1092
10000
1 178968543 . T TG 1443 PASS INDEL;BAVGPOST=0.967;BRSQ=0.927;LDAF=0.2448;AVGPOST=0.9727;RSQ=0.9458;ERATE=0.0017;THETA=0.0005;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 178968545 rs80203668 G GA 20157 PASS INDEL;BAVGPOST=0.984;BRSQ=0.967;LDAF=0.2590;AVGPOST=0.9865;RSQ=0.9761;ERATE=0.0003;THETA=0.0003;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 178968549 . A AC 4759 PASS INDEL;BAVGPOST=0.984;BRSQ=0.968;LDAF=0.2589;AVGPOST=0.9867;RSQ=0.9764;ERATE=0.0003;THETA=0.0004;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 178968601 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178968692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4841;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178968824 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.542;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7177;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178968840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4063;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178968841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4108;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178968872 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8870;ERATE=0.0005;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 178968878 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5123;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178968879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8493;ERATE=0.0004;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178968887 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0085;AVGPOST=0.9957;RSQ=0.7915;ERATE=0.0006;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 178969048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8083;ERATE=0.0004;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178969453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0704;AVGPOST=0.9982;RSQ=0.9895;ERATE=0.0003;THETA=0.0095;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 178969483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178969489 . A AT 789 PASS INDEL;BAVGPOST=0.948;BRSQ=0.570;LDAF=0.0896;AVGPOST=0.9100;RSQ=0.5304;ERATE=0.0318;THETA=0.0006;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 178969491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0222;AVGPOST=0.9985;RSQ=0.9723;ERATE=0.0004;THETA=0.0022;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 178969628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6238;ERATE=0.0005;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178969637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0196;AVGPOST=0.9983;RSQ=0.9664;ERATE=0.0005;THETA=0.0021;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 178969766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.713;LDAF=0.0123;AVGPOST=0.9870;RSQ=0.5670;ERATE=0.0032;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 178969776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4031;ERATE=0.0005;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178969781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.972;LDAF=0.2209;AVGPOST=0.9736;RSQ=0.9459;ERATE=0.0007;THETA=0.0047;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 178969790 . T TTTTC 116 PASS INDEL;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3327;ERATE=0.0007;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178969859 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5281;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178969910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.929;LDAF=0.2920;AVGPOST=0.9423;RSQ=0.9023;ERATE=0.0008;THETA=0.0037;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 178969918 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0193;AVGPOST=0.9984;RSQ=0.9655;ERATE=0.0004;THETA=0.0085;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 178970018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.539;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3982;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178970057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0069;AVGPOST=0.9939;RSQ=0.6348;ERATE=0.0009;THETA=0.0085;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 178970113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8054;ERATE=0.0003;THETA=0.0080;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178970167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8361;ERATE=0.0003;THETA=0.0086;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178970212 . TTAACCA T 1442 PASS INDEL;BAVGPOST=0.997;BRSQ=0.887;LDAF=0.0130;AVGPOST=0.9937;RSQ=0.8127;ERATE=0.0024;THETA=0.0072;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 178970279 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.850;LDAF=0.0102;AVGPOST=0.9973;RSQ=0.9009;ERATE=0.0003;THETA=0.0138;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 178970323 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7673;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178970333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.696;LDAF=0.0040;AVGPOST=0.9966;RSQ=0.6380;ERATE=0.0004;THETA=0.0050;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178970439 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.950;LDAF=0.0526;AVGPOST=0.9890;RSQ=0.9180;ERATE=0.0005;THETA=0.0062;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 178970506 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4832;ERATE=0.0004;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178970548 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4268;ERATE=0.0003;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178970587 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8106;ERATE=0.0003;THETA=0.0185;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178970686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7466;ERATE=0.0003;THETA=0.0101;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178970712 . TGA T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4756;ERATE=0.0005;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178970797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8756;ERATE=0.0009;THETA=0.0283;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 178970901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9241;ERATE=0.0003;THETA=0.0097;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 178970909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5196;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178970941 . CA C 2106 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0188;AVGPOST=0.9981;RSQ=0.9623;ERATE=0.0003;THETA=0.0057;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 178970997 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178971038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5057;ERATE=0.0004;THETA=0.0122;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178971048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7023;ERATE=0.0004;THETA=0.0073;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178971250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8196;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178971339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.670;LDAF=0.0039;AVGPOST=0.9946;RSQ=0.4015;ERATE=0.0022;THETA=0.0049;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178971400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178971509 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.884;LDAF=0.0100;AVGPOST=0.9931;RSQ=0.7219;ERATE=0.0007;THETA=0.0208;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 178971552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8920;ERATE=0.0003;THETA=0.0092;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 178971774 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.963;LDAF=0.6882;AVGPOST=0.9684;RSQ=0.9449;ERATE=0.0040;THETA=0.0052;AC=1508;AN=2184 GT:DS:GL:BD 0.69047618 1
1 178972106 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8459;ERATE=0.0005;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178972114 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178972180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9994;RSQ=0.9864;ERATE=0.0004;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 178972213 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.4949;AVGPOST=0.9875;RSQ=0.9813;ERATE=0.0011;THETA=0.0009;AC=1078;AN=2184 GT:DS:GL:BD 0.49358973 0
1 178972276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0020;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 178972326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178972368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0087;AVGPOST=0.9984;RSQ=0.9278;ERATE=0.0005;THETA=0.0037;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 178972411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9357;ERATE=0.0003;THETA=0.0027;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 178972615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5526;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178972616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6057;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178972659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0192;AVGPOST=1.0000;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 178972833 . TG T 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4102;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178972906 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7442;ERATE=0.0010;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178972922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1630;AVGPOST=0.9961;RSQ=0.9893;ERATE=0.0005;THETA=0.0005;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 178972941 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5811;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178972947 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1211;AVGPOST=0.9983;RSQ=0.9937;ERATE=0.0003;THETA=0.0005;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 178973079 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6127;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178973088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178973138 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178973221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.953;LDAF=0.1039;AVGPOST=0.9912;RSQ=0.9655;ERATE=0.0004;THETA=0.0010;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 178973281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.8971;ERATE=0.0003;THETA=0.0056;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 178973343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178973368 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0178;AVGPOST=0.9985;RSQ=0.9743;ERATE=0.0004;THETA=0.0013;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 178973476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178973571 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8970;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178973771 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1187;AVGPOST=0.9979;RSQ=0.9911;ERATE=0.0006;THETA=0.0005;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 178973829 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.961;LDAF=0.1378;AVGPOST=0.9962;RSQ=0.9865;ERATE=0.0005;THETA=0.0002;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 178973852 . A AAG 385 PASS INDEL;BAVGPOST=0.994;BRSQ=0.906;LDAF=0.0267;AVGPOST=0.9943;RSQ=0.9121;ERATE=0.0009;THETA=0.0009;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 178973877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6145;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178973886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4997;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178973914 . ATCC A 141 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178973942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6353;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178973997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5387;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178974042 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1143;AVGPOST=0.9980;RSQ=0.9916;ERATE=0.0005;THETA=0.0007;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 178974047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.7173;AVGPOST=0.9855;RSQ=0.9760;ERATE=0.0004;THETA=0.0003;AC=1567;AN=2184 GT:DS:GL:BD 0.71749085 1
1 178974057 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0563;AVGPOST=0.9945;RSQ=0.9616;ERATE=0.0003;THETA=0.0005;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 178974126 . TA T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178974168 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9997;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 178974274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2518;AVGPOST=0.9956;RSQ=0.9905;ERATE=0.0005;THETA=0.0004;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 178974307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.8468;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178974395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.854;LDAF=0.0121;AVGPOST=0.9962;RSQ=0.8866;ERATE=0.0006;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 178974416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0454;AVGPOST=0.9975;RSQ=0.9785;ERATE=0.0003;THETA=0.0003;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 178974549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0033;AVGPOST=0.9983;RSQ=0.8064;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 178974575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178974678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178974768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178974810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2334;AVGPOST=0.9952;RSQ=0.9899;ERATE=0.0010;THETA=0.0005;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 178974858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0191;AVGPOST=0.9993;RSQ=0.9836;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 178975010 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178975066 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8215;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 178975183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0081;AVGPOST=0.9985;RSQ=0.9345;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 178975390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9347;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 178975555 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.7944;ERATE=0.0012;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178975572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7452;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178975632 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8717;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178975737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0190;AVGPOST=0.9995;RSQ=0.9868;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 178975746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9997;RSQ=0.9922;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 178975784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5561;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178975885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0189;AVGPOST=0.9997;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 178975934 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0488;AVGPOST=0.9962;RSQ=0.9676;ERATE=0.0005;THETA=0.0003;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 178976221 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7404;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178976329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178976339 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0395;AVGPOST=0.9993;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 178976341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5066;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178976360 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0392;AVGPOST=0.9990;RSQ=0.9885;ERATE=0.0003;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 178976411 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.9091;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 178976421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.5066;AVGPOST=0.9907;RSQ=0.9871;ERATE=0.0017;THETA=0.0004;AC=1108;AN=2184 GT:DS:GL:BD 0.50732601 1
1 178976458 . CAG C 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6532;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178976520 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178976556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3919;AVGPOST=0.9972;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=853;AN=2184 GT:DS:GL:BD 0.39056778 0
1 178976557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8812;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178976619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178976624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9996;RSQ=0.9901;ERATE=0.0003;THETA=0.0013;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 178976632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178976653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178976712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0041;AVGPOST=0.9994;RSQ=0.9269;ERATE=0.0006;THETA=0.0019;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 178976731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1191;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 178976756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9197;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 178977024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5703;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178977120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8799;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 178977142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.578;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178977164 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1216;AVGPOST=0.9979;RSQ=0.9919;ERATE=0.0003;THETA=0.0034;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 178977368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.854;LDAF=0.0099;AVGPOST=0.9947;RSQ=0.7728;ERATE=0.0006;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 178977379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4843;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178977404 MERGED_DEL_2_6421 TCATTTAACAAACATTTATTGAACCCCCAATATGTATCTAGCACTGTTCTAGGCATTGGGAATATAGCAGTAAGTAAGATAGGCAAAATTCCTAACCTCATACAGCTTATATTCCAATGGGGGGAATATAATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTTTT TGCAGTGAGCCAAGATCGTGCCAC . . SV;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8152;ERATE=0.0005;THETA=0.0006;CIEND=-109,44;CIPOS=-125,32;END=178979698;HOMLEN=1;HOMSEQ=C;SOURCE=BreakDancer_178977379_17897965 GT:DS:GL:BD 0.00183150 0
1 178977440 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.755;LDAF=0.0041;AVGPOST=0.9966;RSQ=0.6337;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 178977542 . AT A 304 PASS INDEL;BAVGPOST=0.950;BRSQ=0.479;LDAF=0.1200;AVGPOST=0.8438;RSQ=0.4214;ERATE=0.0078;THETA=0.0017;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 178977583 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.810;BRSQ=0.230;LDAF=0.1681;AVGPOST=0.8570;RSQ=0.5836;ERATE=0.0044;THETA=0.0015;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 178977586 rs11267833 ATTTTTTTTTTTTTTTT A 55 PASS INDEL;BAVGPOST=0.945;BRSQ=0.045;LDAF=0.1108;AVGPOST=0.8332;RSQ=0.3207;ERATE=0.0075;THETA=0.0082;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 178977626 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.710;BRSQ=0.476;LDAF=0.4536;AVGPOST=0.7094;RSQ=0.4997;ERATE=0.0527;THETA=0.0011;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 178977815 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0044;AVGPOST=0.9986;RSQ=0.8734;ERATE=0.0008;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 178977939 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0054;AVGPOST=0.9973;RSQ=0.7925;ERATE=0.0014;THETA=0.0037;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 178978090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9248;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 178978188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8709;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 178978401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9651;ERATE=0.0003;THETA=0.0055;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178978409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.963;LDAF=0.6476;AVGPOST=0.9710;RSQ=0.9560;ERATE=0.0044;THETA=0.0027;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 178978611 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0050;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178978620 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8670;ERATE=0.0003;THETA=0.0045;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178978636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0066;AVGPOST=0.9982;RSQ=0.8858;ERATE=0.0009;THETA=0.0017;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 178978714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9999;RSQ=0.9826;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 178978751 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.977;LDAF=0.1501;AVGPOST=0.9882;RSQ=0.9667;ERATE=0.0021;THETA=0.0038;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 178978829 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0180;AVGPOST=0.9993;RSQ=0.9867;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 178978916 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178978941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9180;ERATE=0.0004;THETA=0.0040;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178978989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5579;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178979059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178979070 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178979093 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8662;ERATE=0.0003;THETA=0.0034;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178979101 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8050;ERATE=0.0005;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178979439 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178979457 . T TG 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6262;ERATE=0.0006;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178979459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.755;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.7093;ERATE=0.0004;THETA=0.0083;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178979506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6652;ERATE=0.0004;THETA=0.0125;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178979507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8413;ERATE=0.0005;THETA=0.0041;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 178979579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7759;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178979698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.703;LDAF=0.0035;AVGPOST=0.9964;RSQ=0.5740;ERATE=0.0008;THETA=0.0061;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178979808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0003;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178979885 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0410;AVGPOST=0.9989;RSQ=0.9888;ERATE=0.0003;THETA=0.0006;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 178979982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6347;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178980030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0047;AVGPOST=0.9983;RSQ=0.8699;ERATE=0.0004;THETA=0.0021;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 178980090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9063;ERATE=0.0003;THETA=0.0067;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178980177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.708;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7167;ERATE=0.0011;THETA=0.0043;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178980332 . C CT 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178980387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5257;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178980418 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6667;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178980536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0039;AVGPOST=0.9983;RSQ=0.8148;ERATE=0.0012;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 178980791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6367;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178980932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.810;LDAF=0.0078;AVGPOST=0.9974;RSQ=0.8903;ERATE=0.0004;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 178980949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9973;RSQ=0.7452;ERATE=0.0008;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 178980979 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3878;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178981011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8026;ERATE=0.0004;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 178981112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8198;ERATE=0.0003;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178981184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5833;ERATE=0.0005;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178981259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0153;AVGPOST=0.9985;RSQ=0.9625;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 178981416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7622;AVGPOST=0.9958;RSQ=0.9919;ERATE=0.0007;THETA=0.0003;AC=1663;AN=2184 GT:DS:GL:BD 0.76144689 1
1 178981619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1615;AVGPOST=0.9973;RSQ=0.9916;ERATE=0.0003;THETA=0.0010;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 178981665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6359;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178981744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9533;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178981773 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178981846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9991;RSQ=0.9092;ERATE=0.0005;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 178982127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.804;LDAF=0.0101;AVGPOST=0.9952;RSQ=0.8185;ERATE=0.0019;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 178982217 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7684;AVGPOST=0.9949;RSQ=0.9904;ERATE=0.0006;THETA=0.0003;AC=1678;AN=2184 GT:DS:GL:BD 0.76831502 1
1 178982286 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.831;BRSQ=0.743;LDAF=0.5384;AVGPOST=0.8810;RSQ=0.8510;ERATE=0.0008;THETA=0.0002;AC=1212;AN=2184 GT:DS:GL:BD 0.55494505 1
1 178982289 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.831;BRSQ=0.743;LDAF=0.5318;AVGPOST=0.8773;RSQ=0.8450;ERATE=0.0010;THETA=0.0004;AC=1195;AN=2184 GT:DS:GL:BD 0.54716116 1
1 178982321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5386;ERATE=0.0005;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178982345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.579;LDAF=0.0151;AVGPOST=0.9810;RSQ=0.4884;ERATE=0.0012;THETA=0.0054;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 178982366 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.776;LDAF=0.0045;AVGPOST=0.9968;RSQ=0.6849;ERATE=0.0007;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 178982597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9393;ERATE=0.0005;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 178982793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9789;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 178982881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5418;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178982979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0125;AVGPOST=0.9978;RSQ=0.9334;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 178983120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.988;LDAF=0.6560;AVGPOST=0.9871;RSQ=0.9796;ERATE=0.0010;THETA=0.0011;AC=1442;AN=2184 GT:DS:GL:BD 0.66025639 1
1 178983133 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.8261;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178983152 . TCA T 57 PASS INDEL;BAVGPOST=0.992;BRSQ=0.599;LDAF=0.0202;AVGPOST=0.9721;RSQ=0.4474;ERATE=0.0059;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 178983276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0045;AVGPOST=0.9980;RSQ=0.8238;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 178983333 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6677;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178983521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1676;AVGPOST=0.9986;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 178983635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0558;AVGPOST=0.9990;RSQ=0.9923;ERATE=0.0004;THETA=0.0005;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 178983744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0552;AVGPOST=0.9990;RSQ=0.9932;ERATE=0.0004;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 178983847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0143;AVGPOST=0.9987;RSQ=0.9666;ERATE=0.0004;THETA=0.0014;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 178983939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.1105;ERATE=0.0007;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 178984003 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178984004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8891;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178984086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4208;AVGPOST=0.9961;RSQ=0.9942;ERATE=0.0005;THETA=0.0003;AC=917;AN=2184 GT:DS:GL:BD 0.41987181 0
1 178984155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6618;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178984201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.653;LDAF=0.0054;AVGPOST=0.9936;RSQ=0.5184;ERATE=0.0013;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 178984265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0104;AVGPOST=0.9983;RSQ=0.9288;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 178984318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6536;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178984369 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0032;AVGPOST=0.9957;RSQ=0.4889;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178984470 rs76757578 C CA 543 PASS INDEL;BAVGPOST=0.807;BRSQ=0.267;LDAF=0.2442;AVGPOST=0.7000;RSQ=0.2959;ERATE=0.0519;THETA=0.0004;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 178984487 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0122;AVGPOST=0.9957;RSQ=0.8554;ERATE=0.0008;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 178984503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9013;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 178984559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0227;AVGPOST=0.9994;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 178984696 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5721;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178984789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1349;AVGPOST=0.9984;RSQ=0.9956;ERATE=0.0003;THETA=0.0007;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 178984798 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7762;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178984848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0062;AVGPOST=0.9986;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 178984849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0546;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 178984907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5467;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178984966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0043;AVGPOST=0.9961;RSQ=0.6018;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 178985169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0548;AVGPOST=0.9991;RSQ=0.9928;ERATE=0.0005;THETA=0.0004;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 178985214 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.0495;ERATE=0.0005;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 178985361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7656;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178985373 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6288;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178985419 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178985545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178985658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5095;AVGPOST=0.9985;RSQ=0.9979;ERATE=0.0004;THETA=0.0002;AC=1113;AN=2184 GT:DS:GL:BD 0.50961536 1
1 178985693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178985758 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178985895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0130;AVGPOST=0.9966;RSQ=0.8898;ERATE=0.0005;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 178986136 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178986279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0375;AVGPOST=0.9989;RSQ=0.9902;ERATE=0.0003;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 178986290 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0147;AVGPOST=0.9993;RSQ=0.9860;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 178986292 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9069;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178986471 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9294;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 178986487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178986554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178986555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3570;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=779;AN=2184 GT:DS:GL:BD 0.35668498 0
1 178986624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3506;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 178986689 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6983;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178986849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178986931 . CT C 486 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 178986951 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8247;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178987173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0119;AVGPOST=0.9984;RSQ=0.9534;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 178987178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6352;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178987242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178987274 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9211;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 178987417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4941;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=1079;AN=2184 GT:DS:GL:BD 0.49404761 0
1 178987481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3499;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 178987566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3601;AVGPOST=0.9975;RSQ=0.9957;ERATE=0.0007;THETA=0.0003;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 178987598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0188;AVGPOST=0.9965;RSQ=0.9351;ERATE=0.0005;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 178988022 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0056;AVGPOST=0.9984;RSQ=0.9138;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 178988073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178988142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1729;AVGPOST=0.9987;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 178988146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178988218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9496;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 178988438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178988586 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.715;LDAF=0.0071;AVGPOST=0.9949;RSQ=0.7009;ERATE=0.0027;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 178988598 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.902;BRSQ=0.821;LDAF=0.4955;AVGPOST=0.8921;RSQ=0.8379;ERATE=0.0323;THETA=0.0002;AC=1106;AN=2184 GT:DS:GL:BD 0.50641024 1
