAVGPOST=0.770;BRSQ=0.090;LDAF=0.1869;AVGPOST=0.7834;RSQ=0.4351;ERATE=0.0121;THETA=0.0084;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 169312055 . AG A 60 PASS INDEL;BAVGPOST=0.947;BRSQ=0.106;LDAF=0.0982;AVGPOST=0.8749;RSQ=0.4403;ERATE=0.0055;THETA=0.0012;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 169312056 . GTA G 90 PASS INDEL;BAVGPOST=0.678;BRSQ=0.011;LDAF=0.2366;AVGPOST=0.6749;RSQ=0.2553;ERATE=0.0211;THETA=0.0007;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 169312075 rs66598236 CAT C 4476 PASS INDEL;BAVGPOST=0.587;BRSQ=0.203;LDAF=0.3861;AVGPOST=0.6804;RSQ=0.4435;ERATE=0.0271;THETA=0.0010;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 169312084 . A AG 2297 PASS INDEL;BAVGPOST=0.808;BRSQ=0.168;LDAF=0.2068;AVGPOST=0.7527;RSQ=0.3910;ERATE=0.0218;THETA=0.0003;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 169312092 rs34714244 T TATAC 803 PASS INDEL;BAVGPOST=0.910;BRSQ=0.238;LDAF=0.1292;AVGPOST=0.8474;RSQ=0.4698;ERATE=0.0064;THETA=0.0007;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 169312118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.888;BRSQ=0.333;LDAF=0.1478;AVGPOST=0.8653;RSQ=0.5819;ERATE=0.0056;THETA=0.0005;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 169312123 rs71740322 TAC T 7546 PASS INDEL;BAVGPOST=0.790;BRSQ=0.524;LDAF=0.3183;AVGPOST=0.8008;RSQ=0.6645;ERATE=0.0101;THETA=0.0004;AC=648;AN=2184 GT:DS:GL:BD 0.29670331 0
1 169312125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.775;BRSQ=0.487;LDAF=0.3365;AVGPOST=0.7620;RSQ=0.5906;ERATE=0.0234;THETA=0.0005;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 169312139 rs72226716 CAT C 2055 PASS INDEL;BAVGPOST=0.923;BRSQ=0.298;LDAF=0.1081;AVGPOST=0.8810;RSQ=0.5244;ERATE=0.0077;THETA=0.0027;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 169312151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.887;BRSQ=0.740;LDAF=0.2851;AVGPOST=0.8231;RSQ=0.6920;ERATE=0.0137;THETA=0.0024;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 169312151 . GTA G 8396 PASS INDEL;BAVGPOST=0.964;BRSQ=0.091;LDAF=0.9488;AVGPOST=0.9410;RSQ=0.5261;ERATE=0.0024;THETA=0.0004;AC=2100;AN=2184 GT:DS:GL:BD 0.96153843 1
1 169312153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.889;LDAF=0.1583;AVGPOST=0.9475;RSQ=0.8517;ERATE=0.0027;THETA=0.0028;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 169312164 . T TAC 971 PASS INDEL;BAVGPOST=0.969;BRSQ=0.745;LDAF=0.1043;AVGPOST=0.9268;RSQ=0.6940;ERATE=0.0044;THETA=0.0004;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 169312166 rs71768960 CAA C 6783 PASS INDEL;BAVGPOST=0.975;BRSQ=0.945;LDAF=0.2364;AVGPOST=0.9487;RSQ=0.9164;ERATE=0.0016;THETA=0.0006;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 169312168 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.851;BRSQ=0.371;LDAF=0.0776;AVGPOST=0.9161;RSQ=0.5497;ERATE=0.0035;THETA=0.0007;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 169312434 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0775;AVGPOST=0.9981;RSQ=0.9888;ERATE=0.0003;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169312544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169312589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9552;ERATE=0.0002;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169312710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5741;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169312732 . T TC 221 PASS INDEL;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0132;AVGPOST=0.9984;RSQ=0.9532;ERATE=0.0004;THETA=0.0023;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169312733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0137;AVGPOST=0.9973;RSQ=0.9286;ERATE=0.0004;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169312751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0635;AVGPOST=0.9943;RSQ=0.9586;ERATE=0.0008;THETA=0.0003;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 169312766 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.286;LDAF=0.0032;AVGPOST=0.9946;RSQ=0.2727;ERATE=0.0009;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169312818 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7403;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169312985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.700;LDAF=0.0140;AVGPOST=0.9921;RSQ=0.7735;ERATE=0.0007;THETA=0.0038;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169313136 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0054;AVGPOST=0.9997;RSQ=0.9769;ERATE=0.0002;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169313391 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0772;AVGPOST=0.9993;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169313395 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169313495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5755;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169313594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0092;AVGPOST=0.9994;RSQ=0.9680;ERATE=0.0003;THETA=0.0013;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169313678 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7236;AVGPOST=0.9963;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=1582;AN=2184 GT:DS:GL:BD 0.72435898 1
1 169313681 . A AT 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5711;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169313682 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.968;LDAF=0.1257;AVGPOST=0.9965;RSQ=0.9887;ERATE=0.0005;THETA=0.0005;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 169313830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6881;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169313836 . TA T 630 PASS INDEL;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0067;AVGPOST=0.9974;RSQ=0.8514;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169313874 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169313892 rs71121768 A AT 36190 PASS INDEL;BAVGPOST=0.987;BRSQ=0.983;LDAF=0.2550;AVGPOST=0.9892;RSQ=0.9823;ERATE=0.0008;THETA=0.0005;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 169313898 . T TC 1376 PASS INDEL;BAVGPOST=0.902;BRSQ=0.725;LDAF=0.1616;AVGPOST=0.9252;RSQ=0.8295;ERATE=0.0008;THETA=0.0007;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 169313920 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8358;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169313967 . TC T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6698;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169314035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0148;AVGPOST=0.9991;RSQ=0.9748;ERATE=0.0002;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169314361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169314393 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9124;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169314430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.921;LDAF=0.9533;AVGPOST=0.9965;RSQ=0.9696;ERATE=0.0004;THETA=0.0007;AC=2083;AN=2184 GT:DS:GL:BD 0.95375460 1
1 169314491 . A ATATTT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4064;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169314630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.846;LDAF=0.0101;AVGPOST=0.9983;RSQ=0.9329;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169314662 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0002;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169314664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9911;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169314726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2068;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0003;THETA=0.0010;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 169314796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7554;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169314833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2568;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0003;THETA=0.0019;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 169314858 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8540;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169314913 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7644;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169314949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0077;AVGPOST=0.9994;RSQ=0.9704;ERATE=0.0002;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169315246 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6457;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169315304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169315412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9663;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169315527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0776;AVGPOST=0.9986;RSQ=0.9927;ERATE=0.0002;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169315533 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2202;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 169315558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8047;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169315628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0211;AVGPOST=0.9989;RSQ=0.9808;ERATE=0.0003;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 169315657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169315759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169315761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6102;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169315891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7206;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169315906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6807;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169316011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0622;AVGPOST=0.9993;RSQ=0.9943;ERATE=0.0004;THETA=0.0009;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 169316071 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169316104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169316177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169316213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169316232 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6800;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169316309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6027;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169316311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.5379;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169316511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4745;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169316582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0219;AVGPOST=0.9983;RSQ=0.9755;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169316610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2206;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0003;THETA=0.0009;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 169316642 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0160;AVGPOST=0.9987;RSQ=0.9733;ERATE=0.0002;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 169316666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169316678 . TAACA T 1716 PASS INDEL;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0118;AVGPOST=0.9987;RSQ=0.9549;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169316715 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7787;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169316744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0127;AVGPOST=0.9994;RSQ=0.9798;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169316899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5938;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169317020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0117;AVGPOST=0.9989;RSQ=0.9594;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169317143 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.866;LDAF=0.0138;AVGPOST=0.9984;RSQ=0.9484;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169317195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0620;AVGPOST=0.9993;RSQ=0.9945;ERATE=0.0003;THETA=0.0006;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 169317249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9996;RSQ=0.9896;ERATE=0.0003;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169317292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6994;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169317389 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.913;LDAF=0.0327;AVGPOST=0.9967;RSQ=0.9584;ERATE=0.0003;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 169317414 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0772;AVGPOST=0.9988;RSQ=0.9932;ERATE=0.0003;THETA=0.0013;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169317591 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.525;LDAF=0.0049;AVGPOST=0.9950;RSQ=0.5887;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169317592 . C CA 43 PASS INDEL;BAVGPOST=0.994;BRSQ=0.472;LDAF=0.0097;AVGPOST=0.9853;RSQ=0.3944;ERATE=0.0020;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169317661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7373;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169317729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169317787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8894;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169317961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169317962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0784;AVGPOST=0.9973;RSQ=0.9867;ERATE=0.0004;THETA=0.0005;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 169318085 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3903;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169318120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0153;AVGPOST=0.9996;RSQ=0.9897;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169318164 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0203;AVGPOST=0.9983;RSQ=0.9667;ERATE=0.0005;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 169318207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0061;AVGPOST=0.9972;RSQ=0.8214;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169318242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.815;LDAF=0.0186;AVGPOST=0.9969;RSQ=0.9384;ERATE=0.0003;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 169318258 rs34870158 T TA 4677 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0634;AVGPOST=0.9969;RSQ=0.9783;ERATE=0.0005;THETA=0.0008;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 169318379 . C CT 2041 PASS INDEL;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0229;AVGPOST=0.9970;RSQ=0.9512;ERATE=0.0005;THETA=0.0035;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 169318475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0091;AVGPOST=0.9984;RSQ=0.9271;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169318624 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4294;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169318678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4944;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169318919 . T TC 241 PASS INDEL;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.6255;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169318920 . C CT 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0035;AVGPOST=0.9964;RSQ=0.6156;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169319186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7081;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169319286 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4767;AVGPOST=0.9960;RSQ=0.9937;ERATE=0.0003;THETA=0.0011;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 169319333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.629;LDAF=0.0033;AVGPOST=0.9968;RSQ=0.6310;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169319335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7885;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169319369 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7536;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169319370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6914;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169319389 . CAAGA C 41 PASS INDEL;BAVGPOST=0.998;BRSQ=0.698;LDAF=0.0041;AVGPOST=0.9959;RSQ=0.6041;ERATE=0.0015;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169319410 . AGAAAGGAAG A 4840 PASS INDEL;BAVGPOST=0.997;BRSQ=0.937;LDAF=0.0249;AVGPOST=0.9973;RSQ=0.9546;ERATE=0.0005;THETA=0.0011;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 169319483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.898;BRSQ=0.731;LDAF=0.4665;AVGPOST=0.8762;RSQ=0.7304;ERATE=0.0893;THETA=0.0003;AC=991;AN=2184 GT:DS:GL:BD 0.45375457 0
1 169319556 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5874;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169319643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169319723 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0064;AVGPOST=0.9981;RSQ=0.8809;ERATE=0.0004;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169319948 . TA T 591 PASS INDEL;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9003;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169319983 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8564;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169320020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.817;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9589;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169320192 MERGED_DEL_2_6240 AAAAACATTTTCCTGTTTCCTTTTTTCTTTCTTTTTTTTCTTTTTTCTTTTTCCCCTATTTCTTAACCTATAGTAAGAACCACAGTTTCCATTGGGACCAATACACACCCACACCCACATCCACCCACAACCACACACACACATGCCCTACAACTGGAATAAAATTCTCAAAAACAATTCTTATTCTCAA A . . SV;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6536;ERATE=0.0006;THETA=0.0004;CIEND=-21,132;CIPOS=-120,37;END=169327840;HOMLEN=6;HOMSEQ=AAAACA;SOURCE=BreakDancer_169320186_169 GT:DS:GL:BD 0.00091575 0
1 169320264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9439;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169320283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8902;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169320322 . CCA C 21 PASS INDEL;BAVGPOST=0.994;BRSQ=0.580;LDAF=0.0106;AVGPOST=0.9870;RSQ=0.5180;ERATE=0.0029;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169320377 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169320404 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8318;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169320506 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0085;AVGPOST=0.9993;RSQ=0.9628;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169320764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7338;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169320843 . G GA 203 PASS INDEL;BAVGPOST=0.984;BRSQ=0.545;LDAF=0.0327;AVGPOST=0.9569;RSQ=0.4708;ERATE=0.0095;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 169320861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169320914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9631;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169320950 . AC A 52 PASS INDEL;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8081;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169321084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.600;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7220;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169321092 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4470;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169321266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.721;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8769;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169321347 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0055;AVGPOST=0.9995;RSQ=0.9604;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169321369 . AAAAAG A 192 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0032;AVGPOST=0.9967;RSQ=0.6183;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169321442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0624;AVGPOST=0.9988;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 169321510 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7663;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169321524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169321549 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9588;ERATE=0.0002;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169321767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.922;LDAF=0.0354;AVGPOST=0.9986;RSQ=0.9838;ERATE=0.0003;THETA=0.0007;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 169321884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0053;AVGPOST=0.9989;RSQ=0.9232;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169321996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.798;LDAF=0.0098;AVGPOST=0.9943;RSQ=0.7749;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169322072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6260;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169322175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9993;RSQ=0.9855;ERATE=0.0002;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169322300 . TTA T 6492 PASS INDEL;BAVGPOST=0.982;BRSQ=0.953;LDAF=0.1637;AVGPOST=0.9879;RSQ=0.9687;ERATE=0.0004;THETA=0.0009;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 169322456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8928;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169322494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8668;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169322521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1308;AVGPOST=0.9964;RSQ=0.9872;ERATE=0.0003;THETA=0.0005;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 169322552 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169322563 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169322646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0002;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169322710 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0051;AVGPOST=0.9981;RSQ=0.8800;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169322753 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0038;AVGPOST=0.9976;RSQ=0.7889;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169322849 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7459;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169322928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.548;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.6134;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169322993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0768;AVGPOST=0.9981;RSQ=0.9895;ERATE=0.0003;THETA=0.0002;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 169323001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169323365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.843;LDAF=0.0132;AVGPOST=0.9992;RSQ=0.9718;ERATE=0.0002;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169323542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.7256;AVGPOST=0.9950;RSQ=0.9904;ERATE=0.0003;THETA=0.0006;AC=1586;AN=2184 GT:DS:GL:BD 0.72619045 1
1 169323604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9725;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169323668 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6073;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169323852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.914;LDAF=0.0361;AVGPOST=0.9957;RSQ=0.9477;ERATE=0.0004;THETA=0.0012;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 169323870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169323882 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.324;LDAF=0.0063;AVGPOST=0.9934;RSQ=0.5384;ERATE=0.0010;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169323888 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.455;LDAF=0.0090;AVGPOST=0.9938;RSQ=0.7170;ERATE=0.0010;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169323903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.298;LDAF=0.0064;AVGPOST=0.9908;RSQ=0.4046;ERATE=0.0010;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169323951 rs71121770 C CAT 7835 PASS INDEL;BAVGPOST=0.962;BRSQ=0.889;LDAF=0.1888;AVGPOST=0.9376;RSQ=0.8542;ERATE=0.0033;THETA=0.0007;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 169324007 . TTA T 119 PASS INDEL;BAVGPOST=0.978;BRSQ=0.215;LDAF=0.0577;AVGPOST=0.9152;RSQ=0.4014;ERATE=0.0069;THETA=0.0015;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 169324035 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.081;LDAF=0.0327;AVGPOST=0.9563;RSQ=0.4862;ERATE=0.0022;THETA=0.0017;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 169324048 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.890;BRSQ=0.725;LDAF=0.2111;AVGPOST=0.8850;RSQ=0.7788;ERATE=0.0051;THETA=0.0009;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 169324099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.887;BRSQ=0.719;LDAF=0.1974;AVGPOST=0.9256;RSQ=0.8509;ERATE=0.0020;THETA=0.0005;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 169324112 . CATA C 354 PASS INDEL;BAVGPOST=0.955;BRSQ=0.135;LDAF=0.0695;AVGPOST=0.9122;RSQ=0.4932;ERATE=0.0033;THETA=0.0039;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 169324205 . A AT 867 PASS INDEL;BAVGPOST=0.717;BRSQ=0.106;LDAF=0.2285;AVGPOST=0.7953;RSQ=0.5682;ERATE=0.0088;THETA=0.0005;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 169324208 . TA T 761 PASS INDEL;BAVGPOST=0.695;BRSQ=0.208;LDAF=0.2574;AVGPOST=0.7807;RSQ=0.5705;ERATE=0.0066;THETA=0.0007;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 169324209 . A AT 1337 PASS INDEL;BAVGPOST=0.685;BRSQ=0.199;LDAF=0.2146;AVGPOST=0.8589;RSQ=0.7088;ERATE=0.0023;THETA=0.0015;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 169324217 . ATGT A 1043 PASS INDEL;BAVGPOST=0.686;BRSQ=0.174;LDAF=0.2371;AVGPOST=0.7982;RSQ=0.5839;ERATE=0.0088;THETA=0.0006;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 169324225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.736;BRSQ=0.087;LDAF=0.2003;AVGPOST=0.8189;RSQ=0.5786;ERATE=0.0062;THETA=0.0006;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 169324233 . TA T 887 PASS INDEL;BAVGPOST=0.679;BRSQ=0.146;LDAF=0.2247;AVGPOST=0.8038;RSQ=0.5892;ERATE=0.0079;THETA=0.0029;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 169324298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.644;BRSQ=0.053;LDAF=0.2559;AVGPOST=0.7117;RSQ=0.3684;ERATE=0.0144;THETA=0.0011;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 169324323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.770;BRSQ=0.030;LDAF=0.1419;AVGPOST=0.7815;RSQ=0.2761;ERATE=0.0077;THETA=0.0008;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 169324328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.304;BRSQ=0.026;LDAF=0.3412;AVGPOST=0.6324;RSQ=0.3159;ERATE=0.0231;THETA=0.0006;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 169324358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.472;BRSQ=0.013;LDAF=0.2671;AVGPOST=0.6975;RSQ=0.3513;ERATE=0.0179;THETA=0.0021;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 169324383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.726;BRSQ=0.019;LDAF=0.1619;AVGPOST=0.7776;RSQ=0.3453;ERATE=0.0095;THETA=0.0007;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 169324388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.388;BRSQ=0.022;LDAF=0.2323;AVGPOST=0.7316;RSQ=0.3802;ERATE=0.0118;THETA=0.0007;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 169324436 . A ATATAT 870 PASS INDEL;BAVGPOST=0.680;BRSQ=0.035;LDAF=0.2029;AVGPOST=0.7438;RSQ=0.3616;ERATE=0.0074;THETA=0.0006;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 169324441 . TAA T 381 PASS INDEL;BAVGPOST=0.605;BRSQ=0.028;LDAF=0.2228;AVGPOST=0.7126;RSQ=0.3224;ERATE=0.0149;THETA=0.0008;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169324442 rs72066021 AAT A 440 PASS INDEL;BAVGPOST=0.675;BRSQ=0.036;LDAF=0.2631;AVGPOST=0.6633;RSQ=0.2762;ERATE=0.0217;THETA=0.0008;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 169324443 rs72066021 A ATATAT 1582 PASS INDEL;BAVGPOST=0.614;BRSQ=0.038;LDAF=0.2116;AVGPOST=0.7172;RSQ=0.3117;ERATE=0.0172;THETA=0.0029;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 169324462 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.869;BRSQ=0.204;LDAF=0.1854;AVGPOST=0.7695;RSQ=0.4178;ERATE=0.0149;THETA=0.0008;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 169324463 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.882;BRSQ=0.215;LDAF=0.1007;AVGPOST=0.8932;RSQ=0.5929;ERATE=0.0017;THETA=0.0007;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 169324469 . TATATA T 253 PASS INDEL;BAVGPOST=0.886;BRSQ=0.046;LDAF=0.1330;AVGPOST=0.7970;RSQ=0.3124;ERATE=0.0106;THETA=0.0011;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 169324480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.844;BRSQ=0.185;LDAF=0.2131;AVGPOST=0.7651;RSQ=0.4327;ERATE=0.0156;THETA=0.0009;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 169324507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.833;BRSQ=0.251;LDAF=0.1304;AVGPOST=0.9133;RSQ=0.7353;ERATE=0.0015;THETA=0.0007;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 169324514 . T TC 346 PASS INDEL;BAVGPOST=0.904;BRSQ=0.109;LDAF=0.1222;AVGPOST=0.8127;RSQ=0.2873;ERATE=0.0174;THETA=0.0007;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 169324542 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.376;LDAF=0.0326;AVGPOST=0.9718;RSQ=0.6393;ERATE=0.0024;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 169324549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.814;LDAF=0.2048;AVGPOST=0.8911;RSQ=0.7606;ERATE=0.0074;THETA=0.0007;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 169324558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.243;LDAF=0.0433;AVGPOST=0.9553;RSQ=0.5884;ERATE=0.0023;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 169324629 . C CACAT 2162 PASS INDEL;BAVGPOST=0.940;BRSQ=0.606;LDAF=0.1099;AVGPOST=0.9018;RSQ=0.6109;ERATE=0.0093;THETA=0.0006;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 169324691 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0031;AVGPOST=0.9967;RSQ=0.5718;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169324793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.741;LDAF=0.9910;AVGPOST=0.9964;RSQ=0.8576;ERATE=0.0004;THETA=0.0008;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 169324794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0113;AVGPOST=0.9966;RSQ=0.8810;ERATE=0.0005;THETA=0.0014;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169324931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0770;AVGPOST=0.9984;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169324956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9844;ERATE=0.0003;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169324990 . CA C 3928 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0210;AVGPOST=0.9984;RSQ=0.9735;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 169325020 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8488;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169325025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169325032 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9339;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169325071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169325127 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1743;AVGPOST=0.9974;RSQ=0.9945;ERATE=0.0003;THETA=0.0005;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 169325217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169325243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9118;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169325249 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.7295;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169325358 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5592;ERATE=0.0002;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169325496 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9351;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169325644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8780;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169325695 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0205;AVGPOST=0.9996;RSQ=0.9912;ERATE=0.0003;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 169325736 rs35009499 G GA 48 PASS INDEL;BAVGPOST=0.993;BRSQ=0.523;LDAF=0.0148;AVGPOST=0.9804;RSQ=0.4904;ERATE=0.0028;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169325799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0003;THETA=0.0010;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169325811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1715;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0004;THETA=0.0006;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 169325889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169325903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1301;AVGPOST=0.9961;RSQ=0.9860;ERATE=0.0003;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169325904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169325923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4467;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169325938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8735;ERATE=0.0002;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169325973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0216;AVGPOST=0.9996;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169326172 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0068;AVGPOST=0.9968;RSQ=0.7988;ERATE=0.0008;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169326258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9797;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169326264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169326530 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.3991;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169326586 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9285;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169326633 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0216;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169326718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6422;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169326991 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7582;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169327241 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9623;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169327326 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.502;LDAF=0.0098;AVGPOST=0.9869;RSQ=0.4702;ERATE=0.0026;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169327359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4532;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169327363 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3729;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169327483 rs57165408 TATTACA T 58204 PASS INDEL;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.3019;AVGPOST=0.9937;RSQ=0.9914;ERATE=0.0010;THETA=0.0006;AC=665;AN=2184 GT:DS:GL:BD 0.30448717 0
1 169327624 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2119;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0005;THETA=0.0005;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 169327986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169328017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7877;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169328198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0803;AVGPOST=0.9968;RSQ=0.9820;ERATE=0.0004;THETA=0.0008;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 169328258 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5326;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169328403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3018;AVGPOST=0.9986;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 169328442 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7215;AVGPOST=0.9964;RSQ=0.9934;ERATE=0.0005;THETA=0.0003;AC=1576;AN=2184 GT:DS:GL:BD 0.72161174 1
1 169328530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.603;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7976;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169328543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0770;AVGPOST=0.9987;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169328634 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6042;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169328793 rs5778613 TATAG T 4606 PASS INDEL;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0363;AVGPOST=0.9936;RSQ=0.9260;ERATE=0.0006;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 169328915 . CAT C 23 PASS INDEL;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5864;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169328933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6432;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169329207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169329286 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9330;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169329318 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9410;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169329408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9885;ERATE=0.0002;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169329415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169329455 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6571;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169329642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7266;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169329704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169329777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9148;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169329781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8564;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169329790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0621;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0002;THETA=0.0002;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 169329829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8211;ERATE=0.0011;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169329832 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7264;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0007;AC=1587;AN=2184 GT:DS:GL:BD 0.72664833 1
1 169329878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169329929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8805;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169329983 . AC A 3179 PASS INDEL;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0198;AVGPOST=0.9994;RSQ=0.9861;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169330062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1307;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0002;THETA=0.0002;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 169330095 rs112689888 TG T 61674 PASS INDEL;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3995;AVGPOST=0.9929;RSQ=0.9893;ERATE=0.0023;THETA=0.0002;AC=874;AN=2184 GT:DS:GL:BD 0.40018314 0
1 169330201 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7230;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169330352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9349;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169330360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8213;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169330462 . G GA 205 PASS INDEL;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.8106;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169330527 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8602;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169330585 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3023;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 169330623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9994;RSQ=0.9853;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169330926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9857;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169331039 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4001;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 169331080 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4602;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169331157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3024;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0005;THETA=0.0002;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 169331210 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8656;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169331241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.7229;AVGPOST=0.9919;RSQ=0.9853;ERATE=0.0014;THETA=0.0004;AC=1583;AN=2184 GT:DS:GL:BD 0.72481686 1
1 169331332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6845;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169331701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2253;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0004;THETA=0.0001;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 169331802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7265;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=1588;AN=2184 GT:DS:GL:BD 0.72710621 1
1 169331890 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8744;ERATE=0.0003;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169331978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169332073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0031;AVGPOST=0.9978;RSQ=0.7432;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169332102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3023;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 169332157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8368;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169332170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2249;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 169332235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169332274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5395;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169332327 . AT A 826 PASS INDEL;BAVGPOST=0.993;BRSQ=0.937;LDAF=0.0524;AVGPOST=0.9929;RSQ=0.9451;ERATE=0.0006;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 169332328 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.929;LDAF=0.0512;AVGPOST=0.9913;RSQ=0.9336;ERATE=0.0009;THETA=0.0007;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 169332405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.7156;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169332424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4008;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169332528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7442;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169332572 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2249;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0004;THETA=0.0007;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 169332724 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.851;LDAF=0.0098;AVGPOST=0.9953;RSQ=0.8126;ERATE=0.0010;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169332780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0217;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169332848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0622;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 169332898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1742;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0002;THETA=0.0004;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 169332982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169333056 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8616;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169333090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169333122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169333160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.9165;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169333163 . GAC G 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4226;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169333329 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3031;AVGPOST=0.9986;RSQ=0.9982;ERATE=0.0003;THETA=0.0001;AC=664;AN=2184 GT:DS:GL:BD 0.30402932 0
1 169333359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169333388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9800;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169333438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0594;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0002;THETA=0.0004;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 169333642 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8507;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169333645 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6928;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169333774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8640;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169333826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7050;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0002;THETA=0.0002;AC=1540;AN=2184 GT:DS:GL:BD 0.70512819 1
1 169333835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0772;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169333873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0782;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 169334096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0594;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 169334282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7266;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0002;THETA=0.0003;AC=1588;AN=2184 GT:DS:GL:BD 0.72710621 1
1 169334295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9477;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169334395 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169334443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6083;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169334504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169334617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169334673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169334745 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169334925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.7961;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169335034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1305;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 169335035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0773;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169335254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7395;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=1617;AN=2184 GT:DS:GL:BD 0.74038464 1
1 169335288 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169335324 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0050;AVGPOST=0.9985;RSQ=0.8895;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169335347 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7024;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169335607 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169335792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7988;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169335972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8531;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169336118 . A AG 825 PASS INDEL;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0770;AVGPOST=0.9975;RSQ=0.9846;ERATE=0.0006;THETA=0.0004;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169336121 . G GC 5590 PASS INDEL;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0766;AVGPOST=0.9990;RSQ=0.9936;ERATE=0.0004;THETA=0.0003;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 169336149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8811;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169336188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169336213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0086;AVGPOST=0.9974;RSQ=0.8982;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169336259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4422;AVGPOST=0.9975;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 169336327 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9889;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169336340 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4146;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 169336543 . T TC 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169336564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9312;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169336617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1865;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 169336654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169336698 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169336750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0002;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169336755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169336837 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169336848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169336914 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169336983 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7608;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169337063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169337120 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169337191 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169337376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4161;AVGPOST=0.9988;RSQ=0.9982;ERATE=0.0002;THETA=0.0003;AC=909;AN=2184 GT:DS:GL:BD 0.41620880 0
1 169337474 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8975;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169337515 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0623;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0003;THETA=0.0032;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 169337581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8000;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169337638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4423;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0003;AC=966;AN=2184 GT:DS:GL:BD 0.44230768 0
1 169337848 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9302;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169337853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2561;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 169337894 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8226;ERATE=0.0002;THETA=0.0038;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169338046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1856;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 169338052 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0089;AVGPOST=0.9975;RSQ=0.8790;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169338149 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169338198 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9885;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169338213 . CTATTT C 85 PASS INDEL;BAVGPOST=0.998;BRSQ=0.861;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9256;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169338214 . TATTTTA T 616 PASS INDEL;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0065;AVGPOST=0.9988;RSQ=0.9198;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169338318 . ATG A 199 PASS INDEL;BAVGPOST=0.994;BRSQ=0.508;LDAF=0.0108;AVGPOST=0.9868;RSQ=0.5373;ERATE=0.0025;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169338326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.964;LDAF=0.0993;AVGPOST=0.9984;RSQ=0.9926;ERATE=0.0003;THETA=0.0005;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 169338330 . GTA G 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7779;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169338347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169338530 . T TTG 4751 PASS INDEL;BAVGPOST=0.893;BRSQ=0.746;LDAF=0.2386;AVGPOST=0.9007;RSQ=0.8129;ERATE=0.0044;THETA=0.0004;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 169338798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169338834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169338877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169338908 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169339021 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169339031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1308;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0003;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169339067 . T TA 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7170;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169339069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7976;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169339268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4414;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0006;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 169339278 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6672;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169339382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0622;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0002;THETA=0.0004;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 169339471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9350;ERATE=0.0002;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169339486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0086;AVGPOST=0.9989;RSQ=0.9489;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169339516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0270;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169339612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4413;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 169339647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169339670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9203;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169339749 . CA C 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169339779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7948;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169339879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7608;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169339884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.969;LDAF=0.0774;AVGPOST=0.9987;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169339917 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.8177;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169339958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169339983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7392;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169340264 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0118;AVGPOST=0.9990;RSQ=0.9635;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169340320 . CAAGG C 2207 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0151;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169340344 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0273;AVGPOST=0.9992;RSQ=0.9881;ERATE=0.0003;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169340634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.6190;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169340946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169340965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169341068 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6393;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169341072 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3922;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169341220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8096;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169341250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7448;AVGPOST=0.9978;RSQ=0.9950;ERATE=0.0004;THETA=0.0003;AC=1628;AN=2184 GT:DS:GL:BD 0.74542123 1
1 169341261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4414;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 169341309 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0117;AVGPOST=0.9989;RSQ=0.9697;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169341398 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7253;ERATE=0.0012;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169341401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169341455 rs35892142 ACT A 33307 PASS INDEL;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2271;AVGPOST=0.9971;RSQ=0.9949;ERATE=0.0006;THETA=0.0002;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 169341458 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0784;AVGPOST=0.9981;RSQ=0.9893;ERATE=0.0004;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169341581 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5590;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169341607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6910;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169341727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0787;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169341757 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169341936 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169342041 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0779;AVGPOST=0.9989;RSQ=0.9934;ERATE=0.0004;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169342171 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.0274;AVGPOST=0.9956;RSQ=0.9362;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169342204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4380;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169342247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169342609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6848;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169342656 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4411;AVGPOST=0.9977;RSQ=0.9963;ERATE=0.0006;THETA=0.0005;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 169342740 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5372;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169342773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169342821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6315;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169343379 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2121;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0006;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 169343441 . A AG 2433 PASS INDEL;BAVGPOST=0.990;BRSQ=0.934;LDAF=0.0767;AVGPOST=0.9911;RSQ=0.9518;ERATE=0.0006;THETA=0.0006;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 169343442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.956;LDAF=0.0737;AVGPOST=0.9938;RSQ=0.9677;ERATE=0.0004;THETA=0.0009;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 169343511 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.951;LDAF=0.4209;AVGPOST=0.9787;RSQ=0.9693;ERATE=0.0040;THETA=0.0003;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 169343527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0121;AVGPOST=0.9991;RSQ=0.9665;ERATE=0.0003;THETA=0.0001;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169343533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0631;AVGPOST=0.9982;RSQ=0.9876;ERATE=0.0003;THETA=0.0003;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 169343633 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169343754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6440;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169343890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1301;AVGPOST=0.9977;RSQ=0.9921;ERATE=0.0004;THETA=0.0004;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 169344023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4419;AVGPOST=0.9849;RSQ=0.9792;ERATE=0.0021;THETA=0.0004;AC=965;AN=2184 GT:DS:GL:BD 0.44184983 0
1 169344026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4198;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169344081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169344262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0625;AVGPOST=0.9992;RSQ=0.9935;ERATE=0.0003;THETA=0.0002;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 169344263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8237;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169344393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2254;AVGPOST=0.9970;RSQ=0.9948;ERATE=0.0005;THETA=0.0004;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 169344594 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.952;LDAF=0.2357;AVGPOST=0.9770;RSQ=0.9668;ERATE=0.0009;THETA=0.0004;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 169344598 . AC A 14433 PASS INDEL;BAVGPOST=0.994;BRSQ=0.316;LDAF=0.9824;AVGPOST=0.9730;RSQ=0.3836;ERATE=0.0026;THETA=0.0039;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 169344599 . CAT C 1837 PASS INDEL;BAVGPOST=0.986;BRSQ=0.862;LDAF=0.0777;AVGPOST=0.9791;RSQ=0.8834;ERATE=0.0010;THETA=0.0002;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 169344605 rs10535714 TAC T 192 PASS INDEL;BAVGPOST=0.975;BRSQ=0.791;LDAF=0.0898;AVGPOST=0.9612;RSQ=0.8094;ERATE=0.0034;THETA=0.0004;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 169344616 . CAT C 329 PASS INDEL;BAVGPOST=0.996;BRSQ=0.891;LDAF=0.0420;AVGPOST=0.9643;RSQ=0.6744;ERATE=0.0026;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 169344641 . T TA 73 PASS INDEL;BAVGPOST=0.928;BRSQ=0.184;LDAF=0.0926;AVGPOST=0.8674;RSQ=0.3797;ERATE=0.0071;THETA=0.0006;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 169344714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0056;AVGPOST=0.9976;RSQ=0.8046;ERATE=0.0005;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169344735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.459;LDAF=0.0092;AVGPOST=0.9866;RSQ=0.4475;ERATE=0.0014;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169344765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1329;AVGPOST=0.9975;RSQ=0.9904;ERATE=0.0005;THETA=0.0004;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 169344791 . TTATA T 152 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0079;AVGPOST=0.9982;RSQ=0.9062;ERATE=0.0005;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169344792 . TATATA T 259 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0067;AVGPOST=0.9979;RSQ=0.8872;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169344793 . ATATAT A 723 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0067;AVGPOST=0.9979;RSQ=0.8812;ERATE=0.0006;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169344830 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9741;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169345048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0075;AVGPOST=0.9987;RSQ=0.9203;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169345054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0618;AVGPOST=0.9965;RSQ=0.9751;ERATE=0.0007;THETA=0.0003;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 169345117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8435;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169345153 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5661;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169345320 . C CA 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169345347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169345481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4416;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0006;THETA=0.0004;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 169345524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169345628 . CAT C 49 PASS INDEL;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7194;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169345659 . A AT 53 PASS INDEL;BAVGPOST=0.979;BRSQ=0.489;LDAF=0.0389;AVGPOST=0.9486;RSQ=0.4680;ERATE=0.0112;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 169345704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4415;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0009;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 169345733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169345794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9557;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169345808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169345868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2262;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 169345883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169346051 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169346081 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169346083 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169346256 . T TA 181 PASS INDEL;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5495;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169346260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0002;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169346293 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169346403 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169346452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169346504 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8145;ERATE=0.0002;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169346528 rs35085160 AT A 29363 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1869;AVGPOST=0.9972;RSQ=0.9931;ERATE=0.0005;THETA=0.0006;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 169346536 . G GC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169346579 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169346615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0636;AVGPOST=0.9977;RSQ=0.9853;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 169346627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8270;ERATE=0.0004;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169346690 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8514;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169346730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9464;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169346749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0246;AVGPOST=0.9990;RSQ=0.9848;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 169346750 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0249;AVGPOST=0.9990;RSQ=0.9841;ERATE=0.0002;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 169346937 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7820;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169346956 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169346999 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169347019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8014;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169347254 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169347298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169347411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169347462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169347545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2057;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0002;THETA=0.0005;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 169347615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169347617 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169347680 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169347686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169347800 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169347813 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169347922 rs111563824 TCA T 969 PASS INDEL;BAVGPOST=0.997;BRSQ=0.871;LDAF=0.0133;AVGPOST=0.9978;RSQ=0.9233;ERATE=0.0006;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169347953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7277;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169348052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169348235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169348434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.963;LDAF=0.0844;AVGPOST=0.9965;RSQ=0.9808;ERATE=0.0003;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 169348442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169348472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169348516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4416;AVGPOST=0.9978;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 169348633 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.7212;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169348665 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4413;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0006;THETA=0.0003;AC=963;AN=2184 GT:DS:GL:BD 0.44093406 0
1 169348678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.5999;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169348744 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8121;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169348767 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6378;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169348885 . A AT 54 PASS INDEL;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0050;AVGPOST=0.9941;RSQ=0.5283;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169348903 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4423;AVGPOST=0.9968;RSQ=0.9952;ERATE=0.0008;THETA=0.0003;AC=965;AN=2184 GT:DS:GL:BD 0.44184983 0
1 169349199 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8278;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169349250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4355;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169349255 . CAT C 116 PASS INDEL;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0022;AVGPOST=0.9972;RSQ=0.4254;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169349311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0007;AVGPOST=0.9988;RSQ=0.3167;ERATE=0.0005;THETA=0.0037;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169349323 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.940;LDAF=0.4036;AVGPOST=0.9748;RSQ=0.9655;ERATE=0.0007;THETA=0.0004;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 169349323 . TC T 16717 PASS INDEL;BAVGPOST=0.964;BRSQ=0.943;LDAF=0.4038;AVGPOST=0.9763;RSQ=0.9670;ERATE=0.0008;THETA=0.0002;AC=885;AN=2184 GT:DS:GL:BD 0.40521979 0
1 169349324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.941;LDAF=0.4052;AVGPOST=0.9743;RSQ=0.9651;ERATE=0.0006;THETA=0.0003;AC=883;AN=2184 GT:DS:GL:BD 0.40430403 0
1 169349324 . C CGT 15560 PASS INDEL;BAVGPOST=0.961;BRSQ=0.939;LDAF=0.4043;AVGPOST=0.9734;RSQ=0.9628;ERATE=0.0006;THETA=0.0047;AC=885;AN=2184 GT:DS:GL:BD 0.40521979 0
1 169349608 rs3830533 C CTA 93603 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7242;AVGPOST=0.9933;RSQ=0.9883;ERATE=0.0009;THETA=0.0004;AC=1582;AN=2184 GT:DS:GL:BD 0.72435898 1
1 169349700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169349809 . A AC 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169349811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169349823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169349914 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1283;AVGPOST=0.9994;RSQ=0.9980;ERATE=0.0002;THETA=0.0003;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 169350003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0626;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0002;THETA=0.0002;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169350005 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9902;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169350225 . T TG 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5170;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169350308 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.771;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8781;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169350309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7305;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=1596;AN=2184 GT:DS:GL:BD 0.73076922 1
1 169350332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8162;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169350393 rs61426691 GA G 799 PASS INDEL;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0133;AVGPOST=0.9990;RSQ=0.9664;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169350433 . A AG 32 PASS INDEL;BAVGPOST=0.991;BRSQ=0.540;LDAF=0.0152;AVGPOST=0.9800;RSQ=0.4726;ERATE=0.0030;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169350434 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9451;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169350435 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169350577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169350726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7435;AVGPOST=0.9940;RSQ=0.9891;ERATE=0.0005;THETA=0.0003;AC=1625;AN=2184 GT:DS:GL:BD 0.74404764 1
1 169351275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169351333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169351544 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169351558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169351596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7455;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0003;AC=1629;AN=2184 GT:DS:GL:BD 0.74587911 1
1 169351629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169351680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9808;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169351819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4417;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0005;THETA=0.0003;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 169351992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2061;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 169352019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169352066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2263;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0008;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 169352219 . AT A 367 PASS INDEL;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0046;AVGPOST=0.9970;RSQ=0.7601;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169352247 . CTT C 2045 PASS INDEL;BAVGPOST=0.995;BRSQ=0.850;LDAF=0.0117;AVGPOST=0.9970;RSQ=0.9011;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169352266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6956;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169352350 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8371;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169352516 . CT C 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169352652 . TA T 116 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169352685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9651;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169352787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0636;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 169352865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2121;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0005;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 169352878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6752;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169352903 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.9105;ERATE=0.0002;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169352962 rs71557664 TAG T 42719 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2067;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0004;THETA=0.0002;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 169353078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0768;AVGPOST=0.9994;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 169353100 . G GA 643 PASS INDEL;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0056;AVGPOST=0.9977;RSQ=0.8413;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169353106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169353122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169353184 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6708;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169353198 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6925;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169353295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4418;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 169353332 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169353368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6157;ERATE=0.0010;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169353385 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169353427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169353483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1272;AVGPOST=0.9978;RSQ=0.9919;ERATE=0.0005;THETA=0.0002;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 169353534 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9081;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169353686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169353691 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9702;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169353692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1306;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0004;THETA=0.0002;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169353963 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169353964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4960;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169354024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169354031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1308;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169354051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.7305;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0006;THETA=0.0003;AC=1596;AN=2184 GT:DS:GL:BD 0.73076922 1