1 178988825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.957;LDAF=0.0556;AVGPOST=0.9969;RSQ=0.9758;ERATE=0.0006;THETA=0.0004;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 178988849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.5041;AVGPOST=0.9971;RSQ=0.9957;ERATE=0.0006;THETA=0.0004;AC=1101;AN=2184 GT:DS:GL:BD 0.50412089 1
1 178988865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0055;AVGPOST=0.9958;RSQ=0.6914;ERATE=0.0018;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 178988867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0066;AVGPOST=0.9987;RSQ=0.9170;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 178988962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5209;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178989016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0090;AVGPOST=0.9989;RSQ=0.9434;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 178989064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5050;AVGPOST=0.9977;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=1102;AN=2184 GT:DS:GL:BD 0.50457877 1
1 178989260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.920;LDAF=0.0162;AVGPOST=0.9978;RSQ=0.9473;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 178989346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9444;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 178989398 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8890;ERATE=0.0009;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 178989424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0564;AVGPOST=0.9988;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 178989426 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8222;ERATE=0.0008;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178989464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3596;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 178989531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178989590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9311;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 178989725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7494;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178989756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178989853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5706;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178989883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7512;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178989889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.927;LDAF=0.0235;AVGPOST=0.9971;RSQ=0.9428;ERATE=0.0004;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 178989981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1643;AVGPOST=0.9980;RSQ=0.9935;ERATE=0.0004;THETA=0.0002;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 178990024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5994;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178990071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.633;LDAF=0.0043;AVGPOST=0.9956;RSQ=0.5499;ERATE=0.0016;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178990099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0366;AVGPOST=0.9984;RSQ=0.9817;ERATE=0.0004;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 178990121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.903;LDAF=0.0192;AVGPOST=0.9926;RSQ=0.8493;ERATE=0.0021;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 178990195 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178990211 . G GA 1441 PASS INDEL;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0168;AVGPOST=0.9974;RSQ=0.9362;ERATE=0.0005;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 178990343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0056;AVGPOST=0.9977;RSQ=0.8272;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 178990347 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178990412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.4908;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178990468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0155;AVGPOST=0.9989;RSQ=0.9694;ERATE=0.0005;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 178990496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5576;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178990678 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.318;LDAF=0.0016;AVGPOST=0.9973;RSQ=0.2576;ERATE=0.0008;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178990714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8852;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 178990883 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178990905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5749;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178991044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.874;LDAF=0.0308;AVGPOST=0.9898;RSQ=0.8693;ERATE=0.0009;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 178991058 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0043;AVGPOST=0.9966;RSQ=0.7072;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 178991094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9697;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 178991113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178991190 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7924;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178991199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8878;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 178991440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7938;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178991446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0140;AVGPOST=0.9982;RSQ=0.9536;ERATE=0.0006;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 178991455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1696;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 178991464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7387;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178991490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1454;AVGPOST=0.9990;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 178991492 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.576;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5654;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178991509 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.8035;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178991559 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0092;AVGPOST=0.9979;RSQ=0.9265;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 178991596 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.929;LDAF=0.1285;AVGPOST=0.9768;RSQ=0.9246;ERATE=0.0082;THETA=0.0004;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 178991598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.596;LDAF=0.0223;AVGPOST=0.9769;RSQ=0.5805;ERATE=0.0090;THETA=0.0031;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 178991603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.456;LDAF=0.0026;AVGPOST=0.9957;RSQ=0.4043;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178991610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.7600;AVGPOST=0.9899;RSQ=0.9806;ERATE=0.0016;THETA=0.0003;AC=1665;AN=2184 GT:DS:GL:BD 0.76236266 1
1 178991762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178991843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0209;AVGPOST=0.9994;RSQ=0.9922;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 178991887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.946;LDAF=0.0693;AVGPOST=0.9940;RSQ=0.9681;ERATE=0.0004;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 178991912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0547;AVGPOST=0.9992;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 178991948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178991956 . AC A 270 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9332;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 178992154 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3488;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 178992262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178992270 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178992531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 178992548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178992710 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0403;AVGPOST=0.9996;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 178993131 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8406;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 178993171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6259;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178993189 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7994;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178993195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9739;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 178993242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178993315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178993456 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0365;AVGPOST=0.9996;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 178993760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178994019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.9041;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 178994049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0051;AVGPOST=0.9972;RSQ=0.7816;ERATE=0.0007;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 178994139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0361;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 178994182 . AG A 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4512;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178994202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178994205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178994206 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6330;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178994251 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9289;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178994330 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178994534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1073;AVGPOST=0.9993;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 178994644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.7530;AVGPOST=0.9924;RSQ=0.9854;ERATE=0.0012;THETA=0.0002;AC=1647;AN=2184 GT:DS:GL:BD 0.75412089 1
1 178994690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6856;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178994764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0666;AVGPOST=0.9981;RSQ=0.9873;ERATE=0.0004;THETA=0.0006;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 178994785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4680;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178994851 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.592;LDAF=0.0073;AVGPOST=0.9926;RSQ=0.5825;ERATE=0.0007;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 178994886 . A AG 159 PASS INDEL;BAVGPOST=0.997;BRSQ=0.793;LDAF=0.0143;AVGPOST=0.9821;RSQ=0.4747;ERATE=0.0015;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 178994889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0221;AVGPOST=0.9898;RSQ=0.8162;ERATE=0.0010;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 178994980 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.251;LDAF=0.0133;AVGPOST=0.9784;RSQ=0.3468;ERATE=0.0018;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 178995283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.097;LDAF=0.1239;AVGPOST=0.8163;RSQ=0.3322;ERATE=0.0083;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 178995500 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.940;LDAF=0.3584;AVGPOST=0.9559;RSQ=0.9309;ERATE=0.0013;THETA=0.0004;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 178995521 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.931;LDAF=0.6877;AVGPOST=0.9753;RSQ=0.9583;ERATE=0.0020;THETA=0.0002;AC=1505;AN=2184 GT:DS:GL:BD 0.68910259 1
1 178995881 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.779;LDAF=0.0065;AVGPOST=0.9962;RSQ=0.7657;ERATE=0.0011;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 178995904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178996036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0045;AVGPOST=0.9972;RSQ=0.7661;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 178996083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9615;ERATE=0.0003;THETA=0.0028;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 178996089 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9670;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 178996309 . A AG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7564;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 178996316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7559;ERATE=0.0015;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178996344 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7645;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0006;THETA=0.0003;AC=1670;AN=2184 GT:DS:GL:BD 0.76465201 1
1 178996413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3521;AVGPOST=0.9938;RSQ=0.9904;ERATE=0.0013;THETA=0.0004;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 178996480 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178996652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178996679 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9184;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 178996793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0368;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0004;THETA=0.0002;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 178996881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1678;AVGPOST=0.9972;RSQ=0.9915;ERATE=0.0006;THETA=0.0002;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 178996898 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9995;RSQ=0.9698;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 178996910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178997021 . A AC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178997061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6346;ERATE=0.0004;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178997073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.941;LDAF=0.0513;AVGPOST=0.9972;RSQ=0.9759;ERATE=0.0005;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 178997093 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.906;LDAF=0.0150;AVGPOST=0.9991;RSQ=0.9730;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 178997159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3585;AVGPOST=0.9964;RSQ=0.9939;ERATE=0.0008;THETA=0.0005;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 178997175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7488;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178997178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6700;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178997193 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5218;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178997240 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.830;LDAF=0.0119;AVGPOST=0.9920;RSQ=0.7512;ERATE=0.0010;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 178997249 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9546;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 178997314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0130;AVGPOST=0.9969;RSQ=0.9106;ERATE=0.0004;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 178997370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5825;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178997472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.572;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4146;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178997485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.756;LDAF=0.0095;AVGPOST=0.9926;RSQ=0.6845;ERATE=0.0005;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 178997589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9553;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 178997612 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.4957;ERATE=0.0006;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178997684 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8818;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178997729 . AAAC A 1879 PASS INDEL;BAVGPOST=0.992;BRSQ=0.883;LDAF=0.0294;AVGPOST=0.9893;RSQ=0.8624;ERATE=0.0015;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 178997743 . ACAG A 13 PASS INDEL;BAVGPOST=0.994;BRSQ=0.816;LDAF=0.0359;AVGPOST=0.9745;RSQ=0.7003;ERATE=0.0013;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 178997783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0942;AVGPOST=0.9986;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 178997799 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178998012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7194;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178998035 . G GA 151 PASS INDEL;BAVGPOST=0.991;BRSQ=0.587;LDAF=0.0185;AVGPOST=0.9783;RSQ=0.5032;ERATE=0.0082;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 178998036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7538;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 178998047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8934;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178998149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178998416 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0067;AVGPOST=0.9991;RSQ=0.9435;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 178998446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6236;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178998549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6428;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178998642 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5658;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178998813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9327;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 178998830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0088;AVGPOST=0.9970;RSQ=0.8779;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 178998952 . G GT 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178999007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7294;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178999024 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178999104 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7381;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 178999107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6515;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 178999289 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9857;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 178999337 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 178999350 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7170;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 178999403 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178999448 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.804;LDAF=0.0083;AVGPOST=0.9950;RSQ=0.7528;ERATE=0.0020;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 178999474 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0067;AVGPOST=0.9950;RSQ=0.7155;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 178999566 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178999643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6365;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178999769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5235;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178999785 . CCT C 155 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178999885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5903;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 178999957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0207;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179000057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0160;AVGPOST=0.9989;RSQ=0.9710;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179000143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7569;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=1654;AN=2184 GT:DS:GL:BD 0.75732601 1
1 179000332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9365;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179000444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1612;AVGPOST=0.9980;RSQ=0.9947;ERATE=0.0004;THETA=0.0006;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 179000475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.953;LDAF=0.1217;AVGPOST=0.9927;RSQ=0.9752;ERATE=0.0006;THETA=0.0002;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 179000489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9040;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179000516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6700;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179000640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179000698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5607;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179000725 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1743;AVGPOST=0.9979;RSQ=0.9939;ERATE=0.0006;THETA=0.0002;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 179000833 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9222;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179000844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8275;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179000903 . GCTTAT G 8035 PASS INDEL;BAVGPOST=0.996;BRSQ=0.964;LDAF=0.0551;AVGPOST=0.9978;RSQ=0.9829;ERATE=0.0005;THETA=0.0002;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 179000980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179001314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6738;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179001338 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179001375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179001411 . G GCA 346 PASS INDEL;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6518;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179001440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4021;AVGPOST=0.9971;RSQ=0.9951;ERATE=0.0005;THETA=0.0003;AC=878;AN=2184 GT:DS:GL:BD 0.40201464 0
1 179001586 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179001597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9373;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179001641 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.939;LDAF=0.0290;AVGPOST=0.9986;RSQ=0.9796;ERATE=0.0003;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179001808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179001822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0092;AVGPOST=0.9992;RSQ=0.9659;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179001891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0076;AVGPOST=0.9989;RSQ=0.9382;ERATE=0.0003;THETA=0.0030;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179002032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179002133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0066;AVGPOST=0.9983;RSQ=0.9117;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179002216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0376;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 179002327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5936;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179002339 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5311;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179002593 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8567;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179002692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3635;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179002812 . ATTTC A 116 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4121;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179002863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0209;AVGPOST=0.9994;RSQ=0.9881;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179002969 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.965;LDAF=0.4461;AVGPOST=0.9720;RSQ=0.9583;ERATE=0.0043;THETA=0.0004;AC=976;AN=2184 GT:DS:GL:BD 0.44688645 0
1 179003141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179003248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0081;AVGPOST=0.9986;RSQ=0.9406;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179003321 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0069;AVGPOST=0.9975;RSQ=0.8430;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179003490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7646;AVGPOST=0.9951;RSQ=0.9901;ERATE=0.0017;THETA=0.0005;AC=1672;AN=2184 GT:DS:GL:BD 0.76556778 1
1 179003498 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6234;ERATE=0.0010;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179003597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.585;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179003766 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4800;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179003933 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179003961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179004170 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8257;ERATE=0.0006;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179004182 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0544;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 179004357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179004476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9860;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179004491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179004538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179004576 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8131;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179004602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0553;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0038;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 179004658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3536;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0005;THETA=0.0003;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 179004735 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179004778 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0386;AVGPOST=0.9986;RSQ=0.9874;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 179004803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179004846 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179004865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179004900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179004991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0178;AVGPOST=0.9984;RSQ=0.9631;ERATE=0.0004;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179005081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.940;LDAF=0.3411;AVGPOST=0.9814;RSQ=0.9702;ERATE=0.0012;THETA=0.0003;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 179005084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6118;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179005159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179005192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0039;AVGPOST=0.9983;RSQ=0.8020;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179005276 . A AG 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.7615;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179005298 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0071;AVGPOST=0.9989;RSQ=0.9365;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179005403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9373;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179005554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=0.9974;RSQ=0.6585;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179005555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179005619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9557;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179005660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7997;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179005690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179005697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9287;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179005918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9974;RSQ=0.8723;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179005931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179005970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7632;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0005;THETA=0.0003;AC=1667;AN=2184 GT:DS:GL:BD 0.76327837 1
1 179005977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8853;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179005979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179006013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179006106 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179006131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6119;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179006268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.2745;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179006353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5490;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179006383 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179006462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6931;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0004;THETA=0.0007;AC=1514;AN=2184 GT:DS:GL:BD 0.69322342 1
1 179006736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0042;AVGPOST=0.9944;RSQ=0.4660;ERATE=0.0012;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179006814 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0048;AVGPOST=0.9954;RSQ=0.6528;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179006901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.8976;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179007203 . GA G 815 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.9039;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179007277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4189;AVGPOST=0.9970;RSQ=0.9949;ERATE=0.0005;THETA=0.0004;AC=917;AN=2184 GT:DS:GL:BD 0.41987181 0
1 179007421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.5726;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179007461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0038;AVGPOST=0.9978;RSQ=0.7451;ERATE=0.0005;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179007492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9613;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179007558 . A AG 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.534;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179007576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9889;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179007577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179007840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1642;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 179007860 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179007895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9038;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179007943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179008100 . A AT 241 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6724;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179008278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9214;ERATE=0.0003;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179008325 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=0.9989;RSQ=0.9709;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179008366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179008385 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179008435 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179008437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8119;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179008445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.6602;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179008467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179008492 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7671;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179008517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1642;AVGPOST=0.9982;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 179008575 . CGTA C 119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4367;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179008652 . A AT 36 PASS INDEL;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0027;AVGPOST=0.9957;RSQ=0.3774;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179008703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4704;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179008747 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9402;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179008874 . A AT 1184 PASS INDEL;BAVGPOST=0.944;BRSQ=0.490;LDAF=0.0664;AVGPOST=0.9296;RSQ=0.5553;ERATE=0.0098;THETA=0.0025;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 179008875 . TTA T 8273 PASS INDEL;BAVGPOST=0.934;BRSQ=0.881;LDAF=0.3524;AVGPOST=0.9233;RSQ=0.8856;ERATE=0.0075;THETA=0.0002;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 179008876 . TA T 21503 PASS INDEL;BAVGPOST=0.936;BRSQ=0.893;LDAF=0.4008;AVGPOST=0.9678;RSQ=0.9549;ERATE=0.0005;THETA=0.0006;AC=890;AN=2184 GT:DS:GL:BD 0.40750915 0
1 179008878 . T TTTA 80 PASS INDEL;BAVGPOST=0.990;BRSQ=0.591;LDAF=0.0117;AVGPOST=0.9880;RSQ=0.6290;ERATE=0.0008;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179008910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.855;LDAF=0.0921;AVGPOST=0.9869;RSQ=0.9425;ERATE=0.0007;THETA=0.0006;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 179008935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.860;LDAF=0.4347;AVGPOST=0.9420;RSQ=0.9171;ERATE=0.0048;THETA=0.0004;AC=960;AN=2184 GT:DS:GL:BD 0.43956044 0