1 169354122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5340;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169354336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4415;AVGPOST=0.9974;RSQ=0.9963;ERATE=0.0006;THETA=0.0002;AC=963;AN=2184 GT:DS:GL:BD 0.44093406 0
1 169354390 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0270;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169354394 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169354406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0050;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169354444 . C CA 13 PASS INDEL;BAVGPOST=0.981;BRSQ=0.043;LDAF=0.0470;AVGPOST=0.9300;RSQ=0.3971;ERATE=0.0026;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 169354540 . CTT C 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8356;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169354543 . CAAGGTG C 243 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8330;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169354622 . TC T 127 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0033;AVGPOST=0.9970;RSQ=0.6645;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169354829 . A AT 61 PASS INDEL;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5224;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169355085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1270;AVGPOST=0.9987;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 169355110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.913;LDAF=0.0202;AVGPOST=0.9959;RSQ=0.9253;ERATE=0.0002;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169355208 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7590;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169355312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9214;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169355314 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9321;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169355380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0270;AVGPOST=0.9990;RSQ=0.9827;ERATE=0.0004;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169355529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0628;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0002;THETA=0.0003;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169355694 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169355835 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.940;LDAF=0.1011;AVGPOST=0.9930;RSQ=0.9699;ERATE=0.0006;THETA=0.0003;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 169356004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0314;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0002;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 169356013 . TA T 25 PASS INDEL;BAVGPOST=0.995;BRSQ=0.822;LDAF=0.0179;AVGPOST=0.9935;RSQ=0.8501;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169356020 rs35976841 AT A 2029 PASS INDEL;BAVGPOST=0.996;BRSQ=0.880;LDAF=0.0173;AVGPOST=0.9947;RSQ=0.8717;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169356216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169356298 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169356309 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169356327 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169356389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169356426 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169356427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169356461 . A AC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6340;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169356548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169356593 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169356833 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7449;AVGPOST=0.9983;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=1628;AN=2184 GT:DS:GL:BD 0.74542123 1
1 169356877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7591;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169356933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5917;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169357139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7530;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169357142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6151;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169357144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0769;AVGPOST=0.9968;RSQ=0.9829;ERATE=0.0004;THETA=0.0001;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 169357164 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169357290 . TA T 75 PASS INDEL;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0020;AVGPOST=0.9971;RSQ=0.4023;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169357307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6549;ERATE=0.0005;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169357388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0077;AVGPOST=0.9978;RSQ=0.8854;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169357547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6723;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169357562 rs112425935 TC T 90 PASS INDEL;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7932;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169357736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0253;AVGPOST=0.9977;RSQ=0.9663;ERATE=0.0002;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 169357866 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1434;AVGPOST=0.9978;RSQ=0.9932;ERATE=0.0003;THETA=0.0018;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 169358044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7666;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169358097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4550;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169358316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0066;AVGPOST=0.9957;RSQ=0.7244;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169358341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0082;AVGPOST=0.9968;RSQ=0.8538;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169358342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.968;LDAF=0.7346;AVGPOST=0.9777;RSQ=0.9603;ERATE=0.0019;THETA=0.0005;AC=1617;AN=2184 GT:DS:GL:BD 0.74038464 1
1 169358359 rs35710783 C CA 5224 PASS INDEL;BAVGPOST=0.956;BRSQ=0.773;LDAF=0.1329;AVGPOST=0.9073;RSQ=0.6720;ERATE=0.0213;THETA=0.0002;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 169358424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1422;AVGPOST=0.9975;RSQ=0.9925;ERATE=0.0004;THETA=0.0003;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 169358430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0031;AVGPOST=0.9969;RSQ=0.6143;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169358562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169358710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9125;ERATE=0.0002;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169358811 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7295;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0003;THETA=0.0007;AC=1595;AN=2184 GT:DS:GL:BD 0.73031133 1
1 169358876 . TA T 302 PASS INDEL;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7654;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169358891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5216;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169358902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169359032 . CA C 144 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169359063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6983;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169359082 . CA C 1308 PASS INDEL;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0143;AVGPOST=0.9986;RSQ=0.9563;ERATE=0.0005;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169359089 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0137;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169359222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5235;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169359332 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169359440 rs78958517 CAAT C 90427 PASS INDEL;BAVGPOST=0.993;BRSQ=0.962;LDAF=0.9494;AVGPOST=0.9933;RSQ=0.9403;ERATE=0.0005;THETA=0.0008;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 169359512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0123;AVGPOST=0.9973;RSQ=0.9148;ERATE=0.0006;THETA=0.0001;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169359529 . TA T 509 PASS INDEL;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0089;AVGPOST=0.9956;RSQ=0.8276;ERATE=0.0006;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169359592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0002;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169359654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4409;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0005;THETA=0.0003;AC=962;AN=2184 GT:DS:GL:BD 0.44047618 0
1 169359882 . AAGGG A 1317 PASS INDEL;BAVGPOST=0.997;BRSQ=0.832;LDAF=0.0124;AVGPOST=0.9944;RSQ=0.8206;ERATE=0.0004;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169359940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.685;LDAF=0.0084;AVGPOST=0.9926;RSQ=0.6720;ERATE=0.0007;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169359961 . AT A 272 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8072;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169360141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.921;LDAF=0.0488;AVGPOST=0.9912;RSQ=0.9289;ERATE=0.0003;THETA=0.0007;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 169360395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.7051;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169360423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0051;AVGPOST=0.9936;RSQ=0.5718;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169360469 . AAAC A 384 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7137;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169360507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5296;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169360555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9511;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169360738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8052;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169360751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169360758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0039;AVGPOST=0.9959;RSQ=0.6643;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169360766 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169360799 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169360920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169360955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5295;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169360958 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0360;AVGPOST=0.9985;RSQ=0.9837;ERATE=0.0003;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 169361226 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169361319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1312;AVGPOST=0.9979;RSQ=0.9921;ERATE=0.0005;THETA=0.0004;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169361340 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169361416 rs76139909 GTC G 39342 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2122;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 169361418 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.480;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.5201;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169361420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7221;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169361553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0271;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0002;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169361613 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169361644 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7444;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169361689 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5496;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169361741 rs35424104 C CA 27 PASS INDEL;BAVGPOST=0.996;BRSQ=0.549;LDAF=0.0085;AVGPOST=0.9895;RSQ=0.5040;ERATE=0.0028;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169361770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169361801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169361940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7839;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169361951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8696;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169361990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169362041 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8236;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169362102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7705;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169362225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5020;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169362239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169362357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8366;ERATE=0.0005;THETA=0.0029;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169362394 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4452;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169362431 . C CA 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169362490 . TTTCTTACTCTACCTC T 2436 PASS INDEL;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0116;AVGPOST=0.9963;RSQ=0.8746;ERATE=0.0005;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169362757 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.6887;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169362805 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4408;AVGPOST=0.9972;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=963;AN=2184 GT:DS:GL:BD 0.44093406 0
1 169362849 . C CT 6918 PASS INDEL;BAVGPOST=0.985;BRSQ=0.937;LDAF=0.1259;AVGPOST=0.9945;RSQ=0.9795;ERATE=0.0007;THETA=0.0002;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 169362864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0279;AVGPOST=0.9983;RSQ=0.9761;ERATE=0.0004;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169362950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7401;AVGPOST=0.9834;RSQ=0.9667;ERATE=0.0019;THETA=0.0004;AC=1624;AN=2184 GT:DS:GL:BD 0.74358976 1
1 169362987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169363129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8147;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169363130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0082;AVGPOST=0.9989;RSQ=0.9354;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169363203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 169363272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169363419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0055;AVGPOST=0.9972;RSQ=0.8012;ERATE=0.0008;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169363420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0628;AVGPOST=0.9989;RSQ=0.9915;ERATE=0.0003;THETA=0.0003;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169363554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169363569 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0439;AVGPOST=0.9996;RSQ=0.9956;ERATE=0.0002;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 169363597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9574;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169363610 . T TA 149 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169363701 . AC A 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7280;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169363816 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9414;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169363840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169363964 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9242;ERATE=0.0002;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169364014 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7453;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0002;THETA=0.0008;AC=1629;AN=2184 GT:DS:GL:BD 0.74587911 1
1 169364183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169364196 . T TG 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0046;AVGPOST=0.9968;RSQ=0.7285;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169364201 . A AC 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7866;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169364242 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169364391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169364476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169364479 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0315;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 169364553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9609;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169364699 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169365087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0062;AVGPOST=0.9952;RSQ=0.6936;ERATE=0.0013;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169365134 . TAAAC T 290 PASS INDEL;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0045;AVGPOST=0.9960;RSQ=0.6372;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169365168 . AACTT A 143 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4998;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169365743 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5731;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169365858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169365872 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169366076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1861;AVGPOST=0.9972;RSQ=0.9932;ERATE=0.0005;THETA=0.0002;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 169366089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2263;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0002;THETA=0.0001;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 169366209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1300;AVGPOST=0.9976;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 169366278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5285;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169366359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169366433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169366434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8383;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169366516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2262;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 169366525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169366557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169366558 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169366943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8363;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169366959 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169367002 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169367093 . AG A 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8254;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169367212 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7460;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=1630;AN=2184 GT:DS:GL:BD 0.74633700 1
1 169367343 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169367356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2262;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0005;THETA=0.0002;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 169367497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6471;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169367515 . TAATG T 191 PASS INDEL;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6678;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169367518 . TGAG T 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6142;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169367527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5687;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169367750 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169367813 rs66522441 CCT C 6144 PASS INDEL;BAVGPOST=0.993;BRSQ=0.955;LDAF=0.0636;AVGPOST=0.9960;RSQ=0.9705;ERATE=0.0011;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 169367871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2131;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 169368012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7495;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169368054 . TTGAC T 365 PASS INDEL;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9240;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169368208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7329;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169368301 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3038;AVGPOST=0.9995;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=665;AN=2184 GT:DS:GL:BD 0.30448717 0
1 169368491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6159;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169368560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7421;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169368562 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4424;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0002;AC=966;AN=2184 GT:DS:GL:BD 0.44230768 0
1 169368728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4288;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169368782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7710;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169368884 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.5503;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169368921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0124;AVGPOST=0.9995;RSQ=0.9792;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169368954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5434;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169368973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0128;AVGPOST=0.9986;RSQ=0.9553;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169369017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.3933;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169369330 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0626;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169369419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9498;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169369458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7446;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=1628;AN=2184 GT:DS:GL:BD 0.74542123 1
1 169369465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169369606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169369883 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4411;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=963;AN=2184 GT:DS:GL:BD 0.44093406 0
1 169369980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5251;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169370088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.4374;AVGPOST=0.9892;RSQ=0.9831;ERATE=0.0034;THETA=0.0004;AC=958;AN=2184 GT:DS:GL:BD 0.43864468 0
1 169370117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.955;LDAF=0.1756;AVGPOST=0.9906;RSQ=0.9787;ERATE=0.0005;THETA=0.0007;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 169370150 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1858;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 169370207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0152;AVGPOST=0.9974;RSQ=0.9321;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169370227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7444;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0006;THETA=0.0002;AC=1628;AN=2184 GT:DS:GL:BD 0.74542123 1
1 169370244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4409;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0007;THETA=0.0004;AC=963;AN=2184 GT:DS:GL:BD 0.44093406 0
1 169370251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.873;LDAF=0.0341;AVGPOST=0.9941;RSQ=0.9311;ERATE=0.0004;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 169370310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6606;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169370336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1864;AVGPOST=0.9983;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 169370405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1282;AVGPOST=0.9979;RSQ=0.9925;ERATE=0.0004;THETA=0.0002;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 169370508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4353;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169370559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4607;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169370667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0069;AVGPOST=0.9957;RSQ=0.7748;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169370741 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4306;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169370752 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0438;AVGPOST=0.9992;RSQ=0.9916;ERATE=0.0004;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 169370766 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0104;AVGPOST=0.9988;RSQ=0.9579;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169370806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8349;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169370879 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0126;AVGPOST=0.9993;RSQ=0.9736;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169370913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0080;AVGPOST=0.9989;RSQ=0.9371;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169370947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.946;LDAF=0.7258;AVGPOST=0.9716;RSQ=0.9459;ERATE=0.0048;THETA=0.0003;AC=1599;AN=2184 GT:DS:GL:BD 0.73214287 1
1 169370965 . T TA 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169370996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3624;AVGPOST=0.9907;RSQ=0.9847;ERATE=0.0037;THETA=0.0003;AC=793;AN=2184 GT:DS:GL:BD 0.36309522 0
1 169370997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5059;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169371004 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0271;AVGPOST=0.9995;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169371047 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4881;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169371095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0060;AVGPOST=0.9972;RSQ=0.8117;ERATE=0.0004;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169371103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0062;AVGPOST=0.9989;RSQ=0.9333;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169371144 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5838;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169371237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169371465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0774;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0001;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169371479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4902;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169371487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0271;AVGPOST=0.9996;RSQ=0.9941;ERATE=0.0002;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169371650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1295;AVGPOST=0.9966;RSQ=0.9887;ERATE=0.0004;THETA=0.0005;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169372054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1265;AVGPOST=0.9971;RSQ=0.9899;ERATE=0.0004;THETA=0.0004;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 169372065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.5213;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169372143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169372148 . CCATGTG C 281 PASS INDEL;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169372220 . CA C 651 PASS INDEL;BAVGPOST=0.948;BRSQ=0.629;LDAF=0.1025;AVGPOST=0.9006;RSQ=0.5888;ERATE=0.0109;THETA=0.0003;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 169372223 . A AC 7031 PASS INDEL;BAVGPOST=0.898;BRSQ=0.802;LDAF=0.3034;AVGPOST=0.8665;RSQ=0.7834;ERATE=0.0199;THETA=0.0002;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 169372224 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.931;LDAF=0.3660;AVGPOST=0.9284;RSQ=0.8916;ERATE=0.0177;THETA=0.0004;AC=803;AN=2184 GT:DS:GL:BD 0.36767399 0
1 169372241 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0092;AVGPOST=0.9961;RSQ=0.8178;ERATE=0.0011;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169372259 . GA G 5290 PASS INDEL;BAVGPOST=0.760;BRSQ=0.663;LDAF=0.5113;AVGPOST=0.7559;RSQ=0.6849;ERATE=0.0398;THETA=0.0003;AC=1186;AN=2184 GT:DS:GL:BD 0.54304028 1
1 169372289 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.959;LDAF=0.1293;AVGPOST=0.9917;RSQ=0.9703;ERATE=0.0029;THETA=0.0002;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 169372326 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7444;AVGPOST=0.9956;RSQ=0.9907;ERATE=0.0014;THETA=0.0004;AC=1628;AN=2184 GT:DS:GL:BD 0.74542123 1
1 169372339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8041;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169372346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169372492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8531;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169372756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6400;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169372897 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4876;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169372908 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6738;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169372966 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.4396;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0006;THETA=0.0005;AC=961;AN=2184 GT:DS:GL:BD 0.44001833 0
1 169373009 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.917;LDAF=0.0266;AVGPOST=0.9949;RSQ=0.9237;ERATE=0.0004;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 169373140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0068;AVGPOST=0.9989;RSQ=0.9387;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169373159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.4367;AVGPOST=0.9915;RSQ=0.9872;ERATE=0.0012;THETA=0.0003;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 169373276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0069;AVGPOST=0.9928;RSQ=0.5547;ERATE=0.0007;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169373393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.713;LDAF=0.0096;AVGPOST=0.9907;RSQ=0.6022;ERATE=0.0022;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169373469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.8770;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169373624 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5217;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169373732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0043;AVGPOST=0.9966;RSQ=0.6779;ERATE=0.0008;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169373744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0366;AVGPOST=0.9987;RSQ=0.9853;ERATE=0.0003;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 169373833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.917;LDAF=0.1328;AVGPOST=0.9910;RSQ=0.9682;ERATE=0.0007;THETA=0.0003;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 169373836 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.917;LDAF=0.1290;AVGPOST=0.9914;RSQ=0.9692;ERATE=0.0005;THETA=0.0012;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 169373909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9908;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169374013 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0083;AVGPOST=0.9988;RSQ=0.9539;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169374021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1307;AVGPOST=0.9974;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169374135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8237;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169374152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.976;LDAF=0.1833;AVGPOST=0.9870;RSQ=0.9701;ERATE=0.0019;THETA=0.0003;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 169374307 . A AT 197 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8029;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169374451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.4348;AVGPOST=0.9890;RSQ=0.9839;ERATE=0.0014;THETA=0.0002;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 169374453 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0111;AVGPOST=0.9992;RSQ=0.9732;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169374532 . T TG 34 PASS INDEL;BAVGPOST=0.994;BRSQ=0.693;LDAF=0.0186;AVGPOST=0.9823;RSQ=0.6319;ERATE=0.0050;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169374619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.745;LDAF=0.0054;AVGPOST=0.9973;RSQ=0.7925;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169374625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4927;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169374740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8470;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169374793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0635;AVGPOST=0.9986;RSQ=0.9888;ERATE=0.0004;THETA=0.0003;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 169374863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9054;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169374874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3794;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169374942 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9064;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169374972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6930;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169375047 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0051;AVGPOST=0.9961;RSQ=0.6828;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169375051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0071;AVGPOST=0.9937;RSQ=0.6466;ERATE=0.0009;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169375056 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.910;LDAF=0.4015;AVGPOST=0.9407;RSQ=0.9142;ERATE=0.0037;THETA=0.0003;AC=903;AN=2184 GT:DS:GL:BD 0.41346154 0
1 169375088 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.529;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5276;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169375181 rs71121776 T TAAAC 9692 PASS INDEL;BAVGPOST=0.666;BRSQ=0.528;LDAF=0.4224;AVGPOST=0.7163;RSQ=0.5959;ERATE=0.0368;THETA=0.0005;AC=886;AN=2184 GT:DS:GL:BD 0.40567765 0
1 169375285 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.940;LDAF=0.4162;AVGPOST=0.9526;RSQ=0.9379;ERATE=0.0094;THETA=0.0004;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 169375313 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.964;LDAF=0.0434;AVGPOST=0.9982;RSQ=0.9838;ERATE=0.0003;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 169375413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169375444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7735;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169375798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169375802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169375827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169375948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169375963 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0053;AVGPOST=0.9977;RSQ=0.8213;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169375967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0031;AVGPOST=0.9972;RSQ=0.6530;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169375982 . CCTG C 1042 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169376061 . T TA 9111 PASS INDEL;BAVGPOST=0.990;BRSQ=0.944;LDAF=0.0928;AVGPOST=0.9751;RSQ=0.8897;ERATE=0.0063;THETA=0.0007;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 169376127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9672;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169376148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7904;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169376195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169376233 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7412;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169376645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169376673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8052;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169376727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4301;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169376729 . AT A 62 PASS INDEL;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6452;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169376778 . GA G 158 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4512;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169376787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169376867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2710;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 169377039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8659;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169377073 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.6832;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169377116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169377123 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0117;AVGPOST=0.9990;RSQ=0.9674;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169377253 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9318;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169377382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6930;ERATE=0.0013;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169377513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6773;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169377663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2141;AVGPOST=0.9962;RSQ=0.9941;ERATE=0.0004;THETA=0.0004;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 169377788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0155;AVGPOST=0.9992;RSQ=0.9796;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169377825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0035;AVGPOST=0.9968;RSQ=0.6559;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169377983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.856;LDAF=0.0130;AVGPOST=0.9960;RSQ=0.8859;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169378077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0060;AVGPOST=0.9988;RSQ=0.9181;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169378177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1449;AVGPOST=0.9984;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 169378178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7727;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169378290 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9748;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169378589 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6322;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169378590 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0151;AVGPOST=0.9998;RSQ=0.9934;ERATE=0.0003;THETA=0.0009;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169378629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9270;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169378738 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8077;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169378971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2127;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 169379150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4415;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=965;AN=2184 GT:DS:GL:BD 0.44184983 0
1 169379276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8995;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169379294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9501;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169379314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169379383 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.955;LDAF=0.0317;AVGPOST=0.9995;RSQ=0.9921;ERATE=0.0002;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 169379397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0626;AVGPOST=0.9994;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169379518 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0113;AVGPOST=0.9983;RSQ=0.9324;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169379549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0074;AVGPOST=0.9971;RSQ=0.8555;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169379619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169379694 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169379783 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169379845 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1885;AVGPOST=0.9978;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 169379997 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0779;AVGPOST=0.9984;RSQ=0.9917;ERATE=0.0003;THETA=0.0001;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169380020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8808;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169380050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169380098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2259;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0002;THETA=0.0002;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 169380105 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169380206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.834;LDAF=0.0088;AVGPOST=0.9962;RSQ=0.8326;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169380254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.971;LDAF=0.2627;AVGPOST=0.9873;RSQ=0.9778;ERATE=0.0033;THETA=0.0005;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 169380562 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8430;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169380615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0779;AVGPOST=0.9982;RSQ=0.9906;ERATE=0.0003;THETA=0.0013;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169380665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8777;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169380718 . T TACTTCTGAAACTATTCC 1582 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0107;AVGPOST=0.9940;RSQ=0.8085;ERATE=0.0004;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169380874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169380904 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2120;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0002;THETA=0.0004;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 169381186 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2260;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0005;THETA=0.0002;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 169381367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9009;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169381386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6257;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169381415 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.750;LDAF=0.0066;AVGPOST=0.9961;RSQ=0.7600;ERATE=0.0006;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169381473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0064;AVGPOST=0.9993;RSQ=0.9511;ERATE=0.0002;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169381588 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9076;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169381798 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169381951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1856;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 169381972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8599;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169382276 . C CT 48 PASS INDEL;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.3861;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169382582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0265;AVGPOST=0.9976;RSQ=0.9712;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 169382750 . TA T 214 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8949;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169382767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.889;LDAF=0.0123;AVGPOST=0.9975;RSQ=0.9242;ERATE=0.0002;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169382843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8821;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169382881 . GA G 380 PASS INDEL;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8453;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169382895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.4962;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169382919 . A AG 149 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169382994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0776;AVGPOST=0.9984;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169383025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1860;AVGPOST=0.9955;RSQ=0.9895;ERATE=0.0007;THETA=0.0004;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 169383105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1308;AVGPOST=0.9931;RSQ=0.9745;ERATE=0.0009;THETA=0.0012;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169383258 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.474;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3794;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169383660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1309;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169383679 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9487;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169383863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5624;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169383872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169383880 . TA T 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.4600;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169383934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7455;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=1630;AN=2184 GT:DS:GL:BD 0.74633700 1
1 169383980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0092;AVGPOST=0.9979;RSQ=0.9183;ERATE=0.0002;THETA=0.0014;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169384090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0111;AVGPOST=0.9965;RSQ=0.8935;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169384280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5834;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169384323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8777;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169384345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6292;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169384437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4414;AVGPOST=0.9942;RSQ=0.9921;ERATE=0.0015;THETA=0.0005;AC=963;AN=2184 GT:DS:GL:BD 0.44093406 0
1 169384446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0773;AVGPOST=0.9985;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169384573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169384672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4415;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 169384728 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0315;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0002;THETA=0.0002;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 169384756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169384789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169384804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9994;RSQ=0.9523;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169384805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8689;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169384820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169384848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9715;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169384888 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169384899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7452;AVGPOST=0.9982;RSQ=0.9959;ERATE=0.0006;THETA=0.0002;AC=1630;AN=2184 GT:DS:GL:BD 0.74633700 1
1 169384999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0036;AVGPOST=0.9995;RSQ=0.9445;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169385051 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7467;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169385060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169385083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0271;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0002;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169385145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6542;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169385189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9902;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169385203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169385276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9112;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169385410 rs71714952 GCA G 13253 PASS INDEL;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1295;AVGPOST=0.9979;RSQ=0.9930;ERATE=0.0004;THETA=0.0002;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 169385434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7683;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169385490 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169385506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.915;LDAF=0.0213;AVGPOST=0.9962;RSQ=0.9262;ERATE=0.0004;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 169385616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4407;AVGPOST=0.9948;RSQ=0.9926;ERATE=0.0008;THETA=0.0002;AC=963;AN=2184 GT:DS:GL:BD 0.44093406 0
1 169385646 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4409;AVGPOST=0.9977;RSQ=0.9966;ERATE=0.0006;THETA=0.0002;AC=963;AN=2184 GT:DS:GL:BD 0.44093406 0
1 169385866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1855;AVGPOST=0.9980;RSQ=0.9950;ERATE=0.0005;THETA=0.0009;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 169385986 . G GT 713 PASS INDEL;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0102;AVGPOST=0.9978;RSQ=0.9085;ERATE=0.0004;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169386014 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.6041;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169386162 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169386211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0002;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169386250 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7450;AVGPOST=0.9962;RSQ=0.9917;ERATE=0.0006;THETA=0.0002;AC=1629;AN=2184 GT:DS:GL:BD 0.74587911 1
1 169386273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4542;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169386285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169386334 . CA C 158 PASS INDEL;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.3599;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169386495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4318;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169386522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9580;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169386627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169386745 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9620;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169386897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169386909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0026;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169387127 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0045;AVGPOST=0.9968;RSQ=0.7141;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169387236 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6318;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169387286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0625;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0002;THETA=0.0004;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169387381 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7300;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0002;THETA=0.0002;AC=1595;AN=2184 GT:DS:GL:BD 0.73031133 1
1 169387386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6684;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169387417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0361;AVGPOST=0.9984;RSQ=0.9828;ERATE=0.0003;THETA=0.0002;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 169387425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8407;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169387466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5258;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169387563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2261;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0005;THETA=0.0005;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 169387668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0282;AVGPOST=0.9975;RSQ=0.9685;ERATE=0.0004;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169387706 . G GGA 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8527;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169387826 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0631;AVGPOST=0.9967;RSQ=0.9757;ERATE=0.0005;THETA=0.0003;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 169387889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0060;AVGPOST=0.9949;RSQ=0.6927;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169387892 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8483;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169387896 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.880;LDAF=0.0167;AVGPOST=0.9915;RSQ=0.7968;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169387911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0628;AVGPOST=0.9994;RSQ=0.9952;ERATE=0.0002;THETA=0.0003;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169387918 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4420;AVGPOST=0.9963;RSQ=0.9945;ERATE=0.0010;THETA=0.0002;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 169387918 . C CT 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7780;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169387936 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169388139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0002;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169388193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2206;AVGPOST=0.9948;RSQ=0.9924;ERATE=0.0015;THETA=0.0001;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 169388211 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0019;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169388282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169388390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169388435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169388443 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9880;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169388449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0019;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169388526 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7230;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169388546 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169388576 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6567;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169388721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8961;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169388988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169389071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6231;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169389194 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1854;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0008;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 169389200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7769;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169389288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1309;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0002;THETA=0.0001;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169389481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2026;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 169389503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6272;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169389590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7201;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169389715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0601;AVGPOST=0.9994;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 169389853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0772;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169390076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1858;AVGPOST=0.9984;RSQ=0.9956;ERATE=0.0006;THETA=0.0002;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 169390097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1319;AVGPOST=0.9979;RSQ=0.9928;ERATE=0.0005;THETA=0.0003;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 169390136 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7452;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=1628;AN=2184 GT:DS:GL:BD 0.74542123 1
1 169390195 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169390287 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169390300 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.2807;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169390327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0994;AVGPOST=0.9983;RSQ=0.9939;ERATE=0.0003;THETA=0.0002;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 169390514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169390583 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169390656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0036;AVGPOST=1.0000;RSQ=0.9940;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169390673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169390675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169390749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169390761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169390764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169390777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7927;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169390786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169390789 . GCTGAGC G 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8058;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169390810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169390838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169390850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169390859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169390866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169390871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169390873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169390907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169390953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169390957 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1855;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0004;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 169391103 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169391135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0014;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169391154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7454;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0003;AC=1629;AN=2184 GT:DS:GL:BD 0.74587911 1
1 169391301 MERGED_DEL_2_6241 A <DEL> . . SV;BAVGPOST=0.999;BRSQ=0.525;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.1218;ERATE=0.0004;THETA=0.0002;CIEND=-178,192;CIPOS=-156,215;END=169395850;SOURCE=CNVnator_169391301_169395850;SVTYPE=DEL;AC=0;A GT:DS:GL:BD 0.00000000 0
1 169391367 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169391479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169391547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.3680;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169391636 . AT A 1009 PASS INDEL;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0135;AVGPOST=0.9979;RSQ=0.9385;ERATE=0.0004;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169391729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1031;AVGPOST=0.9989;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 169391772 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169391974 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9660;ERATE=0.0003;THETA=0.0036;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169392211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6644;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169392259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.2297;AVGPOST=0.9798;RSQ=0.9692;ERATE=0.0020;THETA=0.0004;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 169392315 . ATT A 8066 PASS INDEL;BAVGPOST=0.885;BRSQ=0.815;LDAF=0.3868;AVGPOST=0.8853;RSQ=0.8324;ERATE=0.0113;THETA=0.0005;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 169392317 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.862;BRSQ=0.674;LDAF=0.3073;AVGPOST=0.8069;RSQ=0.6113;ERATE=0.0585;THETA=0.0005;AC=605;AN=2184 GT:DS:GL:BD 0.27701464 0
1 169392383 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9224;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169392400 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0085;AVGPOST=0.9989;RSQ=0.9418;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169392439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7881;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169392665 rs72156183 GCTTTT G 58891 PASS INDEL;BAVGPOST=0.950;BRSQ=0.889;LDAF=0.6881;AVGPOST=0.9064;RSQ=0.8344;ERATE=0.0309;THETA=0.0004;AC=1548;AN=2184 GT:DS:GL:BD 0.70879120 1
1 169392703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9526;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169392792 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0090;AVGPOST=0.9992;RSQ=0.9583;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169392934 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169393139 . AT A 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4961;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169393337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.666;LDAF=0.0169;AVGPOST=0.9816;RSQ=0.5844;ERATE=0.0044;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169393799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2261;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 169393827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9333;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169393836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169393841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9568;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169393888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2263;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0002;THETA=0.0004;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 169394057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169394083 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169394121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169394226 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7899;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0002;THETA=0.0003;AC=1726;AN=2184 GT:DS:GL:BD 0.79029304 1
1 169394329 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169394521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6710;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169394710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6749;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169394814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5994;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169394905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9655;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169395055 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.971;LDAF=0.0772;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169395183 . CAT C 1394 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0128;AVGPOST=0.9987;RSQ=0.9586;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169395259 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0772;AVGPOST=0.9988;RSQ=0.9929;ERATE=0.0004;THETA=0.0002;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 169395321 . AC A 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4969;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169395477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9113;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169395759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.777;LDAF=0.0059;AVGPOST=0.9976;RSQ=0.8468;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169395780 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169395865 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6708;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169395873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8382;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169395976 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.6151;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169396062 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8708;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169396092 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8957;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169396093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0002;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169396151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8912;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169396183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.6426;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169396285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.5140;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169396322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7411;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169396461 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5892;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169396552 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0078;AVGPOST=0.9987;RSQ=0.9340;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169396605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.887;LDAF=0.0975;AVGPOST=0.9808;RSQ=0.9200;ERATE=0.0012;THETA=0.0005;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 169396620 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.976;LDAF=0.1315;AVGPOST=0.9954;RSQ=0.9845;ERATE=0.0004;THETA=0.0001;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 169396670 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169396955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6177;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169396963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8514;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169396983 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8602;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169396990 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9458;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169396991 . GT G 136 PASS INDEL;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6803;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169397068 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0041;AVGPOST=0.9977;RSQ=0.8000;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169397137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7437;AVGPOST=0.9979;RSQ=0.9955;ERATE=0.0004;THETA=0.0042;AC=1626;AN=2184 GT:DS:GL:BD 0.74450547 1
1 169397213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169397484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4417;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 169397496 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169397749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.8340;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169398013 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0630;AVGPOST=0.9993;RSQ=0.9946;ERATE=0.0002;THETA=0.0009;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169398214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9111;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169398279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5632;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169398330 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8218;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169398340 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169398344 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7462;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169398371 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169398395 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0439;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 169398399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9705;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169398426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.914;LDAF=0.0180;AVGPOST=0.9957;RSQ=0.9232;ERATE=0.0003;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 169398495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0002;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169398530 . ACTT A 163 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6243;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169398615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169398619 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0119;AVGPOST=0.9961;RSQ=0.8688;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169398642 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4634;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169398665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8463;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169398677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9996;RSQ=0.9560;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169398696 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169398775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4376;AVGPOST=0.9898;RSQ=0.9848;ERATE=0.0051;THETA=0.0003;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 169398892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0067;AVGPOST=0.9984;RSQ=0.9004;ERATE=0.0007;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169398893 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169398940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0092;AVGPOST=0.9983;RSQ=0.9330;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169398947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169398970 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0151;AVGPOST=0.9995;RSQ=0.9863;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169398972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9632;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169399057 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7958;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169399103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0125;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0002;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169399108 . GTCT G 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169399119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2124;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0004;THETA=0.0002;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 169399148 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169399222 . A AG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7729;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169399318 . AT A 859 PASS INDEL;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0061;AVGPOST=0.9973;RSQ=0.8564;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169399344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5888;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169399438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8316;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169399452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169399622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0193;AVGPOST=0.9980;RSQ=0.9636;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 169399624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7803;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169399693 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9770;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169399725 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9916;ERATE=0.0002;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169399844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7446;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0005;THETA=0.0001;AC=1628;AN=2184 GT:DS:GL:BD 0.74542123 1
1 169399922 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0127;AVGPOST=0.9991;RSQ=0.9732;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169399968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8965;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169399975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0274;AVGPOST=0.9992;RSQ=0.9893;ERATE=0.0002;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169400223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6594;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169400355 . T TG 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169400403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169400456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9475;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169400616 rs35184871 ACT A 79050 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4393;AVGPOST=0.9967;RSQ=0.9954;ERATE=0.0008;THETA=0.0004;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 169400745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0355;AVGPOST=0.9973;RSQ=0.9668;ERATE=0.0003;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 169400751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0776;AVGPOST=0.9989;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169400780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1878;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0004;THETA=0.0001;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 169400825 . T TA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6100;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169400907 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9581;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169400969 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4414;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 169401086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0067;AVGPOST=0.9990;RSQ=0.9459;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169401087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0122;AVGPOST=0.9987;RSQ=0.9622;ERATE=0.0002;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169401115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0777;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0001;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169401295 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6118;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169401469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1859;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0001;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 169401820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8561;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169401824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0778;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0002;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169401827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0627;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169401890 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2655;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0004;THETA=0.0004;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 169401912 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8789;ERATE=0.0008;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169402058 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169402111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169402174 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.889;LDAF=0.0284;AVGPOST=0.9923;RSQ=0.8973;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 169402318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6398;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169402320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.857;LDAF=0.0120;AVGPOST=0.9963;RSQ=0.8787;ERATE=0.0007;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169402456 rs76779550 ACAATT A 34738 PASS INDEL;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2131;AVGPOST=0.9959;RSQ=0.9923;ERATE=0.0011;THETA=0.0005;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 169402528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0074;AVGPOST=0.9963;RSQ=0.8111;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169402613 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5272;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169402747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169402773 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169402852 . CATAA C 791 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169403124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9623;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169403164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169403334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0777;AVGPOST=0.9994;RSQ=0.9963;ERATE=0.0004;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169403395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169403682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169403700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169403703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2710;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 169403765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0083;AVGPOST=0.9995;RSQ=0.9743;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169403780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2656;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0004;THETA=0.0024;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 169403842 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7436;AVGPOST=0.9970;RSQ=0.9939;ERATE=0.0007;THETA=0.0002;AC=1628;AN=2184 GT:DS:GL:BD 0.74542123 1
1 169403883 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9996;RSQ=0.9730;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169403906 rs74720359 AAATAAT A 51890 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2270;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 169403992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8990;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169404190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169404318 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169404434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6734;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169404467 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9986;RSQ=0.9420;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169404492 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9631;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169404660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169404676 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7205;ERATE=0.0007;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169404727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0088;AVGPOST=0.9986;RSQ=0.9341;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169404790 . T TG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8340;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169404870 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0299;AVGPOST=0.9949;RSQ=0.9323;ERATE=0.0005;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 169404915 . T TA 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4172;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169404989 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7826;AVGPOST=0.9979;RSQ=0.9945;ERATE=0.0006;THETA=0.0004;AC=1711;AN=2184 GT:DS:GL:BD 0.78342491 1
1 169405045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1314;AVGPOST=0.9982;RSQ=0.9947;ERATE=0.0002;THETA=0.0002;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169405084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0049;AVGPOST=0.9965;RSQ=0.7428;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169405160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0101;AVGPOST=0.9973;RSQ=0.8949;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169405195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169405274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0271;AVGPOST=0.9997;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169405366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4415;AVGPOST=0.9973;RSQ=0.9959;ERATE=0.0007;THETA=0.0002;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 169405413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169405459 . G GA 214 PASS INDEL;BAVGPOST=0.971;BRSQ=0.524;LDAF=0.0472;AVGPOST=0.9447;RSQ=0.5091;ERATE=0.0178;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 169405467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6204;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169405485 . C CA 6532 PASS INDEL;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0270;AVGPOST=0.9989;RSQ=0.9845;ERATE=0.0004;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 169405517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0627;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169405578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8396;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169405804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7436;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169405850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4403;AVGPOST=0.9928;RSQ=0.9895;ERATE=0.0020;THETA=0.0002;AC=962;AN=2184 GT:DS:GL:BD 0.44047618 0
1 169405878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.9018;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169406073 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169406169 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1860;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 169406170 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169406242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0135;AVGPOST=0.9986;RSQ=0.9583;ERATE=0.0003;THETA=0.0001;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169406290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169406300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2259;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 169406382 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169406397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169406434 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6359;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169406482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.4128;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169406533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4425;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0006;THETA=0.0002;AC=966;AN=2184 GT:DS:GL:BD 0.44230768 0
1 169406545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0627;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0002;THETA=0.0001;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169406622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9988;RSQ=0.9696;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169406628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9752;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169406655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5584;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169406917 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6258;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169406936 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.8986;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169406983 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9707;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169407006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0317;AVGPOST=0.9996;RSQ=0.9945;ERATE=0.0002;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 169407083 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8193;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169407304 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169407321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0271;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169407363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169407384 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1316;AVGPOST=0.9988;RSQ=0.9955;ERATE=0.0004;THETA=0.0002;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 169407547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7863;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169407645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6736;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169407686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7251;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169407938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5617;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169408073 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0058;AVGPOST=0.9976;RSQ=0.8259;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169408199 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9859;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169408400 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8075;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169408628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7778;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169408647 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169408689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5419;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169408696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.8049;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169408795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8899;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169408809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1891;AVGPOST=0.9979;RSQ=0.9946;ERATE=0.0005;THETA=0.0005;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 169408818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8895;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169408825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9349;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169408826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8042;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169408857 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0786;AVGPOST=0.9983;RSQ=0.9912;ERATE=0.0004;THETA=0.0006;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169408876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1858;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 169408922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7884;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169408993 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9290;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169409024 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9885;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169409025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169409166 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8858;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169409206 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2259;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 169409346 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4393;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169409426 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.836;LDAF=0.0111;AVGPOST=0.9947;RSQ=0.8096;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169409427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5346;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169409459 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5793;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169409676 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169409694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0002;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169409782 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.5316;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169409852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169410037 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7478;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169410071 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5142;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169410276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7172;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169410428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.964;LDAF=0.0623;AVGPOST=0.9990;RSQ=0.9930;ERATE=0.0002;THETA=0.0002;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169410486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1314;AVGPOST=0.9979;RSQ=0.9923;ERATE=0.0004;THETA=0.0003;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 169410499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.866;LDAF=0.0078;AVGPOST=0.9969;RSQ=0.8518;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169410977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6598;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169411047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9988;RSQ=0.9616;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169411125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0798;AVGPOST=0.9989;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 169411167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169411273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169411357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2062;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 169411436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7448;AVGPOST=0.9973;RSQ=0.9936;ERATE=0.0006;THETA=0.0002;AC=1629;AN=2184 GT:DS:GL:BD 0.74587911 1
1 169411785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169411888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0450;AVGPOST=0.9994;RSQ=0.9937;ERATE=0.0002;THETA=0.0002;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 169411902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169411909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.865;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8638;ERATE=0.0002;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169411957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5471;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169411959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0037;AVGPOST=0.9964;RSQ=0.6329;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169412011 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0626;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169412012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0782;AVGPOST=0.9986;RSQ=0.9919;ERATE=0.0003;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169412043 . GACAA G 149 PASS INDEL;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.4010;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169412066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1859;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 169412191 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169412291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9994;RSQ=0.9831;ERATE=0.0004;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169412350 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169412481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169412529 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169413024 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169413035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.881;LDAF=0.0199;AVGPOST=0.9968;RSQ=0.9359;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 169413173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5301;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169413254 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0777;AVGPOST=0.9994;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169413300 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6660;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169413353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169413393 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1858;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0002;THETA=0.0004;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 169413441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169413472 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.537;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5899;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169413570 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7182;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169413595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169413683 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169413731 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2057;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0005;THETA=0.0002;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 169413867 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0105;AVGPOST=0.9959;RSQ=0.8758;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169413917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169413974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9584;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169414024 . A AC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0022;AVGPOST=0.9964;RSQ=0.3563;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169414138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6200;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169414140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8354;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169414245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2710;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0002;THETA=0.0004;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 169414312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2257;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0004;THETA=0.0008;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 169414510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169414511 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5202;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169414580 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169414622 . T TC 29495 PASS INDEL;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.7356;AVGPOST=0.9875;RSQ=0.9731;ERATE=0.0042;THETA=0.0006;AC=1615;AN=2184 GT:DS:GL:BD 0.73946887 1
1 169414623 rs11450761 C CT 93775 PASS INDEL;BAVGPOST=0.991;BRSQ=0.980;LDAF=0.7371;AVGPOST=0.9905;RSQ=0.9813;ERATE=0.0013;THETA=0.0008;AC=1612;AN=2184 GT:DS:GL:BD 0.73809522 1
1 169414681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9803;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169414733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6534;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169414734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169414777 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0778;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169414803 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7139;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169414854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0777;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169414862 . AT A 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4172;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169414874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169414917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4417;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=965;AN=2184 GT:DS:GL:BD 0.44184983 0
1 169414957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6526;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169414969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7956;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169415123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8138;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169415128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.1859;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 169415299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7614;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169415405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8436;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169415407 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169415444 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8381;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169415453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6741;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169415502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7981;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169415558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2235;AVGPOST=0.9918;RSQ=0.9873;ERATE=0.0005;THETA=0.0003;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 169415724 . C CT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5127;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169415812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0777;AVGPOST=0.9994;RSQ=0.9961;ERATE=0.0003;THETA=0.0007;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169415888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.7303;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169415932 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1312;AVGPOST=0.9986;RSQ=0.9946;ERATE=0.0004;THETA=0.0006;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 169416058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4689;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169416060 . T TA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6030;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169416075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7854;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169416139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169416149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5418;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169416214 . CAT C 2225 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9985;RSQ=0.9635;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169416258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1451;AVGPOST=0.9973;RSQ=0.9906;ERATE=0.0007;THETA=0.0006;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 169416319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9973;RSQ=0.9503;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169416367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0136;AVGPOST=0.9977;RSQ=0.9291;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169416542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8796;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169416598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.513;LDAF=0.0157;AVGPOST=0.9784;RSQ=0.4614;ERATE=0.0043;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169416738 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169416739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8697;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169416860 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6204;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169417290 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7648;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169417383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5403;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169417485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1867;AVGPOST=0.9980;RSQ=0.9950;ERATE=0.0004;THETA=0.0001;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 169417525 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2720;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0006;THETA=0.0003;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 169417576 . ACTT A 831 PASS INDEL;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0106;AVGPOST=0.9980;RSQ=0.9224;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169417606 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8891;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169417676 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0789;AVGPOST=0.9972;RSQ=0.9844;ERATE=0.0010;THETA=0.0004;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 169418011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6893;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169418102 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8099;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169418139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0264;AVGPOST=0.9995;RSQ=0.9920;ERATE=0.0002;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 169418203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169418224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5309;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169418256 . TAG T 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169418516 . GT G 64 PASS INDEL;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6189;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169418520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5408;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169418544 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9982;RSQ=0.8532;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169418653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4423;AVGPOST=0.9969;RSQ=0.9958;ERATE=0.0006;THETA=0.0003;AC=965;AN=2184 GT:DS:GL:BD 0.44184983 0
1 169418699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1881;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 169419013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8033;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169419272 . GGT G 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5546;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169419407 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0002;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169419425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169419543 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0626;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0002;THETA=0.0009;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169419578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169419934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0021;AVGPOST=0.9966;RSQ=0.4369;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169419940 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.899;LDAF=0.0086;AVGPOST=0.9979;RSQ=0.9216;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169420056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6360;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169420061 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=1.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0002;THETA=0.0003;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 169420090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5697;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169420126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169420162 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169420307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5326;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169420338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8194;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169420628 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9560;ERATE=0.0004;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169420641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0131;AVGPOST=0.9987;RSQ=0.9601;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169420645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169420663 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169420749 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6159;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169420874 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9752;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169420893 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7891;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169420972 . AG A 31187 PASS INDEL;BAVGPOST=0.988;BRSQ=0.971;LDAF=0.7419;AVGPOST=0.9898;RSQ=0.9782;ERATE=0.0009;THETA=0.0003;AC=1629;AN=2184 GT:DS:GL:BD 0.74587911 1
1 169421006 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169421023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0599;AVGPOST=0.9990;RSQ=0.9921;ERATE=0.0002;THETA=0.0004;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 169421072 . CTT C 1476 PASS INDEL;BAVGPOST=0.997;BRSQ=0.858;LDAF=0.0090;AVGPOST=0.9976;RSQ=0.8885;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169421255 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169421277 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9612;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169421351 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0778;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0002;THETA=0.0001;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169421517 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0272;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0002;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 169421682 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169421751 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0061;AVGPOST=0.9991;RSQ=0.9372;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169421757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1889;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 169421775 . C CT 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169421817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8633;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169421858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0062;AVGPOST=0.9966;RSQ=0.7884;ERATE=0.0005;THETA=0.0037;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169422056 . AT A 6 PASS INDEL;BAVGPOST=0.997;BRSQ=0.597;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5448;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169422317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0146;AVGPOST=0.9987;RSQ=0.9691;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169422536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169422681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5224;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169422762 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6621;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169422853 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169422889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169422914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.1937;AVGPOST=0.9948;RSQ=0.9889;ERATE=0.0004;THETA=0.0034;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 169423030 . AC A 418 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169423084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169423237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5312;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169423364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7575;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169423449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0073;AVGPOST=0.9996;RSQ=0.9765;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169423563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0160;AVGPOST=0.9973;RSQ=0.9454;ERATE=0.0004;THETA=0.0042;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169423596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7931;AVGPOST=0.9938;RSQ=0.9846;ERATE=0.0009;THETA=0.0002;AC=1734;AN=2184 GT:DS:GL:BD 0.79395604 1
1 169423772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0809;AVGPOST=0.9974;RSQ=0.9865;ERATE=0.0003;THETA=0.0003;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169423794 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169423795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5562;AVGPOST=0.9966;RSQ=0.9946;ERATE=0.0006;THETA=0.0003;AC=1216;AN=2184 GT:DS:GL:BD 0.55677658 1
1 169423810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7914;AVGPOST=0.9981;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=1730;AN=2184 GT:DS:GL:BD 0.79212457 1
1 169423872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.0228;AVGPOST=0.9939;RSQ=0.8974;ERATE=0.0004;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169423990 rs3841669 CA C 24450 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2349;AVGPOST=0.9937;RSQ=0.9895;ERATE=0.0006;THETA=0.0004;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 169424073 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5220;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169424088 . AG A 701 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0086;AVGPOST=0.9972;RSQ=0.8723;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169424098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.9540;AVGPOST=0.9975;RSQ=0.9776;ERATE=0.0003;THETA=0.0003;AC=2084;AN=2184 GT:DS:GL:BD 0.95421243 1
1 169424187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6788;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169424192 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6292;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169424424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0075;AVGPOST=0.9992;RSQ=0.9492;ERATE=0.0003;THETA=0.0034;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169424668 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2176;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 169424682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169424863 . G GATA 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.5094;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169425063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8540;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169425318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169425448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9441;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169425565 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1317;AVGPOST=0.9983;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 169425580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0331;AVGPOST=0.9993;RSQ=0.9898;ERATE=0.0004;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 169425664 rs67415566 TATTA T 61928 PASS INDEL;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3519;AVGPOST=0.9957;RSQ=0.9924;ERATE=0.0007;THETA=0.0003;AC=768;AN=2184 GT:DS:GL:BD 0.35164836 0
1 169425688 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7202;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169425707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0154;AVGPOST=0.9985;RSQ=0.9706;ERATE=0.0002;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169425746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169426024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0815;AVGPOST=0.9975;RSQ=0.9881;ERATE=0.0005;THETA=0.0002;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 169426121 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6584;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169426399 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169426834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8351;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169427011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8827;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169427025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.866;LDAF=0.0104;AVGPOST=0.9957;RSQ=0.8314;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169427315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7368;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169427347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1315;AVGPOST=0.9977;RSQ=0.9916;ERATE=0.0002;THETA=0.0004;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 169427417 . T TG 71 PASS INDEL;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7437;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169427422 rs77327182 T TG 24330 PASS INDEL;BAVGPOST=0.982;BRSQ=0.969;LDAF=0.2413;AVGPOST=0.9654;RSQ=0.9436;ERATE=0.0051;THETA=0.0003;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 169427426 . TG T 7110 PASS INDEL;BAVGPOST=0.808;BRSQ=0.615;LDAF=0.3475;AVGPOST=0.7689;RSQ=0.5688;ERATE=0.0790;THETA=0.0003;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 169427427 . G GT 9783 PASS INDEL;BAVGPOST=0.823;BRSQ=0.719;LDAF=0.5488;AVGPOST=0.7676;RSQ=0.6637;ERATE=0.0468;THETA=0.0005;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 169427431 rs66575325 TG T 30232 PASS INDEL;BAVGPOST=0.951;BRSQ=0.922;LDAF=0.5242;AVGPOST=0.9335;RSQ=0.9096;ERATE=0.0089;THETA=0.0003;AC=1164;AN=2184 GT:DS:GL:BD 0.53296703 1
1 169427435 . T TG 406 PASS INDEL;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0127;AVGPOST=0.9955;RSQ=0.8726;ERATE=0.0005;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169427482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.1861;AVGPOST=0.9966;RSQ=0.9925;ERATE=0.0005;THETA=0.0013;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 169427505 . G GT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169427516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169427559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0148;AVGPOST=0.9992;RSQ=0.9778;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169427604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169428105 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5531;AVGPOST=0.9825;RSQ=0.9751;ERATE=0.0020;THETA=0.0004;AC=1211;AN=2184 GT:DS:GL:BD 0.55448717 1
1 169428153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5202;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169428163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5671;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169428177 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.4151;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169428252 . TATTC T 453 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0044;AVGPOST=0.9962;RSQ=0.6228;ERATE=0.0008;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169428282 . AAAAAT A 135 PASS INDEL;BAVGPOST=0.997;BRSQ=0.608;LDAF=0.0085;AVGPOST=0.9904;RSQ=0.5796;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169428304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5554;AVGPOST=0.9940;RSQ=0.9909;ERATE=0.0013;THETA=0.0003;AC=1214;AN=2184 GT:DS:GL:BD 0.55586082 1
1 169428329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.602;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5625;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169428618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0275;AVGPOST=0.9988;RSQ=0.9836;ERATE=0.0003;THETA=0.0037;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169428675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169428685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7902;AVGPOST=0.9988;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=1728;AN=2184 GT:DS:GL:BD 0.79120880 1
1 169428806 . TAGC T 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4723;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169428889 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169428914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0137;AVGPOST=0.9990;RSQ=0.9690;ERATE=0.0002;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169428944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.9346;AVGPOST=0.9974;RSQ=0.9818;ERATE=0.0003;THETA=0.0002;AC=2042;AN=2184 GT:DS:GL:BD 0.93498170 1
1 169429000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7267;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169429035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0800;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0002;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169429128 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.7861;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169429144 rs72455455 A AAAAAAC 25813 PASS INDEL;BAVGPOST=0.840;BRSQ=0.666;LDAF=0.5801;AVGPOST=0.7537;RSQ=0.5572;ERATE=0.0931;THETA=0.0003;AC=1303;AN=2184 GT:DS:GL:BD 0.59661174 1
1 169429261 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5838;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169429287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3490;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169429455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169429558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169429644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0115;AVGPOST=0.9959;RSQ=0.8736;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169429680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5384;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169429779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0027;AVGPOST=0.9956;RSQ=0.3907;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169430041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.892;LDAF=0.0134;AVGPOST=0.9966;RSQ=0.9065;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169430074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9996;RSQ=0.9888;ERATE=0.0002;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169430112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5552;AVGPOST=0.9973;RSQ=0.9960;ERATE=0.0005;THETA=0.0002;AC=1214;AN=2184 GT:DS:GL:BD 0.55586082 1
1 169430204 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8601;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169430214 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169430286 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.5113;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169430348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169430374 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169430438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7911;AVGPOST=0.9986;RSQ=0.9963;ERATE=0.0006;THETA=0.0005;AC=1728;AN=2184 GT:DS:GL:BD 0.79120880 1
1 169430440 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2106;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0002;THETA=0.0001;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 169430484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169430520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8696;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169430811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6469;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169430816 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5496;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169430900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169430978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169431078 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169431107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8737;ERATE=0.0003;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169431109 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7493;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169431118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169431143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8285;ERATE=0.0007;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169431170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5716;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0004;THETA=0.0001;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 169431218 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1914;AVGPOST=0.9985;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 169431253 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8447;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169431346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0059;AVGPOST=0.9983;RSQ=0.8932;ERATE=0.0002;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169431363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5721;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 169431460 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0468;AVGPOST=0.9980;RSQ=0.9845;ERATE=0.0003;THETA=0.0003;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 169431471 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0163;AVGPOST=0.9986;RSQ=0.9720;ERATE=0.0002;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 169431557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0044;AVGPOST=0.9944;RSQ=0.5244;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169431599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0614;AVGPOST=0.9983;RSQ=0.9861;ERATE=0.0005;THETA=0.0003;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 169431762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.6031;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169431793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7922;AVGPOST=0.9988;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=1732;AN=2184 GT:DS:GL:BD 0.79304028 1
1 169431810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8151;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169431845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8176;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169431899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8234;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169431956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6729;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169432052 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8063;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169432300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0094;AVGPOST=0.9948;RSQ=0.7382;ERATE=0.0009;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169432479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0810;AVGPOST=0.9979;RSQ=0.9875;ERATE=0.0005;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 169432656 . AT A 559 PASS INDEL;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0087;AVGPOST=0.9950;RSQ=0.7663;ERATE=0.0008;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169432743 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.4908;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169432759 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8477;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169432965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169432979 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6737;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169433273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0787;AVGPOST=0.9986;RSQ=0.9925;ERATE=0.0004;THETA=0.0002;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169433285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169433473 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169433528 . C CA 292 PASS INDEL;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8165;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169433553 . TA T 124 PASS INDEL;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5540;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169433563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0059;AVGPOST=0.9987;RSQ=0.9171;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169433666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0068;AVGPOST=0.9965;RSQ=0.8127;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169433716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.3963;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169433816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169433841 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7193;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169433926 . AC A 95 PASS INDEL;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7175;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169434120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2239;AVGPOST=0.9977;RSQ=0.9950;ERATE=0.0003;THETA=0.0004;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 169434353 . A AC 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8224;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169434371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5134;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169434374 . T TA 29 PASS INDEL;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7351;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169434861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169434942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8405;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169435010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169435027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9954;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0005;THETA=0.0006;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 169435270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9931;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169435330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169435339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169435399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169435432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6925;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169435559 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169435934 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.886;LDAF=0.0117;AVGPOST=0.9985;RSQ=0.9532;ERATE=0.0004;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169436141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169436273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5536;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169436372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169436425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7044;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169436461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169436476 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169436506 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.6108;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169436546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7923;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=1732;AN=2184 GT:DS:GL:BD 0.79304028 1
1 169436561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169436592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0258;AVGPOST=0.9986;RSQ=0.9818;ERATE=0.0002;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 169436603 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1864;AVGPOST=0.9983;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 169436653 . AAAC A 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169436669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0081;AVGPOST=0.9985;RSQ=0.9368;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169436678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2111;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 169436775 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4399;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169436830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2174;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0002;THETA=0.0002;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 169436850 . GTGT G 136 PASS INDEL;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7433;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169436856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169436900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169436921 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9582;ERATE=0.0002;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169436922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169437153 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0594;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0002;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 169437286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169437300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=1.0000;RSQ=0.9920;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169437326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169437392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0159;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0002;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 169437436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169437574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9386;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169437593 rs71944465 CCTT C 8886 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0789;AVGPOST=0.9973;RSQ=0.9847;ERATE=0.0004;THETA=0.0006;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169437636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169437864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169437890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169437906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169437927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169438012 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169438025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0265;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 169438180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0787;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0002;THETA=0.0003;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169438273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169438390 . C CT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169438508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6828;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169438509 . T TAA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169438538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6323;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169438622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9279;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169438690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169438808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169438824 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169439050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169439087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169439115 . A AG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5326;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169439169 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169439174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169439183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169439226 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169439408 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169439444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169439509 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9900;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169439623 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169439659 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9637;ERATE=0.0002;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169439712 . CAA C 31 PASS INDEL;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0098;AVGPOST=0.9902;RSQ=0.6038;ERATE=0.0033;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169439790 rs35883281 AC A 5036 PASS INDEL;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0485;AVGPOST=0.9973;RSQ=0.9762;ERATE=0.0004;THETA=0.0002;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 169439827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169439920 . T TA 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8787;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169440107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9144;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169440174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5754;AVGPOST=0.9963;RSQ=0.9940;ERATE=0.0006;THETA=0.0066;AC=1256;AN=2184 GT:DS:GL:BD 0.57509160 1
1 169440440 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0073;AVGPOST=0.9983;RSQ=0.9061;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169440459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.616;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6960;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169440676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4165;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169440697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.5972;ERATE=0.0004;THETA=0.0081;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169440742 rs59833853 CACACAA C 184 PASS INDEL;BAVGPOST=0.946;BRSQ=0.346;LDAF=0.0689;AVGPOST=0.9109;RSQ=0.4323;ERATE=0.0147;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 169440778 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5953;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169441188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0355;AVGPOST=0.9983;RSQ=0.9806;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 169441252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6392;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169441265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5535;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169441285 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.797;LDAF=0.0088;AVGPOST=0.9973;RSQ=0.8707;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169441299 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2176;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0003;THETA=0.0007;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 169441328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9996;RSQ=0.9859;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169441533 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9176;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169441677 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3491;AVGPOST=0.9959;RSQ=0.9935;ERATE=0.0004;THETA=0.0003;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 169441685 . G GC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4578;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169441724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5245;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169441750 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5584;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169441767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5306;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169441815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169442211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1805;AVGPOST=0.9971;RSQ=0.9930;ERATE=0.0004;THETA=0.0059;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 169442323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0113;AVGPOST=0.9989;RSQ=0.9626;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169442390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.967;LDAF=0.0692;AVGPOST=0.9951;RSQ=0.9703;ERATE=0.0003;THETA=0.0007;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 169442558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0033;AVGPOST=0.9953;RSQ=0.4161;ERATE=0.0004;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169442670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169442698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1813;AVGPOST=0.9949;RSQ=0.9880;ERATE=0.0007;THETA=0.0007;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 169442762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0042;AVGPOST=0.9977;RSQ=0.7997;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169442812 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0050;AVGPOST=0.9981;RSQ=0.8630;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169442827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7717;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169442998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0040;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169443104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5908;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169443130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169443156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169443344 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5392;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169443457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6885;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169443683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169443932 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169444060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169444241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4740;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169444263 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169444461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5447;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169444546 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0032;AVGPOST=0.9968;RSQ=0.6006;ERATE=0.0008;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169444678 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.764;LDAF=0.0126;AVGPOST=0.9923;RSQ=0.7499;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169444738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0612;AVGPOST=0.9971;RSQ=0.9764;ERATE=0.0005;THETA=0.0004;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 169444953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169444965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4650;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169445100 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169445225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169445237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6594;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169445379 . A AT 64 PASS INDEL;BAVGPOST=0.990;BRSQ=0.214;LDAF=0.0298;AVGPOST=0.9563;RSQ=0.4466;ERATE=0.0015;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169445386 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.2127;AVGPOST=0.9968;RSQ=0.9941;ERATE=0.0004;THETA=0.0004;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 169445410 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1246;AVGPOST=0.9972;RSQ=0.9895;ERATE=0.0004;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 169445432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169445684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169445685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7234;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169445960 . AAAT A 58 PASS INDEL;BAVGPOST=0.993;BRSQ=0.591;LDAF=0.0218;AVGPOST=0.9723;RSQ=0.5050;ERATE=0.0032;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169446004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0444;AVGPOST=0.9988;RSQ=0.9878;ERATE=0.0002;THETA=0.0004;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 169446025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7335;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169446147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169446152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7966;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169446181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169446183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6090;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0012;AC=1333;AN=2184 GT:DS:GL:BD 0.61034799 1
1 169446232 rs111564572 TTGAA T 640 PASS INDEL;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0119;AVGPOST=0.9923;RSQ=0.7333;ERATE=0.0019;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169446281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0011;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169446311 . AC A 600 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8661;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169446384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169446387 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169446404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9892;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169446405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169446407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169446549 . AAAG A 108 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7530;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169446561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169446619 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169446639 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169446936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169447181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7290;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169447202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9081;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169447279 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1480;AVGPOST=0.9973;RSQ=0.9913;ERATE=0.0004;THETA=0.0003;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 169447291 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0048;AVGPOST=0.9973;RSQ=0.7628;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169447374 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0046;AVGPOST=0.9964;RSQ=0.6947;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169447761 rs66784327 A AT 627 PASS INDEL;BAVGPOST=0.506;BRSQ=0.142;LDAF=0.4080;AVGPOST=0.7522;RSQ=0.5583;ERATE=0.0100;THETA=0.0004;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 169447807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5134;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169447926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169448012 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6446;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169448028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6575;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169448137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0066;AVGPOST=0.9967;RSQ=0.8159;ERATE=0.0008;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169448346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5635;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169448377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1884;AVGPOST=0.9977;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 169448545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169448565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4169;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169448715 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5761;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169448758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5448;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169448901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5449;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169449119 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0071;AVGPOST=0.9993;RSQ=0.9548;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169449141 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169449348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9993;RSQ=0.9371;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169449544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5981;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169449619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.513;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5274;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169449676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0070;AVGPOST=0.9969;RSQ=0.8228;ERATE=0.0005;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169449750 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0072;AVGPOST=0.9968;RSQ=0.8121;ERATE=0.0007;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169449857 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4466;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169449870 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0579;AVGPOST=0.9992;RSQ=0.9936;ERATE=0.0002;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 169450022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0954;AVGPOST=0.9991;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 169450134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0050;AVGPOST=0.9994;RSQ=0.9514;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169450188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9179;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169450221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169450264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2133;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0002;THETA=0.0006;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 169450429 . TTCTC T 493 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0036;AVGPOST=0.9969;RSQ=0.6991;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169450435 . CTATT C 1476 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9420;ERATE=0.0003;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169450460 . AG A 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169450516 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169450604 . TG T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5008;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169450612 . TC T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169450801 . C CA 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.6615;ERATE=0.0006;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169450805 . A AT 294 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169450848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169450922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7056;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169450969 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5619;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169451086 . A AT 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169451098 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169451234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.6050;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169451308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.697;LDAF=0.0045;AVGPOST=0.9945;RSQ=0.5698;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169451372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4588;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169451387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0043;AVGPOST=0.9968;RSQ=0.7063;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169451570 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.8187;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169451694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.7995;AVGPOST=0.9919;RSQ=0.9801;ERATE=0.0006;THETA=0.0003;AC=1750;AN=2184 GT:DS:GL:BD 0.80128205 1
1 169451714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.800;LDAF=0.0656;AVGPOST=0.9717;RSQ=0.8579;ERATE=0.0005;THETA=0.0005;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 169451733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.816;LDAF=0.0041;AVGPOST=0.9955;RSQ=0.5519;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169451764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.823;LDAF=0.0090;AVGPOST=0.9974;RSQ=0.8966;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169451993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6034;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169452056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169452090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0958;AVGPOST=0.9990;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 169452184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2088;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0003;THETA=0.0008;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 169452188 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8433;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169452220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8672;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169452233 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0080;AVGPOST=0.9974;RSQ=0.8836;ERATE=0.0004;THETA=0.0056;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169452238 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5066;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169452239 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9842;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169452525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169452636 . C CA 8744 PASS INDEL;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.0981;AVGPOST=0.9978;RSQ=0.9903;ERATE=0.0006;THETA=0.0002;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 169452643 . AC A 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169452749 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4545;AVGPOST=0.9972;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=996;AN=2184 GT:DS:GL:BD 0.45604396 0
1 169452952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169453017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7995;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169453025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169453188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169453209 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1038;AVGPOST=0.9986;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 169453273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9172;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169453323 . TC T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169453477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169453555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0597;AVGPOST=0.9991;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 169453578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0788;AVGPOST=0.9991;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 169453703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.0790;AVGPOST=0.9991;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 169453739 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169453869 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0050;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169453956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5785;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169453967 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6813;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169453991 . AG A 2677 PASS INDEL;BAVGPOST=0.834;BRSQ=0.648;LDAF=0.2258;AVGPOST=0.8527;RSQ=0.7264;ERATE=0.0101;THETA=0.0003;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 169453994 rs66824610 GA G 44541 PASS INDEL;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4493;AVGPOST=0.9919;RSQ=0.9900;ERATE=0.0005;THETA=0.0006;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 169454000 . AT A 1635 PASS INDEL;BAVGPOST=0.872;BRSQ=0.646;LDAF=0.1634;AVGPOST=0.8812;RSQ=0.7170;ERATE=0.0077;THETA=0.0003;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 169454017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9416;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169454165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6160;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169454186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0088;AVGPOST=0.9952;RSQ=0.7878;ERATE=0.0007;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169454208 . A AG 5963 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0419;AVGPOST=0.9983;RSQ=0.9817;ERATE=0.0003;THETA=0.0017;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 169454272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0404;AVGPOST=0.9989;RSQ=0.9889;ERATE=0.0003;THETA=0.0020;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 169454314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7270;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169454366 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169454381 . G GA 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169454473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9887;ERATE=0.0002;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169454552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9357;ERATE=0.0002;THETA=0.0053;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169454625 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5335;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169454767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7623;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169454776 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4606;ERATE=0.0005;THETA=0.0089;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169455008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.942;LDAF=0.1630;AVGPOST=0.9771;RSQ=0.9357;ERATE=0.0024;THETA=0.0014;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 169455027 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.638;LDAF=0.0095;AVGPOST=0.9937;RSQ=0.7564;ERATE=0.0006;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169455118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0101;AVGPOST=0.9957;RSQ=0.8247;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169455199 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0065;AVGPOST=0.9992;RSQ=0.9454;ERATE=0.0003;THETA=0.0040;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169455311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8855;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169455361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5643;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169455430 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0034;AVGPOST=0.9957;RSQ=0.4369;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169455435 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4518;AVGPOST=0.9956;RSQ=0.9942;ERATE=0.0003;THETA=0.0006;AC=991;AN=2184 GT:DS:GL:BD 0.45375457 0
1 169455515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169455550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4488;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169455576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0076;AVGPOST=0.9989;RSQ=0.9458;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169455586 . A AT 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0030;AVGPOST=0.9954;RSQ=0.4137;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169455703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0038;AVGPOST=0.9981;RSQ=0.8158;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169455871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0002;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169455920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169455982 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8784;AVGPOST=0.9975;RSQ=0.9915;ERATE=0.0002;THETA=0.0010;AC=1918;AN=2184 GT:DS:GL:BD 0.87820512 1