1 179009200 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9014;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179009240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0192;AVGPOST=0.9966;RSQ=0.9383;ERATE=0.0004;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179009288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7457;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179009409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.338;LDAF=0.0117;AVGPOST=0.9823;RSQ=0.4049;ERATE=0.0013;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179009645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.885;BRSQ=0.599;LDAF=0.1993;AVGPOST=0.8736;RSQ=0.6896;ERATE=0.0073;THETA=0.0020;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 179009666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.904;BRSQ=0.668;LDAF=0.2216;AVGPOST=0.8908;RSQ=0.7430;ERATE=0.0078;THETA=0.0002;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 179009825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.886;BRSQ=0.596;LDAF=0.2077;AVGPOST=0.8372;RSQ=0.6042;ERATE=0.0077;THETA=0.0010;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 179010077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.202;LDAF=0.0822;AVGPOST=0.8846;RSQ=0.3636;ERATE=0.0114;THETA=0.0022;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 179010083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.891;BRSQ=0.220;LDAF=0.1094;AVGPOST=0.8735;RSQ=0.4943;ERATE=0.0055;THETA=0.0005;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 179010099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.752;BRSQ=0.422;LDAF=0.2355;AVGPOST=0.8136;RSQ=0.6135;ERATE=0.0082;THETA=0.0004;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 179010116 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.780;BRSQ=0.357;LDAF=0.2066;AVGPOST=0.8497;RSQ=0.6812;ERATE=0.0023;THETA=0.0018;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 179010119 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.658;BRSQ=0.362;LDAF=0.3894;AVGPOST=0.7568;RSQ=0.6025;ERATE=0.0131;THETA=0.0005;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 179010239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.466;LDAF=0.0111;AVGPOST=0.9936;RSQ=0.7773;ERATE=0.0007;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179010243 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.445;LDAF=0.0837;AVGPOST=0.9045;RSQ=0.5146;ERATE=0.0096;THETA=0.0003;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 179010248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.437;LDAF=0.0754;AVGPOST=0.9172;RSQ=0.5339;ERATE=0.0071;THETA=0.0009;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 179010250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.284;LDAF=0.0045;AVGPOST=0.9951;RSQ=0.5777;ERATE=0.0005;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179010366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.446;LDAF=0.0094;AVGPOST=0.9855;RSQ=0.4551;ERATE=0.0011;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179010527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.683;LDAF=0.0210;AVGPOST=0.9846;RSQ=0.7055;ERATE=0.0009;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179010607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.882;LDAF=0.6968;AVGPOST=0.8747;RSQ=0.7969;ERATE=0.0092;THETA=0.0002;AC=1575;AN=2184 GT:DS:GL:BD 0.72115386 1
1 179010826 . AC A 4647 PASS INDEL;BAVGPOST=0.855;BRSQ=0.506;LDAF=0.2403;AVGPOST=0.7978;RSQ=0.5139;ERATE=0.0670;THETA=0.0005;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 179010946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0779;AVGPOST=0.9986;RSQ=0.9933;ERATE=0.0003;THETA=0.0002;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 179011062 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9386;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179011319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9734;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179011320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3731;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179011424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.755;LDAF=0.0121;AVGPOST=0.9972;RSQ=0.9086;ERATE=0.0005;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179011433 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0205;AVGPOST=0.9940;RSQ=0.9008;ERATE=0.0011;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179011479 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9785;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179011484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1726;AVGPOST=0.9984;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 179011532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0051;AVGPOST=0.9945;RSQ=0.5558;ERATE=0.0020;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179011615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179011651 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4032;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179011802 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179011876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.3115;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179011897 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0284;AVGPOST=0.9980;RSQ=0.9755;ERATE=0.0002;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179012095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0383;AVGPOST=0.9983;RSQ=0.9831;ERATE=0.0003;THETA=0.0006;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 179012189 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.584;LDAF=0.0045;AVGPOST=0.9941;RSQ=0.4796;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179012208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1739;AVGPOST=0.9977;RSQ=0.9932;ERATE=0.0005;THETA=0.0005;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 179012225 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1727;AVGPOST=0.9977;RSQ=0.9933;ERATE=0.0004;THETA=0.0008;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 179012311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179012328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5905;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179012442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5958;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179012491 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5808;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179012535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5316;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179012583 . CCCAGCTCCTT C 544 PASS INDEL;BAVGPOST=0.996;BRSQ=0.592;LDAF=0.0077;AVGPOST=0.9941;RSQ=0.7072;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179012602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9986;RSQ=0.9797;ERATE=0.0004;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 179012651 . C CG 149 PASS INDEL;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.4315;ERATE=0.0009;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179012659 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179012700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9691;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179012702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0518;AVGPOST=0.9966;RSQ=0.9740;ERATE=0.0003;THETA=0.0033;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 179012717 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9811;ERATE=0.0002;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179012762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179012771 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6736;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179012947 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1723;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0003;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 179012958 . CA C 84 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7077;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179013058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179013110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179013204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179013422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179013516 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179013519 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179013532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179013782 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179013974 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9763;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179013986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5572;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179014215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1734;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 179014270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179014285 . TTTTA T 116 PASS INDEL;BAVGPOST=0.994;BRSQ=0.675;LDAF=0.0300;AVGPOST=0.9623;RSQ=0.5024;ERATE=0.0068;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179014413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7202;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179014447 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179014643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179014657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7173;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179014796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.793;LDAF=0.0185;AVGPOST=0.9933;RSQ=0.8668;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179014805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0557;AVGPOST=0.9964;RSQ=0.9742;ERATE=0.0004;THETA=0.0004;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 179014806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0106;AVGPOST=0.9971;RSQ=0.9033;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179014958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179015247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179015289 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179015308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7447;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179015413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179015507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8718;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179015537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9982;RSQ=0.3092;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179015697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179015729 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1686;AVGPOST=0.9977;RSQ=0.9932;ERATE=0.0004;THETA=0.0005;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 179015842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6141;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179015903 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.635;LDAF=0.0069;AVGPOST=0.9920;RSQ=0.5698;ERATE=0.0007;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179015913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.624;LDAF=0.0059;AVGPOST=0.9915;RSQ=0.4629;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179015957 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.913;LDAF=0.0946;AVGPOST=0.9944;RSQ=0.9789;ERATE=0.0005;THETA=0.0004;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 179015995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5168;AVGPOST=0.9939;RSQ=0.9913;ERATE=0.0010;THETA=0.0001;AC=1131;AN=2184 GT:DS:GL:BD 0.51785713 1
1 179016002 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.705;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8145;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179016024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8776;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179016029 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5177;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179016062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9775;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179016086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5628;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179016201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6373;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179016289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179016316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179016330 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179016392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9982;RSQ=0.9784;ERATE=0.0002;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179016398 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4185;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0006;THETA=0.0003;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 179016483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1737;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0004;THETA=0.0005;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 179016557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179016611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0103;AVGPOST=0.9964;RSQ=0.8694;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179016647 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8394;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179016659 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179016667 . TGTGTCCA T 3949 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0175;AVGPOST=0.9989;RSQ=0.9766;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179016714 . G GT 82 PASS INDEL;BAVGPOST=0.995;BRSQ=0.443;LDAF=0.0097;AVGPOST=0.9878;RSQ=0.5231;ERATE=0.0015;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179016772 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0971;AVGPOST=0.9987;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 179016865 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8403;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179016880 . A AC 2451 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0167;AVGPOST=0.9995;RSQ=0.9850;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179016930 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0968;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0016;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 179016984 . T TG 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5863;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179017131 . G GT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4198;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179017163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179017187 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9412;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179017329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7205;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179017330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0108;AVGPOST=0.9996;RSQ=0.9891;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179017346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.7153;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179017376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179017426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5444;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179017502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9889;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179017515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.9019;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179017557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179017601 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0034;AVGPOST=0.9981;RSQ=0.8138;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179017642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179017644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179017696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.6151;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179017715 . G GC 75 PASS INDEL;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.6094;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179017812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6338;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179018270 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0099;AVGPOST=0.9995;RSQ=0.9733;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179018312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8122;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179018316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9303;ERATE=0.0004;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179018346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8858;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179018479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8401;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179018524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0076;AVGPOST=0.9989;RSQ=0.9419;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179018576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.945;LDAF=0.0351;AVGPOST=0.9975;RSQ=0.9728;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 179018577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.5645;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179018646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179018729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0087;AVGPOST=0.9970;RSQ=0.8925;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179018746 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.0992;AVGPOST=0.9944;RSQ=0.9789;ERATE=0.0009;THETA=0.0003;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 179018783 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4203;AVGPOST=0.9878;RSQ=0.9824;ERATE=0.0020;THETA=0.0004;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 179018842 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9855;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179018925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5176;AVGPOST=0.9955;RSQ=0.9938;ERATE=0.0005;THETA=0.0005;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 179018997 . A AT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4587;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179019019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4200;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0004;THETA=0.0004;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 179019186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2329;AVGPOST=0.9979;RSQ=0.9955;ERATE=0.0003;THETA=0.0008;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 179019238 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0969;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0012;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 179019349 . CT C 981 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0083;AVGPOST=0.9987;RSQ=0.9399;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179019366 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179019460 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179019519 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179019576 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0375;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 179019614 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179019660 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0002;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179019683 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179019688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179019728 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179019896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179019908 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6096;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179019974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9511;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179019983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6765;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179020021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8411;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179020188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.882;BRSQ=0.772;LDAF=0.3305;AVGPOST=0.9271;RSQ=0.8913;ERATE=0.0011;THETA=0.0002;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 179020190 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.840;BRSQ=0.756;LDAF=0.5668;AVGPOST=0.8634;RSQ=0.8269;ERATE=0.0072;THETA=0.0003;AC=1282;AN=2184 GT:DS:GL:BD 0.58699632 1
1 179020193 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.839;BRSQ=0.755;LDAF=0.5632;AVGPOST=0.8499;RSQ=0.8078;ERATE=0.0069;THETA=0.0003;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 179020283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5521;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179020377 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1706;AVGPOST=0.9941;RSQ=0.9850;ERATE=0.0004;THETA=0.0004;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 179020378 . TG T 144 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8026;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179020577 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0045;AVGPOST=0.9970;RSQ=0.7163;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179020656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4998;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179020694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.4620;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179020695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0176;AVGPOST=0.9965;RSQ=0.9179;ERATE=0.0006;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179020698 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0024;AVGPOST=0.9961;RSQ=0.3193;ERATE=0.0008;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179020803 . A AC 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3946;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179020975 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8599;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179021063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0121;AVGPOST=0.9949;RSQ=0.8253;ERATE=0.0005;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179021114 . AAAAG A 1476 PASS INDEL;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0088;AVGPOST=0.9976;RSQ=0.9003;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179021127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7012;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179021168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0153;AVGPOST=0.9996;RSQ=0.9906;ERATE=0.0002;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179021194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8711;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179021232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.6658;AVGPOST=0.9969;RSQ=0.9944;ERATE=0.0004;THETA=0.0005;AC=1455;AN=2184 GT:DS:GL:BD 0.66620880 1
1 179021258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0231;AVGPOST=0.9983;RSQ=0.9769;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 179021304 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.584;LDAF=0.0037;AVGPOST=0.9961;RSQ=0.5631;ERATE=0.0012;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179021328 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0039;AVGPOST=0.9970;RSQ=0.6959;ERATE=0.0008;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179021353 . CAT C 77 PASS INDEL;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8803;ERATE=0.0003;THETA=0.0032;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179021568 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4978;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179021577 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.6026;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179021592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6209;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179021651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0606;AVGPOST=0.9993;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 179021736 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4191;AVGPOST=0.9971;RSQ=0.9953;ERATE=0.0004;THETA=0.0032;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 179021746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4802;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0005;THETA=0.0004;AC=1048;AN=2184 GT:DS:GL:BD 0.47985348 0
1 179021778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4905;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179021811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5623;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179021917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179021951 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179021958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0607;AVGPOST=0.9993;RSQ=0.9956;ERATE=0.0002;THETA=0.0003;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 179021993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179022054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6059;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179022075 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0191;AVGPOST=0.9968;RSQ=0.9338;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179022081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.0378;AVGPOST=0.9991;RSQ=0.9907;ERATE=0.0002;THETA=0.0031;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 179022128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0002;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179022236 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2780;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0004;THETA=0.0002;AC=607;AN=2184 GT:DS:GL:BD 0.27793041 0
1 179022356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.8073;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179022367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0002;THETA=0.0001;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179022428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1818;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0006;THETA=0.0003;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 179022578 rs66615067 CCAAA C 33936 PASS INDEL;BAVGPOST=0.984;BRSQ=0.971;LDAF=0.4046;AVGPOST=0.9643;RSQ=0.9446;ERATE=0.0109;THETA=0.0004;AC=877;AN=2184 GT:DS:GL:BD 0.40155679 0
1 179022630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4193;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 179022650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6972;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=1523;AN=2184 GT:DS:GL:BD 0.69734430 1
1 179022682 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0076;AVGPOST=0.9983;RSQ=0.9246;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179022717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9923;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179022901 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7882;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179022933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7085;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179023068 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0165;AVGPOST=0.9995;RSQ=0.9873;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179023152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6940;AVGPOST=0.9945;RSQ=0.9905;ERATE=0.0007;THETA=0.0002;AC=1519;AN=2184 GT:DS:GL:BD 0.69551283 1
1 179023200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8470;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179023410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179023514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179023525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0454;AVGPOST=0.9991;RSQ=0.9919;ERATE=0.0002;THETA=0.0035;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 179023601 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1819;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 179023637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9360;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179023716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179023760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179023763 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179023814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9692;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179023828 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9847;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179023879 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3548;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=774;AN=2184 GT:DS:GL:BD 0.35439560 0
1 179024056 . CTATT C 153 PASS INDEL;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4451;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179024356 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0002;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179024493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9222;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179024507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179024553 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0594;AVGPOST=0.9985;RSQ=0.9881;ERATE=0.0003;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 179024603 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4357;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179024609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179024763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179024803 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179024823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179024885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7008;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=1530;AN=2184 GT:DS:GL:BD 0.70054942 1
1 179024969 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8381;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179025175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6660;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179025314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179025361 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179025369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0966;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0003;THETA=0.0001;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 179025449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9711;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179025469 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1732;AVGPOST=0.9988;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 179025478 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.8136;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179025605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179025673 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0165;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0002;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179025796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0065;AVGPOST=0.9978;RSQ=0.8813;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179025940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9448;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179026042 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179026071 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179026269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9911;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179026277 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9975;RSQ=0.8419;ERATE=0.0006;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179026388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6019;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179026473 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.0872;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179026489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.977;LDAF=0.6891;AVGPOST=0.9789;RSQ=0.9637;ERATE=0.0057;THETA=0.0002;AC=1515;AN=2184 GT:DS:GL:BD 0.69368130 1
1 179026527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4193;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 179026567 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7000;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=1528;AN=2184 GT:DS:GL:BD 0.69963372 1
1 179026670 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4223;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0007;THETA=0.0003;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 179026730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8801;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179026813 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9739;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179026897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179026960 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4219;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 179027074 . T TA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.5780;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179027140 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4220;AVGPOST=0.9958;RSQ=0.9939;ERATE=0.0006;THETA=0.0003;AC=923;AN=2184 GT:DS:GL:BD 0.42261904 0
1 179027339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179027352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0618;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 179027464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179027550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0354;AVGPOST=0.9984;RSQ=0.9850;ERATE=0.0002;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 179027782 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179027820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9302;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179027912 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9150;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179027971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179028092 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0366;AVGPOST=0.9997;RSQ=0.9959;ERATE=0.0002;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 179028138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8840;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179028242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179028335 . G GC 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4510;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179028446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1730;AVGPOST=0.9978;RSQ=0.9934;ERATE=0.0004;THETA=0.0004;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 179028490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8403;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179028663 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179028835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.928;LDAF=0.0404;AVGPOST=0.9963;RSQ=0.9617;ERATE=0.0004;THETA=0.0019;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 179028895 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.454;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5870;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179028936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.880;LDAF=0.6421;AVGPOST=0.9089;RSQ=0.8588;ERATE=0.0259;THETA=0.0003;AC=1438;AN=2184 GT:DS:GL:BD 0.65842491 1
1 179029125 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9996;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179029191 . TTAAC T 468 PASS INDEL;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8166;ERATE=0.0005;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179029217 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179029225 . A AAT 612 PASS INDEL;BAVGPOST=0.983;BRSQ=0.647;LDAF=0.0453;AVGPOST=0.9516;RSQ=0.5700;ERATE=0.0056;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179029234 . A AT 69 PASS INDEL;BAVGPOST=0.995;BRSQ=0.565;LDAF=0.0109;AVGPOST=0.9882;RSQ=0.5801;ERATE=0.0021;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179029236 rs77798643 A AT 38967 PASS INDEL;BAVGPOST=0.930;BRSQ=0.858;LDAF=0.7018;AVGPOST=0.8797;RSQ=0.7931;ERATE=0.0157;THETA=0.0004;AC=1529;AN=2184 GT:DS:GL:BD 0.70009160 1
1 179029237 rs60578014 T TA 4415 PASS INDEL;BAVGPOST=0.722;BRSQ=0.557;LDAF=0.4244;AVGPOST=0.7404;RSQ=0.6005;ERATE=0.0524;THETA=0.0005;AC=944;AN=2184 GT:DS:GL:BD 0.43223444 0
1 179029439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179029508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6689;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179029542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7911;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179029583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179029721 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0211;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0002;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179030000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179030067 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179030145 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179030146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0078;AVGPOST=0.9980;RSQ=0.8937;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179030301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8435;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179030325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1740;AVGPOST=0.9982;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 179030369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7697;AVGPOST=0.9979;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=1683;AN=2184 GT:DS:GL:BD 0.77060437 1