1 169456046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4997;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=1090;AN=2184 GT:DS:GL:BD 0.49908423 0
1 169456212 . GTA G 283 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7759;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169456221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0276;AVGPOST=0.9996;RSQ=0.9928;ERATE=0.0002;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 169456224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169456393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.0661;AVGPOST=0.9987;RSQ=0.9904;ERATE=0.0004;THETA=0.0003;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 169456541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169456655 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6489;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169456659 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169456717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0840;AVGPOST=0.9991;RSQ=0.9951;ERATE=0.0004;THETA=0.0003;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 169456785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2269;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0007;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 169456813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169456822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9996;RSQ=0.9617;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169456941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8824;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169457028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1983;AVGPOST=0.9926;RSQ=0.9842;ERATE=0.0006;THETA=0.0005;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 169457040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0112;AVGPOST=0.9990;RSQ=0.9636;ERATE=0.0002;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169457063 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6602;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169457184 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0039;AVGPOST=0.9971;RSQ=0.7120;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169457312 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8482;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169457428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8123;ERATE=0.0007;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169457580 . A AT 805 PASS INDEL;BAVGPOST=0.997;BRSQ=0.820;LDAF=0.0070;AVGPOST=0.9981;RSQ=0.8825;ERATE=0.0005;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169457596 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4528;AVGPOST=0.9958;RSQ=0.9953;ERATE=0.0006;THETA=0.0002;AC=991;AN=2184 GT:DS:GL:BD 0.45375457 0
1 169457644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7561;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169457814 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169457822 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169457862 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0525;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0002;THETA=0.0017;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 169457933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0134;AVGPOST=0.9987;RSQ=0.9600;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169458425 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169458508 . ATTG A 623 PASS INDEL;BAVGPOST=0.997;BRSQ=0.761;LDAF=0.0050;AVGPOST=0.9964;RSQ=0.7426;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169458598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.8078;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169458653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.8018;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169458890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4609;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169458910 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0529;AVGPOST=0.9993;RSQ=0.9939;ERATE=0.0004;THETA=0.0016;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 169458911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0043;AVGPOST=0.9972;RSQ=0.7392;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169458979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7755;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169459103 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1804;AVGPOST=0.9933;RSQ=0.9810;ERATE=0.0009;THETA=0.0092;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 169459181 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2246;AVGPOST=0.9974;RSQ=0.9957;ERATE=0.0003;THETA=0.0094;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 169459649 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0538;AVGPOST=0.9988;RSQ=0.9885;ERATE=0.0004;THETA=0.0085;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 169459817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.948;LDAF=0.5343;AVGPOST=0.9231;RSQ=0.9101;ERATE=0.0079;THETA=0.0073;AC=1185;AN=2184 GT:DS:GL:BD 0.54258239 1
1 169459849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.508;LDAF=0.0029;AVGPOST=0.9952;RSQ=0.4066;ERATE=0.0006;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169459873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7813;ERATE=0.0004;THETA=0.0083;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169459912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.596;LDAF=0.0070;AVGPOST=0.9929;RSQ=0.6140;ERATE=0.0009;THETA=0.0044;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169460043 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0566;AVGPOST=0.9969;RSQ=0.9789;ERATE=0.0005;THETA=0.0047;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 169460165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0087;AVGPOST=0.9995;RSQ=0.9786;ERATE=0.0003;THETA=0.0036;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169460223 . A AC 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5789;ERATE=0.0002;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169460406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.6043;AVGPOST=0.9978;RSQ=0.9967;ERATE=0.0003;THETA=0.0018;AC=1317;AN=2184 GT:DS:GL:BD 0.60302198 1
1 169460423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2173;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 169460595 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.8159;ERATE=0.0002;THETA=0.0043;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169460612 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169460618 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0044;AVGPOST=0.9977;RSQ=0.7924;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169460645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1794;AVGPOST=0.9963;RSQ=0.9901;ERATE=0.0003;THETA=0.0003;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 169460724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.4861;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169460726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.9383;AVGPOST=0.9984;RSQ=0.9896;ERATE=0.0003;THETA=0.0002;AC=2049;AN=2184 GT:DS:GL:BD 0.93818682 1
1 169460821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5285;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169460824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6818;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169460855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8908;ERATE=0.0004;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169460865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0707;AVGPOST=0.9989;RSQ=0.9927;ERATE=0.0004;THETA=0.0002;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 169460903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0086;AVGPOST=0.9989;RSQ=0.9443;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169460920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8987;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169460926 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169461089 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6535;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169461197 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7891;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169461361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8930;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169461382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9438;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169461406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3788;AVGPOST=0.9954;RSQ=0.9937;ERATE=0.0007;THETA=0.0005;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 169461429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0054;AVGPOST=0.9980;RSQ=0.8648;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169461435 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169461458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6868;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169461481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0540;AVGPOST=0.9994;RSQ=0.9946;ERATE=0.0003;THETA=0.0005;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 169461590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7786;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169461639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169461741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0088;AVGPOST=0.9991;RSQ=0.9536;ERATE=0.0002;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169461835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5756;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169461901 . TCTG T 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169461913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169461922 rs35889936 AT A 17016 PASS INDEL;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.1735;AVGPOST=0.9945;RSQ=0.9841;ERATE=0.0009;THETA=0.0015;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 169462008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169462095 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7714;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169462221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169462267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169462403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9423;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169462431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2026;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 169462509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8717;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169462519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169462819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.688;LDAF=0.0142;AVGPOST=0.9806;RSQ=0.4602;ERATE=0.0050;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169462831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169462834 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169462911 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3204;AVGPOST=0.9900;RSQ=0.9815;ERATE=0.0018;THETA=0.0003;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 169462983 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169462985 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7538;ERATE=0.0002;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169463064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7868;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169463221 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4573;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169463296 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.920;LDAF=0.0545;AVGPOST=0.9907;RSQ=0.9307;ERATE=0.0005;THETA=0.0005;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 169463393 . CACAA C 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7358;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169463499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0160;AVGPOST=0.9990;RSQ=0.9782;ERATE=0.0002;THETA=0.0051;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169463518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.920;LDAF=0.8089;AVGPOST=0.9579;RSQ=0.9053;ERATE=0.0040;THETA=0.0008;AC=1780;AN=2184 GT:DS:GL:BD 0.81501830 1
1 169463519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.920;LDAF=0.8081;AVGPOST=0.9614;RSQ=0.9136;ERATE=0.0037;THETA=0.0007;AC=1776;AN=2184 GT:DS:GL:BD 0.81318682 1
1 169463520 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6135;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169463651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9729;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169463727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6652;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169463819 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0091;AVGPOST=0.9989;RSQ=0.9544;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169463842 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0067;AVGPOST=0.9995;RSQ=0.9615;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169463871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169463948 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0568;AVGPOST=0.9990;RSQ=0.9924;ERATE=0.0003;THETA=0.0007;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 169464005 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0061;AVGPOST=0.9979;RSQ=0.8497;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169464006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0128;AVGPOST=0.9959;RSQ=0.8721;ERATE=0.0005;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169464156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6704;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169464164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0074;AVGPOST=0.9962;RSQ=0.8243;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169464183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0028;AVGPOST=0.9968;RSQ=0.4594;ERATE=0.0008;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169464278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0567;AVGPOST=0.9992;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 169464351 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2144;AVGPOST=0.9947;RSQ=0.9894;ERATE=0.0004;THETA=0.0013;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 169464445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5013;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169464509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169464576 . TGA T 298 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169464632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169464820 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9885;ERATE=0.0002;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169464888 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0174;AVGPOST=0.9987;RSQ=0.9675;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169465012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169465050 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169465158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9877;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169465256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7624;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169465265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0168;AVGPOST=0.9990;RSQ=0.9802;ERATE=0.0003;THETA=0.0001;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 169465306 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7386;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169465319 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7348;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169465431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8753;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169465465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9831;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169465475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0002;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169465707 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4936;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169465756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169465877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169465952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5273;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169465986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0003;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169465997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2643;AVGPOST=0.9922;RSQ=0.9836;ERATE=0.0011;THETA=0.0012;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 169466043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9845;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169466065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0002;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169466140 . T TG 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5720;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169466302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0002;THETA=0.0045;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169466420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8059;ERATE=0.0002;THETA=0.0086;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169466426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8456;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169466441 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8468;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169466444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0171;AVGPOST=0.9991;RSQ=0.9764;ERATE=0.0004;THETA=0.0015;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169466540 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0166;AVGPOST=0.9983;RSQ=0.9531;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 169466837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4605;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169466857 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.0648;ERATE=0.0003;THETA=0.0044;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169466960 . CA C 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169466981 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0542;AVGPOST=0.9989;RSQ=0.9920;ERATE=0.0003;THETA=0.0037;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 169467168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0535;AVGPOST=0.9986;RSQ=0.9912;ERATE=0.0002;THETA=0.0014;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 169467225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7413;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169467259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0002;THETA=0.0160;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169467276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0073;AVGPOST=0.9977;RSQ=0.8658;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169467529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9122;ERATE=0.0002;THETA=0.0040;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169467571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0002;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169467610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.972;LDAF=0.0487;AVGPOST=0.9973;RSQ=0.9789;ERATE=0.0004;THETA=0.0125;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 169467654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.9941;AVGPOST=0.9992;RSQ=0.9549;ERATE=0.0003;THETA=0.0082;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 169467689 . AC A 130 PASS INDEL;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8481;ERATE=0.0003;THETA=0.0090;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169467927 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0003;THETA=0.0138;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169467975 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.938;LDAF=0.0451;AVGPOST=0.9917;RSQ=0.9344;ERATE=0.0004;THETA=0.0139;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 169468063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8009;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169468225 . C CA 121 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6843;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169468285 . AAAAG A 935 PASS INDEL;BAVGPOST=0.998;BRSQ=0.821;LDAF=0.0055;AVGPOST=0.9981;RSQ=0.8689;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169468305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5496;ERATE=0.0003;THETA=0.0099;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169468403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4772;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169468413 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5596;ERATE=0.0003;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169468474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0100;AVGPOST=0.9963;RSQ=0.8420;ERATE=0.0006;THETA=0.0013;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169468539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0041;AVGPOST=0.9980;RSQ=0.8131;ERATE=0.0003;THETA=0.0022;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169468586 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6899;ERATE=0.0004;THETA=0.0107;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169468718 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2317;AVGPOST=0.9962;RSQ=0.9937;ERATE=0.0003;THETA=0.0014;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 169468730 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9401;ERATE=0.0002;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169468920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9443;ERATE=0.0003;THETA=0.0025;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169468924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169468929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0095;AVGPOST=0.9984;RSQ=0.9286;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169468941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7312;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169469070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169469072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0031;AVGPOST=0.9997;RSQ=0.9556;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169469142 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2479;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0002;THETA=0.0012;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 169469258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8205;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169469267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9565;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169469281 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169469495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169469621 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2519;AVGPOST=0.9973;RSQ=0.9944;ERATE=0.0006;THETA=0.0004;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 169469683 . C CT 6150 PASS INDEL;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0529;AVGPOST=0.9983;RSQ=0.9856;ERATE=0.0004;THETA=0.0003;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 169469793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7909;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169469985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8323;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169469987 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0666;AVGPOST=0.9983;RSQ=0.9898;ERATE=0.0004;THETA=0.0003;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 169470047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.7137;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169470204 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.7952;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169470208 . CAAAT C 1184 PASS INDEL;BAVGPOST=0.976;BRSQ=0.642;LDAF=0.0449;AVGPOST=0.9852;RSQ=0.8714;ERATE=0.0007;THETA=0.0005;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 169470216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0088;AVGPOST=0.9939;RSQ=0.7262;ERATE=0.0010;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169470317 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2521;AVGPOST=0.9887;RSQ=0.9758;ERATE=0.0025;THETA=0.0002;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 169470336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.692;LDAF=0.0051;AVGPOST=0.9958;RSQ=0.7015;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169470420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.790;LDAF=0.0095;AVGPOST=0.9958;RSQ=0.8286;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169470424 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0041;AVGPOST=0.9973;RSQ=0.7614;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169470543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7213;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169470734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0540;AVGPOST=0.9988;RSQ=0.9911;ERATE=0.0003;THETA=0.0007;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 169470748 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9641;AVGPOST=0.9995;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=2106;AN=2184 GT:DS:GL:BD 0.96428573 1
1 169470756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7380;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169470807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8219;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169470872 . GC G 429 PASS INDEL;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0095;AVGPOST=0.9969;RSQ=0.8743;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169470873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9087;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169470936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.810;LDAF=0.0043;AVGPOST=0.9969;RSQ=0.7025;ERATE=0.0013;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169470992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0529;AVGPOST=0.9991;RSQ=0.9918;ERATE=0.0004;THETA=0.0005;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 169471074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.515;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169471109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.858;LDAF=0.0456;AVGPOST=0.9888;RSQ=0.9058;ERATE=0.0004;THETA=0.0007;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 169471125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.959;LDAF=0.0720;AVGPOST=0.9968;RSQ=0.9831;ERATE=0.0004;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 169471241 . C CA 19007 PASS INDEL;BAVGPOST=0.991;BRSQ=0.978;LDAF=0.2532;AVGPOST=0.9910;RSQ=0.9815;ERATE=0.0012;THETA=0.0004;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 169471282 . GA G 244 PASS INDEL;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9375;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169471879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0178;AVGPOST=0.9973;RSQ=0.9468;ERATE=0.0005;THETA=0.0001;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169471917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2515;AVGPOST=0.9975;RSQ=0.9947;ERATE=0.0006;THETA=0.0002;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 169472163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0100;AVGPOST=0.9979;RSQ=0.9096;ERATE=0.0008;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169472178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.5768;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169472214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169472271 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8666;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169472272 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169472304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0496;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 169472319 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0532;AVGPOST=0.9986;RSQ=0.9887;ERATE=0.0004;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 169472452 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0088;AVGPOST=0.9979;RSQ=0.9103;ERATE=0.0004;THETA=0.0013;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169472471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2506;AVGPOST=0.9967;RSQ=0.9928;ERATE=0.0004;THETA=0.0004;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 169472679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0255;AVGPOST=0.9980;RSQ=0.9650;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 169472708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.223;LDAF=0.9835;AVGPOST=0.9733;RSQ=0.3699;ERATE=0.0021;THETA=0.0002;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 169472770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8029;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169472898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9495;ERATE=0.0003;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169472899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9374;AVGPOST=0.9987;RSQ=0.9907;ERATE=0.0003;THETA=0.0002;AC=2048;AN=2184 GT:DS:GL:BD 0.93772894 1
1 169472946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9397;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169472963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.6547;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169472968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9480;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169473099 . CAT C 58 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5412;ERATE=0.0008;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169473140 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.5245;AVGPOST=0.9949;RSQ=0.9926;ERATE=0.0007;THETA=0.0003;AC=1145;AN=2184 GT:DS:GL:BD 0.52426738 1
1 169473196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.5250;AVGPOST=0.9933;RSQ=0.9899;ERATE=0.0008;THETA=0.0005;AC=1147;AN=2184 GT:DS:GL:BD 0.52518314 1
1 169473305 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6156;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169473315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.7865;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169473418 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5306;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169473475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169473503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2522;AVGPOST=0.9979;RSQ=0.9954;ERATE=0.0008;THETA=0.0002;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 169473520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5261;AVGPOST=0.9962;RSQ=0.9943;ERATE=0.0007;THETA=0.0005;AC=1148;AN=2184 GT:DS:GL:BD 0.52564102 1
1 169473761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0534;AVGPOST=0.9985;RSQ=0.9886;ERATE=0.0004;THETA=0.0005;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 169473930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6193;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169473957 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8085;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169474068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0042;AVGPOST=0.9981;RSQ=0.8313;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169474120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0529;AVGPOST=0.9992;RSQ=0.9930;ERATE=0.0003;THETA=0.0002;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 169474347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5797;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169474354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2279;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 169474397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0126;AVGPOST=0.9988;RSQ=0.9585;ERATE=0.0004;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169474398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7972;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169474545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5408;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169474725 . AG A 421 PASS INDEL;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0040;AVGPOST=0.9974;RSQ=0.7665;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169474727 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7281;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169474752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5629;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169474891 . TC T 906 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.9268;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169474893 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0074;AVGPOST=0.9981;RSQ=0.9104;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169474976 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.666;LDAF=0.0174;AVGPOST=0.9830;RSQ=0.6325;ERATE=0.0051;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169475034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6686;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169475135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6517;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169475187 . G GA 695 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9186;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169475203 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7864;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169475274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169475489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0058;AVGPOST=0.9971;RSQ=0.7876;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169475712 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.4335;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169475782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169475815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0263;AVGPOST=0.9973;RSQ=0.9693;ERATE=0.0002;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 169475850 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9413;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169475925 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8462;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169476052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9384;AVGPOST=0.9993;RSQ=0.9943;ERATE=0.0004;THETA=0.0003;AC=2050;AN=2184 GT:DS:GL:BD 0.93864471 1
1 169476174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0084;AVGPOST=0.9990;RSQ=0.9522;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169476245 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0782;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0002;THETA=0.0003;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 169476326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.3014;AVGPOST=0.9957;RSQ=0.9922;ERATE=0.0006;THETA=0.0004;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 169476473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.5805;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169476482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169476532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0096;AVGPOST=0.9981;RSQ=0.9280;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169476535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7799;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169476731 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.1926;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169476760 . G GC 141 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3999;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169476779 . AG A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4622;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169476841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169476857 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8359;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169476926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9602;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169477110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0102;AVGPOST=0.9995;RSQ=0.9784;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169477333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0121;AVGPOST=0.9992;RSQ=0.9688;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169477425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7742;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169477433 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6535;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169477537 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7885;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169477560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8494;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169477574 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9386;AVGPOST=0.9994;RSQ=0.9950;ERATE=0.0004;THETA=0.0002;AC=2050;AN=2184 GT:DS:GL:BD 0.93864471 1
1 169477599 . C CT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6211;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169477642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7749;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169477752 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0002;THETA=0.0011;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169477770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7370;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169477837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0002;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169477897 . T TC 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5038;ERATE=0.0006;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169477941 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169478042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0744;AVGPOST=0.9973;RSQ=0.9859;ERATE=0.0003;THETA=0.0003;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 169478105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0526;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0002;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 169478261 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0809;AVGPOST=0.9970;RSQ=0.9829;ERATE=0.0003;THETA=0.0002;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 169478380 . TA T 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3178;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169478388 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9731;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169478609 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5285;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169478642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169478654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2516;AVGPOST=0.9985;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 169478781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0527;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 169478911 . GC G 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169478914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5522;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169479018 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8388;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169479154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7809;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169479519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0105;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169479543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0152;AVGPOST=0.9996;RSQ=0.9874;ERATE=0.0002;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169479590 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9695;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169479606 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8790;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169479659 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9262;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169479804 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0727;AVGPOST=0.9980;RSQ=0.9906;ERATE=0.0002;THETA=0.0003;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 169479860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169479974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.9633;AVGPOST=0.9987;RSQ=0.9879;ERATE=0.0003;THETA=0.0003;AC=2105;AN=2184 GT:DS:GL:BD 0.96382785 1
1 169480026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5281;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169480045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2515;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0005;THETA=0.0002;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 169480119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169480132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6955;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169480229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169480348 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169480369 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169480371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0760;AVGPOST=0.9985;RSQ=0.9916;ERATE=0.0004;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 169480539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0083;AVGPOST=0.9996;RSQ=0.9790;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169480690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169480741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5693;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169480786 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169480893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6663;ERATE=0.0002;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169480898 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169481070 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169481121 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.9215;AVGPOST=0.9981;RSQ=0.9908;ERATE=0.0004;THETA=0.0002;AC=2014;AN=2184 GT:DS:GL:BD 0.92216116 1
1 169481137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9723;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169481176 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.9221;AVGPOST=0.9994;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=2014;AN=2184 GT:DS:GL:BD 0.92216116 1
1 169481204 . CT C 44 PASS INDEL;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7640;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169481223 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9212;AVGPOST=0.9991;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=2012;AN=2184 GT:DS:GL:BD 0.92124540 1
1 169481357 . A AC 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5134;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169481528 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5864;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169481626 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169481694 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5524;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169481731 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0533;AVGPOST=0.9990;RSQ=0.9935;ERATE=0.0003;THETA=0.0006;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 169481890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8736;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169481950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2540;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 169482063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9524;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169482115 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2268;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 169482261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0050;AVGPOST=0.9967;RSQ=0.7364;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169482305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0522;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0002;THETA=0.0004;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 169482381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169482419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169482433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0160;AVGPOST=0.9989;RSQ=0.9788;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169482436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5254;AVGPOST=0.9916;RSQ=0.9879;ERATE=0.0030;THETA=0.0002;AC=1148;AN=2184 GT:DS:GL:BD 0.52564102 1
1 169482450 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7753;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169482477 . TC T 129 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7422;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169482480 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169482660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8585;ERATE=0.0020;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169482678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0521;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 169482756 . G GACC 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169482821 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6754;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169482834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169482970 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8188;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169482997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169483070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169483075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0094;AVGPOST=0.9984;RSQ=0.9210;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169483110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169483155 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5802;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169483175 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0047;AVGPOST=0.9993;RSQ=0.9334;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169483188 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8786;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169483263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169483335 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9148;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169483561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0489;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 169483588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169483672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=1.0000;RSQ=0.9940;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169483762 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0490;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0002;THETA=0.0001;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 169483844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2539;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0002;THETA=0.0003;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 169483933 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8515;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169484078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0039;AVGPOST=0.9969;RSQ=0.7160;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169484122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0002;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169484175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169484244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5377;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169484245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169484354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169484372 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169484462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=1.0000;RSQ=0.9978;ERATE=0.0002;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169484552 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3109;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0002;THETA=0.0003;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 169484721 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169484758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169484767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0119;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0002;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169484900 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169484969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9672;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169485250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169485253 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5849;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169485400 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5362;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 169485625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9718;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169485626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0050;AVGPOST=0.9973;RSQ=0.7837;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169485681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.8997;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169485766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6982;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169485859 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5344;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=1166;AN=2184 GT:DS:GL:BD 0.53388280 1
1 169485866 . A AT 179 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5491;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169485938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5877;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169486021 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.825;LDAF=0.0140;AVGPOST=0.9960;RSQ=0.8895;ERATE=0.0005;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169486128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0751;AVGPOST=0.9983;RSQ=0.9923;ERATE=0.0002;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 169486141 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0493;AVGPOST=0.9991;RSQ=0.9923;ERATE=0.0003;THETA=0.0002;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 169486220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8635;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169486244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169486439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.6194;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169486467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169486481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7609;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169486501 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2595;AVGPOST=0.9985;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 169486624 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7128;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169486641 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9697;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 169486767 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3110;AVGPOST=0.9969;RSQ=0.9945;ERATE=0.0010;THETA=0.0005;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 169486792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169486858 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8904;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169486946 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.842;LDAF=0.0102;AVGPOST=0.9956;RSQ=0.8145;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169487017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169487050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4467;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169487053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7054;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169487254 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169487298 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169487405 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6753;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169487619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169487673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169487686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169487736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169487821 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0521;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 169487840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169488136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8968;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169488227 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5696;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169488348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169488365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169488417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8647;ERATE=0.0004;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169488582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169488659 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169488664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0168;AVGPOST=0.9987;RSQ=0.9704;ERATE=0.0004;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 169488785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9550;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169488895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169488924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0650;AVGPOST=0.9980;RSQ=0.9890;ERATE=0.0003;THETA=0.0002;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 169488927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5380;AVGPOST=0.9967;RSQ=0.9950;ERATE=0.0007;THETA=0.0003;AC=1174;AN=2184 GT:DS:GL:BD 0.53754580 1
1 169488969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6420;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169489023 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0522;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 169489040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169489153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169489203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0522;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0002;THETA=0.0003;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 169489209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169489358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.2423;AVGPOST=0.9977;RSQ=0.9951;ERATE=0.0005;THETA=0.0007;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 169489409 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8731;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169489477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9678;ERATE=0.0004;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169489489 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0493;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0002;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 169489512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2425;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0002;THETA=0.0002;AC=530;AN=2184 GT:DS:GL:BD 0.24267399 0
1 169489543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169489585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2432;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 169489722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169489742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169489743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169489751 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169489911 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169489946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2017;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 169490063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169490119 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9998;RSQ=0.9822;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169490188 . C CG 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6306;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169490265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7605;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169490306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169490357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9283;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169490382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8505;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169490384 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169490392 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9639;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0002;THETA=0.0004;AC=2105;AN=2184 GT:DS:GL:BD 0.96382785 1
1 169490397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169490401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9356;AVGPOST=0.9990;RSQ=0.9934;ERATE=0.0003;THETA=0.0002;AC=2044;AN=2184 GT:DS:GL:BD 0.93589741 1
1 169490462 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7818;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169490592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2463;AVGPOST=0.9977;RSQ=0.9945;ERATE=0.0006;THETA=0.0002;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 169490601 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0493;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 169490670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8074;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169490731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.796;LDAF=0.0059;AVGPOST=0.9965;RSQ=0.7578;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169490756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4352;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169490772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3785;AVGPOST=0.9955;RSQ=0.9941;ERATE=0.0004;THETA=0.0003;AC=828;AN=2184 GT:DS:GL:BD 0.37912089 0
1 169490896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0039;AVGPOST=0.9957;RSQ=0.5500;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169490952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3930;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169491021 rs9332652 A AT 12751 PASS INDEL;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2482;AVGPOST=0.9912;RSQ=0.9812;ERATE=0.0009;THETA=0.0002;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 169491026 . T TC 10 PASS INDEL;BAVGPOST=0.959;BRSQ=0.219;LDAF=0.0266;AVGPOST=0.9688;RSQ=0.5195;ERATE=0.0021;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 169491109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0080;AVGPOST=0.9987;RSQ=0.9129;ERATE=0.0005;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169491149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2443;AVGPOST=0.9942;RSQ=0.9870;ERATE=0.0015;THETA=0.0001;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 169491156 . CAAG C 82 PASS INDEL;BAVGPOST=0.966;BRSQ=0.048;LDAF=0.0711;AVGPOST=0.9099;RSQ=0.4935;ERATE=0.0022;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 169491179 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0726;AVGPOST=0.9961;RSQ=0.9794;ERATE=0.0007;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 169491252 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9150;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169491277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169491331 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0509;AVGPOST=0.9988;RSQ=0.9909;ERATE=0.0004;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 169491346 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0061;AVGPOST=0.9957;RSQ=0.7843;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169491469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169491555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.966;LDAF=0.9697;AVGPOST=0.9994;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 169491689 . TTTTC T 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.2804;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169491799 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0165;AVGPOST=0.9980;RSQ=0.9580;ERATE=0.0004;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169491830 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5783;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169491927 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8372;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169491974 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6123;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169492099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9551;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169492100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1917;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0004;THETA=0.0011;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 169492123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0514;AVGPOST=0.9993;RSQ=0.9943;ERATE=0.0003;THETA=0.0002;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 169492157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169492236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9997;RSQ=0.9740;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169492246 . TTC T 9128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2267;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 169492250 rs9332645 CTCTT C 48112 PASS INDEL;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2269;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 169492356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9406;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169492400 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169492534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169492615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169492676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2436;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0003;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 169492739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9655;ERATE=0.0002;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169492920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169492924 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169492946 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169493028 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169493210 . T TA 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5917;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169493324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169493509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169493713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0513;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 169493726 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3117;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 169493733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169493822 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169493866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9217;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169493872 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169493879 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169493895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0492;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0002;THETA=0.0002;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 169493900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169493953 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3117;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0003;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 169494001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169494140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169494174 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169494196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5329;AVGPOST=0.9989;RSQ=0.9989;ERATE=0.0006;THETA=0.0006;AC=1165;AN=2184 GT:DS:GL:BD 0.53342491 1
1 169494232 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169494364 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169494384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0485;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0029;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 169494391 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169494403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2309;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0002;THETA=0.0002;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 169494466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5693;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169494500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.973;LDAF=0.0790;AVGPOST=0.9904;RSQ=0.9508;ERATE=0.0030;THETA=0.0005;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 169494501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0505;AVGPOST=0.9988;RSQ=0.9899;ERATE=0.0004;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 169494506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7794;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169494547 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8633;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169494589 rs9332638 GA G 1540 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9972;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169494742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169494767 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9271;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169494808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0494;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0002;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 169494881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169494916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169494996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169495001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169495161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169495280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169495369 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169495375 . A AT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0025;AVGPOST=0.9971;RSQ=0.5189;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169495433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2441;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0002;THETA=0.0003;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 169495569 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0101;AVGPOST=0.9989;RSQ=0.9625;ERATE=0.0002;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169495651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169495667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.817;LDAF=0.0137;AVGPOST=0.9942;RSQ=0.8269;ERATE=0.0005;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169495716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6474;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169495950 . GT G 1589 PASS INDEL;BAVGPOST=0.984;BRSQ=0.733;LDAF=0.0279;AVGPOST=0.9846;RSQ=0.7997;ERATE=0.0007;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 169496068 . TTCTG T 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3033;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169496122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5769;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169496185 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0163;AVGPOST=0.9986;RSQ=0.9732;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 169496211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7478;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169496253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3124;AVGPOST=0.9975;RSQ=0.9959;ERATE=0.0005;THETA=0.0002;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 169496274 . CACA C 182 PASS INDEL;BAVGPOST=0.997;BRSQ=0.729;LDAF=0.0054;AVGPOST=0.9964;RSQ=0.7115;ERATE=0.0014;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169496371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9476;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169496536 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7130;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169496539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169496581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0035;AVGPOST=0.9972;RSQ=0.6745;ERATE=0.0018;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169496676 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9742;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169496766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169496786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169496800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169496882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8406;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169496963 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169497025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169497066 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169497194 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169497292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169497321 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169497385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169497614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0494;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 169497628 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169497731 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2304;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 169497820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2444;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 169497849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0209;AVGPOST=0.9994;RSQ=0.9916;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 169497926 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2401;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 169497949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9040;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169497958 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0216;AVGPOST=0.9990;RSQ=0.9858;ERATE=0.0003;THETA=0.0001;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 169498034 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9138;ERATE=0.0002;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169498056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.9699;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0003;THETA=0.0001;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 169498096 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0002;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169498181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2409;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 169498219 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169498229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169498239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9690;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169498360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2012;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0002;THETA=0.0003;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 169498414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8075;ERATE=0.0012;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169498418 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169498433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0237;AVGPOST=0.9989;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 169498466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8086;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169498537 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169498595 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169498664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9740;ERATE=0.0003;THETA=0.0001;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169498717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169498834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.9118;AVGPOST=0.9938;RSQ=0.9760;ERATE=0.0028;THETA=0.0004;AC=1992;AN=2184 GT:DS:GL:BD 0.91208792 1
1 169498835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1939;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0080;THETA=0.0002;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 169498975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2925;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0005;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 169499020 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8998;ERATE=0.0002;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169499060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169499128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169499190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.5328;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0002;THETA=0.0002;AC=1165;AN=2184 GT:DS:GL:BD 0.53342491 1
1 169499231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169499251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169499381 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2423;AVGPOST=0.9983;RSQ=0.9958;ERATE=0.0005;THETA=0.0003;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 169499509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169499623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9340;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169499659 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5317;AVGPOST=0.9955;RSQ=0.9942;ERATE=0.0020;THETA=0.0003;AC=1164;AN=2184 GT:DS:GL:BD 0.53296703 1
1 169499695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0511;AVGPOST=0.9993;RSQ=0.9944;ERATE=0.0002;THETA=0.0006;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 169499710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169499854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169499951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2428;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0002;THETA=0.0004;AC=530;AN=2184 GT:DS:GL:BD 0.24267399 0
1 169500010 . A AG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6471;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169500056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169500173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169500178 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8998;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169500192 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169500210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0849;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 169500232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169500280 . AC A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3753;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169500348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2427;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=530;AN=2184 GT:DS:GL:BD 0.24267399 0
1 169500358 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0002;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169500394 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169500459 . AC A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6950;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169500481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0737;AVGPOST=0.9994;RSQ=0.9961;ERATE=0.0002;THETA=0.0005;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 169500482 rs9332617 CT C 2299 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0164;AVGPOST=0.9974;RSQ=0.9385;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169500590 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9368;AVGPOST=0.9992;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=2046;AN=2184 GT:DS:GL:BD 0.93681318 1