1 179030490 . A AT 152 PASS INDEL;BAVGPOST=0.986;BRSQ=0.518;LDAF=0.0284;AVGPOST=0.9640;RSQ=0.4984;ERATE=0.0090;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179030684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0975;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0002;THETA=0.0004;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 179030783 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=0.9989;RSQ=0.9777;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179030836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8574;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179030942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4277;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=934;AN=2184 GT:DS:GL:BD 0.42765567 0
1 179030948 . T TATA 188 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5843;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179031028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179031095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0801;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 179031195 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179031211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7906;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179031283 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179031289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0564;AVGPOST=0.9993;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 179031297 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9345;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179031305 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9746;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179031347 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0002;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179031380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179031383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.2593;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179031394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179031560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5658;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179031577 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4467;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179031613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0663;AVGPOST=0.9987;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 179031723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0095;AVGPOST=0.9984;RSQ=0.9301;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179031772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5714;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179031840 . A AT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5359;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179031869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7868;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179031887 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0614;AVGPOST=0.9979;RSQ=0.9858;ERATE=0.0004;THETA=0.0003;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 179031924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0002;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179031975 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5809;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179031992 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8096;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179032003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0158;AVGPOST=0.9991;RSQ=0.9765;ERATE=0.0002;THETA=0.0011;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179032083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4283;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=935;AN=2184 GT:DS:GL:BD 0.42811355 0
1 179032148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0071;AVGPOST=0.9978;RSQ=0.9016;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179032215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0363;AVGPOST=0.9985;RSQ=0.9845;ERATE=0.0004;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 179032253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179032266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179032318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0059;AVGPOST=0.9995;RSQ=0.9717;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179032341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9808;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179032352 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.924;LDAF=0.0217;AVGPOST=0.9982;RSQ=0.9678;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 179032390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4006;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179032411 . C CA 33 PASS INDEL;BAVGPOST=0.992;BRSQ=0.527;LDAF=0.0190;AVGPOST=0.9766;RSQ=0.5199;ERATE=0.0050;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179032583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0214;AVGPOST=0.9993;RSQ=0.9892;ERATE=0.0002;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179032614 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1726;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 179033021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179033126 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179033147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179033316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179033387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179033471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179033506 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179033571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179033598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179033622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179033763 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179033784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0609;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 179033800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179033847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5225;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179033987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6970;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=1522;AN=2184 GT:DS:GL:BD 0.69688642 1
1 179034229 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0611;AVGPOST=0.9992;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 179034268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8300;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179034269 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0036;AVGPOST=0.9966;RSQ=0.6664;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179034416 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9248;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179034481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1724;AVGPOST=0.9983;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 179034551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9589;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179034784 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1725;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 179034818 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179034908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179035051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9745;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179035143 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9668;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179035276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179035331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1728;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0002;THETA=0.0002;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 179035344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179035397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179035429 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1735;AVGPOST=0.9988;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 179035462 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7090;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=1549;AN=2184 GT:DS:GL:BD 0.70924908 1
1 179035513 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179035549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6453;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179035562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0047;AVGPOST=0.9985;RSQ=0.8693;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179035662 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0002;THETA=0.0012;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179035668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9260;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179035797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179035872 . CT C 141 PASS INDEL;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7140;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179036098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179036100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9510;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179036232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9368;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179036402 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179036597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179036638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6399;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179036672 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9864;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179036773 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.7893;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179036774 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.6963;AVGPOST=0.9834;RSQ=0.9721;ERATE=0.0021;THETA=0.0003;AC=1528;AN=2184 GT:DS:GL:BD 0.69963372 1
1 179036774 . T TA 4942 PASS INDEL;BAVGPOST=0.718;BRSQ=0.562;LDAF=0.5032;AVGPOST=0.7145;RSQ=0.5831;ERATE=0.0439;THETA=0.0002;AC=1166;AN=2184 GT:DS:GL:BD 0.53388280 1
1 179036831 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0168;AVGPOST=0.9993;RSQ=0.9817;ERATE=0.0003;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179036925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4279;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179036961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0028;AVGPOST=0.9954;RSQ=0.4273;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179036989 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7818;AVGPOST=0.9976;RSQ=0.9946;ERATE=0.0005;THETA=0.0004;AC=1708;AN=2184 GT:DS:GL:BD 0.78205127 1
1 179037118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.903;LDAF=0.8958;AVGPOST=0.9879;RSQ=0.9537;ERATE=0.0008;THETA=0.0002;AC=1959;AN=2184 GT:DS:GL:BD 0.89697802 1
1 179037178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1740;AVGPOST=0.9962;RSQ=0.9897;ERATE=0.0005;THETA=0.0002;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 179037188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8692;ERATE=0.0008;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179037220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8716;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179037223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179037466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0287;AVGPOST=0.9987;RSQ=0.9806;ERATE=0.0003;THETA=0.0002;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179037488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179037561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5001;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179037591 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.986;LDAF=0.4171;AVGPOST=0.9884;RSQ=0.9824;ERATE=0.0026;THETA=0.0002;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 179037671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.713;LDAF=0.0054;AVGPOST=0.9941;RSQ=0.6153;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179037803 . TTG T 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179038066 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179038115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179038155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1051;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 179038167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5576;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179038196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0002;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179038254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6347;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179038537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.970;LDAF=0.1644;AVGPOST=0.9937;RSQ=0.9808;ERATE=0.0005;THETA=0.0002;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 179038609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.965;LDAF=0.1704;AVGPOST=0.9929;RSQ=0.9816;ERATE=0.0007;THETA=0.0002;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 179038726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8925;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179038806 . C CT 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8186;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179039039 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.799;LDAF=0.0058;AVGPOST=0.9964;RSQ=0.7702;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179039043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0031;AVGPOST=0.9977;RSQ=0.7139;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179039044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.920;LDAF=0.4365;AVGPOST=0.9312;RSQ=0.9054;ERATE=0.0298;THETA=0.0002;AC=942;AN=2184 GT:DS:GL:BD 0.43131867 0
1 179039055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0652;AVGPOST=0.9980;RSQ=0.9874;ERATE=0.0005;THETA=0.0003;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 179039086 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.815;LDAF=0.0108;AVGPOST=0.9943;RSQ=0.8027;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179039132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6830;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179039189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0211;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179039219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.911;LDAF=0.0845;AVGPOST=0.9806;RSQ=0.9027;ERATE=0.0037;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 179039244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9632;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179039283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0276;AVGPOST=0.9939;RSQ=0.9140;ERATE=0.0006;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179039342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7720;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179039642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9991;RSQ=0.9726;ERATE=0.0003;THETA=0.0040;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179039693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.921;LDAF=0.6564;AVGPOST=0.8882;RSQ=0.8186;ERATE=0.0195;THETA=0.0004;AC=1478;AN=2184 GT:DS:GL:BD 0.67673993 1
1 179040051 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5367;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179040077 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7002;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=1530;AN=2184 GT:DS:GL:BD 0.70054942 1
1 179040158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.930;LDAF=0.7302;AVGPOST=0.9494;RSQ=0.9098;ERATE=0.0059;THETA=0.0003;AC=1623;AN=2184 GT:DS:GL:BD 0.74313188 1
1 179040211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.673;LDAF=0.0199;AVGPOST=0.9924;RSQ=0.8456;ERATE=0.0012;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179040253 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.848;BRSQ=0.729;LDAF=0.5791;AVGPOST=0.7665;RSQ=0.6414;ERATE=0.0330;THETA=0.0012;AC=1353;AN=2184 GT:DS:GL:BD 0.61950547 1
1 179040347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.402;LDAF=0.0027;AVGPOST=0.9953;RSQ=0.3557;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179040409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0090;AVGPOST=0.9953;RSQ=0.7812;ERATE=0.0007;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179040438 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.971;LDAF=0.4082;AVGPOST=0.9837;RSQ=0.9753;ERATE=0.0018;THETA=0.0003;AC=896;AN=2184 GT:DS:GL:BD 0.41025642 0
1 179040493 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179040540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0590;AVGPOST=0.9989;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 179040577 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179040646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6955;AVGPOST=0.9965;RSQ=0.9942;ERATE=0.0005;THETA=0.0002;AC=1520;AN=2184 GT:DS:GL:BD 0.69597071 1
1 179040669 . CAT C 29 PASS INDEL;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0051;AVGPOST=0.9959;RSQ=0.6611;ERATE=0.0006;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179040736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.7079;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179040758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179040768 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179040846 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0397;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0002;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 179040930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2853;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 179040968 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179041001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179041011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6960;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0002;AC=1520;AN=2184 GT:DS:GL:BD 0.69597071 1
1 179041031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179041082 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179041106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179041137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179041168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179041171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8873;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179041310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179041391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0558;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0002;THETA=0.0003;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 179041398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6960;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0001;AC=1520;AN=2184 GT:DS:GL:BD 0.69597071 1
1 179041652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0002;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179041653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179041709 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9167;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179041717 . T TA 232 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0028;AVGPOST=0.9964;RSQ=0.5049;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179041752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179041854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9910;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179041933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.7169;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179041970 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0993;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 179042090 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0187;AVGPOST=0.9991;RSQ=0.9816;ERATE=0.0002;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179042092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1686;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 179042227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5958;AVGPOST=0.9991;RSQ=0.9987;ERATE=0.0004;THETA=0.0004;AC=1301;AN=2184 GT:DS:GL:BD 0.59569597 1
1 179042270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0807;AVGPOST=0.9985;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 179042300 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4117;AVGPOST=0.9964;RSQ=0.9951;ERATE=0.0006;THETA=0.0004;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 179042301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.6940;ERATE=0.0009;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179042316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1688;AVGPOST=0.9985;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 179042436 . CCTT C 2741 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179042442 . TC T 113 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0209;AVGPOST=0.9947;RSQ=0.9059;ERATE=0.0004;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179042445 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7551;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179042450 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.4214;AVGPOST=0.9946;RSQ=0.9912;ERATE=0.0014;THETA=0.0012;AC=920;AN=2184 GT:DS:GL:BD 0.42124543 0
1 179042460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9019;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179042524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.849;LDAF=0.6943;AVGPOST=0.8871;RSQ=0.8130;ERATE=0.0221;THETA=0.0002;AC=1574;AN=2184 GT:DS:GL:BD 0.72069597 1
1 179042647 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8187;ERATE=0.0008;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179042748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.5164;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179042912 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0045;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179042962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7354;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179042974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5294;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179042981 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1684;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0002;THETA=0.0004;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 179043011 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179043018 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6718;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179043024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179043036 . T TG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5069;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179043051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4849;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179043125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179043180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6381;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179043253 . A AT 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5254;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179043333 . T TA 2754 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0169;AVGPOST=0.9991;RSQ=0.9768;ERATE=0.0004;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179043429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179043437 . G GT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5315;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179043489 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179043539 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6960;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0005;THETA=0.0008;AC=1520;AN=2184 GT:DS:GL:BD 0.69597071 1
1 179043553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1732;AVGPOST=0.9981;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 179043580 . A AT 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7597;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179043786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5797;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179043903 . T TAA 2274 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=0.9991;RSQ=0.9762;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179043939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0987;AVGPOST=0.9982;RSQ=0.9934;ERATE=0.0005;THETA=0.0004;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 179044048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9604;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179044162 . AC A 141 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8182;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179044200 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0067;AVGPOST=0.9976;RSQ=0.8626;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179044302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1661;AVGPOST=0.9958;RSQ=0.9882;ERATE=0.0005;THETA=0.0005;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 179044381 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7641;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179044455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5823;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179044572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179044671 . AAAAC A 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4671;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179044699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179044705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5490;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179044723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0596;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 179044803 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0073;AVGPOST=0.9967;RSQ=0.8073;ERATE=0.0007;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179044974 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.6347;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179045032 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179045107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179045167 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7957;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179045267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179045473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1717;AVGPOST=0.9987;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 179045482 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179045486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0059;AVGPOST=0.9979;RSQ=0.8882;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179045493 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179045500 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6838;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=1494;AN=2184 GT:DS:GL:BD 0.68406594 1
1 179045604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7124;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179045625 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7713;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179045775 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6188;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179045919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9995;RSQ=0.9859;ERATE=0.0003;THETA=0.0012;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179045961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1745;AVGPOST=0.9981;RSQ=0.9943;ERATE=0.0005;THETA=0.0008;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 179045997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0043;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179046006 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6301;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179046026 . CAA C 109 PASS INDEL;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8510;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179046103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9288;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179046137 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7921;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179046180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6945;AVGPOST=0.9955;RSQ=0.9920;ERATE=0.0009;THETA=0.0003;AC=1520;AN=2184 GT:DS:GL:BD 0.69597071 1
1 179046225 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1677;AVGPOST=0.9970;RSQ=0.9908;ERATE=0.0005;THETA=0.0005;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 179046311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0212;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179046354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.686;LDAF=0.0050;AVGPOST=0.9974;RSQ=0.7703;ERATE=0.0007;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179046372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0037;AVGPOST=0.9966;RSQ=0.6231;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179046439 rs60097150 G GA 1032 PASS INDEL;BAVGPOST=0.943;BRSQ=0.615;LDAF=0.1137;AVGPOST=0.8803;RSQ=0.5289;ERATE=0.0257;THETA=0.0002;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 179046473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3768;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179046526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0040;AVGPOST=0.9970;RSQ=0.7035;ERATE=0.0007;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179046538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4449;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179046547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4052;ERATE=0.0007;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179046553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0037;AVGPOST=0.9976;RSQ=0.7363;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179046578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.6903;AVGPOST=0.9915;RSQ=0.9849;ERATE=0.0010;THETA=0.0004;AC=1512;AN=2184 GT:DS:GL:BD 0.69230771 1
1 179046680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8536;ERATE=0.0003;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179046725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6699;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179046775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179046859 . C CTAA 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4390;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179047036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0002;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179047254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179047284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179047340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179047389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7652;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179047454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179047474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9904;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179047545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179047555 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9889;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179047609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179047638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6694;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179047692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.1673;AVGPOST=0.9968;RSQ=0.9908;ERATE=0.0003;THETA=0.0004;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 179047812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7335;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179047846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179047873 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179047963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1720;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 179048033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179048308 . CCTT C 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5242;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179048376 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5849;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179048423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6942;AVGPOST=0.9947;RSQ=0.9905;ERATE=0.0016;THETA=0.0044;AC=1516;AN=2184 GT:DS:GL:BD 0.69413918 1
1 179048487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9588;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179048535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9835;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179048618 . GGACT G 1015 PASS INDEL;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0099;AVGPOST=0.9964;RSQ=0.8773;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179048831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.886;LDAF=0.0287;AVGPOST=0.9857;RSQ=0.8301;ERATE=0.0012;THETA=0.0128;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 179048851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.764;LDAF=0.0510;AVGPOST=0.9689;RSQ=0.7560;ERATE=0.0050;THETA=0.0016;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 179048885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.388;LDAF=0.0136;AVGPOST=0.9795;RSQ=0.4125;ERATE=0.0022;THETA=0.0022;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179048909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.822;LDAF=0.1540;AVGPOST=0.9478;RSQ=0.8534;ERATE=0.0055;THETA=0.0005;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179049065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0414;AVGPOST=0.9989;RSQ=0.9889;ERATE=0.0003;THETA=0.0017;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179049184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.457;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7515;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179049254 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8734;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179049406 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.872;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8207;ERATE=0.0003;THETA=0.0112;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179049419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179049538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.965;LDAF=0.0688;AVGPOST=0.9848;RSQ=0.9096;ERATE=0.0028;THETA=0.0007;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 179049606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.974;LDAF=0.7404;AVGPOST=0.9878;RSQ=0.9772;ERATE=0.0011;THETA=0.0005;AC=1620;AN=2184 GT:DS:GL:BD 0.74175823 1