1 169500744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8524;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169500768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169500777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0002;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169500811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169500873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169500929 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0517;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0002;THETA=0.0003;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 169501054 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0224;AVGPOST=0.9991;RSQ=0.9855;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 169501056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2997;AVGPOST=0.9951;RSQ=0.9917;ERATE=0.0017;THETA=0.0003;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 169501069 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0070;AVGPOST=0.9994;RSQ=0.9617;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169501148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0053;AVGPOST=0.9988;RSQ=0.9118;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169501364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6934;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169501426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0022;AVGPOST=0.9998;RSQ=0.9570;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169501457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8771;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169501512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9373;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169501569 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0516;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0002;THETA=0.0013;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 169501674 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8054;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169501700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2263;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 169501921 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169501971 . C CA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7363;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169501986 . AC A 287 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7804;ERATE=0.0008;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169501995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1470;AVGPOST=0.9981;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 169502032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0476;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 169502139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8754;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169502264 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169502403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0476;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 169502419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8242;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169502454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5238;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169502496 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7995;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169502533 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2460;AVGPOST=0.9960;RSQ=0.9921;ERATE=0.0010;THETA=0.0003;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 169502702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0037;AVGPOST=0.9968;RSQ=0.7215;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169502785 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.9130;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169502942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9486;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169502961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8142;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169503010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6870;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169503213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0047;AVGPOST=0.9940;RSQ=0.5664;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169503243 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6586;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169503248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8880;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169503259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0084;AVGPOST=0.9991;RSQ=0.9550;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169503380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169503395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0072;AVGPOST=0.9984;RSQ=0.9082;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169503460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0123;AVGPOST=0.9974;RSQ=0.9289;ERATE=0.0002;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169503462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0033;AVGPOST=0.9961;RSQ=0.5670;ERATE=0.0011;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169503496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0060;AVGPOST=0.9993;RSQ=0.9475;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169503616 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2481;AVGPOST=0.9979;RSQ=0.9952;ERATE=0.0005;THETA=0.0003;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 169503631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4540;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169503650 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2289;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 169503726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.603;LDAF=0.0243;AVGPOST=0.9695;RSQ=0.5068;ERATE=0.0064;THETA=0.0018;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169503809 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0059;AVGPOST=0.9927;RSQ=0.5140;ERATE=0.0009;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169503969 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9709;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169503978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9498;ERATE=0.0002;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169504015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8572;ERATE=0.0015;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169504108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8681;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169504135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9997;RSQ=0.9726;ERATE=0.0002;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169504320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7503;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169504321 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0468;AVGPOST=0.9969;RSQ=0.9753;ERATE=0.0003;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 169504322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0467;AVGPOST=0.9970;RSQ=0.9766;ERATE=0.0003;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 169504342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169504403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169504715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169504735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169504740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5852;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169504754 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.4969;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169504774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169504829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2440;AVGPOST=0.9969;RSQ=0.9932;ERATE=0.0006;THETA=0.0028;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 169504862 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9999;RSQ=0.9826;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169504881 . T TC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5384;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169505037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169505070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.9101;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169505077 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169505158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5362;AVGPOST=0.9958;RSQ=0.9942;ERATE=0.0004;THETA=0.0002;AC=1173;AN=2184 GT:DS:GL:BD 0.53708792 1
1 169505201 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.8003;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169505295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169505406 . GCCA G 17 PASS INDEL;BAVGPOST=0.994;BRSQ=0.767;LDAF=0.0062;AVGPOST=0.9919;RSQ=0.4997;ERATE=0.0012;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169505498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9806;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169505530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9183;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169505647 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169505678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169505792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169505872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169505880 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169505902 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169505938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169506241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2988;AVGPOST=0.9882;RSQ=0.9793;ERATE=0.0030;THETA=0.0003;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 169506446 . GT G 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5202;ERATE=0.0007;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169506640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0003;THETA=0.0036;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169506691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6493;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169507010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0745;AVGPOST=0.9981;RSQ=0.9901;ERATE=0.0003;THETA=0.0003;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 169507076 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2494;AVGPOST=0.9968;RSQ=0.9929;ERATE=0.0011;THETA=0.0004;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 169507174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169507357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169507372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169507482 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8315;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169507580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5760;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169507632 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0075;AVGPOST=0.9987;RSQ=0.9328;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169507667 . C CA 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169507726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6619;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169507821 . AAAC A 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169507824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169507833 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6257;ERATE=0.0014;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169507844 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2964;AVGPOST=0.9971;RSQ=0.9945;ERATE=0.0010;THETA=0.0003;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 169507904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9112;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169507982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0481;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0002;THETA=0.0002;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 169508182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6221;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169508204 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169508218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8390;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169508413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169508437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169508449 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169508566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169508574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169508576 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5232;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0004;THETA=0.0002;AC=1144;AN=2184 GT:DS:GL:BD 0.52380955 1
1 169508614 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169508627 . TG T 732 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9985;RSQ=0.9162;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169508629 . GT G 40 PASS INDEL;BAVGPOST=0.972;BRSQ=0.126;LDAF=0.0838;AVGPOST=0.8965;RSQ=0.4612;ERATE=0.0031;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 169508705 rs5778619 AGTT A 43204 PASS INDEL;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2234;AVGPOST=0.9962;RSQ=0.9915;ERATE=0.0006;THETA=0.0004;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 169508732 . A AC 218 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8693;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169508736 . TTAAA T 168 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7612;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169508739 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2459;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 169508745 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7831;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169508753 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6674;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169508775 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8516;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169508927 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169508940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9644;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169509144 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7324;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169509163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5276;AVGPOST=0.9977;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=1153;AN=2184 GT:DS:GL:BD 0.52793038 1
1 169509440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169509483 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0480;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 169509510 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169509652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169509687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169509691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169509698 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169509739 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169509760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169509765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169509781 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169509832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169509923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169509931 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9328;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169510019 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169510022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169510024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169510038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169510118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0814;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 169510139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1897;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0013;THETA=0.0002;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 169510202 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169510206 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169510233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.2589;AVGPOST=0.9866;RSQ=0.9823;ERATE=0.0290;THETA=0.0002;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 169510264 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169510314 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169510348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0481;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0002;THETA=0.0003;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 169510360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169510380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2436;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0005;THETA=0.0003;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 169510475 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1475;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 169510477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0013;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169510483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169510524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.969;LDAF=0.2377;AVGPOST=0.9846;RSQ=0.9704;ERATE=0.0356;THETA=0.0003;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 169510571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169510592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169510660 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169510706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169510728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169510774 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169510784 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169510792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169510824 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169510890 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 169510964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169511017 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169511071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169511073 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169511117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9271;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169511166 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169511208 . ATG A 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5940;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169511281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169511330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169511389 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169511390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169511403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0104;AVGPOST=0.9998;RSQ=0.9901;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169511422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9205;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169511429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169511555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2436;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0005;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 169511576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169511585 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169511593 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169511660 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169511734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2436;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 169511755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2436;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 169511878 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0480;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 169511903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0197;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0002;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169511989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169512027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2436;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 169512039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0480;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 169512078 . CTCT C 538 PASS INDEL;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8261;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169512093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2436;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 169512106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169512120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2436;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 169512186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169512199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169512209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169512223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169512258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169512296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169512313 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8031;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169512319 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169512376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169512497 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2436;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0003;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 169512524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5256;AVGPOST=0.9991;RSQ=0.9991;ERATE=0.0002;THETA=0.0002;AC=1148;AN=2184 GT:DS:GL:BD 0.52564102 1
1 169512562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2435;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0002;THETA=0.0002;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 169512594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2420;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 169512643 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5513;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 169512651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2439;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 169512668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9989;RSQ=0.9214;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169512680 rs35052366 AG A 6226 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0494;AVGPOST=0.9962;RSQ=0.9715;ERATE=0.0005;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 169512682 . GT G 73 PASS INDEL;BAVGPOST=0.970;BRSQ=0.692;LDAF=0.0559;AVGPOST=0.9668;RSQ=0.7794;ERATE=0.0021;THETA=0.0002;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 169512760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8233;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169512839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0490;AVGPOST=0.9984;RSQ=0.9888;ERATE=0.0003;THETA=0.0002;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 169512867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8286;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169512886 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169512913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2438;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0007;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 169512925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169512934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7718;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169512980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2917;AVGPOST=0.9972;RSQ=0.9951;ERATE=0.0005;THETA=0.0055;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 169513130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169513253 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169513366 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169513436 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2407;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0012;THETA=0.0004;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 169513569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169513583 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0526;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0002;THETA=0.0043;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 169513724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169513768 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169513787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169513940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0112;AVGPOST=0.9986;RSQ=0.9466;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169514006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9381;AVGPOST=0.9983;RSQ=0.9884;ERATE=0.0005;THETA=0.0003;AC=2050;AN=2184 GT:DS:GL:BD 0.93864471 1
1 169514023 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9328;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169514125 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5565;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169514274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8812;ERATE=0.0002;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169514303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169514337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2893;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 169514355 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2351;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 169514472 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6736;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169514508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0101;AVGPOST=0.9989;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169514548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.943;LDAF=0.1814;AVGPOST=0.9768;RSQ=0.9549;ERATE=0.0009;THETA=0.0003;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 169514779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2345;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 169514790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.967;LDAF=0.0894;AVGPOST=0.9932;RSQ=0.9670;ERATE=0.0003;THETA=0.0002;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 169514930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2337;AVGPOST=0.9982;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 169515013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0069;AVGPOST=0.9994;RSQ=0.9647;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169515050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8861;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169515148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7406;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169515183 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2346;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0002;THETA=0.0002;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 169515185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169515196 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9575;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169515204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2344;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0002;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 169515296 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2345;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 169515307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2344;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0003;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 169515358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169515381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5308;AVGPOST=0.9994;RSQ=0.9994;ERATE=0.0002;THETA=0.0007;AC=1160;AN=2184 GT:DS:GL:BD 0.53113556 1
1 169515519 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169515529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169515536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2345;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0002;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 169515584 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169515726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0544;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 169515839 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169515873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169515874 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2367;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 169515914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169515916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2126;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 169515925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0791;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0002;THETA=0.0001;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 169515936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2367;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0002;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 169516095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8394;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169516139 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2379;AVGPOST=0.9977;RSQ=0.9950;ERATE=0.0005;THETA=0.0001;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 169516268 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2238;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0005;THETA=0.0003;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 169516359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9226;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169516373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2377;AVGPOST=0.9967;RSQ=0.9934;ERATE=0.0006;THETA=0.0003;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 169516390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0545;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 169516444 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169516452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8092;ERATE=0.0005;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169516507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2660;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 169516605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169516629 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169516700 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2362;AVGPOST=0.9985;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 169516761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8880;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169516766 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0050;AVGPOST=0.9985;RSQ=0.8918;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169516882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8951;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169516991 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169517076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169517143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6427;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169517159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2646;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0004;THETA=0.0005;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 169517224 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9255;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169517321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8544;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169517355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8002;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169517385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2644;AVGPOST=0.9970;RSQ=0.9957;ERATE=0.0005;THETA=0.0002;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 169517494 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169517537 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6327;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169517593 . T TA 335 PASS INDEL;BAVGPOST=0.987;BRSQ=0.621;LDAF=0.0287;AVGPOST=0.9691;RSQ=0.5717;ERATE=0.0106;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 169517632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.841;LDAF=0.0050;AVGPOST=0.9977;RSQ=0.8056;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169517634 . AT A 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169517734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169517767 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169517771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6657;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169517775 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.9052;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169517828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0191;AVGPOST=0.9981;RSQ=0.9635;ERATE=0.0002;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 169517833 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2369;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 169517885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169517904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.2474;AVGPOST=0.9931;RSQ=0.9882;ERATE=0.0007;THETA=0.0003;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 169517910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0544;AVGPOST=0.9979;RSQ=0.9825;ERATE=0.0004;THETA=0.0005;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 169517931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0547;AVGPOST=0.9979;RSQ=0.9828;ERATE=0.0003;THETA=0.0035;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 169517975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2402;AVGPOST=0.9956;RSQ=0.9900;ERATE=0.0010;THETA=0.0004;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 169517980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0201;AVGPOST=0.9979;RSQ=0.9618;ERATE=0.0004;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 169518322 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0543;AVGPOST=0.9993;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 169518462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8779;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169518703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2638;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0004;THETA=0.0004;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 169518775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2280;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0004;THETA=0.0011;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 169518804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.9248;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169518819 rs72248387 TCA T 25719 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2380;AVGPOST=0.9963;RSQ=0.9917;ERATE=0.0008;THETA=0.0006;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 169518855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9614;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169519049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9941;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0002;THETA=0.0005;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 169519112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2637;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 169519276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169519304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0142;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0002;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169519417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4790;AVGPOST=0.9932;RSQ=0.9896;ERATE=0.0008;THETA=0.0009;AC=1045;AN=2184 GT:DS:GL:BD 0.47847986 0
1 169519426 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.6638;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169519526 rs34648252 ACCCC A 191 PASS INDEL;BAVGPOST=0.919;BRSQ=0.166;LDAF=0.1336;AVGPOST=0.8005;RSQ=0.3138;ERATE=0.0173;THETA=0.0002;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 169519549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.924;BRSQ=0.809;LDAF=0.2737;AVGPOST=0.8656;RSQ=0.7161;ERATE=0.0258;THETA=0.0003;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 169519671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0717;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0002;THETA=0.0003;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 169519730 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169519743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8279;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169519765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2509;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0003;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 169519847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169519869 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169519883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169519894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0544;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 169519992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169520037 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169520098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5669;AVGPOST=0.9988;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=1239;AN=2184 GT:DS:GL:BD 0.56730771 1
1 169520214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169520238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9582;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169520331 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9845;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169520332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9741;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169520351 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0769;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0002;THETA=0.0004;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 169520364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2394;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0002;THETA=0.0003;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 169520459 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2377;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 169520460 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0712;AVGPOST=0.9991;RSQ=0.9945;ERATE=0.0002;THETA=0.0005;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 169520525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.6946;ERATE=0.0005;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169520549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2378;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0004;THETA=0.0004;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 169520592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2405;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0005;THETA=0.0006;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 169520593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0146;AVGPOST=0.9993;RSQ=0.9802;ERATE=0.0002;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169520630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0080;AVGPOST=0.9919;RSQ=0.6185;ERATE=0.0006;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169520638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.7931;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169520687 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.9040;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169520688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2308;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 169520993 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2920;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0004;THETA=0.0006;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 169521119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8162;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169521171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6863;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169521232 rs9332585 TATA T 208 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9197;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169521266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0081;AVGPOST=0.9984;RSQ=0.9285;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169521267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169521317 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0531;AVGPOST=0.9992;RSQ=0.9936;ERATE=0.0004;THETA=0.0003;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 169521329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169521528 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169521551 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2291;AVGPOST=0.9978;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 169521553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.9653;AVGPOST=0.9980;RSQ=0.9793;ERATE=0.0002;THETA=0.0010;AC=2107;AN=2184 GT:DS:GL:BD 0.96474361 1
1 169521733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0283;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0020;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 169521747 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169521770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169521849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0686;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0014;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 169521853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0526;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0002;THETA=0.0064;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 169521933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169521985 . T TA 25 PASS INDEL;BAVGPOST=0.992;BRSQ=0.530;LDAF=0.0120;AVGPOST=0.9851;RSQ=0.5083;ERATE=0.0028;THETA=0.0093;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169522282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6684;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169522315 . CT C 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0004;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169522483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8688;ERATE=0.0002;THETA=0.0050;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169522489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169522554 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.965;LDAF=0.0617;AVGPOST=0.9946;RSQ=0.9659;ERATE=0.0003;THETA=0.0073;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 169522576 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169522631 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.968;LDAF=0.3327;AVGPOST=0.9730;RSQ=0.9578;ERATE=0.0027;THETA=0.0073;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 169522674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5386;ERATE=0.0004;THETA=0.0264;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169522675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7638;ERATE=0.0004;THETA=0.0167;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169522727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0052;AVGPOST=0.9978;RSQ=0.8239;ERATE=0.0004;THETA=0.0234;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169522734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.3416;ERATE=0.0005;THETA=0.0245;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169522751 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.864;LDAF=0.0380;AVGPOST=0.9811;RSQ=0.8089;ERATE=0.0008;THETA=0.0030;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 169522843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.736;LDAF=0.0109;AVGPOST=0.9941;RSQ=0.7977;ERATE=0.0013;THETA=0.0043;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169522881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.447;LDAF=0.0154;AVGPOST=0.9799;RSQ=0.4567;ERATE=0.0014;THETA=0.0209;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169522901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.4822;ERATE=0.0005;THETA=0.0250;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169522914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.539;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3995;ERATE=0.0006;THETA=0.0067;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169522916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.584;LDAF=0.0048;AVGPOST=0.9948;RSQ=0.5494;ERATE=0.0008;THETA=0.0110;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169522943 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.796;LDAF=0.1978;AVGPOST=0.9065;RSQ=0.7718;ERATE=0.0090;THETA=0.0136;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 169522946 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.676;LDAF=0.0067;AVGPOST=0.9948;RSQ=0.6872;ERATE=0.0004;THETA=0.0257;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169523017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0038;AVGPOST=0.9977;RSQ=0.7511;ERATE=0.0003;THETA=0.0203;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169523037 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.891;LDAF=0.1384;AVGPOST=0.9716;RSQ=0.9115;ERATE=0.0105;THETA=0.0252;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 169523060 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0093;AVGPOST=0.9984;RSQ=0.9294;ERATE=0.0003;THETA=0.0132;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169523154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0122;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169523249 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.862;LDAF=0.5458;AVGPOST=0.9173;RSQ=0.8833;ERATE=0.0180;THETA=0.0177;AC=1187;AN=2184 GT:DS:GL:BD 0.54349816 1
1 169523255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5069;ERATE=0.0005;THETA=0.0320;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169523289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5434;ERATE=0.0005;THETA=0.0277;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169523292 rs35355929 A AT 174 PASS INDEL;BAVGPOST=0.990;BRSQ=0.539;LDAF=0.0149;AVGPOST=0.9842;RSQ=0.5479;ERATE=0.0032;THETA=0.0414;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169523344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.661;LDAF=0.0113;AVGPOST=0.9922;RSQ=0.7277;ERATE=0.0005;THETA=0.0092;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169523346 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.863;LDAF=0.1251;AVGPOST=0.9710;RSQ=0.8883;ERATE=0.0009;THETA=0.0132;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 169523362 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.879;LDAF=0.1583;AVGPOST=0.9651;RSQ=0.8960;ERATE=0.0020;THETA=0.0209;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 169523384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.886;LDAF=0.0204;AVGPOST=0.9959;RSQ=0.9210;ERATE=0.0003;THETA=0.0316;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 169523392 rs10590284 CAA C 11428 PASS INDEL;BAVGPOST=0.965;BRSQ=0.886;LDAF=0.1567;AVGPOST=0.9643;RSQ=0.8958;ERATE=0.0006;THETA=0.0086;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 169523397 rs11462390 T TG 13221 PASS INDEL;BAVGPOST=0.965;BRSQ=0.887;LDAF=0.1588;AVGPOST=0.9660;RSQ=0.9012;ERATE=0.0006;THETA=0.0385;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 169523407 . A AG 14110 PASS INDEL;BAVGPOST=0.955;BRSQ=0.793;LDAF=0.1398;AVGPOST=0.9443;RSQ=0.7889;ERATE=0.0176;THETA=0.0270;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 169523533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8095;ERATE=0.0006;THETA=0.0253;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169523537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.893;LDAF=0.5047;AVGPOST=0.9362;RSQ=0.9097;ERATE=0.0131;THETA=0.0276;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 169523579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.933;LDAF=0.3072;AVGPOST=0.9564;RSQ=0.9384;ERATE=0.0014;THETA=0.0082;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 169523615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0078;AVGPOST=0.9989;RSQ=0.9406;ERATE=0.0003;THETA=0.0178;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169523639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0079;AVGPOST=0.9991;RSQ=0.9510;ERATE=0.0002;THETA=0.0140;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169523702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.865;LDAF=0.0170;AVGPOST=0.9936;RSQ=0.8500;ERATE=0.0004;THETA=0.0077;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169523706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.896;LDAF=0.4002;AVGPOST=0.9386;RSQ=0.9090;ERATE=0.0111;THETA=0.0207;AC=865;AN=2184 GT:DS:GL:BD 0.39606228 0
1 169523733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7374;ERATE=0.0004;THETA=0.0192;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169523734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6849;ERATE=0.0005;THETA=0.0258;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169523824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0081;AVGPOST=0.9972;RSQ=0.8691;ERATE=0.0005;THETA=0.0282;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169523841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0127;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169523910 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.948;LDAF=0.0419;AVGPOST=0.9925;RSQ=0.9293;ERATE=0.0003;THETA=0.0098;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 169523914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.928;LDAF=0.0890;AVGPOST=0.9854;RSQ=0.9336;ERATE=0.0012;THETA=0.0013;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 169523923 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.914;LDAF=0.0302;AVGPOST=0.9948;RSQ=0.9347;ERATE=0.0003;THETA=0.0078;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 169524039 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169524088 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0083;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169524152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0005;THETA=0.0094;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169524255 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0127;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169524322 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0095;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169524399 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0180;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169524479 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169524504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0002;THETA=0.0123;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169524517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169524537 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169524538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9996;RSQ=0.9027;ERATE=0.0002;THETA=0.0090;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169524666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0029;AVGPOST=0.9974;RSQ=0.6386;ERATE=0.0013;THETA=0.0186;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169524737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169524814 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7917;ERATE=0.0004;THETA=0.0059;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169524840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.0504;AVGPOST=0.9959;RSQ=0.9716;ERATE=0.0003;THETA=0.0015;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 169524966 . GT G 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6023;ERATE=0.0003;THETA=0.0078;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169524991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0230;AVGPOST=0.9979;RSQ=0.9584;ERATE=0.0003;THETA=0.0033;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 169525071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0148;AVGPOST=0.9994;RSQ=0.9837;ERATE=0.0002;THETA=0.0098;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169525171 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2095;AVGPOST=0.9944;RSQ=0.9904;ERATE=0.0002;THETA=0.0034;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 169525206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7164;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169525249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2097;AVGPOST=0.9971;RSQ=0.9951;ERATE=0.0003;THETA=0.0008;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 169525312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1612;AVGPOST=0.9952;RSQ=0.9892;ERATE=0.0003;THETA=0.0015;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 169525409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8945;ERATE=0.0003;THETA=0.0029;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169525449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8843;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169525497 . T TCTACAAC 188 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5198;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169525556 . T TTC 27184 PASS INDEL;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.7404;AVGPOST=0.9793;RSQ=0.9660;ERATE=0.0004;THETA=0.0006;AC=1618;AN=2184 GT:DS:GL:BD 0.74084246 1
1 169525557 rs16684 T TCTCTGGC 135628 PASS INDEL;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.7400;AVGPOST=0.9788;RSQ=0.9648;ERATE=0.0004;THETA=0.0012;AC=1618;AN=2184 GT:DS:GL:BD 0.74084246 1
1 169525675 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0061;AVGPOST=0.9977;RSQ=0.8523;ERATE=0.0004;THETA=0.0079;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169525697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169525766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6853;AVGPOST=0.9996;RSQ=0.9995;ERATE=0.0002;THETA=0.0002;AC=1495;AN=2184 GT:DS:GL:BD 0.68452382 1
1 169525808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2716;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0002;THETA=0.0004;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 169525835 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169525976 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169526011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169526020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9999;RSQ=0.9907;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169526260 . G GC 15843 PASS INDEL;BAVGPOST=0.955;BRSQ=0.923;LDAF=0.5820;AVGPOST=0.9445;RSQ=0.9213;ERATE=0.0059;THETA=0.0003;AC=1295;AN=2184 GT:DS:GL:BD 0.59294873 1
1 169526261 rs79900757 C CA 77385 PASS INDEL;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.6400;AVGPOST=0.9878;RSQ=0.9828;ERATE=0.0007;THETA=0.0008;AC=1395;AN=2184 GT:DS:GL:BD 0.63873625 1
1 169526262 . A AC 15745 PASS INDEL;BAVGPOST=0.953;BRSQ=0.923;LDAF=0.5843;AVGPOST=0.9550;RSQ=0.9358;ERATE=0.0018;THETA=0.0005;AC=1289;AN=2184 GT:DS:GL:BD 0.59020144 1
1 169526300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6853;AVGPOST=0.9994;RSQ=0.9993;ERATE=0.0002;THETA=0.0004;AC=1495;AN=2184 GT:DS:GL:BD 0.68452382 1
1 169526356 rs9332576 ATG A 103 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6942;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169526367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6853;AVGPOST=0.9993;RSQ=0.9992;ERATE=0.0002;THETA=0.0006;AC=1495;AN=2184 GT:DS:GL:BD 0.68452382 1
1 169526420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169526425 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6854;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=1496;AN=2184 GT:DS:GL:BD 0.68498170 1
1 169526460 . TTAAC T 149 PASS INDEL;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5605;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169526477 . T TA 703 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7549;ERATE=0.0012;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169526514 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169526559 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7171;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169526601 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6856;AVGPOST=0.9977;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=1496;AN=2184 GT:DS:GL:BD 0.68498170 1
1 169526646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6856;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0002;THETA=0.0003;AC=1496;AN=2184 GT:DS:GL:BD 0.68498170 1
1 169526950 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6857;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0007;THETA=0.0003;AC=1496;AN=2184 GT:DS:GL:BD 0.68498170 1
1 169527022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169527101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.934;LDAF=0.0510;AVGPOST=0.9960;RSQ=0.9693;ERATE=0.0004;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 169527224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169527226 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6857;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0006;THETA=0.0004;AC=1496;AN=2184 GT:DS:GL:BD 0.68498170 1
1 169527468 rs66470737 TA T 32787 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4076;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=890;AN=2184 GT:DS:GL:BD 0.40750915 0
1 169527470 . AG A 4796 PASS INDEL;BAVGPOST=0.960;BRSQ=0.934;LDAF=0.3744;AVGPOST=0.9619;RSQ=0.9487;ERATE=0.0026;THETA=0.0004;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 169527563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5643;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169527600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8068;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169527619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0189;AVGPOST=0.9995;RSQ=0.9894;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 169527620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9546;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169527662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169527856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4498;AVGPOST=0.9984;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 169527945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6836;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0006;AC=1492;AN=2184 GT:DS:GL:BD 0.68315017 1
1 169527982 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8580;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169527988 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8402;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169528000 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5118;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169528034 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169528075 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4495;AVGPOST=0.9994;RSQ=0.9993;ERATE=0.0002;THETA=0.0004;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 169528108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7180;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169528180 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0496;AVGPOST=0.9994;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 169528384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0416;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 169528493 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169528553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169528580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4140;AVGPOST=0.9999;RSQ=0.9999;ERATE=0.0002;THETA=0.0002;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 169528661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169528722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4141;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0003;THETA=0.0004;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 169528755 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169528830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7426;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 169528859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169528875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0068;AVGPOST=0.9995;RSQ=0.9715;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169528986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169529031 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4142;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 169529102 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169529113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8384;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169529136 rs10560418 AGC A 40178 PASS INDEL;BAVGPOST=0.977;BRSQ=0.961;LDAF=0.4323;AVGPOST=0.9709;RSQ=0.9609;ERATE=0.0065;THETA=0.0004;AC=928;AN=2184 GT:DS:GL:BD 0.42490843 0
1 169529141 rs61224283 GTA G 37031 PASS INDEL;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.4137;AVGPOST=0.9961;RSQ=0.9942;ERATE=0.0007;THETA=0.0002;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 169529197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0351;AVGPOST=0.9997;RSQ=0.9963;ERATE=0.0002;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 169529285 . AG A 292 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0034;AVGPOST=0.9963;RSQ=0.5667;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169529370 . C CGT 174 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169529423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169529455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5491;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169529472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0254;AVGPOST=0.9969;RSQ=0.9495;ERATE=0.0004;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 169529610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9208;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169529646 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0093;AVGPOST=0.9984;RSQ=0.9428;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169529755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0352;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 169529781 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169529814 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0352;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 169529826 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4140;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0002;THETA=0.0003;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 169529854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169529973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4007;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0002;THETA=0.0004;AC=875;AN=2184 GT:DS:GL:BD 0.40064102 0
1 169529974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169530021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169530036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169530070 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4194;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0002;THETA=0.0007;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 169530077 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1073;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0002;THETA=0.0004;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 169530093 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4194;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0002;THETA=0.0002;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 169530176 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4139;AVGPOST=0.9997;RSQ=0.9996;ERATE=0.0002;THETA=0.0006;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 169530308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0418;AVGPOST=0.9996;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 169530361 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2342;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0002;THETA=0.0004;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 169530520 . A AT 987 PASS INDEL;BAVGPOST=0.936;BRSQ=0.834;LDAF=0.2416;AVGPOST=0.9271;RSQ=0.8474;ERATE=0.0135;THETA=0.0003;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 169530563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169530576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8143;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169530586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4494;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0004;THETA=0.0004;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 169530766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9777;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169530837 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2694;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169530981 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2331;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 169531035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.2325;AVGPOST=0.9971;RSQ=0.9942;ERATE=0.0005;THETA=0.0004;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 169531081 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.9012;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169531085 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2342;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 169531135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2354;AVGPOST=0.9974;RSQ=0.9951;ERATE=0.0006;THETA=0.0002;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 169531316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169531442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7496;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0005;THETA=0.0002;AC=1638;AN=2184 GT:DS:GL:BD 0.75000000 1
1 169531498 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169531571 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4141;AVGPOST=0.9991;RSQ=0.9986;ERATE=0.0004;THETA=0.0011;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 169531649 rs34414085 CT C 20881 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2357;AVGPOST=0.9968;RSQ=0.9935;ERATE=0.0005;THETA=0.0003;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 169531700 . CT C 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0012;AVGPOST=0.9982;RSQ=0.4089;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169531789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169531989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169531990 . CT C 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169532111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2361;AVGPOST=0.9958;RSQ=0.9914;ERATE=0.0006;THETA=0.0003;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 169532159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2697;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169532288 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169532338 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0073;AVGPOST=0.9984;RSQ=0.9084;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169532425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7563;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169532504 . TG T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6982;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169532627 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9416;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169532633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2710;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0002;THETA=0.0004;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 169532683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0418;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0002;THETA=0.0003;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 169532867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2711;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0004;THETA=0.0002;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 169532895 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2353;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 169533012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0352;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0002;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 169533093 rs75422509 CTCTT C 41093 PASS INDEL;BAVGPOST=0.988;BRSQ=0.970;LDAF=0.2666;AVGPOST=0.9848;RSQ=0.9700;ERATE=0.0044;THETA=0.0005;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 169533187 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9753;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169533224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2697;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169533266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6827;AVGPOST=0.9981;RSQ=0.9971;ERATE=0.0003;THETA=0.0007;AC=1491;AN=2184 GT:DS:GL:BD 0.68269229 1
1 169533310 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169533346 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2698;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169533402 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2697;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0004;THETA=0.0004;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169533407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8838;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169533452 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8873;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169533524 . TC T 126 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.5665;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169533710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0352;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0002;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 169533744 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4003;AVGPOST=0.9995;RSQ=0.9993;ERATE=0.0003;THETA=0.0002;AC=874;AN=2184 GT:DS:GL:BD 0.40018314 0
1 169533775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169533845 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2700;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0004;THETA=0.0002;AC=589;AN=2184 GT:DS:GL:BD 0.26968864 0
1 169533877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0064;AVGPOST=0.9973;RSQ=0.8647;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169533898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169533985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169533997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4818;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169534028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.4006;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=874;AN=2184 GT:DS:GL:BD 0.40018314 0
1 169534054 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8820;ERATE=0.0005;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169534149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2343;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 169534167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169534223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169534333 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169534338 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9159;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169534369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9302;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169534428 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169534478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169534514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2695;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169534534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169534584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0416;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0002;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 169534631 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6077;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169534671 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0516;AVGPOST=0.9974;RSQ=0.9839;ERATE=0.0002;THETA=0.0003;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 169534739 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0353;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 169534753 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8539;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169534786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6340;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169534818 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169534819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0287;AVGPOST=0.9991;RSQ=0.9902;ERATE=0.0002;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 169534845 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169534888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2696;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169534966 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.864;BRSQ=0.831;LDAF=0.5893;AVGPOST=0.9076;RSQ=0.9001;ERATE=0.0037;THETA=0.0003;AC=1290;AN=2184 GT:DS:GL:BD 0.59065932 1
1 169535038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.900;LDAF=0.0313;AVGPOST=0.9897;RSQ=0.8939;ERATE=0.0002;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 169535057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0293;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169535068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.8016;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169535118 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169535196 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2711;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 169535224 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0352;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 169535272 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0031;AVGPOST=0.9977;RSQ=0.6921;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169535353 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6831;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=1491;AN=2184 GT:DS:GL:BD 0.68269229 1
1 169535374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169535428 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169535429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169535443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8876;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169535520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169535575 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2345;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 169535633 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2703;AVGPOST=0.9977;RSQ=0.9954;ERATE=0.0007;THETA=0.0003;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 169535633 . A AT 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6444;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169535752 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2695;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169535769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2695;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169535825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0354;AVGPOST=0.9995;RSQ=0.9939;ERATE=0.0002;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 169535838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0129;AVGPOST=0.9996;RSQ=0.9864;ERATE=0.0004;THETA=0.0001;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169535850 rs34859178 GA G 25513 PASS INDEL;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2702;AVGPOST=0.9977;RSQ=0.9958;ERATE=0.0005;THETA=0.0006;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 169535918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2108;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 169535974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5223;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169536012 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2346;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 169536065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.893;LDAF=0.0118;AVGPOST=0.9989;RSQ=0.9568;ERATE=0.0002;THETA=0.0001;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169536103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169536167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4000;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 169536182 . CAT C 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5148;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169536240 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2699;AVGPOST=0.9982;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169536252 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9380;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169536338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2695;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0004;THETA=0.0002;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169536429 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8151;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169536439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2336;AVGPOST=0.9979;RSQ=0.9955;ERATE=0.0005;THETA=0.0004;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 169536485 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.976;LDAF=0.2667;AVGPOST=0.9952;RSQ=0.9901;ERATE=0.0004;THETA=0.0005;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 169536502 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.976;LDAF=0.2303;AVGPOST=0.9949;RSQ=0.9888;ERATE=0.0004;THETA=0.0003;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 169536540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7242;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169536630 . A AAAAG 2148 PASS INDEL;BAVGPOST=0.988;BRSQ=0.773;LDAF=0.0266;AVGPOST=0.9915;RSQ=0.8693;ERATE=0.0010;THETA=0.0002;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 169536650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6830;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0008;THETA=0.0002;AC=1491;AN=2184 GT:DS:GL:BD 0.68269229 1
1 169536763 . C CT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4048;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169536901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2346;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 169536914 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169537010 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2346;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0005;THETA=0.0002;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 169537036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0093;AVGPOST=0.9993;RSQ=0.9725;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169537199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6511;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169537261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0080;AVGPOST=0.9987;RSQ=0.9412;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169537302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9297;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169537324 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169537343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0357;AVGPOST=0.9990;RSQ=0.9876;ERATE=0.0002;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 169537413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0009;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169537448 . TTAAA T 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5059;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169537549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4611;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169537580 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9760;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169537678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7417;AVGPOST=0.9971;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=1620;AN=2184 GT:DS:GL:BD 0.74175823 1