1 179049649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0032;AVGPOST=0.9961;RSQ=0.5049;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179049777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5161;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179049857 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9135;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179050002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9554;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179050222 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7322;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179050238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179050239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7360;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179050265 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0225;AVGPOST=0.9974;RSQ=0.9553;ERATE=0.0003;THETA=0.0022;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 179050352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8882;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179050436 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179050454 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9768;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179050478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1421;AVGPOST=0.9984;RSQ=0.9944;ERATE=0.0006;THETA=0.0024;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 179050522 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179050593 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1541;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 179050630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179050659 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5621;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179050747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179050755 . TCTC T 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5569;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179050854 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0207;AVGPOST=0.9996;RSQ=0.9933;ERATE=0.0002;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179050902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9581;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179050931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0116;AVGPOST=0.9985;RSQ=0.9504;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179050935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0608;AVGPOST=0.9988;RSQ=0.9919;ERATE=0.0003;THETA=0.0006;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 179050976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179051300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.7677;AVGPOST=0.9956;RSQ=0.9904;ERATE=0.0006;THETA=0.0005;AC=1679;AN=2184 GT:DS:GL:BD 0.76877290 1
1 179051309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.6157;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179051508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0100;AVGPOST=0.9983;RSQ=0.9312;ERATE=0.0003;THETA=0.0021;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179051699 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0092;AVGPOST=0.9962;RSQ=0.8383;ERATE=0.0006;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179051733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0719;AVGPOST=0.9946;RSQ=0.9685;ERATE=0.0005;THETA=0.0002;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 179051782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5265;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179051812 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7639;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179052002 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0767;AVGPOST=0.9992;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 179052006 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3871;AVGPOST=0.9903;RSQ=0.9870;ERATE=0.0077;THETA=0.0003;AC=843;AN=2184 GT:DS:GL:BD 0.38598901 0
1 179052008 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9614;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179052051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9999;RSQ=0.9891;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179052070 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179052079 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179052089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9682;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179052284 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5038;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179052590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.674;LDAF=0.0043;AVGPOST=0.9945;RSQ=0.4585;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179052603 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4819;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179052724 rs78979955 G GC 83 PASS INDEL;BAVGPOST=0.917;BRSQ=0.225;LDAF=0.1450;AVGPOST=0.8042;RSQ=0.3666;ERATE=0.0146;THETA=0.0006;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 179052734 . GC G 914 PASS INDEL;BAVGPOST=0.809;BRSQ=0.269;LDAF=0.2051;AVGPOST=0.7468;RSQ=0.3455;ERATE=0.0421;THETA=0.0007;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 179052771 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3918;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179052789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.6997;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179052934 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9997;RSQ=0.9938;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179053051 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4259;AVGPOST=0.9961;RSQ=0.9944;ERATE=0.0007;THETA=0.0006;AC=930;AN=2184 GT:DS:GL:BD 0.42582417 0
1 179053227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0229;AVGPOST=0.9990;RSQ=0.9830;ERATE=0.0003;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 179053240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179053278 . A AT 2227 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0191;AVGPOST=0.9976;RSQ=0.9506;ERATE=0.0002;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179053297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7455;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179053594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.854;LDAF=0.1549;AVGPOST=0.9892;RSQ=0.9674;ERATE=0.0011;THETA=0.0005;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 179053595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.406;LDAF=0.0462;AVGPOST=0.9369;RSQ=0.4326;ERATE=0.0067;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 179053601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9952;RSQ=0.8146;ERATE=0.0006;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179053619 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.863;LDAF=0.6074;AVGPOST=0.8675;RSQ=0.8074;ERATE=0.0164;THETA=0.0005;AC=1389;AN=2184 GT:DS:GL:BD 0.63598901 1
1 179053796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9672;ERATE=0.0009;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179053851 . CT C 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4365;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179053993 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0608;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0002;THETA=0.0005;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 179054169 . GAC G 111 PASS INDEL;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179054451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0044;AVGPOST=0.9986;RSQ=0.8582;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179054529 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9755;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179054593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179054625 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179054690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179054692 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6881;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0002;THETA=0.0004;AC=1503;AN=2184 GT:DS:GL:BD 0.68818682 1
1 179054850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179055020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1540;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0002;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 179055167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6943;ERATE=0.0021;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179055173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0154;AVGPOST=0.9996;RSQ=0.9899;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179055261 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3510;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 179055307 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179055377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9848;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179055476 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6182;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179055483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5678;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179055529 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9915;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179055654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5716;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179055661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.607;LDAF=0.0133;AVGPOST=0.9927;RSQ=0.7743;ERATE=0.0005;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179055693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.835;LDAF=0.0242;AVGPOST=0.9969;RSQ=0.9499;ERATE=0.0005;THETA=0.0020;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179055949 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1539;AVGPOST=0.9985;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 179055971 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179055978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179056099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0204;AVGPOST=0.9982;RSQ=0.9702;ERATE=0.0003;THETA=0.0009;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 179056139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9984;RSQ=0.9253;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179056315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8473;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179056375 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179056547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.819;LDAF=0.0098;AVGPOST=0.9959;RSQ=0.8506;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179056558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0838;AVGPOST=0.9991;RSQ=0.9948;ERATE=0.0004;THETA=0.0036;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 179056670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.9772;AVGPOST=0.9985;RSQ=0.9753;ERATE=0.0003;THETA=0.0017;AC=2134;AN=2184 GT:DS:GL:BD 0.97710621 1
1 179056683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6750;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179056791 . TC T 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7311;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179056979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0002;THETA=0.0027;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179057019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8795;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179057105 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179057108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179057117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179057159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9098;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179057170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179057230 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179057241 rs113249103 AAT A 669 PASS INDEL;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0083;AVGPOST=0.9993;RSQ=0.9614;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179057413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179057504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0845;AVGPOST=0.9986;RSQ=0.9929;ERATE=0.0004;THETA=0.0004;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 179057536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5410;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179057597 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0773;AVGPOST=0.9987;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 179057598 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8708;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179057694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6773;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179057737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8185;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179057766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179057820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8442;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179057824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0593;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0002;THETA=0.0017;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 179057937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179058010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0845;AVGPOST=0.9988;RSQ=0.9943;ERATE=0.0002;THETA=0.0008;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 179058085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0273;AVGPOST=0.9952;RSQ=0.9395;ERATE=0.0005;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179058112 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0071;AVGPOST=0.9975;RSQ=0.8968;ERATE=0.0002;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179058197 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6770;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179058221 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6314;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179058223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179058392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6321;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179058421 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0063;AVGPOST=0.9977;RSQ=0.8367;ERATE=0.0005;THETA=0.0073;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179058427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0187;AVGPOST=0.9982;RSQ=0.9627;ERATE=0.0004;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179058680 rs71758066 CAGTT C 7542 PASS INDEL;BAVGPOST=0.994;BRSQ=0.947;LDAF=0.0613;AVGPOST=0.9941;RSQ=0.9582;ERATE=0.0008;THETA=0.0025;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 179058699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179058722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179058813 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5980;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179058851 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9972;RSQ=0.7936;ERATE=0.0007;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179058875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.934;LDAF=0.0565;AVGPOST=0.9891;RSQ=0.9233;ERATE=0.0017;THETA=0.0002;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 179058892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.794;LDAF=0.0074;AVGPOST=0.9962;RSQ=0.8203;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179058994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7197;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179059055 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.790;LDAF=0.0044;AVGPOST=0.9987;RSQ=0.8878;ERATE=0.0003;THETA=0.0024;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179059080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7169;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179059095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4165;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179059127 . TTA T 523 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0126;AVGPOST=0.9909;RSQ=0.7420;ERATE=0.0011;THETA=0.0062;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179059246 rs72033620 TG T 495 PASS INDEL;BAVGPOST=0.631;BRSQ=0.136;LDAF=0.3133;AVGPOST=0.6390;RSQ=0.2827;ERATE=0.0410;THETA=0.0007;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 179059262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.680;LDAF=0.0764;AVGPOST=0.9290;RSQ=0.6284;ERATE=0.0053;THETA=0.0035;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 179059345 . AC A 2977 PASS INDEL;BAVGPOST=0.994;BRSQ=0.928;LDAF=0.0385;AVGPOST=0.9916;RSQ=0.9285;ERATE=0.0009;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 179059487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.922;LDAF=0.0416;AVGPOST=0.9886;RSQ=0.9019;ERATE=0.0016;THETA=0.0006;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 179059523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9302;ERATE=0.0002;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179059590 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8456;ERATE=0.0002;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179059687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.968;LDAF=0.0610;AVGPOST=0.9958;RSQ=0.9745;ERATE=0.0007;THETA=0.0070;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 179059706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0002;THETA=0.0033;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179059716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0183;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0002;THETA=0.0012;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179059734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7373;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179059822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3704;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179059823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0185;AVGPOST=0.9984;RSQ=0.9640;ERATE=0.0004;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179059842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4879;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179059950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.828;LDAF=0.0255;AVGPOST=0.9927;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179060054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0260;AVGPOST=0.9993;RSQ=0.9891;ERATE=0.0003;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179060106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7625;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179060116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3405;AVGPOST=0.9975;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 179060142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6008;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179060218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179060393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1354;AVGPOST=0.9973;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 179060399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5191;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179060415 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9998;RSQ=0.9875;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179060451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7757;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179060617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0640;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 179060645 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.523;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6070;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179060767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7915;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179060925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1416;AVGPOST=0.9977;RSQ=0.9918;ERATE=0.0003;THETA=0.0003;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 179060930 . C CCT 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5883;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179061068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7139;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179061069 . AAG A 2184 PASS INDEL;BAVGPOST=0.988;BRSQ=0.755;LDAF=0.0221;AVGPOST=0.9900;RSQ=0.8199;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179061108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3004;AVGPOST=0.9939;RSQ=0.9888;ERATE=0.0010;THETA=0.0009;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 179061154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179061213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6701;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179061219 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.6309;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179061261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179061289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3921;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179061314 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8449;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179061317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0956;AVGPOST=0.9994;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 179061427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6066;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=1324;AN=2184 GT:DS:GL:BD 0.60622710 1
1 179061444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8050;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179061507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179061617 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9178;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179061692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0054;AVGPOST=0.9976;RSQ=0.8637;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179061727 . CCTGTCATCCTAGCACT C 5603 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0184;AVGPOST=0.9996;RSQ=0.9906;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179061862 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1396;AVGPOST=0.9936;RSQ=0.9814;ERATE=0.0005;THETA=0.0006;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 179062067 . GA G 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7234;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179062133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179062155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9604;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179062285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6547;ERATE=0.0008;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179062286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0047;AVGPOST=0.9991;RSQ=0.9212;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179062295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.750;LDAF=0.0046;AVGPOST=0.9958;RSQ=0.6608;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179062350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7652;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179062398 . CA C 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7111;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179062458 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2240;AVGPOST=0.9979;RSQ=0.9952;ERATE=0.0005;THETA=0.0005;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 179062473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6380;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179062497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2248;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0003;THETA=0.0007;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 179062521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5924;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179062621 . G GT 591 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8668;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179062686 . TA T 117 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3135;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179062774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179062872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9876;ERATE=0.0002;THETA=0.0028;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179062889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9616;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179062942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0183;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0002;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179063034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179063092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179063112 . TC T 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4802;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179063123 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179063163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179063231 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179063302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179063537 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179063554 . ATAG A 279 PASS INDEL;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7427;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179063614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179063642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6249;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179063686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8691;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179063850 . G GA 86 PASS INDEL;BAVGPOST=0.991;BRSQ=0.580;LDAF=0.0145;AVGPOST=0.9824;RSQ=0.5088;ERATE=0.0040;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179063932 . GA G 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.7015;ERATE=0.0011;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179063943 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9582;ERATE=0.0002;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179064123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0011;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179064145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179064163 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0015;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179064164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179064200 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179064224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6049;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179064232 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.1293;AVGPOST=0.9948;RSQ=0.9779;ERATE=0.0843;THETA=0.0009;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 179064278 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179064279 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179064393 MERGED_DEL_2_6422 TAACAGGACCCTGGGACCTGTAGGAGCACCCCGTTTGGGACTGTGAGGTGTTTGAGGGTGTGGACTGGCATCCAGCAGCCACTAACAAACACACAACTGGTGTGTAAAAGGCAGGCCTTACATTAGAAGCCAAGCCAATCCTTTTTCTTTTTTTTGGAGGTCCCACCGAGATAGATAGGAACTTGGATTG T . . SV;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6624;ERATE=0.0004;THETA=0.0002;CIEND=-17,33;CIPOS=-18,19;END=179066699;HOMLEN=3;HOMSEQ=AAC;SOURCE=GenomeStrip_179064385_17906672 GT:DS:GL:BD 0.00091575 0
1 179064429 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179064480 . AAC A 508 PASS INDEL;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0048;AVGPOST=0.9970;RSQ=0.7538;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179064560 . G GAGAT 13668 PASS INDEL;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0686;AVGPOST=0.9941;RSQ=0.9610;ERATE=0.0022;THETA=0.0006;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 179064563 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179064568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179064723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6159;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179064756 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.538;LDAF=0.0205;AVGPOST=0.9729;RSQ=0.5018;ERATE=0.0068;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179064780 . G GTGTT 149 PASS INDEL;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7615;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179064875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.7596;AVGPOST=0.9946;RSQ=0.9894;ERATE=0.0009;THETA=0.0003;AC=1659;AN=2184 GT:DS:GL:BD 0.75961536 1
1 179064884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.8034;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179064956 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5750;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179064981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6669;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179065001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179065011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5927;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179065043 . A AG 55 PASS INDEL;BAVGPOST=0.968;BRSQ=0.076;LDAF=0.0664;AVGPOST=0.8968;RSQ=0.3748;ERATE=0.0057;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 179065046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0025;AVGPOST=0.9971;RSQ=0.5822;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179065049 . G GA 344 PASS INDEL;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6786;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179065125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.3616;AVGPOST=0.9935;RSQ=0.9888;ERATE=0.0004;THETA=0.0006;AC=792;AN=2184 GT:DS:GL:BD 0.36263737 0
1 179065140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179065145 . TTC T 555 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8726;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179065171 rs57616775 T TCAAA 20423 PASS INDEL;BAVGPOST=0.984;BRSQ=0.938;LDAF=0.1404;AVGPOST=0.9869;RSQ=0.9587;ERATE=0.0020;THETA=0.0008;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 179065217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179065233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0043;AVGPOST=0.9973;RSQ=0.7816;ERATE=0.0004;THETA=0.0028;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179065234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7239;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179065272 . C CTGTT 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7926;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179065299 . A AGCCAAGTCAT 409 PASS INDEL;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0032;AVGPOST=0.9965;RSQ=0.5521;ERATE=0.0007;THETA=0.0054;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179065346 . G GCT 56 PASS INDEL;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.9055;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179065351 . T TC 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8757;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179065390 . A AAAG 1410 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179065426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179065563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1218;AVGPOST=0.9950;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 179065590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179065670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.967;LDAF=0.0657;AVGPOST=0.9931;RSQ=0.9579;ERATE=0.0007;THETA=0.0015;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 179065678 . GC G 218 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179065679 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8931;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179065712 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9321;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179065797 rs112147849 C CTATT 34584 PASS INDEL;BAVGPOST=0.985;BRSQ=0.961;LDAF=0.2392;AVGPOST=0.9835;RSQ=0.9631;ERATE=0.0028;THETA=0.0077;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 179065838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6553;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179065870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0364;AVGPOST=0.9979;RSQ=0.9772;ERATE=0.0004;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 179065917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5337;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179065968 rs35251412 T TA 9240 PASS INDEL;BAVGPOST=0.950;BRSQ=0.811;LDAF=0.1434;AVGPOST=0.9450;RSQ=0.8414;ERATE=0.0116;THETA=0.0005;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 179065973 . A AT 129 PASS INDEL;BAVGPOST=0.936;BRSQ=0.072;LDAF=0.1061;AVGPOST=0.8458;RSQ=0.3691;ERATE=0.0080;THETA=0.0008;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 179065976 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179065983 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0075;AVGPOST=0.9977;RSQ=0.8963;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179066043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7268;ERATE=0.0008;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179066224 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8639;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179066273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0161;AVGPOST=0.9988;RSQ=0.9740;ERATE=0.0002;THETA=0.0087;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179066345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8393;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179066374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0039;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179066401 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5466;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179066538 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8244;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179066543 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5424;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179066554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179066619 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0005;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179066661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9598;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179066899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0187;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0043;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179066907 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0581;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0002;THETA=0.0019;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 179066922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179066943 . C CG 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6398;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179067071 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6362;AVGPOST=0.9943;RSQ=0.9906;ERATE=0.0006;THETA=0.0006;AC=1388;AN=2184 GT:DS:GL:BD 0.63553113 1
1 179067081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9289;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179067121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179067159 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0180;AVGPOST=0.9997;RSQ=0.9929;ERATE=0.0002;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179067185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0033;AVGPOST=0.9968;RSQ=0.6393;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179067207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8726;ERATE=0.0003;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179067321 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179067359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179067385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179067514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5411;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179067765 . A ATT 173 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8019;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179067893 . G GT 2824 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=0.9998;RSQ=0.9940;ERATE=0.0003;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179068084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7721;AVGPOST=0.9934;RSQ=0.9848;ERATE=0.0008;THETA=0.0002;AC=1691;AN=2184 GT:DS:GL:BD 0.77426738 1
1 179068175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9265;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179068305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0183;AVGPOST=0.9989;RSQ=0.9721;ERATE=0.0005;THETA=0.0013;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179068362 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6211;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179068374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7459;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179068454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179068464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6793;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179068519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179068520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179068608 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.8071;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179068623 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179068663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8552;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179068684 . C CT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179068851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5217;AVGPOST=0.9968;RSQ=0.9948;ERATE=0.0005;THETA=0.0004;AC=1137;AN=2184 GT:DS:GL:BD 0.52060437 1
1 179068862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179069097 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179069206 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0247;AVGPOST=0.9989;RSQ=0.9828;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179069302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179069367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179069429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6959;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=1520;AN=2184 GT:DS:GL:BD 0.69597071 1
1 179069452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179069545 . AAAC A 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.7065;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179069557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179069565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0046;AVGPOST=0.9983;RSQ=0.8794;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179069727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0166;AVGPOST=0.9987;RSQ=0.9701;ERATE=0.0004;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179069738 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6633;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179069816 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7396;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179069925 . TG T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5256;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179069967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8619;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179069979 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179070105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9476;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179070120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6341;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=1384;AN=2184 GT:DS:GL:BD 0.63369966 1
1 179070187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9989;RSQ=0.9711;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179070302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179070329 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179070334 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6329;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=1382;AN=2184 GT:DS:GL:BD 0.63278389 1
1 179070337 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179070361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179070449 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0049;AVGPOST=0.9986;RSQ=0.9089;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179070470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179070535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6293;ERATE=0.0010;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179070597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.628;LDAF=0.0041;AVGPOST=0.9971;RSQ=0.7278;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179070632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8586;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179070778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9155;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179070915 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0083;AVGPOST=0.9995;RSQ=0.9720;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179070937 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0187;AVGPOST=0.9968;RSQ=0.9388;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179071010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8622;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179071037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0591;AVGPOST=0.9992;RSQ=0.9931;ERATE=0.0004;THETA=0.0005;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 179071347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0094;AVGPOST=0.9951;RSQ=0.7854;ERATE=0.0006;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179071389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.656;LDAF=0.0192;AVGPOST=0.9869;RSQ=0.7384;ERATE=0.0006;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179071435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.514;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.5910;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179071436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.793;LDAF=0.0108;AVGPOST=0.9956;RSQ=0.8458;ERATE=0.0004;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179071554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179071715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6736;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179071730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6930;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179071756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6128;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=1337;AN=2184 GT:DS:GL:BD 0.61217946 1
1 179071783 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179071792 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8981;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179071865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6341;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=1385;AN=2184 GT:DS:GL:BD 0.63415754 1
1 179071869 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179071918 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7747;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=1693;AN=2184 GT:DS:GL:BD 0.77518314 1
1 179071926 . ACTTTT A 1467 PASS INDEL;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0092;AVGPOST=0.9976;RSQ=0.8860;ERATE=0.0023;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179071931 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.588;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9290;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179072074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6019;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179072112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5768;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179072121 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4938;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179072214 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8732;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179072258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9260;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179072273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5608;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179072295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179072319 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179072480 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7315;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179072481 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7159;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179072615 . AAAG A 1363 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9643;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179072624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9380;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179072632 . GGACT G 985 PASS INDEL;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9596;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179072728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.5188;AVGPOST=0.9920;RSQ=0.9880;ERATE=0.0016;THETA=0.0004;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 179072875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4523;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179072915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.5048;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179072966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6250;AVGPOST=0.9925;RSQ=0.9880;ERATE=0.0025;THETA=0.0005;AC=1366;AN=2184 GT:DS:GL:BD 0.62545788 1
1 179072984 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5143;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179073039 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.7745;AVGPOST=0.9970;RSQ=0.9936;ERATE=0.0003;THETA=0.0007;AC=1693;AN=2184 GT:DS:GL:BD 0.77518314 1
1 179073075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9687;ERATE=0.0004;THETA=0.0016;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179073086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179073111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6737;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179073210 . GGGA G 141 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5697;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179073327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179073366 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8601;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179073640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0070;AVGPOST=0.9993;RSQ=0.9536;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179073642 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9365;ERATE=0.0006;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179073689 . T TA 324 PASS INDEL;BAVGPOST=0.997;BRSQ=0.620;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7542;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179073729 . A AC 121 PASS INDEL;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7386;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179073799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.817;LDAF=0.0068;AVGPOST=0.9981;RSQ=0.8927;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179074034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179074259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6942;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179074260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0002;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179074274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9330;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179074336 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5567;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179074387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7865;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179074443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5598;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179074597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179074599 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0140;AVGPOST=0.9978;RSQ=0.9398;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179074634 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9208;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179074771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0059;AVGPOST=0.9994;RSQ=0.9514;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179074796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9811;ERATE=0.0002;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179074869 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5193;AVGPOST=0.9931;RSQ=0.9890;ERATE=0.0013;THETA=0.0012;AC=1134;AN=2184 GT:DS:GL:BD 0.51923078 1
1 179074967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6360;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179075085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5149;ERATE=0.0002;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179075112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9760;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179075285 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7754;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179075295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5274;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179075374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5345;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179075528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8348;ERATE=0.0006;THETA=0.0021;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179075550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0002;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179075624 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0056;AVGPOST=0.9990;RSQ=0.9361;ERATE=0.0002;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179075676 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6204;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179075719 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0093;AVGPOST=0.9979;RSQ=0.9199;ERATE=0.0002;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179075755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.975;LDAF=0.9080;AVGPOST=0.9925;RSQ=0.9666;ERATE=0.0008;THETA=0.0006;AC=1986;AN=2184 GT:DS:GL:BD 0.90934068 1
1 179075825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9425;ERATE=0.0003;THETA=0.0032;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179075915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7621;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179076084 . A AT 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5833;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179076164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8657;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179076497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7390;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179076554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179076588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9595;ERATE=0.0004;THETA=0.0017;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179076641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179076672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179076680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179076709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179076821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179076912 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179077024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179077109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179077111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0010;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179077148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179077223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179077246 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179077337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179077414 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179077415 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0026;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179077553 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8499;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179077558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0164;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0002;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179077566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179077575 . GA G 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6616;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179077586 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179077613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179077895 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179078052 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7868;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179078121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179078128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179078212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179078344 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179078345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179078441 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179078591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179078641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9997;RSQ=0.9782;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179078687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179078699 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0022;AVGPOST=0.9998;RSQ=0.9570;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179078756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179078882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4624;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179078932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9986;RSQ=0.8974;ERATE=0.0004;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179078933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9532;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179079144 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9449;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179079150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179079162 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0002;THETA=0.0058;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179079170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8664;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179079190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7640;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0002;THETA=0.0009;AC=1669;AN=2184 GT:DS:GL:BD 0.76419413 1
1 179079308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179079397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179079416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179079420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179079422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179079634 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179079650 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179079684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179079780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9732;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179079781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0002;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179079801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179079879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179079946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179079954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179079955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179080001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179080055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179080189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179080211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179080213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179080221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0975;AVGPOST=0.9973;RSQ=0.9866;ERATE=0.0008;THETA=0.0003;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 179080355 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0695;AVGPOST=0.9986;RSQ=0.9897;ERATE=0.0005;THETA=0.0007;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 179080416 . C CT 2308 PASS INDEL;BAVGPOST=0.538;BRSQ=0.219;LDAF=0.5224;AVGPOST=0.6548;RSQ=0.3896;ERATE=0.0338;THETA=0.0003;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 179080443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0190;AVGPOST=0.9992;RSQ=0.9833;ERATE=0.0003;THETA=0.0009;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179080514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0694;AVGPOST=0.9991;RSQ=0.9938;ERATE=0.0003;THETA=0.0002;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 179081047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.861;LDAF=0.0173;AVGPOST=0.9933;RSQ=0.8685;ERATE=0.0008;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179081051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0066;AVGPOST=0.9980;RSQ=0.8668;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179081085 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0386;AVGPOST=0.9982;RSQ=0.9791;ERATE=0.0006;THETA=0.0012;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 179081174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0048;AVGPOST=0.9958;RSQ=0.6680;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179081230 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7466;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179081261 rs28913880 TAA T 2618 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0188;AVGPOST=0.9976;RSQ=0.9448;ERATE=0.0004;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179081308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179081958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.5073;AVGPOST=0.9805;RSQ=0.9710;ERATE=0.0021;THETA=0.0009;AC=1110;AN=2184 GT:DS:GL:BD 0.50824177 1
1 179082154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4188;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179082194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5647;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179082251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179082258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179082377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0067;AVGPOST=0.9990;RSQ=0.9424;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179082395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6684;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179082501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6675;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179082525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6331;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=1384;AN=2184 GT:DS:GL:BD 0.63369966 1
1 179082620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7280;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179082659 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5713;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179082726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9614;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179082760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0443;AVGPOST=0.9961;RSQ=0.9652;ERATE=0.0003;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 179082830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0193;AVGPOST=0.9971;RSQ=0.9329;ERATE=0.0005;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179083000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.918;LDAF=0.6404;AVGPOST=0.8984;RSQ=0.8439;ERATE=0.0107;THETA=0.0004;AC=1437;AN=2184 GT:DS:GL:BD 0.65796703 1
1 179083001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.403;LDAF=0.0101;AVGPOST=0.9934;RSQ=0.7530;ERATE=0.0009;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179083068 . C CA 1917 PASS INDEL;BAVGPOST=0.943;BRSQ=0.901;LDAF=0.4642;AVGPOST=0.9154;RSQ=0.8758;ERATE=0.0067;THETA=0.0006;AC=1039;AN=2184 GT:DS:GL:BD 0.47573259 0
1 179083071 . A AAAAT 83 PASS INDEL;BAVGPOST=0.999;BRSQ=0.507;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5072;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179083074 rs58479421 A AT 22049 PASS INDEL;BAVGPOST=0.952;BRSQ=0.918;LDAF=0.4870;AVGPOST=0.9662;RSQ=0.9491;ERATE=0.0012;THETA=0.0003;AC=1076;AN=2184 GT:DS:GL:BD 0.49267399 0
1 179083137 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0063;AVGPOST=0.9963;RSQ=0.7552;ERATE=0.0010;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179083165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0196;AVGPOST=0.9937;RSQ=0.8745;ERATE=0.0009;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179083228 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0033;AVGPOST=0.9982;RSQ=0.7582;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179083336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6650;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179083394 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179083440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5019;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179083469 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6372;AVGPOST=0.9947;RSQ=0.9917;ERATE=0.0003;THETA=0.0009;AC=1394;AN=2184 GT:DS:GL:BD 0.63827837 1
1 179083485 rs67699478 GTGAGCCGAAATCACGTCAC G 53345 PASS INDEL;BAVGPOST=0.953;BRSQ=0.923;LDAF=0.5953;AVGPOST=0.9211;RSQ=0.8869;ERATE=0.0084;THETA=0.0015;AC=1334;AN=2184 GT:DS:GL:BD 0.61080587 1
1 179083596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8120;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179083665 rs11369185 A AC 72939 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6911;AVGPOST=0.9948;RSQ=0.9913;ERATE=0.0009;THETA=0.0007;AC=1513;AN=2184 GT:DS:GL:BD 0.69276559 1
1 179083742 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179083757 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179083828 . CT C 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179083927 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179083962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179084080 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0590;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 179084268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0451;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 179084297 rs28913874 CTT C 1219 PASS INDEL;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0090;AVGPOST=0.9983;RSQ=0.9165;ERATE=0.0004;THETA=0.0037;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179084360 . T TA 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179084398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7283;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179084408 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0590;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0002;THETA=0.0003;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 179084479 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5359;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179084480 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5869;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179084503 . AC A 255 PASS INDEL;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7807;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179084569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.8050;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179084616 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0245;AVGPOST=0.9994;RSQ=0.9920;ERATE=0.0002;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179084779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0806;AVGPOST=0.9951;RSQ=0.9764;ERATE=0.0003;THETA=0.0022;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 179084784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0133;AVGPOST=0.9988;RSQ=0.9627;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179084814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9982;RSQ=0.9031;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179084874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7046;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179084892 . G GA 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6021;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179084947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5611;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179084987 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9937;ERATE=0.0002;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179085109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9541;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179085128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0184;AVGPOST=0.9979;RSQ=0.9533;ERATE=0.0002;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179085130 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0168;AVGPOST=0.9994;RSQ=0.9861;ERATE=0.0002;THETA=0.0021;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179085143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179085285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.787;LDAF=0.0048;AVGPOST=0.9970;RSQ=0.7442;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179085306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0190;AVGPOST=0.9968;RSQ=0.9288;ERATE=0.0006;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179085337 rs33989390 CATCTCTACTACT C 67738 PASS INDEL;BAVGPOST=0.934;BRSQ=0.897;LDAF=0.4691;AVGPOST=0.8887;RSQ=0.8457;ERATE=0.0209;THETA=0.0006;AC=1055;AN=2184 GT:DS:GL:BD 0.48305860 0
1 179085434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4086;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179085559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179085624 . C CT 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0038;AVGPOST=0.9957;RSQ=0.5945;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179085700 rs35356594 C CA 30538 PASS INDEL;BAVGPOST=0.960;BRSQ=0.937;LDAF=0.5331;AVGPOST=0.9819;RSQ=0.9709;ERATE=0.0012;THETA=0.0005;AC=1176;AN=2184 GT:DS:GL:BD 0.53846157 1
1 179085723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6818;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179085799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.831;LDAF=0.0181;AVGPOST=0.9927;RSQ=0.8461;ERATE=0.0006;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179085889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4916;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179085907 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5083;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179086030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.547;LDAF=0.0037;AVGPOST=0.9960;RSQ=0.6005;ERATE=0.0007;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179086120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6889;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179086204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0002;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179086216 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9850;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179086221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179086245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179086317 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7584;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179086327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179086386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179086427 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179086735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179086765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179086797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8839;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179086803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179086815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179086920 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179087046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0056;AVGPOST=0.9983;RSQ=0.8872;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179087086 . T TA 181 PASS INDEL;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8793;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179087088 . C CA 991 PASS INDEL;BAVGPOST=0.943;BRSQ=0.560;LDAF=0.1104;AVGPOST=0.8863;RSQ=0.5221;ERATE=0.0369;THETA=0.0008;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 179087125 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0650;AVGPOST=0.9936;RSQ=0.9591;ERATE=0.0020;THETA=0.0045;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 179087145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0181;AVGPOST=0.9995;RSQ=0.9883;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179087180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179087209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0617;AVGPOST=0.9983;RSQ=0.9871;ERATE=0.0004;THETA=0.0007;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 179087389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9739;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179087447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9705;ERATE=0.0003;THETA=0.0021;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179087545 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9036;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179087585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179087633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179087862 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179087915 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179087925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179087934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6348;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1386;AN=2184 GT:DS:GL:BD 0.63461536 1
1 179088014 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179088103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9229;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179088118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8784;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179088221 rs10543577 TCTC T 46521 PASS INDEL;BAVGPOST=0.976;BRSQ=0.959;LDAF=0.5173;AVGPOST=0.9935;RSQ=0.9889;ERATE=0.0006;THETA=0.0003;AC=1131;AN=2184 GT:DS:GL:BD 0.51785713 1
1 179088228 . CTCA C 12352 PASS INDEL;BAVGPOST=0.975;BRSQ=0.956;LDAF=0.5170;AVGPOST=0.9667;RSQ=0.9481;ERATE=0.0060;THETA=0.0003;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 179088235 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179088255 . CA C 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5048;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179088459 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4103;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179088531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.909;LDAF=0.0224;AVGPOST=0.9952;RSQ=0.9138;ERATE=0.0007;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179088640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7462;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179088677 . A ACC 15 PASS INDEL;BAVGPOST=0.964;BRSQ=0.096;LDAF=0.0767;AVGPOST=0.8963;RSQ=0.4566;ERATE=0.0053;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179088683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9626;ERATE=0.0003;THETA=0.0001;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179088721 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.914;LDAF=0.5728;AVGPOST=0.9206;RSQ=0.8798;ERATE=0.0299;THETA=0.0005;AC=1265;AN=2184 GT:DS:GL:BD 0.57921243 1
1 179088744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.6366;AVGPOST=0.9959;RSQ=0.9932;ERATE=0.0005;THETA=0.0002;AC=1391;AN=2184 GT:DS:GL:BD 0.63690478 1
1 179088926 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0777;AVGPOST=0.9982;RSQ=0.9909;ERATE=0.0002;THETA=0.0008;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 179089029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0590;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0003;THETA=0.0006;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 179089127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9664;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179089213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6348;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=1386;AN=2184 GT:DS:GL:BD 0.63461536 1
1 179089292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0002;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179089357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179089448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179089475 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6348;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1386;AN=2184 GT:DS:GL:BD 0.63461536 1
1 179089491 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6348;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0008;AC=1386;AN=2184 GT:DS:GL:BD 0.63461536 1
1 179089518 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6230;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=1360;AN=2184 GT:DS:GL:BD 0.62271065 1
1 179089581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5198;AVGPOST=0.9970;RSQ=0.9956;ERATE=0.0005;THETA=0.0005;AC=1134;AN=2184 GT:DS:GL:BD 0.51923078 1