1 169537714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.871;LDAF=0.0104;AVGPOST=0.9961;RSQ=0.8519;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169537759 . A AT 139 PASS INDEL;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0013;AVGPOST=0.9979;RSQ=0.4518;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169537766 rs34557523 CT C 25809 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2698;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169537819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.7055;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169537932 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169537939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0054;AVGPOST=0.9989;RSQ=0.9184;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169537963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7130;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169538174 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9054;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169538233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169538247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2789;AVGPOST=0.9979;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=607;AN=2184 GT:DS:GL:BD 0.27793041 0
1 169538345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.915;LDAF=0.0808;AVGPOST=0.9842;RSQ=0.9230;ERATE=0.0006;THETA=0.0003;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 169538384 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169538397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.508;LDAF=0.0015;AVGPOST=0.9977;RSQ=0.3511;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169538426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0095;AVGPOST=0.9990;RSQ=0.9609;ERATE=0.0003;THETA=0.0001;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169538466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1652;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 169538535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6848;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169538544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4008;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0006;THETA=0.0002;AC=874;AN=2184 GT:DS:GL:BD 0.40018314 0
1 169538596 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.2695;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169538603 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4143;AVGPOST=0.9963;RSQ=0.9948;ERATE=0.0008;THETA=0.0004;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 169538651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5027;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169538719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169538838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.9025;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169538842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2696;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169538865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7072;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169538963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7059;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169539000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6394;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169539129 . T TC 43 PASS INDEL;BAVGPOST=0.986;BRSQ=0.541;LDAF=0.0202;AVGPOST=0.9836;RSQ=0.7264;ERATE=0.0004;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169539133 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0416;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0006;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 169539270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8611;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169539283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2698;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169539331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8319;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169539348 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1083;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 169539646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0093;AVGPOST=0.9994;RSQ=0.9731;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169539663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169539711 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0297;AVGPOST=0.9991;RSQ=0.9860;ERATE=0.0002;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169539771 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169539807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9785;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169539923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2696;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169539948 rs9332537 A AT 21799 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2397;AVGPOST=0.9974;RSQ=0.9938;ERATE=0.0007;THETA=0.0003;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 169539973 . A ATT 144 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169540051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8813;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169540080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.2940;AVGPOST=0.9862;RSQ=0.9741;ERATE=0.0006;THETA=0.0003;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 169540136 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169540161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7058;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169540229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9315;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169540276 rs5778622 T TAGG 39799 PASS INDEL;BAVGPOST=0.974;BRSQ=0.945;LDAF=0.2590;AVGPOST=0.9787;RSQ=0.9592;ERATE=0.0020;THETA=0.0001;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 169540277 rs9332535 A AG 6010 PASS INDEL;BAVGPOST=0.977;BRSQ=0.952;LDAF=0.2555;AVGPOST=0.9715;RSQ=0.9443;ERATE=0.0035;THETA=0.0002;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 169540291 rs5778623 TTAAA T 35664 PASS INDEL;BAVGPOST=0.983;BRSQ=0.967;LDAF=0.2620;AVGPOST=0.9847;RSQ=0.9718;ERATE=0.0006;THETA=0.0005;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 169540334 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2403;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 169540422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2403;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0002;THETA=0.0001;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 169540470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7384;ERATE=0.0010;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169540473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7755;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169540543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169540553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0095;AVGPOST=0.9993;RSQ=0.9737;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169540592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2999;AVGPOST=0.9972;RSQ=0.9946;ERATE=0.0008;THETA=0.0004;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 169540728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169540780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6956;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169540812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9091;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169540896 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2693;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169540934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0191;AVGPOST=0.9994;RSQ=0.9864;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 169540971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0061;AVGPOST=0.9985;RSQ=0.8880;ERATE=0.0008;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169540995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9733;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169541100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0002;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169541135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169541161 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6323;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169541165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0172;AVGPOST=0.9995;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 169541198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169541371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169541488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169541513 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1083;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 169541544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169541620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0002;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169541657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169541759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169541782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169541803 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9788;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169541840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0007;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169541850 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9076;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169541924 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169541962 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169542016 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169542019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169542135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2826;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 169542186 . TTTTC T 11951 PASS INDEL;BAVGPOST=0.966;BRSQ=0.920;LDAF=0.2486;AVGPOST=0.9817;RSQ=0.9639;ERATE=0.0008;THETA=0.0003;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 169542187 . TTTC T 20844 PASS INDEL;BAVGPOST=0.960;BRSQ=0.912;LDAF=0.2661;AVGPOST=0.9817;RSQ=0.9680;ERATE=0.0007;THETA=0.0003;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 169542215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7203;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169542262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9989;RSQ=0.9441;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169542346 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7382;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169542433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.512;LDAF=0.0062;AVGPOST=0.9896;RSQ=0.3341;ERATE=0.0018;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169542435 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.4955;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169542471 . CCACCA C 2555 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0144;AVGPOST=0.9991;RSQ=0.9708;ERATE=0.0002;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169542477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7787;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169542482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=1.000;LDAF=0.2403;AVGPOST=0.9984;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 169542606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0002;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169542642 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7625;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169542643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0299;AVGPOST=0.9995;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 169542681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0085;AVGPOST=0.9996;RSQ=0.9807;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169542688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169542697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169542700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0417;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 169542712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169542717 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2405;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0005;THETA=0.0004;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 169542741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169542750 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8907;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169542769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169542799 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0293;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0002;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169542892 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169542949 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9231;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169543022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2404;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 169543023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9927;ERATE=0.0002;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169543032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9752;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169543050 . CAGA C 1083 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0095;AVGPOST=0.9991;RSQ=0.9622;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169543131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.999;LDAF=0.2700;AVGPOST=0.9980;RSQ=0.9958;ERATE=0.0006;THETA=0.0005;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169543185 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169543263 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7450;AVGPOST=0.9967;RSQ=0.9936;ERATE=0.0004;THETA=0.0005;AC=1627;AN=2184 GT:DS:GL:BD 0.74496335 1
1 169543304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169543491 rs71121789 TGGAGTCTC T 13427 PASS INDEL;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0452;AVGPOST=0.9942;RSQ=0.9480;ERATE=0.0003;THETA=0.0005;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 169543672 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169543750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2402;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 169543777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2411;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 169543838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169544043 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2406;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0005;THETA=0.0011;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 169544150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169544234 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2835;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 169544280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7787;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169544293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5556;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169544330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169544387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3402;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 169544444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169544472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2410;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0007;THETA=0.0003;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 169544477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4839;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169544565 . A AG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169544652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169544748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7372;ERATE=0.0002;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169544752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8494;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169544796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169544952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2829;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 169545047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2405;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0002;THETA=0.0004;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 169545065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2404;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0002;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 169545066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9951;ERATE=0.0002;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169545121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8351;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169545123 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9032;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169545128 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2686;AVGPOST=0.9977;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 169545249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9730;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169545278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9166;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169545422 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2996;AVGPOST=0.9983;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 169545452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0292;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0002;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169545539 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8622;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169545554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169545565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0116;AVGPOST=0.9991;RSQ=0.9701;ERATE=0.0002;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169545587 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2405;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 169545666 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169545692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0090;AVGPOST=0.9994;RSQ=0.9673;ERATE=0.0003;THETA=0.0039;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169545771 . A AG 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169545822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2410;AVGPOST=0.9973;RSQ=0.9938;ERATE=0.0007;THETA=0.0002;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 169545835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2406;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0002;THETA=0.0011;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 169545842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169545948 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9828;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169545979 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169546004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7255;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169546220 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7609;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169546248 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8512;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169546253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0287;AVGPOST=0.9990;RSQ=0.9851;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 169546326 . A AG 1773 PASS INDEL;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0242;AVGPOST=0.9969;RSQ=0.9477;ERATE=0.0004;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 169546327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0242;AVGPOST=0.9978;RSQ=0.9663;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 169546328 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0242;AVGPOST=0.9978;RSQ=0.9667;ERATE=0.0002;THETA=0.0010;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 169546497 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9205;ERATE=0.0008;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169546757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.895;LDAF=0.0137;AVGPOST=0.9945;RSQ=0.8340;ERATE=0.0005;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169546785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.980;LDAF=0.0907;AVGPOST=0.9976;RSQ=0.9888;ERATE=0.0005;THETA=0.0004;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 169546817 . ATATATATATATATATATATATATATG A 5856 PASS INDEL;BAVGPOST=0.893;BRSQ=0.532;LDAF=0.1288;AVGPOST=0.8984;RSQ=0.6654;ERATE=0.0060;THETA=0.0003;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 169546833 rs57320132 ATATATATATG A 2226 PASS INDEL;BAVGPOST=0.864;BRSQ=0.562;LDAF=0.2142;AVGPOST=0.8198;RSQ=0.5805;ERATE=0.0115;THETA=0.0004;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 169546835 rs57320132 ATATATATG A 1950 PASS INDEL;BAVGPOST=0.877;BRSQ=0.586;LDAF=0.1979;AVGPOST=0.8363;RSQ=0.6167;ERATE=0.0059;THETA=0.0004;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 169546866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.542;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169546934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0567;AVGPOST=0.9965;RSQ=0.9735;ERATE=0.0005;THETA=0.0003;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 169546986 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.956;LDAF=0.0419;AVGPOST=0.9982;RSQ=0.9810;ERATE=0.0004;THETA=0.0003;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 169547047 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169547116 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169547167 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169547188 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169547267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169547292 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169547333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0065;AVGPOST=0.9987;RSQ=0.9180;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169547344 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7708;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169547369 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0901;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0002;THETA=0.0004;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 169547407 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0841;AVGPOST=0.9992;RSQ=0.9960;ERATE=0.0004;THETA=0.0006;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 169547409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9625;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169547458 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8406;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169547477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0002;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169547585 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7556;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169547610 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0901;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0002;THETA=0.0009;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 169547689 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169547717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0623;AVGPOST=0.9963;RSQ=0.9759;ERATE=0.0005;THETA=0.0002;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 169547757 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0071;AVGPOST=0.9975;RSQ=0.8547;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169547819 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0908;AVGPOST=0.9993;RSQ=0.9970;ERATE=0.0003;THETA=0.0008;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 169547875 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0041;AVGPOST=0.9987;RSQ=0.8822;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169548012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9183;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169548027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7675;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169548053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0491;AVGPOST=0.9994;RSQ=0.9937;ERATE=0.0003;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 169548206 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0417;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0002;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 169548291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0101;AVGPOST=0.9975;RSQ=0.8886;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169548301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0416;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 169548359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169548449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.958;LDAF=0.0355;AVGPOST=0.9994;RSQ=0.9928;ERATE=0.0003;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 169548485 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169548508 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169548580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169548624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169548656 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9760;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169548846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9106;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169548870 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0079;AVGPOST=0.9984;RSQ=0.9254;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169548892 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3327;AVGPOST=0.9977;RSQ=0.9957;ERATE=0.0004;THETA=0.0006;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 169548921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7948;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169549014 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6634;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169549040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0709;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 169549067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0059;AVGPOST=0.9980;RSQ=0.8785;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169549079 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7211;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169549093 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169549152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169549154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169549387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169549532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169549602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169549603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6392;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169549628 . T TG 7150 PASS INDEL;BAVGPOST=0.954;BRSQ=0.894;LDAF=0.2120;AVGPOST=0.9627;RSQ=0.9308;ERATE=0.0010;THETA=0.0008;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 169549629 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.937;LDAF=0.2190;AVGPOST=0.9671;RSQ=0.9424;ERATE=0.0056;THETA=0.0007;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 169549684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9996;RSQ=0.9723;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169549770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.960;LDAF=0.0848;AVGPOST=0.9973;RSQ=0.9887;ERATE=0.0003;THETA=0.0008;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 169549775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7484;AVGPOST=0.9909;RSQ=0.9834;ERATE=0.0018;THETA=0.0002;AC=1639;AN=2184 GT:DS:GL:BD 0.75045788 1
1 169549809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9391;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169549811 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.4030;AVGPOST=0.9894;RSQ=0.9854;ERATE=0.0025;THETA=0.0004;AC=880;AN=2184 GT:DS:GL:BD 0.40293041 0
1 169549848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4548;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169550120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5595;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169550167 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6283;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169550177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0221;AVGPOST=0.9997;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 169550180 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169550336 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0935;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 169550357 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5726;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169550420 rs9332503 G GA 5711 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0428;AVGPOST=0.9980;RSQ=0.9816;ERATE=0.0003;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 169550457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0084;AVGPOST=0.9991;RSQ=0.9640;ERATE=0.0002;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169550474 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6853;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169550491 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4601;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169550538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169550590 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0809;AVGPOST=0.9973;RSQ=0.9867;ERATE=0.0004;THETA=0.0004;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169550591 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0243;AVGPOST=0.9972;RSQ=0.9574;ERATE=0.0002;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 169550747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0443;AVGPOST=0.9995;RSQ=0.9948;ERATE=0.0003;THETA=0.0006;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 169550749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0860;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 169550750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5260;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169550763 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0445;AVGPOST=0.9994;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 169550963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0859;AVGPOST=0.9991;RSQ=0.9950;ERATE=0.0004;THETA=0.0003;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 169551073 rs9332500 TAAAC T 31191 PASS INDEL;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2293;AVGPOST=0.9943;RSQ=0.9879;ERATE=0.0012;THETA=0.0005;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 169551094 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0191;AVGPOST=0.9993;RSQ=0.9845;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 169551110 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169551121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169551307 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9409;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169551390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169551415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5745;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169551434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8693;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169551440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0002;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169551535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0190;AVGPOST=0.9965;RSQ=0.9285;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 169551554 . A AAG 369 PASS INDEL;BAVGPOST=0.970;BRSQ=0.697;LDAF=0.0504;AVGPOST=0.9734;RSQ=0.8013;ERATE=0.0016;THETA=0.0003;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 169551565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0453;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0003;THETA=0.0006;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 169551576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169551646 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169551682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2285;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0002;THETA=0.0004;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 169551792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169551866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169551997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169552013 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169552083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5718;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169552245 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9769;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169552283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0444;AVGPOST=0.9996;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 169552297 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6519;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169552318 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7271;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169552564 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9365;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169552662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9595;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169552765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0113;AVGPOST=0.9990;RSQ=0.9616;ERATE=0.0002;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169552783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0444;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 169553017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9997;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169553110 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0444;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0002;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 169553119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0032;AVGPOST=0.9966;RSQ=0.6328;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169553197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6261;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169553200 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0444;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0009;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 169553281 . T TC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169553301 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.6245;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169553307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8286;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169553389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.817;LDAF=0.0070;AVGPOST=0.9966;RSQ=0.8189;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169553540 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0894;AVGPOST=0.9969;RSQ=0.9862;ERATE=0.0003;THETA=0.0004;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 169553563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0294;AVGPOST=0.9997;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169553566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0445;AVGPOST=0.9993;RSQ=0.9923;ERATE=0.0004;THETA=0.0007;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 169553641 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6771;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169553764 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7722;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169553788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9722;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169553792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9783;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169553806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0294;AVGPOST=0.9996;RSQ=0.9941;ERATE=0.0003;THETA=0.0007;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169553861 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9671;ERATE=0.0002;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169554058 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.7373;AVGPOST=0.9972;RSQ=0.9944;ERATE=0.0005;THETA=0.0003;AC=1609;AN=2184 GT:DS:GL:BD 0.73672163 1
1 169554341 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169554512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169554525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169554620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169554756 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0237;AVGPOST=0.9994;RSQ=0.9875;ERATE=0.0002;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 169554776 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6920;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169554791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169554850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169554930 . CA C 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5195;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169554937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9647;ERATE=0.0003;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169554939 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9250;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169555174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9777;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169555230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0445;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0001;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 169555330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169555454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0002;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169555461 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169555489 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169555513 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169555582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0187;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 169555631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.9093;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169555664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8547;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169555773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169555791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5735;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169555819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0150;AVGPOST=0.9999;RSQ=0.9957;ERATE=0.0002;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 169555973 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0294;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0002;THETA=0.0016;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169556005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7013;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169556006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8713;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169556045 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0296;AVGPOST=0.9993;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169556050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3958;AVGPOST=0.9951;RSQ=0.9934;ERATE=0.0003;THETA=0.0006;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 169556052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7978;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169556063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169556152 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169556250 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0445;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0006;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 169556255 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4636;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169556307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0067;AVGPOST=0.9995;RSQ=0.9611;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169556446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0447;AVGPOST=0.9992;RSQ=0.9917;ERATE=0.0004;THETA=0.0004;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 169556518 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0495;AVGPOST=0.9996;RSQ=0.9961;ERATE=0.0003;THETA=0.0006;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 169556524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0293;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0002;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169556531 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0055;AVGPOST=0.9988;RSQ=0.8983;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169556570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0236;AVGPOST=0.9986;RSQ=0.9738;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 169556756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0856;AVGPOST=0.9991;RSQ=0.9951;ERATE=0.0002;THETA=0.0003;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 169556981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3906;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169557065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169557155 . T TC 776 PASS INDEL;BAVGPOST=0.994;BRSQ=0.896;LDAF=0.0567;AVGPOST=0.9528;RSQ=0.6430;ERATE=0.0018;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 169557159 . C CA 5989 PASS INDEL;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0287;AVGPOST=0.9973;RSQ=0.9662;ERATE=0.0003;THETA=0.0006;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 169557160 . A AC 970 PASS INDEL;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0270;AVGPOST=0.9980;RSQ=0.9729;ERATE=0.0003;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 169557268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169557601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9670;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169557677 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169557734 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0886;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0002;THETA=0.0005;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 169557738 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8742;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169557739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0083;AVGPOST=0.9982;RSQ=0.9212;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169558127 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8613;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169558142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5774;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169558512 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9812;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169558515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169558520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5583;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169558873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0471;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0002;THETA=0.0003;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 169558894 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6569;ERATE=0.0007;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169558951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7873;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169559035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2526;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 169559074 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169559326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0887;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 169559333 rs3917852 AT A 4805 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0422;AVGPOST=0.9986;RSQ=0.9860;ERATE=0.0005;THETA=0.0003;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 169559374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169559396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169559463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169559635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0416;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 169559673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0002;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169559780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9753;ERATE=0.0003;THETA=0.0017;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169559791 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0888;AVGPOST=0.9994;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 169559822 rs67922163 C CATA 34436 PASS INDEL;BAVGPOST=0.975;BRSQ=0.949;LDAF=0.7301;AVGPOST=0.9487;RSQ=0.9143;ERATE=0.0169;THETA=0.0008;AC=1616;AN=2184 GT:DS:GL:BD 0.73992676 1
1 169560042 rs3917846 CTAGATTATAAA C 8423 PASS INDEL;BAVGPOST=0.989;BRSQ=0.854;LDAF=0.0416;AVGPOST=0.9987;RSQ=0.9868;ERATE=0.0002;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 169560054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9996;RSQ=0.9694;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169560133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169560212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0300;AVGPOST=0.9990;RSQ=0.9869;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 169560257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2125;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0005;THETA=0.0004;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 169560258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7385;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169560270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8450;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169560394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169560468 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169560470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9998;RSQ=0.9905;ERATE=0.0003;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169560471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0883;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0002;THETA=0.0006;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 169560485 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0412;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0004;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 169560536 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.9026;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169560613 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169560624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0120;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0002;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169560719 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169560784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0002;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169560794 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169560825 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169560896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169560966 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5961;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169560971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7695;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169561046 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169561155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9062;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169561274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0899;AVGPOST=0.9984;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 169561309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169561442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.832;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8936;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169561584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8945;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169561728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9023;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169561778 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8509;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169561838 . T TA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.5159;ERATE=0.0005;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169561842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8195;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169561864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0887;AVGPOST=0.9982;RSQ=0.9917;ERATE=0.0006;THETA=0.0005;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 169562045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6108;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169562166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169562175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0002;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169562260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0178;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0002;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 169562286 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169562298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8825;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169562345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0476;AVGPOST=0.9990;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 169562408 . AT A 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4892;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169562568 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4603;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169562768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169562857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169562872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169562881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169562904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3830;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0006;THETA=0.0022;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 169562949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169563004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9869;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169563006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169563062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0466;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0020;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 169563146 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9630;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169563445 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7646;ERATE=0.0004;THETA=0.0039;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169563457 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0118;AVGPOST=0.9989;RSQ=0.9617;ERATE=0.0004;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169563493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.846;LDAF=0.0107;AVGPOST=0.9948;RSQ=0.8233;ERATE=0.0010;THETA=0.0066;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169563679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9995;RSQ=0.9762;ERATE=0.0002;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169563710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0002;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169563849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0042;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169563951 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0445;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 169564037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169564061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169564075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169564096 . T TG 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169564130 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2495;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 169564167 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2606;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0002;THETA=0.0005;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 169564372 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9995;RSQ=0.9708;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169564385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169564391 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0472;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 169564428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2487;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 169564440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0164;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0002;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 169564487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2019;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 169564534 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169564558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0090;AVGPOST=0.9983;RSQ=0.9252;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169564582 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2021;AVGPOST=0.9982;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 169564607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0043;AVGPOST=0.9976;RSQ=0.7736;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169564612 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0083;AVGPOST=0.9996;RSQ=0.9792;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169564630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9827;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169564745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2002;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 169564754 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0024;AVGPOST=0.9972;RSQ=0.5788;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169564787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169564889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2016;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0003;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 169564918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0471;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0003;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 169564975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169565021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169565146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169565190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169565246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0002;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169565257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169565282 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169565284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169565287 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169565309 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169565342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169565346 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2006;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 169565350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169565372 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=0.9920;ERATE=0.0009;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169565393 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2007;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0002;THETA=0.0004;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 169565520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0471;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0002;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 169565553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169565565 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7725;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=1686;AN=2184 GT:DS:GL:BD 0.77197802 1
1 169565594 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9521;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169565600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8147;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169565603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7561;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169565725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169566040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2016;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0002;THETA=0.0003;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 169566242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169566265 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169566308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2006;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0001;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 169566313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7523;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0003;AC=1642;AN=2184 GT:DS:GL:BD 0.75183153 1
1 169566326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2006;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 169566329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169566373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169566392 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169566609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169566633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8765;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169566662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8361;ERATE=0.0005;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169566686 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2016;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0002;THETA=0.0003;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 169566727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169566761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0133;AVGPOST=0.9996;RSQ=0.9859;ERATE=0.0002;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169566827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2372;AVGPOST=0.9970;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 169567069 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169567084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2486;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 169567088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5107;ERATE=0.0008;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169567090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0041;AVGPOST=0.9987;RSQ=0.8699;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169567120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9996;RSQ=0.9770;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169567123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8525;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169567207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1870;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 169567308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.7021;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169567310 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169567387 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6692;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169567439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2018;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 169567478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0063;AVGPOST=0.9991;RSQ=0.9324;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169567513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0472;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0002;THETA=0.0006;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 169567514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0079;AVGPOST=0.9992;RSQ=0.9604;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169567516 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2528;AVGPOST=0.9969;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 169567545 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0636;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 169567688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169567796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169567832 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2484;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 169567904 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169567914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7206;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169567942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0181;AVGPOST=0.9990;RSQ=0.9792;ERATE=0.0003;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 169568030 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6738;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169568056 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7209;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169568146 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7424;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169568364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169568423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9991;RSQ=0.9530;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169568470 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0089;AVGPOST=0.9984;RSQ=0.9342;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169568646 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0466;AVGPOST=0.9980;RSQ=0.9839;ERATE=0.0003;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 169568698 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6753;AVGPOST=0.9956;RSQ=0.9941;ERATE=0.0005;THETA=0.0004;AC=1473;AN=2184 GT:DS:GL:BD 0.67445058 1
1 169568719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0473;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 169568722 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8703;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169568829 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5527;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169568847 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9167;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169568906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6739;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169568939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8553;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169568958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0470;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0009;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 169568989 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169569082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8831;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169569125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.3580;ERATE=0.0002;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169569152 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.8028;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169569211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8358;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169569246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6853;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169569266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169569285 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0601;AVGPOST=0.9990;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 169569445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7834;AVGPOST=0.9967;RSQ=0.9930;ERATE=0.0003;THETA=0.0006;AC=1709;AN=2184 GT:DS:GL:BD 0.78250915 1
1 169569481 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7514;AVGPOST=0.9977;RSQ=0.9953;ERATE=0.0006;THETA=0.0020;AC=1640;AN=2184 GT:DS:GL:BD 0.75091577 1
1 169569493 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169569593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7395;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0006;AC=1614;AN=2184 GT:DS:GL:BD 0.73901099 1
1 169569624 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9103;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169569678 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0403;AVGPOST=0.9997;RSQ=0.9963;ERATE=0.0003;THETA=0.0049;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 169569733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0149;AVGPOST=0.9995;RSQ=0.9847;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169569758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169569759 . G GC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4698;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169569770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9880;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169569918 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4800;AVGPOST=0.9975;RSQ=0.9973;ERATE=0.0004;THETA=0.0009;AC=1048;AN=2184 GT:DS:GL:BD 0.47985348 0
1 169570046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5611;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169570102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4911;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169570126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169570187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0031;AVGPOST=0.9955;RSQ=0.5213;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169570237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0150;AVGPOST=0.9993;RSQ=0.9826;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169570502 . TG T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169570782 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8405;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169570801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169570848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1855;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0002;THETA=0.0005;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 169570901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169570971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6884;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169571019 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4737;AVGPOST=0.9987;RSQ=0.9988;ERATE=0.0002;THETA=0.0005;AC=1033;AN=2184 GT:DS:GL:BD 0.47298536 0
1 169571049 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169571076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5444;AVGPOST=0.9988;RSQ=0.9985;ERATE=0.0003;THETA=0.0011;AC=1188;AN=2184 GT:DS:GL:BD 0.54395604 1
1 169571091 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9816;ERATE=0.0003;THETA=0.0043;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169571130 . A AC 20966 PASS INDEL;BAVGPOST=0.973;BRSQ=0.959;LDAF=0.5571;AVGPOST=0.9777;RSQ=0.9725;ERATE=0.0024;THETA=0.0004;AC=1229;AN=2184 GT:DS:GL:BD 0.56272894 1
1 169571132 rs3917773 C CA 77865 PASS INDEL;BAVGPOST=0.984;BRSQ=0.976;LDAF=0.5630;AVGPOST=0.9897;RSQ=0.9869;ERATE=0.0004;THETA=0.0003;AC=1234;AN=2184 GT:DS:GL:BD 0.56501830 1
1 169571133 . A AT 21562 PASS INDEL;BAVGPOST=0.973;BRSQ=0.958;LDAF=0.5540;AVGPOST=0.9747;RSQ=0.9678;ERATE=0.0037;THETA=0.0009;AC=1219;AN=2184 GT:DS:GL:BD 0.55815017 1
1 169571231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169571453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169571503 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9304;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169571518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169571623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169571728 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1920;AVGPOST=0.9981;RSQ=0.9962;ERATE=0.0003;THETA=0.0006;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 169571859 . A AT 698 PASS INDEL;BAVGPOST=0.987;BRSQ=0.620;LDAF=0.0317;AVGPOST=0.9718;RSQ=0.6319;ERATE=0.0057;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 169571918 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0063;AVGPOST=0.9982;RSQ=0.8717;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169571975 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7484;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169571996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9352;ERATE=0.0005;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169572171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169572179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169572186 . T TC 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5247;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169572345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169572531 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169572645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5264;AVGPOST=0.9986;RSQ=0.9985;ERATE=0.0002;THETA=0.0007;AC=1149;AN=2184 GT:DS:GL:BD 0.52609891 1
1 169572666 . GAGGTGTAA G 1521 PASS INDEL;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0069;AVGPOST=0.9969;RSQ=0.8206;ERATE=0.0008;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169572706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9560;ERATE=0.0002;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169572942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169572947 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5432;AVGPOST=0.9978;RSQ=0.9971;ERATE=0.0005;THETA=0.0007;AC=1188;AN=2184 GT:DS:GL:BD 0.54395604 1
1 169572949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0064;AVGPOST=0.9993;RSQ=0.9558;ERATE=0.0002;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169573059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0147;AVGPOST=0.9963;RSQ=0.9136;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169573214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169573258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.756;LDAF=0.0047;AVGPOST=0.9958;RSQ=0.6551;ERATE=0.0013;THETA=0.0033;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169573268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0036;AVGPOST=0.9974;RSQ=0.7057;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169573723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.660;LDAF=0.0331;AVGPOST=0.9672;RSQ=0.5834;ERATE=0.0113;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 169573823 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169573886 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9238;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169573896 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6340;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169574030 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8336;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169574166 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.5423;AVGPOST=0.9990;RSQ=0.9986;ERATE=0.0002;THETA=0.0002;AC=1185;AN=2184 GT:DS:GL:BD 0.54258239 1
1 169574205 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0055;AVGPOST=0.9994;RSQ=0.9570;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169574261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9750;ERATE=0.0003;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169574402 . T TCAA 194 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6598;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169574503 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8906;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169574583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8473;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169574590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9744;ERATE=0.0002;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169574686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169574714 . GGT G 15789 PASS INDEL;BAVGPOST=0.817;BRSQ=0.688;LDAF=0.4464;AVGPOST=0.8135;RSQ=0.7071;ERATE=0.0403;THETA=0.0004;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 169574769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169574851 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6384;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169574887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4714;AVGPOST=0.9968;RSQ=0.9966;ERATE=0.0005;THETA=0.0005;AC=1031;AN=2184 GT:DS:GL:BD 0.47206959 0
1 169575057 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.994;LDAF=0.4714;AVGPOST=0.9942;RSQ=0.9936;ERATE=0.0008;THETA=0.0008;AC=1028;AN=2184 GT:DS:GL:BD 0.47069597 0
1 169575078 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169575168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169575220 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8941;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169575277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0138;AVGPOST=0.9968;RSQ=0.9164;ERATE=0.0003;THETA=0.0011;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169575304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9777;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169575390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6537;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169575462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0153;AVGPOST=0.9984;RSQ=0.9543;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 169575508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6714;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169575533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0103;AVGPOST=0.9988;RSQ=0.9585;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 169575604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9598;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169575651 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0211;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0002;THETA=0.0017;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 169575762 MERGED_DEL_2_6246 CCCATTTTACCATTATACCCTGTGGTTCCTAGAAGTGCCAGACCAGCCTTGGGACAACCACTCTGAAGCAATTTTTTTCCCACCTGGTCTTCTTTCCAGATGCCATGTTTGGCCAGGTGAGAAGAGTTTACCTGGTTTGTGGCAGGAGCCTTCAGGTCTGGGTAAAGACCCTGATAAGGAGTTAGCAAGG C . . SV;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0026;CIEND=-17,33;CIPOS=-18,19;END=169581806;HOMLEN=2;HOMSEQ=CC;SOURCE=GenomeStrip_169575712_169581737 GT:DS:GL:BD 0.00045788 0
1 169575773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169576007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 169576059 . T TGA 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5736;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169576103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169576106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169576130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169576333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169576340 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0012;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169576372 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169576375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169576568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4991;AVGPOST=0.9979;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=1090;AN=2184 GT:DS:GL:BD 0.49908423 0
1 169576667 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.727;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7326;ERATE=0.0004;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169576753 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4719;AVGPOST=0.9960;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=1033;AN=2184 GT:DS:GL:BD 0.47298536 0
1 169576870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7754;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169576888 . C CA 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4209;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169576915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169576989 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0091;AVGPOST=0.9988;RSQ=0.9416;ERATE=0.0003;THETA=0.0036;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169577159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7310;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169577176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9631;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169577307 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9907;ERATE=0.0002;THETA=0.0037;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169577313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169577333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5861;AVGPOST=0.9936;RSQ=0.9915;ERATE=0.0004;THETA=0.0046;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 169577471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0038;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169577518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8419;ERATE=0.0007;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169577633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169577708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8791;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169577990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.975;LDAF=0.8174;AVGPOST=0.9874;RSQ=0.9705;ERATE=0.0007;THETA=0.0102;AC=1787;AN=2184 GT:DS:GL:BD 0.81822342 1
1 169578082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6703;ERATE=0.0002;THETA=0.0184;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169578249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.913;LDAF=0.0114;AVGPOST=0.9990;RSQ=0.9651;ERATE=0.0002;THETA=0.0046;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169578281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9823;ERATE=0.0002;THETA=0.0177;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169578358 . TA T 5338 PASS INDEL;BAVGPOST=0.997;BRSQ=0.950;LDAF=0.0258;AVGPOST=0.9960;RSQ=0.9401;ERATE=0.0006;THETA=0.0096;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 169578415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0215;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169578434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8359;ERATE=0.0005;THETA=0.0171;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169578586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2518;AVGPOST=0.9956;RSQ=0.9921;ERATE=0.0011;THETA=0.0419;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 169578670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0100;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169578799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0316;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169578810 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0320;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169578859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0301;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169578860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9904;ERATE=0.0002;THETA=0.0147;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169578863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0237;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169578893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0278;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169578921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0339;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169578971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0165;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169579004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0274;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169579183 rs3917741 AG A 599 PASS INDEL;BAVGPOST=0.997;BRSQ=0.791;LDAF=0.0072;AVGPOST=0.9953;RSQ=0.7303;ERATE=0.0018;THETA=0.0451;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169579186 . GT G 11 PASS INDEL;BAVGPOST=0.970;BRSQ=0.250;LDAF=0.0963;AVGPOST=0.8344;RSQ=0.2124;ERATE=0.0046;THETA=0.0453;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 169579192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0332;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169579228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0004;THETA=0.0396;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169579230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0002;THETA=0.0329;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169579266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.929;LDAF=0.2632;AVGPOST=0.9689;RSQ=0.9441;ERATE=0.0316;THETA=0.0210;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 169579378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.907;LDAF=0.6909;AVGPOST=0.9453;RSQ=0.9053;ERATE=0.0255;THETA=0.0207;AC=1518;AN=2184 GT:DS:GL:BD 0.69505495 1
1 169579410 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9275;ERATE=0.0003;THETA=0.0454;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169579535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9544;ERATE=0.0003;THETA=0.0378;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169579548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0154;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169579570 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9597;ERATE=0.0003;THETA=0.0351;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169579645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.956;LDAF=0.3483;AVGPOST=0.9766;RSQ=0.9635;ERATE=0.0014;THETA=0.0216;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 169579654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0002;THETA=0.0086;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169579753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0805;AVGPOST=0.9930;RSQ=0.9645;ERATE=0.0003;THETA=0.0168;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169579795 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0003;THETA=0.0080;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169579822 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.972;LDAF=0.3661;AVGPOST=0.9808;RSQ=0.9725;ERATE=0.0007;THETA=0.0037;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 169579910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0002;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169579972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.710;LDAF=0.0066;AVGPOST=0.9942;RSQ=0.6967;ERATE=0.0004;THETA=0.0034;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169579996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.579;LDAF=0.0194;AVGPOST=0.9778;RSQ=0.5673;ERATE=0.0041;THETA=0.0064;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 169580126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0002;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169580173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.8173;ERATE=0.0003;THETA=0.0120;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169580211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7629;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169580290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4014;AVGPOST=0.9958;RSQ=0.9941;ERATE=0.0003;THETA=0.0010;AC=874;AN=2184 GT:DS:GL:BD 0.40018314 0
1 169580463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1224;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0003;THETA=0.0010;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 169580510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1298;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0007;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 169580649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169580658 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9931;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169580671 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169580717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1308;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0002;THETA=0.0008;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 169580739 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169580809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169580885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2144;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0008;THETA=0.0029;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 169580892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169580933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169580937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169581130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1116;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0003;THETA=0.0017;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 169581172 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169581187 . T TA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5869;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169581228 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169581253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9834;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169581258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2023;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0002;THETA=0.0007;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 169581290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0448;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0002;THETA=0.0005;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 169581364 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0009;THETA=0.0011;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169581595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0201;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0002;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 169581607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169581608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169581626 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169581794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8824;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169581823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8536;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169581883 . ACT A 150 PASS INDEL;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7111;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169581898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169581981 . T TA 411 PASS INDEL;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8859;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169582046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169582079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169582104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169582130 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9830;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169582132 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0061;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 169582185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169582317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0402;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 169582352 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8255;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169582401 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0397;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0011;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 169582629 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0002;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 169582661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169582701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169582712 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9268;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169582727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0124;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0002;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169582752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169582770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169582878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169582902 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169583055 . G GC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169583089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9723;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169583105 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169583165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0006;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169583197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0617;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0002;THETA=0.0016;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 169583310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0403;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0002;THETA=0.0010;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 169583336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7182;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169583429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0403;AVGPOST=0.9996;RSQ=0.9953;ERATE=0.0003;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 169583506 . G GGC 195 PASS INDEL;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169583526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169583527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0057;AVGPOST=0.9993;RSQ=0.9510;ERATE=0.0002;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169583538 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169583542 rs3917713 GACAA G 8095 PASS INDEL;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0375;AVGPOST=0.9982;RSQ=0.9846;ERATE=0.0003;THETA=0.0009;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 169583556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169583778 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169583807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169583876 rs3917866 C CA 2949 PASS INDEL;BAVGPOST=0.996;BRSQ=0.873;LDAF=0.0174;AVGPOST=0.9920;RSQ=0.8292;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169583925 . CTA C 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169583996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3131;AVGPOST=0.9957;RSQ=0.9926;ERATE=0.0003;THETA=0.0007;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 169584159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169584214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0239;AVGPOST=0.9986;RSQ=0.9805;ERATE=0.0003;THETA=0.0021;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 169584391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169584417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169584521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1308;AVGPOST=0.9976;RSQ=0.9927;ERATE=0.0005;THETA=0.0008;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169584545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0831;AVGPOST=0.9993;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 169584912 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.7524;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169584964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0376;AVGPOST=0.9993;RSQ=0.9920;ERATE=0.0007;THETA=0.0008;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 169585145 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0657;AVGPOST=0.9996;RSQ=0.9981;ERATE=0.0002;THETA=0.0002;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 169585231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6537;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169585312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6387;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169585388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169585428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169585438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169585472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0059;AVGPOST=0.9999;RSQ=0.9903;ERATE=0.0002;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169585477 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9221;ERATE=0.0002;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169585550 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0444;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 169585564 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5758;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169585602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169585604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169585856 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0002;THETA=0.0016;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169585860 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169585998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7459;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169586026 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9845;ERATE=0.0002;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169586107 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169586113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169586120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169586130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169586260 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169586281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169586330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0265;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0002;THETA=0.0009;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 169586336 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169586363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169586577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169586579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8401;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169586614 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7890;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169586669 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9897;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169586706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169586716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0160;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0002;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 169586834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0002;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169586865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9888;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169586933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0445;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0002;THETA=0.0026;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 169586946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1339;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 169587023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9258;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169587032 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3897;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=851;AN=2184 GT:DS:GL:BD 0.38965201 0
1 169587195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9367;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169587273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0059;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169587312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169587399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169587509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0833;AVGPOST=0.9994;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 169587568 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169587571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169587605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169587615 . CT C 65 PASS INDEL;BAVGPOST=0.998;BRSQ=0.778;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7683;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169587659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5898;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169587703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169587710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7111;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169587841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169587886 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169587923 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7721;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169587934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169588004 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169588028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169588103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0458;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0003;THETA=0.0009;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 169588117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5164;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=1128;AN=2184 GT:DS:GL:BD 0.51648355 1
1 169588147 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8936;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169588162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169588180 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.7360;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169588221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169588232 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169588354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0457;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 169588501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169588505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169588579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169588689 . A AT 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169588911 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.7174;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169589062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169589160 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5485;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169589164 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169589215 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0383;AVGPOST=0.9979;RSQ=0.9786;ERATE=0.0005;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 169589305 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.736;LDAF=0.0050;AVGPOST=0.9978;RSQ=0.8273;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169589309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0372;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 169589370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0330;AVGPOST=0.9973;RSQ=0.9659;ERATE=0.0007;THETA=0.0002;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 169589385 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0134;AVGPOST=0.9985;RSQ=0.9472;ERATE=0.0005;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169589393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3975;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169589649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8673;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169589750 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9406;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169589752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169589754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169589787 . ATGCATT A 272 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5495;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169590231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0323;AVGPOST=0.9994;RSQ=0.9915;ERATE=0.0003;THETA=0.0002;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 169590298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4717;AVGPOST=0.9960;RSQ=0.9938;ERATE=0.0010;THETA=0.0005;AC=1030;AN=2184 GT:DS:GL:BD 0.47161171 0
1 169590415 . TC T 1771 PASS INDEL;BAVGPOST=0.989;BRSQ=0.869;LDAF=0.0410;AVGPOST=0.9906;RSQ=0.9167;ERATE=0.0044;THETA=0.0014;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 169590469 . TTG T 199 PASS INDEL;BAVGPOST=0.985;BRSQ=0.694;LDAF=0.0340;AVGPOST=0.9702;RSQ=0.6375;ERATE=0.0160;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 169590495 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0036;AVGPOST=0.9998;RSQ=0.9777;ERATE=0.0002;THETA=0.0019;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169590589 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169590635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0832;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 169590704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0322;AVGPOST=0.9984;RSQ=0.9783;ERATE=0.0006;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 169590734 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0048;AVGPOST=0.9989;RSQ=0.9005;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169590794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.958;LDAF=0.7421;AVGPOST=0.9796;RSQ=0.9602;ERATE=0.0013;THETA=0.0004;AC=1624;AN=2184 GT:DS:GL:BD 0.74358976 1
1 169590897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169590911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1246;AVGPOST=0.9990;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 169590933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8902;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169590962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9679;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169590991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169591080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4606;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0004;THETA=0.0024;AC=1005;AN=2184 GT:DS:GL:BD 0.46016484 0
1 169591093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1299;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0005;THETA=0.0002;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 169591164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2152;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0002;THETA=0.0004;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 169591267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169591268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7267;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169591311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0069;AVGPOST=0.9984;RSQ=0.8983;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169591333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0298;AVGPOST=0.9994;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 169591373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5189;AVGPOST=0.9965;RSQ=0.9946;ERATE=0.0006;THETA=0.0004;AC=1131;AN=2184 GT:DS:GL:BD 0.51785713 1
1 169591409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4833;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169591467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0060;AVGPOST=0.9994;RSQ=0.9591;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169591468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4262;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169591548 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2467;AVGPOST=0.9971;RSQ=0.9944;ERATE=0.0005;THETA=0.0003;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 169591558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7164;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169591658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7489;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169591703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1134;AVGPOST=0.9988;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 169591724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0331;AVGPOST=0.9995;RSQ=0.9929;ERATE=0.0003;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 169591813 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5817;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169591829 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9836;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169591853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4643;AVGPOST=0.9959;RSQ=0.9936;ERATE=0.0011;THETA=0.0003;AC=1014;AN=2184 GT:DS:GL:BD 0.46428570 0
1 169591882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9986;RSQ=0.8719;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169591895 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1263;AVGPOST=0.9975;RSQ=0.9914;ERATE=0.0004;THETA=0.0006;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 169592208 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8446;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169592240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169592386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8527;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169592393 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5207;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169592401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169592424 rs72514413 G GC 109316 PASS INDEL;BAVGPOST=1.000;BRSQ=0;LDAF=0.9993;AVGPOST=0.9986;RSQ=0.3741;ERATE=0.0004;THETA=0.0005;AC=2183;AN=2184 GT:DS:GL:BD 0.99954212 1
1 169592511 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0628;AVGPOST=0.9971;RSQ=0.9805;ERATE=0.0003;THETA=0.0004;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169592512 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0833;AVGPOST=0.9993;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 169592566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7509;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169592625 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9266;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169592673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9455;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169592734 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169592774 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0051;AVGPOST=0.9977;RSQ=0.8068;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169592854 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8975;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169592914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9998;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0002;THETA=0.0008;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 169592917 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7596;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169592965 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.3370;ERATE=0.0002;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169592977 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169592981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.4656;AVGPOST=0.9960;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 169592987 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.5200;AVGPOST=0.9965;RSQ=0.9946;ERATE=0.0002;THETA=0.0012;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 169593105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7129;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169593113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0298;AVGPOST=0.9996;RSQ=0.9948;ERATE=0.0002;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169593283 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169593409 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8059;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169593550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169593680 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8876;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169593712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169593734 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7661;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169593736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9654;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169593871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7758;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169593902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4945;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169593945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169593999 . C CA 119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6944;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169594194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7910;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169594227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9325;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169594333 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169594562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.9207;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169594692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7668;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169594758 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169594975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169594997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6828;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169595008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5552;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169595069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169595216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169595221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169595253 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169595349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0002;THETA=0.0024;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169595391 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169595447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0047;AVGPOST=0.9992;RSQ=0.9382;ERATE=0.0002;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169595547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8858;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169595688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.753;LDAF=0.0065;AVGPOST=0.9956;RSQ=0.7267;ERATE=0.0005;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169595865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169595880 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169596018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9387;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169596053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9728;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169596093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9042;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169596151 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169596202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0131;AVGPOST=0.9990;RSQ=0.9681;ERATE=0.0002;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169596238 . TGA T 802 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9264;ERATE=0.0006;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169596313 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.5262;AVGPOST=0.9939;RSQ=0.9911;ERATE=0.0019;THETA=0.0003;AC=1149;AN=2184 GT:DS:GL:BD 0.52609891 1
1 169596446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169596450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169596460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7148;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169596461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169596546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.8157;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169596637 . A AT 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4279;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169596682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8407;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169596782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6277;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169596865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6572;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169596923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0002;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169597092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169597098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9986;RSQ=0.8692;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169597104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169597122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169597238 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.5386;AVGPOST=0.9899;RSQ=0.9855;ERATE=0.0016;THETA=0.0003;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 169597267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0080;AVGPOST=0.9991;RSQ=0.9480;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169597362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0198;AVGPOST=0.9996;RSQ=0.9902;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169597473 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169597510 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169597612 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7741;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169597968 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0130;AVGPOST=0.9979;RSQ=0.9420;ERATE=0.0010;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169598083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9070;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169598141 rs3917660 ATTCC A 6830 PASS INDEL;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0327;AVGPOST=0.9985;RSQ=0.9847;ERATE=0.0003;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 169598287 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9873;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169598304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0106;AVGPOST=0.9975;RSQ=0.9042;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169598319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7496;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169598400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169598530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9852;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169598620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169598697 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.9000;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169598736 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169598742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1123;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0002;THETA=0.0005;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 169598753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5421;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169598790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169598814 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5758;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169598864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169598885 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8480;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169598953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169598964 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8109;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169598995 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2457;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0002;THETA=0.0002;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 169598999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7829;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169599118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9788;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169599183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169599219 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169599254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4828;AVGPOST=0.9996;RSQ=0.9995;ERATE=0.0002;THETA=0.0003;AC=1054;AN=2184 GT:DS:GL:BD 0.48260072 0
1 169599265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0002;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169599327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169599420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169599472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169599499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169599541 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169599637 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0055;AVGPOST=0.9994;RSQ=0.9579;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169599666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9909;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169599769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169599840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5636;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169599951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9523;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169600062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0465;AVGPOST=0.9989;RSQ=0.9902;ERATE=0.0003;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 169600079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8467;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169600093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7954;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169600115 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8342;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169600146 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169600232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2369;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0002;THETA=0.0052;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 169600233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169600493 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8347;ERATE=0.0004;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169600531 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6718;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169600581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7198;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169600587 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169600605 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9349;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169600637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.893;LDAF=0.0136;AVGPOST=0.9951;RSQ=0.8670;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169600758 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.9012;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169600772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5895;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169600776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0003;THETA=0.0021;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169600888 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0279;AVGPOST=0.9982;RSQ=0.9781;ERATE=0.0002;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 169600926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169600964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169601029 . A AC 201 PASS INDEL;BAVGPOST=0.998;BRSQ=0.614;LDAF=0.0049;AVGPOST=0.9943;RSQ=0.5413;ERATE=0.0010;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169601045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0463;AVGPOST=0.9983;RSQ=0.9831;ERATE=0.0005;THETA=0.0003;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 169601067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9123;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169601129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1135;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 169601209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8622;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169601281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2610;AVGPOST=0.9970;RSQ=0.9944;ERATE=0.0006;THETA=0.0004;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 169601284 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0075;AVGPOST=0.9993;RSQ=0.9724;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169601298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169601340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.4686;AVGPOST=0.9942;RSQ=0.9919;ERATE=0.0012;THETA=0.0003;AC=1022;AN=2184 GT:DS:GL:BD 0.46794870 0
1 169601396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.6979;ERATE=0.0004;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169601415 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8719;ERATE=0.0004;THETA=0.0048;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169601435 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5180;AVGPOST=0.9954;RSQ=0.9930;ERATE=0.0010;THETA=0.0004;AC=1128;AN=2184 GT:DS:GL:BD 0.51648355 1
1 169601487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8960;ERATE=0.0003;THETA=0.0031;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169601517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7898;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169601713 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9169;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169601749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169601811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8720;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169601894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0087;AVGPOST=0.9987;RSQ=0.9334;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169601950 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9225;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169601956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2562;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 169602001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0443;AVGPOST=0.9992;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 169602068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0464;AVGPOST=0.9994;RSQ=0.9940;ERATE=0.0003;THETA=0.0002;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 169602096 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6698;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169602109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5251;AVGPOST=0.9976;RSQ=0.9963;ERATE=0.0005;THETA=0.0003;AC=1147;AN=2184 GT:DS:GL:BD 0.52518314 1
1 169602146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0067;AVGPOST=0.9995;RSQ=0.9631;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169602207 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9902;ERATE=0.0002;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169602241 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1439;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 169602383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2556;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 169602465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169602499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8697;ERATE=0.0015;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169602515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169602529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8886;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169602632 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8632;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169602641 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0507;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0002;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 169602653 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9443;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169602662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169602694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169602734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9499;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169602803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0507;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 169602882 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9623;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169602925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.7894;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169603050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9771;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169603185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0456;AVGPOST=0.9986;RSQ=0.9903;ERATE=0.0002;THETA=0.0003;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 169603216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169603252 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169603362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0073;AVGPOST=0.9988;RSQ=0.9295;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169603369 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8648;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169603377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169603448 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0087;AVGPOST=0.9992;RSQ=0.9608;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169603473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5775;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169603539 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169603752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4655;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169603774 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6378;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169603787 . G GC 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7148;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169603860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0038;AVGPOST=0.9976;RSQ=0.7727;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169603865 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169604249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0062;AVGPOST=0.9988;RSQ=0.9160;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169604335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0004;AVGPOST=0.9991;RSQ=0.2915;ERATE=0.0004;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169604358 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169604371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5949;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169604422 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7089;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169604539 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9993;RSQ=0.9561;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169604601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4332;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169604720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169604754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5248;AVGPOST=0.9952;RSQ=0.9932;ERATE=0.0007;THETA=0.0002;AC=1146;AN=2184 GT:DS:GL:BD 0.52472526 1
1 169604757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7391;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169604785 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1152;AVGPOST=0.9943;RSQ=0.9786;ERATE=0.0011;THETA=0.0004;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 169604814 . GT G 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5521;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169605037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169605098 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8357;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169605377 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5084;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169605528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0036;AVGPOST=0.9967;RSQ=0.6880;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169605583 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169605785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0501;AVGPOST=0.9990;RSQ=0.9920;ERATE=0.0005;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 169605832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.540;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5036;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169605885 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9997;RSQ=0.9855;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169605890 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6504;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169606008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5130;AVGPOST=0.9982;RSQ=0.9973;ERATE=0.0006;THETA=0.0003;AC=1120;AN=2184 GT:DS:GL:BD 0.51282054 1
1 169606055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0467;AVGPOST=0.9983;RSQ=0.9857;ERATE=0.0002;THETA=0.0005;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 169606098 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8153;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169606267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.576;LDAF=0.0108;AVGPOST=0.9839;RSQ=0.4218;ERATE=0.0031;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169606273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.974;LDAF=0.5023;AVGPOST=0.9826;RSQ=0.9761;ERATE=0.0025;THETA=0.0004;AC=1100;AN=2184 GT:DS:GL:BD 0.50366300 1
1 169606296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0055;AVGPOST=0.9955;RSQ=0.6582;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169606412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1767;AVGPOST=0.9978;RSQ=0.9934;ERATE=0.0006;THETA=0.0001;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 169606459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9782;ERATE=0.0002;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169606584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0070;AVGPOST=0.9986;RSQ=0.9188;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169606590 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1225;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 169606601 . A ACT 745 PASS INDEL;BAVGPOST=0.963;BRSQ=0.749;LDAF=0.1092;AVGPOST=0.9274;RSQ=0.7040;ERATE=0.0067;THETA=0.0004;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 169606879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3539;ERATE=0.0010;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169606908 . C CA 44 PASS INDEL;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7148;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169606910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0055;AVGPOST=0.9966;RSQ=0.7680;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169606931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0602;AVGPOST=0.9980;RSQ=0.9880;ERATE=0.0004;THETA=0.0003;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 169607049 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.1121;AVGPOST=0.9984;RSQ=0.9932;ERATE=0.0004;THETA=0.0002;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 169607071 . C CA 406 PASS INDEL;BAVGPOST=0.957;BRSQ=0.563;LDAF=0.0870;AVGPOST=0.9039;RSQ=0.4911;ERATE=0.0343;THETA=0.0009;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 169607088 . A AT 95 PASS INDEL;BAVGPOST=0.997;BRSQ=0.769;LDAF=0.0101;AVGPOST=0.9923;RSQ=0.7015;ERATE=0.0032;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169607157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9771;ERATE=0.0003;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169607473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0073;AVGPOST=0.9993;RSQ=0.9621;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169607643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.945;LDAF=0.0295;AVGPOST=0.9901;RSQ=0.8755;ERATE=0.0005;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 169607656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6204;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169607749 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.919;LDAF=0.0295;AVGPOST=0.9941;RSQ=0.9264;ERATE=0.0004;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 169607794 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169607896 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8818;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169607916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169608024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9202;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169608068 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5138;AVGPOST=0.9968;RSQ=0.9954;ERATE=0.0005;THETA=0.0003;AC=1120;AN=2184 GT:DS:GL:BD 0.51282054 1
1 169608078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0503;AVGPOST=0.9988;RSQ=0.9907;ERATE=0.0004;THETA=0.0002;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 169608201 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4649;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169608206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169608306 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5611;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169608430 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.413;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169608442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5884;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169608608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0052;AVGPOST=0.9967;RSQ=0.7545;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169608799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9997;RSQ=0.9855;ERATE=0.0002;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169608874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169608917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2883;AVGPOST=0.9982;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 169608985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169609329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0302;AVGPOST=0.9957;RSQ=0.9448;ERATE=0.0004;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 169609358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0335;AVGPOST=0.9975;RSQ=0.9712;ERATE=0.0005;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 169609380 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0402;AVGPOST=0.9943;RSQ=0.9503;ERATE=0.0005;THETA=0.0010;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 169609530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.553;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5870;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169609680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.858;BRSQ=0.737;LDAF=0.6184;AVGPOST=0.7845;RSQ=0.6553;ERATE=0.0296;THETA=0.0002;AC=1444;AN=2184 GT:DS:GL:BD 0.66117215 1
1 169609745 rs72040040 TGGGGTG T 338 PASS INDEL;BAVGPOST=0.974;BRSQ=0.390;LDAF=0.0267;AVGPOST=0.9845;RSQ=0.7709;ERATE=0.0009;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 169609773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0517;AVGPOST=0.9985;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 169609801 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0078;AVGPOST=0.9972;RSQ=0.8489;ERATE=0.0006;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169609859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.536;LDAF=0.0048;AVGPOST=0.9940;RSQ=0.5337;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169609906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6516;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169610133 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0039;AVGPOST=0.9983;RSQ=0.8239;ERATE=0.0003;THETA=0.0024;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169610166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.6629;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169610169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0051;AVGPOST=0.9994;RSQ=0.9464;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169610286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0108;AVGPOST=0.9962;RSQ=0.8515;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169610399 . ATAT A 410 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169610437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4793;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169610477 rs34709495 ATATAAG A 25341 PASS INDEL;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1450;AVGPOST=0.9979;RSQ=0.9942;ERATE=0.0005;THETA=0.0005;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 169610578 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9581;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169610606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0033;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169610717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169610795 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.733;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7902;ERATE=0.0009;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169610886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1249;AVGPOST=0.9968;RSQ=0.9901;ERATE=0.0007;THETA=0.0006;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 169610907 . C CTA 2288 PASS INDEL;BAVGPOST=0.996;BRSQ=0.956;LDAF=0.0445;AVGPOST=0.9987;RSQ=0.9878;ERATE=0.0004;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 169610951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169610957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169610984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169611101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169611215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169611225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169611472 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.994;LDAF=0.5159;AVGPOST=0.9967;RSQ=0.9946;ERATE=0.0009;THETA=0.0034;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 169611489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0062;AVGPOST=0.9989;RSQ=0.9378;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169611577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169611673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0494;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0002;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 169611907 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169612038 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6318;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169612057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169612059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169612280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9988;RSQ=0.9488;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169612569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9678;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169612872 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169612964 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.5409;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169613033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8958;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169613148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8910;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169613363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0045;AVGPOST=0.9973;RSQ=0.7633;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169613369 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.960;LDAF=0.1119;AVGPOST=0.9985;RSQ=0.9934;ERATE=0.0003;THETA=0.0002;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 169613433 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.890;LDAF=0.0207;AVGPOST=0.9945;RSQ=0.8918;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 169613435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8709;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169613503 . A ACAGCTATT 2488 PASS INDEL;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0072;AVGPOST=0.9976;RSQ=0.8501;ERATE=0.0006;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169613571 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169613701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0069;AVGPOST=0.9982;RSQ=0.8951;ERATE=0.0004;THETA=0.0035;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169613794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2159;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 169613970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169613991 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1070;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 169614000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169614043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0023;AVGPOST=0.9971;RSQ=0.5510;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169614091 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169614107 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0286;AVGPOST=0.9994;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 169614142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0461;AVGPOST=0.9988;RSQ=0.9896;ERATE=0.0004;THETA=0.0002;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 169614346 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0387;AVGPOST=0.9995;RSQ=0.9944;ERATE=0.0002;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 169614362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.805;LDAF=0.0162;AVGPOST=0.9924;RSQ=0.8082;ERATE=0.0008;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 169614476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1126;AVGPOST=0.9985;RSQ=0.9936;ERATE=0.0005;THETA=0.0002;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 169614502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4862;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169614550 . TAAGA T 286 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0053;AVGPOST=0.9979;RSQ=0.8405;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169614571 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.1053;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169614628 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169614907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8757;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169614949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1395;AVGPOST=0.9983;RSQ=0.9943;ERATE=0.0004;THETA=0.0003;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 169614988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169615000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0390;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0002;THETA=0.0002;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 169615011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8411;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169615041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0484;AVGPOST=0.9989;RSQ=0.9910;ERATE=0.0003;THETA=0.0004;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 169615059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169615081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4352;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169615184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0035;AVGPOST=0.9980;RSQ=0.7305;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169615269 . C CA 1903 PASS INDEL;BAVGPOST=0.936;BRSQ=0.610;LDAF=0.1243;AVGPOST=0.8784;RSQ=0.5581;ERATE=0.0440;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 169615394 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169615399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169615428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1518;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 169615478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7287;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169615503 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0335;AVGPOST=0.9993;RSQ=0.9915;ERATE=0.0003;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 169615596 . TTACAGAGAGAA T 8989 PASS INDEL;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0485;AVGPOST=0.9965;RSQ=0.9717;ERATE=0.0007;THETA=0.0005;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 169615599 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5979;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169615682 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9696;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169615755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0050;AVGPOST=0.9972;RSQ=0.7799;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169615767 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1316;AVGPOST=0.9969;RSQ=0.9896;ERATE=0.0004;THETA=0.0005;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 169615782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6947;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169615878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5754;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169615960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.2393;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169615962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6835;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169615981 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9114;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169616020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4982;AVGPOST=0.9963;RSQ=0.9945;ERATE=0.0009;THETA=0.0003;AC=1087;AN=2184 GT:DS:GL:BD 0.49771062 0
1 169616188 . AAC A 101 PASS INDEL;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0067;AVGPOST=0.9973;RSQ=0.8271;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169616280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0027;AVGPOST=0.9966;RSQ=0.4765;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169616386 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.1318;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 169616417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0030;AVGPOST=0.9959;RSQ=0.4808;ERATE=0.0011;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169616477 . TAA T 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169616491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169616514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169616709 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.5048;AVGPOST=0.9981;RSQ=0.9971;ERATE=0.0005;THETA=0.0003;AC=1102;AN=2184 GT:DS:GL:BD 0.50457877 1
1 169616991 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4851;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169617100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1123;AVGPOST=0.9988;RSQ=0.9952;ERATE=0.0004;THETA=0.0005;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 169617133 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5095;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169617235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169617312 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5559;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169617400 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8155;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169617559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9561;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169617561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7448;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169617584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6880;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169617606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7422;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169617754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7271;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169617777 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0073;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169617838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5445;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169617850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5994;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169617890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1125;AVGPOST=0.9984;RSQ=0.9942;ERATE=0.0004;THETA=0.0005;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 169617938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169618129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0333;AVGPOST=0.9995;RSQ=0.9935;ERATE=0.0002;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 169618174 . ACTCACT A 12088 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0785;AVGPOST=0.9980;RSQ=0.9896;ERATE=0.0003;THETA=0.0001;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169618218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169618283 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9683;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169618301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9728;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169618489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169618750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0797;AVGPOST=0.9987;RSQ=0.9934;ERATE=0.0003;THETA=0.0002;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 169618767 . T TG 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6507;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169618789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0335;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0002;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 169618806 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169618816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9731;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169618817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8639;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169618820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5116;AVGPOST=0.9984;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=1117;AN=2184 GT:DS:GL:BD 0.51144689 1
1 169618895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169618980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6695;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169619113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.8245;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169619291 . T TG 7960 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0661;AVGPOST=0.9992;RSQ=0.9949;ERATE=0.0003;THETA=0.0002;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 169619330 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1120;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 169619358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5033;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169619382 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9785;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169619423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8351;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169619457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8597;ERATE=0.0003;THETA=0.0060;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169619591 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1311;AVGPOST=0.9993;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169619676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.7972;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169619762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169619788 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1312;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0005;THETA=0.0002;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169619920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.7153;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169619965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1314;AVGPOST=0.9978;RSQ=0.9926;ERATE=0.0004;THETA=0.0005;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169619975 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8271;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169620061 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8631;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169620126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5898;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169620168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1288;AVGPOST=0.9975;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 169620178 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1288;AVGPOST=0.9974;RSQ=0.9919;ERATE=0.0003;THETA=0.0002;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 169620181 . G GT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7491;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169620206 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1290;AVGPOST=0.9971;RSQ=0.9908;ERATE=0.0002;THETA=0.0006;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 169620362 . G GA 60 PASS INDEL;BAVGPOST=0.998;BRSQ=0.592;LDAF=0.0047;AVGPOST=0.9936;RSQ=0.4720;ERATE=0.0012;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169620381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169620581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169620646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169620671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9994;RSQ=0.9732;ERATE=0.0002;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169620673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3802;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=830;AN=2184 GT:DS:GL:BD 0.38003662 0
1 169620705 . T TG 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7439;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169620706 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9995;RSQ=0.9632;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169620811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8364;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169620854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6447;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169620938 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169620956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9803;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169621017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8031;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169621068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169621403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169621421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169621445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169621568 rs68074646 GT G 7542 PASS INDEL;BAVGPOST=0.986;BRSQ=0.953;LDAF=0.1324;AVGPOST=0.9938;RSQ=0.9803;ERATE=0.0006;THETA=0.0003;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 169621616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9549;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169621669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169621672 . TC T 379 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9459;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169621676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5918;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169621925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8356;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169622061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3887;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0007;THETA=0.0006;AC=848;AN=2184 GT:DS:GL:BD 0.38827839 0