1 179089589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179089590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9861;ERATE=0.0002;THETA=0.0017;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179089749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.834;LDAF=0.0106;AVGPOST=0.9947;RSQ=0.8150;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179089966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.937;LDAF=0.0311;AVGPOST=0.9979;RSQ=0.9717;ERATE=0.0002;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 179090034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8361;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179090044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179090149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.4455;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179090159 rs5779008 TA T 71734 PASS INDEL;BAVGPOST=0.991;BRSQ=0.978;LDAF=0.7735;AVGPOST=0.9950;RSQ=0.9884;ERATE=0.0007;THETA=0.0029;AC=1690;AN=2184 GT:DS:GL:BD 0.77380955 1
1 179090161 . AT A 13087 PASS INDEL;BAVGPOST=0.959;BRSQ=0.908;LDAF=0.7310;AVGPOST=0.9327;RSQ=0.8814;ERATE=0.0117;THETA=0.0003;AC=1632;AN=2184 GT:DS:GL:BD 0.74725276 1
1 179090252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179090260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9438;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179090342 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179090353 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179090374 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0243;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0002;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179090490 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179090497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179090735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179090751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179090774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179090814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179091016 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179091020 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179091107 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179091147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0011;AVGPOST=0.9982;RSQ=0.3360;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179091161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.780;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8548;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179091334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179091431 . A AG 367 PASS INDEL;BAVGPOST=0.993;BRSQ=0.705;LDAF=0.0146;AVGPOST=0.9896;RSQ=0.7023;ERATE=0.0005;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179091565 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9286;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179091671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5553;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179091951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.981;LDAF=0.5382;AVGPOST=0.9861;RSQ=0.9783;ERATE=0.0027;THETA=0.0004;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 179092026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0036;AVGPOST=0.9966;RSQ=0.6567;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179092087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5184;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179092132 . C CA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4876;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179092310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179092315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6911;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179092612 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.935;LDAF=0.6262;AVGPOST=0.9777;RSQ=0.9657;ERATE=0.0005;THETA=0.0005;AC=1385;AN=2184 GT:DS:GL:BD 0.63415754 1
1 179092613 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.934;LDAF=0.6233;AVGPOST=0.9730;RSQ=0.9585;ERATE=0.0013;THETA=0.0004;AC=1379;AN=2184 GT:DS:GL:BD 0.63141024 1
1 179092741 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7728;AVGPOST=0.9978;RSQ=0.9949;ERATE=0.0003;THETA=0.0022;AC=1689;AN=2184 GT:DS:GL:BD 0.77335167 1
1 179092942 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=0.9991;RSQ=0.9735;ERATE=0.0003;THETA=0.0015;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179092969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5116;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179093071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.956;LDAF=0.0493;AVGPOST=0.9910;RSQ=0.9248;ERATE=0.0009;THETA=0.0010;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 179093103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8669;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179093216 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0610;AVGPOST=0.9956;RSQ=0.9677;ERATE=0.0008;THETA=0.0007;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 179093325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0105;AVGPOST=0.9945;RSQ=0.8051;ERATE=0.0007;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179093331 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0104;AVGPOST=0.9954;RSQ=0.8061;ERATE=0.0006;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179093350 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.847;BRSQ=0.516;LDAF=0.8224;AVGPOST=0.8481;RSQ=0.5997;ERATE=0.0189;THETA=0.0010;AC=1885;AN=2184 GT:DS:GL:BD 0.86309522 1
1 179093458 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9356;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179093522 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8202;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179093634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.853;LDAF=0.0293;AVGPOST=0.9850;RSQ=0.7909;ERATE=0.0015;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179093738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.5300;AVGPOST=0.9679;RSQ=0.9521;ERATE=0.0074;THETA=0.0009;AC=1161;AN=2184 GT:DS:GL:BD 0.53159338 1
1 179093750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0034;AVGPOST=0.9972;RSQ=0.6834;ERATE=0.0009;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179093784 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6836;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179094015 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179094085 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.7069;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179094269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8972;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179094375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179094383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0075;AVGPOST=0.9982;RSQ=0.9172;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179094438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5470;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179094550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179094612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7385;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179094632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179094634 . CTT C 255 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179094668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0051;AVGPOST=0.9993;RSQ=0.9427;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179094826 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179094839 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7929;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179094843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.6362;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0005;THETA=0.0003;AC=1390;AN=2184 GT:DS:GL:BD 0.63644689 1
1 179094882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179094909 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179094963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7583;ERATE=0.0008;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179095050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6671;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179095148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8498;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179095277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179095317 . G GT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4175;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179095379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179095400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179095449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179095494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179095548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179095865 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179095928 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179095940 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0044;AVGPOST=0.9976;RSQ=0.7805;ERATE=0.0013;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179096040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9765;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179096088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7727;AVGPOST=0.9978;RSQ=0.9955;ERATE=0.0004;THETA=0.0002;AC=1689;AN=2184 GT:DS:GL:BD 0.77335167 1
1 179096173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8721;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179096183 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0113;AVGPOST=0.9969;RSQ=0.8983;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179096237 . A AG 82 PASS INDEL;BAVGPOST=0.998;BRSQ=0.425;LDAF=0.0037;AVGPOST=0.9962;RSQ=0.6282;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179096344 . C CA 104 PASS INDEL;BAVGPOST=0.981;BRSQ=0.562;LDAF=0.0391;AVGPOST=0.9561;RSQ=0.5439;ERATE=0.0106;THETA=0.0043;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179096384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179096411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179096519 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9234;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179096562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7056;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179096585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9907;ERATE=0.0002;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179096787 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179096889 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0168;AVGPOST=0.9991;RSQ=0.9820;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179096958 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.830;LDAF=0.0128;AVGPOST=0.9952;RSQ=0.8437;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179097033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5595;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179097048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7384;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179097093 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9992;RSQ=0.9789;ERATE=0.0004;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179097123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8555;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179097141 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.666;LDAF=0.0058;AVGPOST=0.9968;RSQ=0.7747;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179097205 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179097206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3635;AVGPOST=0.9947;RSQ=0.9913;ERATE=0.0006;THETA=0.0004;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 179097282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4958;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179097295 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4794;AVGPOST=0.9952;RSQ=0.9925;ERATE=0.0007;THETA=0.0010;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 179097421 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6865;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179097574 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9432;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179097673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179097696 . TC T 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0032;AVGPOST=0.9956;RSQ=0.4769;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179097798 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0075;AVGPOST=0.9994;RSQ=0.9680;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179097807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0003;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179097896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8185;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179097994 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.560;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4744;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179098084 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0577;AVGPOST=0.9959;RSQ=0.9669;ERATE=0.0003;THETA=0.0004;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 179098130 . T TA 212 PASS INDEL;BAVGPOST=0.963;BRSQ=0.490;LDAF=0.0658;AVGPOST=0.9126;RSQ=0.4396;ERATE=0.0146;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 179098131 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.812;LDAF=0.0118;AVGPOST=0.9963;RSQ=0.8756;ERATE=0.0006;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179098319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0019;AVGPOST=0.9964;RSQ=0.2506;ERATE=0.0005;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179098475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3620;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0003;THETA=0.0008;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 179098558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0182;AVGPOST=0.9991;RSQ=0.9768;ERATE=0.0004;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179098595 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179098633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.382;LDAF=0.9857;AVGPOST=0.9789;RSQ=0.4245;ERATE=0.0038;THETA=0.0005;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 179098677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0035;AVGPOST=0.9952;RSQ=0.4764;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179098757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0041;AVGPOST=0.9966;RSQ=0.6297;ERATE=0.0012;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179098770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.957;LDAF=0.3564;AVGPOST=0.9857;RSQ=0.9763;ERATE=0.0018;THETA=0.0004;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 179098915 . T TA 5261 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0002;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179099021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3670;AVGPOST=0.9969;RSQ=0.9948;ERATE=0.0005;THETA=0.0003;AC=801;AN=2184 GT:DS:GL:BD 0.36675823 0
1 179099032 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7295;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179099083 rs11451321 G GT 1516 PASS INDEL;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0159;AVGPOST=0.9992;RSQ=0.9797;ERATE=0.0002;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179099170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0171;AVGPOST=0.9984;RSQ=0.9671;ERATE=0.0003;THETA=0.0029;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179099256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179099456 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179099567 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179099642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179099688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5830;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179099786 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0155;AVGPOST=0.9992;RSQ=0.9781;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179099796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0142;AVGPOST=0.9989;RSQ=0.9641;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179099911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0168;AVGPOST=0.9920;RSQ=0.8249;ERATE=0.0006;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179100013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9185;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179100032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6524;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179100045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3613;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=789;AN=2184 GT:DS:GL:BD 0.36126372 0
1 179100121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.3078;AVGPOST=0.9935;RSQ=0.9883;ERATE=0.0008;THETA=0.0006;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 179100201 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0173;AVGPOST=0.9987;RSQ=0.9691;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179100217 . AG A 847 PASS INDEL;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0105;AVGPOST=0.9978;RSQ=0.9286;ERATE=0.0005;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179100291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.4718;AVGPOST=0.9869;RSQ=0.9812;ERATE=0.0029;THETA=0.0006;AC=1036;AN=2184 GT:DS:GL:BD 0.47435898 0
1 179100369 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0075;AVGPOST=0.9985;RSQ=0.9139;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179100421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179100441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179100530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179100531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179100604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179100663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179100710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0589;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0002;THETA=0.0005;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 179100725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0002;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179100772 . T TG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5764;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179100802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0372;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 179100857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7918;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179100869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0254;AVGPOST=0.9995;RSQ=0.9926;ERATE=0.0002;THETA=0.0038;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179100905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179100948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9163;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179101245 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0040;AVGPOST=0.9971;RSQ=0.7002;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179101295 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7142;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179101374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4941;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179101430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7914;ERATE=0.0005;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179101510 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.718;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7611;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179101517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179101530 . AAC A 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4898;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179101606 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3583;AVGPOST=0.9957;RSQ=0.9937;ERATE=0.0003;THETA=0.0010;AC=781;AN=2184 GT:DS:GL:BD 0.35760072 0
1 179101660 rs71655768 GATT G 1696 PASS INDEL;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0211;AVGPOST=0.9935;RSQ=0.8910;ERATE=0.0010;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179101734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0147;AVGPOST=0.9970;RSQ=0.9140;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179101794 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.722;LDAF=0.0065;AVGPOST=0.9925;RSQ=0.5291;ERATE=0.0009;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179101922 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0051;AVGPOST=0.9982;RSQ=0.8363;ERATE=0.0005;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179101989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.793;LDAF=0.0089;AVGPOST=0.9973;RSQ=0.8748;ERATE=0.0005;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179102023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0171;AVGPOST=0.9976;RSQ=0.9515;ERATE=0.0004;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179102143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179102268 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0611;AVGPOST=0.9991;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 179102272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0002;THETA=0.0016;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179102395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179102657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179102765 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0193;AVGPOST=0.9998;RSQ=0.9948;ERATE=0.0002;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179102817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179102859 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6249;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179102908 . A AC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7623;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179102983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7813;ERATE=0.0003;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179103076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8778;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179103173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179103278 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0175;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179103283 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7060;ERATE=0.0002;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179103599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9544;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179103687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.3595;AVGPOST=0.9913;RSQ=0.9858;ERATE=0.0009;THETA=0.0005;AC=787;AN=2184 GT:DS:GL:BD 0.36034799 0
1 179103701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.3231;AVGPOST=0.9898;RSQ=0.9829;ERATE=0.0006;THETA=0.0035;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 179103834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.969;LDAF=0.1324;AVGPOST=0.9856;RSQ=0.9505;ERATE=0.0004;THETA=0.0007;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 179103845 rs74981541 GCCTCTC G 12738 PASS INDEL;BAVGPOST=0.901;BRSQ=0.810;LDAF=0.3425;AVGPOST=0.8831;RSQ=0.8123;ERATE=0.0171;THETA=0.0005;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 179103873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.854;LDAF=0.0321;AVGPOST=0.9807;RSQ=0.7786;ERATE=0.0042;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179103876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0183;AVGPOST=0.9989;RSQ=0.9711;ERATE=0.0005;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179103877 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.930;LDAF=0.3536;AVGPOST=0.9713;RSQ=0.9532;ERATE=0.0048;THETA=0.0006;AC=779;AN=2184 GT:DS:GL:BD 0.35668498 0
1 179103951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0029;AVGPOST=0.9954;RSQ=0.3074;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179103983 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.741;LDAF=0.0107;AVGPOST=0.9941;RSQ=0.7915;ERATE=0.0004;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179104078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.763;LDAF=0.0335;AVGPOST=0.9940;RSQ=0.9286;ERATE=0.0005;THETA=0.0009;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 179104118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.892;LDAF=0.0714;AVGPOST=0.9840;RSQ=0.9015;ERATE=0.0016;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 179104205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.873;LDAF=0.3546;AVGPOST=0.9831;RSQ=0.9718;ERATE=0.0011;THETA=0.0006;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 179104393 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.908;LDAF=0.0167;AVGPOST=0.9963;RSQ=0.9011;ERATE=0.0006;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179104704 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.737;BRSQ=0.473;LDAF=0.3397;AVGPOST=0.7952;RSQ=0.6506;ERATE=0.0154;THETA=0.0009;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 179104781 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.113;LDAF=0.0320;AVGPOST=0.9464;RSQ=0.3606;ERATE=0.0027;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179105002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.799;BRSQ=0.541;LDAF=0.3358;AVGPOST=0.7698;RSQ=0.5566;ERATE=0.0263;THETA=0.0003;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 179105090 . G GT 220 PASS INDEL;BAVGPOST=0.857;BRSQ=0.079;LDAF=0.1902;AVGPOST=0.7338;RSQ=0.3115;ERATE=0.0194;THETA=0.0003;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 179105110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.804;BRSQ=0.617;LDAF=0.3315;AVGPOST=0.8471;RSQ=0.7295;ERATE=0.0103;THETA=0.0004;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 179105226 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.872;LDAF=0.0667;AVGPOST=0.9396;RSQ=0.6496;ERATE=0.0025;THETA=0.0005;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 179105544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0244;AVGPOST=0.9959;RSQ=0.9315;ERATE=0.0008;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 179105553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0378;AVGPOST=0.9970;RSQ=0.9682;ERATE=0.0005;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 179105849 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0737;AVGPOST=0.9913;RSQ=0.9460;ERATE=0.0009;THETA=0.0005;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 179105958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.529;LDAF=0.0051;AVGPOST=0.9932;RSQ=0.5190;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179105978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7142;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179106008 rs35212331 C CG 4153 PASS INDEL;BAVGPOST=0.962;BRSQ=0.647;LDAF=0.0465;AVGPOST=0.9773;RSQ=0.8213;ERATE=0.0003;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 179106099 rs113330918 G GAA 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3870;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179106159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0029;AVGPOST=0.9967;RSQ=0.5490;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179106290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.839;LDAF=0.0094;AVGPOST=0.9957;RSQ=0.8307;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179106349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5953;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179106562 . AAT A 52 PASS INDEL;BAVGPOST=0.983;BRSQ=0.447;LDAF=0.0434;AVGPOST=0.9377;RSQ=0.4298;ERATE=0.0094;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179106747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0312;AVGPOST=0.9964;RSQ=0.9603;ERATE=0.0005;THETA=0.0007;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 179106795 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6802;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179106853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0778;AVGPOST=0.9993;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 179106899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3653;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 179106973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0778;AVGPOST=0.9992;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 179106974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5335;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179107115 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4414;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179107125 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9141;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179107179 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7023;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179107272 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179107430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3575;AVGPOST=0.9953;RSQ=0.9917;ERATE=0.0005;THETA=0.0002;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 179107483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0180;AVGPOST=0.9987;RSQ=0.9770;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179107504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.6977;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179107521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8269;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179107524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0158;AVGPOST=0.9992;RSQ=0.9785;ERATE=0.0003;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179107656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179107735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8102;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179108081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.938;LDAF=0.3767;AVGPOST=0.9298;RSQ=0.8845;ERATE=0.0109;THETA=0.0004;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 179108169 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0067;AVGPOST=0.9920;RSQ=0.5401;ERATE=0.0007;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179108254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0205;AVGPOST=0.9938;RSQ=0.8945;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179108296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8750;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179108350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.916;LDAF=0.4558;AVGPOST=0.9417;RSQ=0.9184;ERATE=0.0126;THETA=0.0003;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 179108475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179108491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.5850;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179108515 . GAAGGAAGAA G 306 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.6932;ERATE=0.0006;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179108566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0372;AVGPOST=0.9994;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 179108710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179108812 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0063;AVGPOST=0.9925;RSQ=0.5750;ERATE=0.0010;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179108930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6668;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179108960 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4607;AVGPOST=0.9978;RSQ=0.9962;ERATE=0.0004;THETA=0.0006;AC=1007;AN=2184 GT:DS:GL:BD 0.46108058 0
1 179108967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.3389;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179108991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7477;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179109012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0097;AVGPOST=0.9978;RSQ=0.9230;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179109041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9317;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179109069 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179109195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179109250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9989;RSQ=0.9781;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179109510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9709;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179109519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179109560 . ATTTAT A 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6564;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179109587 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0176;AVGPOST=0.9994;RSQ=0.9860;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179109596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179109633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8316;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179109651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5742;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179109780 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179109793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179109832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.5211;ERATE=0.0002;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179109908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179109940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9755;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179109987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0256;AVGPOST=0.9991;RSQ=0.9877;ERATE=0.0002;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179110120 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0784;AVGPOST=0.9980;RSQ=0.9889;ERATE=0.0004;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 179110190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0563;AVGPOST=0.9962;RSQ=0.9682;ERATE=0.0005;THETA=0.0004;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 179110193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7980;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179110227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6414;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179110351 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.7179;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179110388 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179110407 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8261;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179110439 . AATTAG A 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7743;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179110472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8707;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179110641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0173;AVGPOST=0.9997;RSQ=0.9922;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179110770 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179111003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0074;AVGPOST=0.9992;RSQ=0.9511;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179111060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3614;AVGPOST=0.9945;RSQ=0.9912;ERATE=0.0007;THETA=0.0003;AC=789;AN=2184 GT:DS:GL:BD 0.36126372 0
1 179111325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8351;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179111408 . T TA 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0047;AVGPOST=0.9968;RSQ=0.7132;ERATE=0.0004;THETA=0.0027;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179111409 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0060;AVGPOST=0.9994;RSQ=0.9621;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179111423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.606;LDAF=0.0051;AVGPOST=0.9962;RSQ=0.6910;ERATE=0.0006;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179111479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9496;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179111490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9653;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179111758 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5235;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179111850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9592;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179111876 . CCATA C 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6711;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179112113 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7104;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179112145 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0696;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0002;THETA=0.0004;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 179112168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179112209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179112216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179112267 . AT A 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6787;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179112313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179112435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3624;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=793;AN=2184 GT:DS:GL:BD 0.36309522 0