1 169622230 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169622253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169622299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7102;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169622327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1126;AVGPOST=0.9983;RSQ=0.9929;ERATE=0.0005;THETA=0.0002;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 169622338 . G GA 43 PASS INDEL;BAVGPOST=0.987;BRSQ=0.554;LDAF=0.0337;AVGPOST=0.9558;RSQ=0.4498;ERATE=0.0096;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 169622430 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5213;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169622457 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5367;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169622530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7365;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169622556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1126;AVGPOST=0.9984;RSQ=0.9932;ERATE=0.0005;THETA=0.0003;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 169622574 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.7019;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169622678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4435;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169622788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4507;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169622857 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169622927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1312;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0005;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169622940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8258;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169622979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1126;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 169623060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169623083 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0804;AVGPOST=0.9994;RSQ=0.9971;ERATE=0.0002;THETA=0.0007;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 169623104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3914;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0005;THETA=0.0002;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 169623189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1304;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169623200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9784;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169623223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7556;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169623232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169623233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169623413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1304;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169623470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0096;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0002;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169623480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169623594 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1304;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0002;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169623649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8920;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169623680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0794;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 169623688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1302;AVGPOST=0.9992;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169623736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7893;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169623857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169623895 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1926;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0002;THETA=0.0005;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 169624016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0285;AVGPOST=0.9995;RSQ=0.9935;ERATE=0.0002;THETA=0.0002;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 169624019 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1301;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0004;THETA=0.0006;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169624026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5130;AVGPOST=0.9957;RSQ=0.9942;ERATE=0.0010;THETA=0.0003;AC=1118;AN=2184 GT:DS:GL:BD 0.51190478 1
1 169624150 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0794;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0002;THETA=0.0005;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 169624177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3954;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0006;THETA=0.0003;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 169624201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1299;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169624227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169624278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7044;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169624540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7419;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169624564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169624665 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7547;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169624678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6649;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169624764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0445;AVGPOST=0.9979;RSQ=0.9817;ERATE=0.0004;THETA=0.0010;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 169624765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6800;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169624817 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169624851 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0110;AVGPOST=0.9974;RSQ=0.9229;ERATE=0.0005;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169624855 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169624905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8037;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169624957 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169624970 . TTC T 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7031;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169625034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8855;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169625211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8646;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169625268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0484;AVGPOST=0.9989;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 169625269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4480;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169625312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0301;AVGPOST=0.9953;RSQ=0.9431;ERATE=0.0005;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 169625333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5441;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169625415 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1303;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169625487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5826;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169625515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5272;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169625530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169625569 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5209;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169625570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9264;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169625593 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0087;AVGPOST=0.9986;RSQ=0.9278;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169625602 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0482;AVGPOST=0.9994;RSQ=0.9942;ERATE=0.0002;THETA=0.0006;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 169625605 rs34269019 G GT 8641 PASS INDEL;BAVGPOST=0.955;BRSQ=0.846;LDAF=0.1560;AVGPOST=0.9381;RSQ=0.8196;ERATE=0.0175;THETA=0.0002;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 169625655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9108;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169625788 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0032;AVGPOST=0.9975;RSQ=0.6992;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169625807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0536;AVGPOST=0.9977;RSQ=0.9826;ERATE=0.0003;THETA=0.0003;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 169625897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1301;AVGPOST=0.9983;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 169625912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.1918;AVGPOST=0.9974;RSQ=0.9926;ERATE=0.0005;THETA=0.0007;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 169625922 . CA C 552 PASS INDEL;BAVGPOST=0.990;BRSQ=0.928;LDAF=0.0654;AVGPOST=0.9986;RSQ=0.9899;ERATE=0.0005;THETA=0.0006;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 169625925 . AG A 5946 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0663;AVGPOST=0.9992;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 169626062 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169626122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.8173;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169626125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1314;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0003;THETA=0.0009;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169626214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8754;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169626257 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169626410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8928;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169626451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1312;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0002;THETA=0.0005;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169626478 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8241;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169626579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8148;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169626645 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4021;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0004;THETA=0.0007;AC=879;AN=2184 GT:DS:GL:BD 0.40247253 0
1 169626782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1120;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0006;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 169626869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5762;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169626870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169626911 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0684;AVGPOST=0.9939;RSQ=0.9647;ERATE=0.0003;THETA=0.0003;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 169626947 . GA G 11246 PASS INDEL;BAVGPOST=0.976;BRSQ=0.911;LDAF=0.1275;AVGPOST=0.9961;RSQ=0.9856;ERATE=0.0006;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 169626991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169627010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0062;AVGPOST=0.9993;RSQ=0.9531;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169627466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.591;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6959;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169627631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1295;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 169627686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4774;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169627817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169627908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.908;LDAF=0.0126;AVGPOST=0.9976;RSQ=0.9287;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169628148 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9081;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169628164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8335;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169628185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0132;AVGPOST=0.9973;RSQ=0.9337;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169628195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169628243 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169628426 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.677;LDAF=0.0043;AVGPOST=0.9952;RSQ=0.5711;ERATE=0.0013;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169628634 . AT A 19126 PASS INDEL;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1300;AVGPOST=0.9982;RSQ=0.9931;ERATE=0.0004;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169628700 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6918;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169628728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169628815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4975;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=1087;AN=2184 GT:DS:GL:BD 0.49771062 0
1 169628856 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0071;AVGPOST=0.9974;RSQ=0.8600;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169628894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0090;AVGPOST=0.9991;RSQ=0.9582;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169628961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.971;LDAF=0.3911;AVGPOST=0.9941;RSQ=0.9899;ERATE=0.0006;THETA=0.0002;AC=857;AN=2184 GT:DS:GL:BD 0.39239928 0
1 169629004 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1303;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169629030 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9523;ERATE=0.0002;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169629141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0280;AVGPOST=0.9991;RSQ=0.9874;ERATE=0.0002;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 169629159 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.970;LDAF=0.3896;AVGPOST=0.9804;RSQ=0.9691;ERATE=0.0058;THETA=0.0002;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 169629220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4953;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169629221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.947;LDAF=0.1117;AVGPOST=0.9985;RSQ=0.9937;ERATE=0.0005;THETA=0.0004;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 169629261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169629294 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0056;AVGPOST=0.9974;RSQ=0.8232;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169629812 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169629823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7104;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169629852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1306;AVGPOST=0.9984;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169629919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8975;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169629972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6227;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169630030 rs61410891 TATC T 19885 PASS INDEL;BAVGPOST=0.973;BRSQ=0.936;LDAF=0.2608;AVGPOST=0.9888;RSQ=0.9783;ERATE=0.0022;THETA=0.0006;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 169630088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.968;LDAF=0.1154;AVGPOST=0.9964;RSQ=0.9874;ERATE=0.0003;THETA=0.0005;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 169630163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169630248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1129;AVGPOST=0.9986;RSQ=0.9940;ERATE=0.0007;THETA=0.0004;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 169630286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.1350;AVGPOST=0.9965;RSQ=0.9881;ERATE=0.0013;THETA=0.0009;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 169630311 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8219;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169630364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.976;LDAF=0.4935;AVGPOST=0.9954;RSQ=0.9928;ERATE=0.0005;THETA=0.0005;AC=1079;AN=2184 GT:DS:GL:BD 0.49404761 0
1 169630423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0136;AVGPOST=0.9948;RSQ=0.8454;ERATE=0.0009;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 169630475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9598;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169630506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0066;AVGPOST=0.9979;RSQ=0.8533;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169630512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9024;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169630513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.640;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7429;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169630544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9143;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169630549 . CG C 136 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9976;RSQ=0.8152;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169630550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0521;AVGPOST=0.9982;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 169630554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9979;RSQ=0.8683;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169630557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.941;LDAF=0.1356;AVGPOST=0.9845;RSQ=0.9525;ERATE=0.0014;THETA=0.0002;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 169630567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0091;AVGPOST=0.9927;RSQ=0.6851;ERATE=0.0010;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169630625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.3995;AVGPOST=0.9792;RSQ=0.9675;ERATE=0.0021;THETA=0.0002;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 169630756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.713;LDAF=0.0072;AVGPOST=0.9932;RSQ=0.5992;ERATE=0.0009;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169630757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.7935;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169630762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0471;AVGPOST=0.9975;RSQ=0.9823;ERATE=0.0003;THETA=0.0005;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 169630891 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.631;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6636;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169630932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.4941;AVGPOST=0.9943;RSQ=0.9917;ERATE=0.0008;THETA=0.0014;AC=1078;AN=2184 GT:DS:GL:BD 0.49358973 0
1 169631043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169631117 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8914;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169631201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1139;AVGPOST=0.9955;RSQ=0.9840;ERATE=0.0006;THETA=0.0006;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 169631249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169631253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0466;AVGPOST=0.9975;RSQ=0.9811;ERATE=0.0005;THETA=0.0002;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 169631254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5515;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169631373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2647;AVGPOST=0.9980;RSQ=0.9955;ERATE=0.0004;THETA=0.0002;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 169631405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169631449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.965;LDAF=0.1263;AVGPOST=0.9966;RSQ=0.9879;ERATE=0.0003;THETA=0.0002;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 169631452 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.971;LDAF=0.1856;AVGPOST=0.9891;RSQ=0.9736;ERATE=0.0027;THETA=0.0002;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 169631463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.953;LDAF=0.1263;AVGPOST=0.9941;RSQ=0.9801;ERATE=0.0003;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 169631466 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4200;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169631608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9197;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169631643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.962;LDAF=0.3991;AVGPOST=0.9906;RSQ=0.9855;ERATE=0.0006;THETA=0.0006;AC=878;AN=2184 GT:DS:GL:BD 0.40201464 0
1 169631690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.769;LDAF=0.0068;AVGPOST=0.9968;RSQ=0.8208;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169631716 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0090;AVGPOST=0.9986;RSQ=0.9339;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169631737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1304;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169631762 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7610;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169631791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169631825 . TA T 153 PASS INDEL;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4911;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169631886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.6629;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169631923 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0480;AVGPOST=0.9994;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 169631999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0032;AVGPOST=0.9958;RSQ=0.4521;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169632000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0045;AVGPOST=0.9973;RSQ=0.7405;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169632007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0066;AVGPOST=0.9969;RSQ=0.8350;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169632032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5607;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169632033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.913;LDAF=0.0136;AVGPOST=0.9986;RSQ=0.9572;ERATE=0.0002;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169632046 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9762;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169632110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169632132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0040;AVGPOST=0.9996;RSQ=0.9628;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169632177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1300;AVGPOST=0.9984;RSQ=0.9938;ERATE=0.0003;THETA=0.0004;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169632227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0047;AVGPOST=0.9976;RSQ=0.7549;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169632268 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0024;AVGPOST=0.9961;RSQ=0.3686;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169632269 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.947;LDAF=0.4724;AVGPOST=0.9403;RSQ=0.9225;ERATE=0.0086;THETA=0.0004;AC=1054;AN=2184 GT:DS:GL:BD 0.48260072 0
1 169632306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.924;LDAF=0.1268;AVGPOST=0.9926;RSQ=0.9756;ERATE=0.0003;THETA=0.0003;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 169632313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3341;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169632340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6521;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169632375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2641;AVGPOST=0.9978;RSQ=0.9951;ERATE=0.0005;THETA=0.0003;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 169632625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5897;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169632665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7478;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169632701 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1926;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0002;THETA=0.0003;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 169632702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3601;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169632737 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8504;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169632743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0478;AVGPOST=0.9995;RSQ=0.9947;ERATE=0.0002;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 169632809 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.949;LDAF=0.2590;AVGPOST=0.9919;RSQ=0.9839;ERATE=0.0004;THETA=0.0002;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 169632810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.953;LDAF=0.3884;AVGPOST=0.9870;RSQ=0.9789;ERATE=0.0012;THETA=0.0003;AC=851;AN=2184 GT:DS:GL:BD 0.38965201 0
1 169632820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.524;LDAF=0.0103;AVGPOST=0.9872;RSQ=0.5097;ERATE=0.0015;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169632967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.950;LDAF=0.5020;AVGPOST=0.9851;RSQ=0.9802;ERATE=0.0008;THETA=0.0004;AC=1105;AN=2184 GT:DS:GL:BD 0.50595236 1
1 169632972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.6608;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169633032 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0057;AVGPOST=0.9984;RSQ=0.8938;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169633041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.920;LDAF=0.3650;AVGPOST=0.9540;RSQ=0.9279;ERATE=0.0060;THETA=0.0003;AC=821;AN=2184 GT:DS:GL:BD 0.37591577 0
1 169633084 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0073;AVGPOST=0.9963;RSQ=0.8022;ERATE=0.0006;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169633091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0503;AVGPOST=0.9967;RSQ=0.9727;ERATE=0.0004;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 169633101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0069;AVGPOST=0.9969;RSQ=0.8229;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169633114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0023;AVGPOST=0.9966;RSQ=0.4354;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169633127 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1302;AVGPOST=0.9985;RSQ=0.9942;ERATE=0.0004;THETA=0.0002;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169633130 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1307;AVGPOST=0.9983;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169633203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0069;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169633229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9301;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169633243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4424;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169633264 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6160;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169633346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.768;LDAF=0.0063;AVGPOST=0.9935;RSQ=0.6082;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169633423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.673;LDAF=0.0027;AVGPOST=0.9976;RSQ=0.6447;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169633457 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0041;AVGPOST=0.9930;RSQ=0.4259;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169633536 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0809;AVGPOST=0.9984;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 169633652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2645;AVGPOST=0.9961;RSQ=0.9934;ERATE=0.0005;THETA=0.0003;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 169633730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0090;AVGPOST=0.9991;RSQ=0.9589;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169633807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7665;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169633818 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169633825 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0660;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 169633844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4955;AVGPOST=0.9966;RSQ=0.9948;ERATE=0.0006;THETA=0.0001;AC=1083;AN=2184 GT:DS:GL:BD 0.49587911 0
1 169633867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9923;ERATE=0.0002;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169633880 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0798;AVGPOST=0.9992;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169633945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3294;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0005;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 169634056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2636;AVGPOST=0.9941;RSQ=0.9884;ERATE=0.0008;THETA=0.0002;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 169634171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.967;LDAF=0.1307;AVGPOST=0.9978;RSQ=0.9920;ERATE=0.0005;THETA=0.0005;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169634302 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0327;AVGPOST=0.9984;RSQ=0.9801;ERATE=0.0002;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 169634403 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5175;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169634453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0051;AVGPOST=0.9954;RSQ=0.6197;ERATE=0.0009;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169634464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.2643;AVGPOST=0.9970;RSQ=0.9933;ERATE=0.0007;THETA=0.0005;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 169634497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.5155;AVGPOST=0.9942;RSQ=0.9917;ERATE=0.0006;THETA=0.0001;AC=1127;AN=2184 GT:DS:GL:BD 0.51602566 1
1 169634514 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169634520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0065;AVGPOST=0.9986;RSQ=0.9269;ERATE=0.0002;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169634542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1314;AVGPOST=0.9991;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169634567 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169634663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1311;AVGPOST=0.9983;RSQ=0.9943;ERATE=0.0004;THETA=0.0006;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169634664 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0817;AVGPOST=0.9974;RSQ=0.9884;ERATE=0.0003;THETA=0.0007;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 169634716 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169634718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.949;LDAF=0.0480;AVGPOST=0.9978;RSQ=0.9831;ERATE=0.0004;THETA=0.0002;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 169634751 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1303;AVGPOST=0.9984;RSQ=0.9943;ERATE=0.0005;THETA=0.0002;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169634924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5875;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169634961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6787;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169634989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169635073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169635215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0082;AVGPOST=0.9991;RSQ=0.9608;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169635284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0057;AVGPOST=0.9982;RSQ=0.8787;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169635365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9977;RSQ=0.9189;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169635384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0807;AVGPOST=0.9986;RSQ=0.9927;ERATE=0.0005;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 169635425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.944;LDAF=0.1325;AVGPOST=0.9926;RSQ=0.9764;ERATE=0.0005;THETA=0.0004;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 169635472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8120;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169635473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0429;AVGPOST=0.9991;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 169635558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9728;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169635577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0090;AVGPOST=0.9973;RSQ=0.8859;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169635579 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4171;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169635603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0024;AVGPOST=0.9963;RSQ=0.4938;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169635651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6377;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169635847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5433;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169635853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.971;LDAF=0.1287;AVGPOST=0.9955;RSQ=0.9859;ERATE=0.0004;THETA=0.0004;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 169635884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1123;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0004;THETA=0.0006;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 169635885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169635964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9048;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169636237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3954;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 169636242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0667;AVGPOST=0.9981;RSQ=0.9878;ERATE=0.0003;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 169636303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6419;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169636373 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2642;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0007;THETA=0.0003;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 169636468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169636585 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5340;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169636668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.5081;AVGPOST=0.9914;RSQ=0.9881;ERATE=0.0010;THETA=0.0016;AC=1114;AN=2184 GT:DS:GL:BD 0.51007324 1
1 169636671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169636682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8156;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169636741 . AAGAG A 21128 PASS INDEL;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1298;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 169636854 . CAAAGAG C 1553 PASS INDEL;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0100;AVGPOST=0.9962;RSQ=0.8432;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 169636889 . G GA 396 PASS INDEL;BAVGPOST=0.985;BRSQ=0.666;LDAF=0.0304;AVGPOST=0.9686;RSQ=0.5687;ERATE=0.0094;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 169637003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6678;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169637041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0803;AVGPOST=0.9992;RSQ=0.9956;ERATE=0.0005;THETA=0.0002;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 169637078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.2102;AVGPOST=0.9976;RSQ=0.9939;ERATE=0.0007;THETA=0.0007;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 169637086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9643;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169637122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7186;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169637161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169637171 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169637198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5905;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169637254 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169637303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0671;AVGPOST=0.9915;RSQ=0.9525;ERATE=0.0004;THETA=0.0003;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 169637325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3231;AVGPOST=0.9962;RSQ=0.9927;ERATE=0.0006;THETA=0.0005;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 169637333 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.8986;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169637363 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.974;LDAF=0.1320;AVGPOST=0.9964;RSQ=0.9874;ERATE=0.0005;THETA=0.0003;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 169637387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.975;LDAF=0.1312;AVGPOST=0.9968;RSQ=0.9885;ERATE=0.0006;THETA=0.0005;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169637391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1937;AVGPOST=0.9937;RSQ=0.9841;ERATE=0.0007;THETA=0.0003;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 169637571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.8978;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169637590 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0315;AVGPOST=0.9902;RSQ=0.8780;ERATE=0.0016;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 169637639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4564;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169637640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0723;AVGPOST=0.9985;RSQ=0.9900;ERATE=0.0005;THETA=0.0006;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 169637674 . CCGG C 2494 PASS INDEL;BAVGPOST=0.987;BRSQ=0.894;LDAF=0.0540;AVGPOST=0.9953;RSQ=0.9651;ERATE=0.0003;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 169637675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.700;LDAF=0.0070;AVGPOST=0.9983;RSQ=0.8897;ERATE=0.0006;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169637676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3332;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169637770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.927;LDAF=0.0477;AVGPOST=0.9963;RSQ=0.9671;ERATE=0.0009;THETA=0.0017;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 169637771 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.953;LDAF=0.0660;AVGPOST=0.9958;RSQ=0.9721;ERATE=0.0006;THETA=0.0006;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 169637826 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5075;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169637855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.501;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5917;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169637856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.962;LDAF=0.0336;AVGPOST=0.9990;RSQ=0.9884;ERATE=0.0003;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 169637871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0275;AVGPOST=0.9966;RSQ=0.9485;ERATE=0.0005;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 169637934 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0082;AVGPOST=0.9982;RSQ=0.9229;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169637944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9182;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169638097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0078;AVGPOST=0.9985;RSQ=0.9266;ERATE=0.0007;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169638147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7870;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169638184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0088;AVGPOST=0.9975;RSQ=0.9008;ERATE=0.0005;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169638195 . TG T 11276 PASS INDEL;BAVGPOST=0.988;BRSQ=0.953;LDAF=0.1291;AVGPOST=0.9957;RSQ=0.9845;ERATE=0.0007;THETA=0.0004;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 169638199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2660;AVGPOST=0.9937;RSQ=0.9885;ERATE=0.0004;THETA=0.0003;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 169638236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0049;AVGPOST=0.9987;RSQ=0.9013;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169638265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0049;AVGPOST=0.9972;RSQ=0.7657;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169638359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.955;LDAF=0.4946;AVGPOST=0.9872;RSQ=0.9813;ERATE=0.0014;THETA=0.0003;AC=1087;AN=2184 GT:DS:GL:BD 0.49771062 0
1 169638461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8624;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169638470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.963;LDAF=0.3931;AVGPOST=0.9931;RSQ=0.9887;ERATE=0.0008;THETA=0.0003;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 169638501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169638526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5897;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169638529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1326;AVGPOST=0.9983;RSQ=0.9941;ERATE=0.0005;THETA=0.0003;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 169638544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169638551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9688;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169638601 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9979;RSQ=0.8767;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169638687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1313;AVGPOST=0.9985;RSQ=0.9944;ERATE=0.0005;THETA=0.0007;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 169638786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169638847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0714;AVGPOST=0.9897;RSQ=0.9378;ERATE=0.0006;THETA=0.0004;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 169638905 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9064;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169638936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.4640;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169638987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8433;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169639003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0119;AVGPOST=0.9985;RSQ=0.9437;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169639030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1298;AVGPOST=0.9986;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 169639080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169639108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5118;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169639211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1290;AVGPOST=0.9974;RSQ=0.9910;ERATE=0.0005;THETA=0.0005;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 169639552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6292;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169639625 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5720;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169639676 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0343;AVGPOST=0.9983;RSQ=0.9827;ERATE=0.0002;THETA=0.0008;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 169639772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7475;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169639851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169639855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5297;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169639872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6590;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169639893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0801;AVGPOST=0.9989;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 169639983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9311;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169639998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9816;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 169640000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3958;AVGPOST=0.9957;RSQ=0.9934;ERATE=0.0005;THETA=0.0002;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 169640035 . TG T 11110 PASS INDEL;BAVGPOST=0.964;BRSQ=0.941;LDAF=0.4718;AVGPOST=0.9450;RSQ=0.9247;ERATE=0.0092;THETA=0.0008;AC=1045;AN=2184 GT:DS:GL:BD 0.47847986 0
1 169640036 rs34668742 GT G 58502 PASS INDEL;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.4951;AVGPOST=0.9931;RSQ=0.9905;ERATE=0.0007;THETA=0.0004;AC=1080;AN=2184 GT:DS:GL:BD 0.49450549 0
1 169640109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1301;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 169640218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0142;AVGPOST=0.9977;RSQ=0.9444;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169640260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5526;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169640269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169640513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169640550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5489;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169640625 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169640642 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1307;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 169640665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1308;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 169640707 rs66840071 T TG 109346 PASS INDEL;BAVGPOST=1.000;BRSQ=0;LDAF=0.9997;AVGPOST=0.9995;RSQ=0.0578;ERATE=0.0004;THETA=0.0005;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 169640745 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7152;ERATE=0.0004;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169640756 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169640785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 169640831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0817;AVGPOST=0.9991;RSQ=0.9960;ERATE=0.0003;THETA=0.0021;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 169640943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8948;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169640985 . CT C 113 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7042;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169640990 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8581;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169641108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169641184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169641252 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0048;AVGPOST=0.9974;RSQ=0.8160;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169641317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5521;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169641380 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169641381 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169641384 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8089;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169641411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0049;AVGPOST=0.9985;RSQ=0.8717;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169641423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169641607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169641626 . CT C 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7518;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169641731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3916;AVGPOST=0.9962;RSQ=0.9946;ERATE=0.0006;THETA=0.0002;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 169641750 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5068;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169641834 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0450;AVGPOST=0.9972;RSQ=0.9763;ERATE=0.0003;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 169642096 rs77653989 C CA 20894 PASS INDEL;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.2600;AVGPOST=0.9941;RSQ=0.9887;ERATE=0.0009;THETA=0.0008;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 169642187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2628;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0005;THETA=0.0005;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 169642216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5576;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169642225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7530;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169642449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3934;AVGPOST=0.9974;RSQ=0.9962;ERATE=0.0006;THETA=0.0004;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 169642473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169642475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169642515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1279;AVGPOST=0.9975;RSQ=0.9912;ERATE=0.0006;THETA=0.0008;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 169642516 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169642535 rs11407937 C CA 13400 PASS INDEL;BAVGPOST=0.970;BRSQ=0.958;LDAF=0.3745;AVGPOST=0.9702;RSQ=0.9573;ERATE=0.0042;THETA=0.0001;AC=835;AN=2184 GT:DS:GL:BD 0.38232601 0
1 169642577 . A AG 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6535;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169642589 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7599;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169642676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1126;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 169642704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9121;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169642713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6314;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169642775 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4506;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169642854 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1237;AVGPOST=0.9986;RSQ=0.9950;ERATE=0.0004;THETA=0.0006;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 169642957 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9833;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169643085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7589;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169643116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169643119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9993;RSQ=0.9665;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169643176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1297;AVGPOST=0.9986;RSQ=0.9949;ERATE=0.0004;THETA=0.0005;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 169643261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169643496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0058;AVGPOST=0.9990;RSQ=0.9359;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169643548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0479;AVGPOST=0.9985;RSQ=0.9871;ERATE=0.0004;THETA=0.0003;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 169643620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0974;AVGPOST=0.9972;RSQ=0.9885;ERATE=0.0005;THETA=0.0003;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 169643701 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.0815;AVGPOST=0.9982;RSQ=0.9905;ERATE=0.0004;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 169643704 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3930;AVGPOST=0.9964;RSQ=0.9937;ERATE=0.0004;THETA=0.0006;AC=860;AN=2184 GT:DS:GL:BD 0.39377290 0
1 169643708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3937;AVGPOST=0.9962;RSQ=0.9938;ERATE=0.0004;THETA=0.0005;AC=860;AN=2184 GT:DS:GL:BD 0.39377290 0
1 169643769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0097;AVGPOST=0.9989;RSQ=0.9559;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 169643792 . ACTT A 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5111;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169643902 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0692;AVGPOST=0.9994;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 169643919 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0162;AVGPOST=0.9994;RSQ=0.9833;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 169644117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0426;AVGPOST=0.9994;RSQ=0.9943;ERATE=0.0002;THETA=0.0006;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 169644161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169644307 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169644351 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9470;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169644470 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3941;AVGPOST=0.9963;RSQ=0.9934;ERATE=0.0009;THETA=0.0003;AC=860;AN=2184 GT:DS:GL:BD 0.39377290 0
1 169644532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7868;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169644570 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.874;LDAF=0.0094;AVGPOST=0.9966;RSQ=0.8682;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169644698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169644794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169644800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5607;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169644893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0047;AVGPOST=0.9990;RSQ=0.9246;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169644900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.850;LDAF=0.0079;AVGPOST=0.9960;RSQ=0.8083;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169645054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6834;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169645079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.8881;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169645121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169645122 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7612;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169645179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9400;ERATE=0.0005;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169645180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7343;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169645242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169645251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169645256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0130;AVGPOST=0.9994;RSQ=0.9794;ERATE=0.0003;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169645392 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169645454 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3951;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0006;THETA=0.0003;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 169645611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169645771 . T TA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4157;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169645811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169645886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.694;LDAF=0.0036;AVGPOST=0.9971;RSQ=0.6988;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169645981 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169646013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9996;RSQ=0.9598;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169646164 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3952;AVGPOST=0.9967;RSQ=0.9947;ERATE=0.0007;THETA=0.0096;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 169646184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8456;ERATE=0.0003;THETA=0.0028;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169646235 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0025;AVGPOST=0.9960;RSQ=0.4259;ERATE=0.0005;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169646237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4559;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169646331 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.901;LDAF=0.0497;AVGPOST=0.9908;RSQ=0.9227;ERATE=0.0011;THETA=0.0031;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 169646497 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.785;LDAF=0.0087;AVGPOST=0.9919;RSQ=0.6531;ERATE=0.0008;THETA=0.0035;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169646564 . G GTCAGTCAAC 197 PASS INDEL;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0031;AVGPOST=0.9963;RSQ=0.4824;ERATE=0.0006;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169646692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.0845;AVGPOST=0.9953;RSQ=0.9812;ERATE=0.0003;THETA=0.0080;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 169646861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.980;LDAF=0.4396;AVGPOST=0.9823;RSQ=0.9749;ERATE=0.0017;THETA=0.0143;AC=956;AN=2184 GT:DS:GL:BD 0.43772894 0
1 169647037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.929;LDAF=0.0697;AVGPOST=0.9949;RSQ=0.9690;ERATE=0.0005;THETA=0.0006;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 169647043 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.641;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6034;ERATE=0.0003;THETA=0.0080;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169647046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1093;AVGPOST=0.9905;RSQ=0.9621;ERATE=0.0005;THETA=0.0075;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 169647200 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.839;LDAF=0.0398;AVGPOST=0.9866;RSQ=0.8612;ERATE=0.0015;THETA=0.0194;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 169647423 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.973;LDAF=0.0928;AVGPOST=0.9930;RSQ=0.9679;ERATE=0.0005;THETA=0.0074;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 169647437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8761;ERATE=0.0002;THETA=0.0201;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169647599 . CAAAT C 140 PASS INDEL;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6100;ERATE=0.0004;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169647687 . GT G 283 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8154;ERATE=0.0004;THETA=0.0173;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169647829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4488;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169647969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0074;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169648105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1363;AVGPOST=0.9944;RSQ=0.9804;ERATE=0.0013;THETA=0.0006;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 169648286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169648302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169648304 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0146;AVGPOST=0.9992;RSQ=0.9777;ERATE=0.0003;THETA=0.0011;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169648314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169648341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3405;AVGPOST=0.9973;RSQ=0.9957;ERATE=0.0004;THETA=0.0031;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 169648355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0661;AVGPOST=0.9990;RSQ=0.9938;ERATE=0.0003;THETA=0.0009;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 169648383 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169648387 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9659;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169648402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0069;AVGPOST=0.9992;RSQ=0.9486;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169648469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3424;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0009;THETA=0.0003;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 169648643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169648798 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169648916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6260;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169648939 . GT G 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5828;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169649079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169649287 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7612;ERATE=0.0006;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169649356 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8174;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169649412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169649441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7713;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169649509 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0129;AVGPOST=0.9988;RSQ=0.9631;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 169649531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0631;AVGPOST=0.9988;RSQ=0.9911;ERATE=0.0003;THETA=0.0007;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 169649553 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9645;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 169649567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169649687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.958;LDAF=0.0261;AVGPOST=0.9950;RSQ=0.9313;ERATE=0.0003;THETA=0.0009;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 169649691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0036;AVGPOST=0.9994;RSQ=0.9351;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169649886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8786;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169649968 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0040;AVGPOST=0.9986;RSQ=0.8654;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169649969 . C CA 129 PASS INDEL;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4207;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169649973 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.798;LDAF=0.0049;AVGPOST=0.9968;RSQ=0.7260;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169649975 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.934;LDAF=0.2834;AVGPOST=0.9636;RSQ=0.9362;ERATE=0.0030;THETA=0.0003;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 169649976 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0058;AVGPOST=0.9964;RSQ=0.7453;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169650150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6196;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169650185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9158;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169650205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0189;AVGPOST=0.9981;RSQ=0.9639;ERATE=0.0002;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 169650530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6310;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169650581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169650719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2143;AVGPOST=0.9979;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 169650720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0003;AVGPOST=0.9993;RSQ=0.2628;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169650744 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0141;AVGPOST=0.9995;RSQ=0.9869;ERATE=0.0002;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169650747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5670;AVGPOST=0.9964;RSQ=0.9946;ERATE=0.0003;THETA=0.0015;AC=1236;AN=2184 GT:DS:GL:BD 0.56593406 1
1 169650768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169650804 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2141;AVGPOST=0.9979;RSQ=0.9951;ERATE=0.0003;THETA=0.0010;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 169650826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0042;AVGPOST=0.9977;RSQ=0.7898;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169650844 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1597;AVGPOST=0.9974;RSQ=0.9920;ERATE=0.0005;THETA=0.0011;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 169650924 rs55893557 CTAT C 4737 PASS INDEL;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0373;AVGPOST=0.9973;RSQ=0.9710;ERATE=0.0003;THETA=0.0011;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 169650927 rs55893557 T TC 82 PASS INDEL;BAVGPOST=0.996;BRSQ=0.659;LDAF=0.0060;AVGPOST=0.9954;RSQ=0.6912;ERATE=0.0009;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169650950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8592;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 169651044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.994;LDAF=0.5626;AVGPOST=0.9918;RSQ=0.9882;ERATE=0.0012;THETA=0.0115;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 169651096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5621;ERATE=0.0004;THETA=0.0131;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169651194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0085;AVGPOST=0.9993;RSQ=0.9595;ERATE=0.0003;THETA=0.0155;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 169651239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0106;AVGPOST=0.9967;RSQ=0.8865;ERATE=0.0009;THETA=0.0038;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 169651269 . T TC 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6959;ERATE=0.0003;THETA=0.0068;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169651309 rs67920806 ACTC A 27719 PASS INDEL;BAVGPOST=0.971;BRSQ=0.955;LDAF=0.3077;AVGPOST=0.9659;RSQ=0.9414;ERATE=0.0007;THETA=0.0007;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 169651411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8286;ERATE=0.0003;THETA=0.0210;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169651644 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8439;ERATE=0.0010;THETA=0.0211;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169651653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5547;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169651684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.923;LDAF=0.4049;AVGPOST=0.9561;RSQ=0.9384;ERATE=0.0014;THETA=0.0052;AC=877;AN=2184 GT:DS:GL:BD 0.40155679 0
1 169651752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4333;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169651770 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.852;LDAF=0.0505;AVGPOST=0.9818;RSQ=0.8620;ERATE=0.0004;THETA=0.0028;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 169651832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.924;LDAF=0.1610;AVGPOST=0.9754;RSQ=0.9302;ERATE=0.0023;THETA=0.0055;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 169651882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0173;AVGPOST=0.9987;RSQ=0.9663;ERATE=0.0009;THETA=0.0098;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 169651943 . T TA 6672 PASS INDEL;BAVGPOST=0.987;BRSQ=0.912;LDAF=0.0537;AVGPOST=0.9896;RSQ=0.9317;ERATE=0.0004;THETA=0.0046;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 169651978 . G GC 311 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8990;ERATE=0.0003;THETA=0.0036;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169652023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169652029 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9804;ERATE=0.0003;THETA=0.0111;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 169652080 . TA T 4283 PASS INDEL;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0280;AVGPOST=0.9987;RSQ=0.9802;ERATE=0.0003;THETA=0.0033;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 169652185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0130;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169652258 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5017;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169652301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6564;ERATE=0.0002;THETA=0.0060;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169652310 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8552;ERATE=0.0004;THETA=0.0061;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 169652476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6667;ERATE=0.0003;THETA=0.0106;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169652508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169652619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0027;AVGPOST=0.9976;RSQ=0.6759;ERATE=0.0003;THETA=0.0112;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169652683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0062;AVGPOST=0.9992;RSQ=0.9385;ERATE=0.0004;THETA=0.0048;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169652690 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169652746 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7048;ERATE=0.0003;THETA=0.0158;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169652772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.932;LDAF=0.2783;AVGPOST=0.9578;RSQ=0.9263;ERATE=0.0066;THETA=0.0074;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 169652846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9358;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169652975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4808;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169653026 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6596;ERATE=0.0003;THETA=0.0077;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169653047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.3318;ERATE=0.0003;THETA=0.0039;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 169653048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0362;AVGPOST=0.9986;RSQ=0.9851;ERATE=0.0004;THETA=0.0009;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 169653091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0771;AVGPOST=0.9978;RSQ=0.9907;ERATE=0.0003;THETA=0.0013;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 169653156 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0170;AVGPOST=0.9954;RSQ=0.8845;ERATE=0.0007;THETA=0.0054;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 169653253 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7925;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169653332 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6442;ERATE=0.0002;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169653380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9880;ERATE=0.0003;THETA=0.0014;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 169653453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.7957;ERATE=0.0006;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 169653509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169653549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.0779;AVGPOST=0.9974;RSQ=0.9886;ERATE=0.0006;THETA=0.0006;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169653574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4603;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169653620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.699;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6986;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169653659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.1772;AVGPOST=0.9898;RSQ=0.9742;ERATE=0.0005;THETA=0.0004;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 169653675 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5263;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169653795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.971;LDAF=0.1606;AVGPOST=0.9819;RSQ=0.9478;ERATE=0.0030;THETA=0.0008;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 169653819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.691;LDAF=0.0060;AVGPOST=0.9956;RSQ=0.6865;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 169653991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0992;AVGPOST=0.9965;RSQ=0.9882;ERATE=0.0004;THETA=0.0003;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 169654216 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7974;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169654279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0793;AVGPOST=0.9959;RSQ=0.9840;ERATE=0.0005;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 169654369 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169654400 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.967;LDAF=0.0985;AVGPOST=0.9978;RSQ=0.9925;ERATE=0.0003;THETA=0.0006;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 169654439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.803;LDAF=0.0131;AVGPOST=0.9941;RSQ=0.8259;ERATE=0.0005;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 169654499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6617;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169654510 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0184;AVGPOST=0.9994;RSQ=0.9847;ERATE=0.0003;THETA=0.0023;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 169654542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0067;AVGPOST=0.9984;RSQ=0.8980;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169654624 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169654625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169654639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8571;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169654665 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5162;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169654674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6470;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169654755 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0125;AVGPOST=0.9989;RSQ=0.9621;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 169654798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0434;AVGPOST=0.9970;RSQ=0.9706;ERATE=0.0005;THETA=0.0017;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 169654875 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4930;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169654913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8529;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169654921 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0183;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 169654995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5418;ERATE=0.0003;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169654996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1782;AVGPOST=0.9955;RSQ=0.9884;ERATE=0.0003;THETA=0.0006;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 169655063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169655079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.989;LDAF=0.3715;AVGPOST=0.9904;RSQ=0.9864;ERATE=0.0004;THETA=0.0005;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 169655342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9321;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 169655351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7936;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169655511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169655513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169655516 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9692;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 169655742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.7391;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169655931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169655972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0143;AVGPOST=0.9986;RSQ=0.9590;ERATE=0.0004;THETA=0.0045;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 169656002 . CCA C 414 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6598;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169656152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169656197 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169656236 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8963;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169656245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169656477 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.5781;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 169656519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.553;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6684;ERATE=0.0004;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169656598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0081;AVGPOST=0.9965;RSQ=0.8506;ERATE=0.0008;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 169656607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169656641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9254;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169656681 . T TGCA 890 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9108;ERATE=0.0002;THETA=0.0026;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 169656726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5081;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 169656865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9525;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169656873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9490;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 169656882 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.652;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7735;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169656888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0225;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0002;THETA=0.0010;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 169656983 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0240;AVGPOST=0.9989;RSQ=0.9848;ERATE=0.0002;THETA=0.0031;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 169657055 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1891;AVGPOST=0.9975;RSQ=0.9941;ERATE=0.0002;THETA=0.0003;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 169657066 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 169657096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8524;ERATE=0.0002;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 169657129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9469;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 169657198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9689;ERATE=0.0003;THETA=0.0056;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0