1 179112470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.0768;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179112542 . TAG T 435 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7454;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179112577 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0045;AVGPOST=0.9962;RSQ=0.6685;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179112818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0189;AVGPOST=0.9974;RSQ=0.9522;ERATE=0.0005;THETA=0.0009;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179112863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.533;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8712;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179112894 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.913;LDAF=0.0186;AVGPOST=0.9991;RSQ=0.9781;ERATE=0.0004;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179112923 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.953;LDAF=0.4662;AVGPOST=0.9330;RSQ=0.9010;ERATE=0.0127;THETA=0.0006;AC=1030;AN=2184 GT:DS:GL:BD 0.47161171 0
1 179112934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0049;AVGPOST=0.9945;RSQ=0.5619;ERATE=0.0007;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179112988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0031;AVGPOST=0.9964;RSQ=0.5184;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179112989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.629;LDAF=0.0058;AVGPOST=0.9970;RSQ=0.7809;ERATE=0.0006;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179113123 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0093;AVGPOST=0.9978;RSQ=0.9198;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179113171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.761;LDAF=0.0062;AVGPOST=0.9979;RSQ=0.8522;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179113307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0797;AVGPOST=0.9956;RSQ=0.9775;ERATE=0.0006;THETA=0.0002;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 179113316 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0698;AVGPOST=0.9979;RSQ=0.9873;ERATE=0.0005;THETA=0.0002;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 179113326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.485;LDAF=0.0041;AVGPOST=0.9937;RSQ=0.3548;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179113331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0059;AVGPOST=0.9948;RSQ=0.6143;ERATE=0.0008;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179113340 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1032;AVGPOST=0.9960;RSQ=0.9836;ERATE=0.0005;THETA=0.0010;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 179113357 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0109;AVGPOST=0.9948;RSQ=0.8401;ERATE=0.0007;THETA=0.0013;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179113369 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.925;LDAF=0.3551;AVGPOST=0.9691;RSQ=0.9500;ERATE=0.0034;THETA=0.0003;AC=781;AN=2184 GT:DS:GL:BD 0.35760072 0
1 179113453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0033;AVGPOST=0.9954;RSQ=0.4382;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179113487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.443;LDAF=0.0046;AVGPOST=0.9931;RSQ=0.3890;ERATE=0.0009;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179113508 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.909;LDAF=0.3432;AVGPOST=0.9638;RSQ=0.9388;ERATE=0.0028;THETA=0.0002;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 179113573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.540;LDAF=0.0057;AVGPOST=0.9910;RSQ=0.3866;ERATE=0.0014;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179113582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0028;AVGPOST=0.9954;RSQ=0.3351;ERATE=0.0010;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179113674 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7962;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179113818 rs35286494 AATT A 28584 PASS INDEL;BAVGPOST=0.975;BRSQ=0.951;LDAF=0.3001;AVGPOST=0.9831;RSQ=0.9721;ERATE=0.0008;THETA=0.0004;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 179113823 . TTAA T 6429 PASS INDEL;BAVGPOST=0.973;BRSQ=0.948;LDAF=0.2983;AVGPOST=0.9872;RSQ=0.9777;ERATE=0.0006;THETA=0.0006;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 179114056 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0074;AVGPOST=0.9979;RSQ=0.8884;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179114091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8903;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179114200 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.436;LDAF=0.0076;AVGPOST=0.9898;RSQ=0.4639;ERATE=0.0032;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179114228 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0640;AVGPOST=0.9984;RSQ=0.9893;ERATE=0.0004;THETA=0.0004;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 179114398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0118;AVGPOST=0.9988;RSQ=0.9619;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179114492 . TTTTG T 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3976;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179114656 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0099;AVGPOST=0.9962;RSQ=0.8710;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179114689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8005;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179114711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179114803 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0594;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0006;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 179114820 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9995;RSQ=0.9445;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179114884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8282;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179115009 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9783;ERATE=0.0002;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179115054 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0166;AVGPOST=0.9968;RSQ=0.9286;ERATE=0.0003;THETA=0.0040;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179115186 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6794;ERATE=0.0003;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179115204 . A AT 37 PASS INDEL;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0034;AVGPOST=0.9975;RSQ=0.6737;ERATE=0.0006;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179115295 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6765;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179115336 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179115340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7573;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179115350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9187;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179115407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179115485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3594;AVGPOST=0.9908;RSQ=0.9847;ERATE=0.0024;THETA=0.0002;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 179115496 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179115750 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179115858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7837;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179115952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9531;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179115964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6367;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179116095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0040;AVGPOST=0.9980;RSQ=0.8449;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179116213 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4613;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179116234 . AACAG A 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9797;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179116393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8789;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179116449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6970;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179116463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7489;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179116474 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3588;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0004;THETA=0.0005;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 179116495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8957;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179116554 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9178;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179116585 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179116668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179116672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6580;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179116706 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179116784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4811;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0004;THETA=0.0016;AC=1051;AN=2184 GT:DS:GL:BD 0.48122710 0
1 179116795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.3762;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179116928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0009;AVGPOST=0.9982;RSQ=0.3103;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179117002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4811;AVGPOST=0.9960;RSQ=0.9937;ERATE=0.0009;THETA=0.0003;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 179117079 . TG T 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5013;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179117101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4811;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=1052;AN=2184 GT:DS:GL:BD 0.48168498 0
1 179117361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7760;ERATE=0.0003;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179117414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5265;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179117453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0181;AVGPOST=0.9994;RSQ=0.9839;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179117478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6096;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179117586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179117627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5023;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179117631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4994;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179117640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5792;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179117666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9866;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179117740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3571;AVGPOST=0.9959;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=781;AN=2184 GT:DS:GL:BD 0.35760072 0
1 179117864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7621;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179117980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7998;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179117983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0172;AVGPOST=0.9961;RSQ=0.9138;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179117984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0048;AVGPOST=0.9947;RSQ=0.6035;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179118158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9156;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179118207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179118223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8899;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179118348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179118462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0002;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179118561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179118730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7388;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179118758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9202;AVGPOST=0.9953;RSQ=0.9779;ERATE=0.0003;THETA=0.0023;AC=2009;AN=2184 GT:DS:GL:BD 0.91987181 1
1 179118802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8116;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179118910 . T TA 140 PASS INDEL;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5515;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179118930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179118956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7729;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179118962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7847;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179119148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0068;AVGPOST=0.9973;RSQ=0.8546;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179119179 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5320;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179119201 . T TA 725 PASS INDEL;BAVGPOST=0.986;BRSQ=0.763;LDAF=0.0378;AVGPOST=0.9665;RSQ=0.6563;ERATE=0.0043;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179119244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0181;AVGPOST=0.9995;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179119281 . G GGACT 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179119362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0174;AVGPOST=0.9979;RSQ=0.9568;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179119635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7780;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179119696 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0936;AVGPOST=0.9994;RSQ=0.9971;ERATE=0.0002;THETA=0.0005;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 179119766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.5226;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179119964 . TTG T 1371 PASS INDEL;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9443;ERATE=0.0003;THETA=0.0026;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179119968 rs74678974 CTTATT C 9162 PASS INDEL;BAVGPOST=0.996;BRSQ=0.974;LDAF=0.0766;AVGPOST=0.9983;RSQ=0.9902;ERATE=0.0003;THETA=0.0005;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 179119994 . CCCCAACTT C 389 PASS INDEL;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0036;AVGPOST=0.9970;RSQ=0.6622;ERATE=0.0005;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179120008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8696;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179120044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8214;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179120082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6783;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179120307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7113;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179120543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6211;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179120601 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5070;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179120742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8209;ERATE=0.0005;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179120795 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2921;AVGPOST=0.9975;RSQ=0.9950;ERATE=0.0004;THETA=0.0002;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 179120849 . AAATTT A 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0030;AVGPOST=0.9979;RSQ=0.6881;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179121077 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8504;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179121098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9287;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179121200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0167;AVGPOST=0.9968;RSQ=0.9338;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179121246 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179121280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1330;AVGPOST=0.9988;RSQ=0.9963;ERATE=0.0002;THETA=0.0005;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 179121340 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179121389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.896;LDAF=0.0083;AVGPOST=0.9967;RSQ=0.8433;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179121664 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5943;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179121698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7968;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179121731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179121741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179121817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7258;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179121980 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7552;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179122013 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5817;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179122145 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4522;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179122225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6660;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179122259 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0158;AVGPOST=0.9995;RSQ=0.9857;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179122263 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9548;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179122280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8075;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179122308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9834;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179122309 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179122459 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0465;AVGPOST=0.9990;RSQ=0.9912;ERATE=0.0002;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 179122503 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9270;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179122725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4570;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0006;THETA=0.0009;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 179122779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3617;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0002;THETA=0.0006;AC=790;AN=2184 GT:DS:GL:BD 0.36172161 0
1 179122990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.890;LDAF=0.0189;AVGPOST=0.9941;RSQ=0.8699;ERATE=0.0003;THETA=0.0009;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179123001 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179123069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.688;LDAF=0.0236;AVGPOST=0.9773;RSQ=0.6534;ERATE=0.0069;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179123074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6197;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179123178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9592;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179123183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179123303 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6907;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179123314 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9010;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179123524 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.6354;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179124025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0022;AVGPOST=0.9999;RSQ=0.9736;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179124107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8553;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179124267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0052;AVGPOST=0.9992;RSQ=0.9348;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179124290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179124330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6178;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179124349 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5847;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179124390 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7801;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179124402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7837;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179124411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0783;AVGPOST=0.9993;RSQ=0.9953;ERATE=0.0004;THETA=0.0008;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 179124423 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0437;AVGPOST=0.9984;RSQ=0.9833;ERATE=0.0002;THETA=0.0006;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 179124436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6142;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179124437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7293;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179124473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9447;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179124507 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6413;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179124529 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179124737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.975;LDAF=0.1397;AVGPOST=0.9926;RSQ=0.9759;ERATE=0.0010;THETA=0.0008;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 179124798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.8030;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179124855 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0062;AVGPOST=0.9979;RSQ=0.8619;ERATE=0.0003;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179124860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.755;LDAF=0.0067;AVGPOST=0.9954;RSQ=0.7438;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179124933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8804;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179125052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7295;ERATE=0.0006;THETA=0.0030;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179125141 . TTA T 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5418;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179125165 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9632;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179125169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0025;AVGPOST=0.9958;RSQ=0.3277;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179125274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179125276 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179125301 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7174;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179125415 . CAAAG C 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179125419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6366;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179125429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6333;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179125451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9995;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 179125460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0002;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179125510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7798;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179125541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8374;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179125662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7643;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179125712 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8598;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179125730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8478;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179125831 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.9130;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179125970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4644;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179126107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8828;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179126139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8702;ERATE=0.0004;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179126152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6643;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179126549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0194;AVGPOST=0.9987;RSQ=0.9775;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179126707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9048;ERATE=0.0015;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179126737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9255;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179126750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0046;AVGPOST=0.9979;RSQ=0.8111;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179126827 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0442;AVGPOST=0.9978;RSQ=0.9762;ERATE=0.0004;THETA=0.0006;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 179126840 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7712;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179126904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6576;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179126975 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9557;ERATE=0.0002;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179127027 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0218;AVGPOST=0.9987;RSQ=0.9783;ERATE=0.0003;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 179127101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0002;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179127174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179127183 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6603;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179127335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9991;RSQ=0.9555;ERATE=0.0003;THETA=0.0014;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179127451 . AC A 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6594;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179127557 . G GT 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4815;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179127587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.8116;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179127656 . A AC 135 PASS INDEL;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.6080;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179127663 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7258;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179127691 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179127692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179127738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0036;AVGPOST=0.9976;RSQ=0.7501;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179127799 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6474;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179127847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179127867 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5372;ERATE=0.0002;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179127878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9088;ERATE=0.0002;THETA=0.0037;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179127944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0058;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179128022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179128141 . GTTATA G 166 PASS INDEL;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5048;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179128193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4339;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179128355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6689;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179128375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9322;ERATE=0.0004;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179128398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179128471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6252;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179128713 . G GT 255 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6484;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179128779 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8671;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179128854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0092;AVGPOST=0.9961;RSQ=0.8422;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179128895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.844;LDAF=0.0104;AVGPOST=0.9976;RSQ=0.9011;ERATE=0.0004;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179128973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6045;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179129011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5095;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179129015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6891;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179129064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0125;AVGPOST=0.9969;RSQ=0.9072;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179129065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.654;LDAF=0.0283;AVGPOST=0.9688;RSQ=0.5564;ERATE=0.0089;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 179129124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5877;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179129174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0055;AVGPOST=0.9957;RSQ=0.6971;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179129409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0750;AVGPOST=0.9980;RSQ=0.9864;ERATE=0.0004;THETA=0.0007;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 179129467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0029;AVGPOST=0.9974;RSQ=0.6089;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179129473 rs35118807 A AC 13532 PASS INDEL;BAVGPOST=0.974;BRSQ=0.940;LDAF=0.2234;AVGPOST=0.9805;RSQ=0.9565;ERATE=0.0017;THETA=0.0005;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 179129517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.3555;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179129549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7028;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179129558 . TC T 346 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0057;AVGPOST=0.9955;RSQ=0.7272;ERATE=0.0005;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179129582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.607;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.7477;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179129620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.5396;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179129666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0148;AVGPOST=0.9987;RSQ=0.9635;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179129714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.3472;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179129789 . TA T 107 PASS INDEL;BAVGPOST=0.986;BRSQ=0.904;LDAF=0.0718;AVGPOST=0.9959;RSQ=0.9745;ERATE=0.0005;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 179129794 rs113897904 AT A 6673 PASS INDEL;BAVGPOST=0.992;BRSQ=0.947;LDAF=0.0720;AVGPOST=0.9961;RSQ=0.9757;ERATE=0.0004;THETA=0.0006;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 179129835 . AC A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7222;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179129856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0151;AVGPOST=0.9989;RSQ=0.9703;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179130019 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5263;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179130153 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8065;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179130304 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179130334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179130359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1624;AVGPOST=0.9925;RSQ=0.9777;ERATE=0.0004;THETA=0.0003;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 179130446 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5809;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179130562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9041;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179130596 . TAA T 20 PASS INDEL;BAVGPOST=0.998;BRSQ=0.715;LDAF=0.0096;AVGPOST=0.9881;RSQ=0.5456;ERATE=0.0013;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179130656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0159;AVGPOST=0.9987;RSQ=0.9658;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179130669 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9367;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179130771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179130821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179130906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179130909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179130948 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179131068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7648;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179131075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8355;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179131139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7153;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179131144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7166;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179131170 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179131296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6423;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179131349 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179131517 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0180;AVGPOST=0.9996;RSQ=0.9894;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179131593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0409;AVGPOST=0.9983;RSQ=0.9802;ERATE=0.0005;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 179131615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0059;AVGPOST=0.9981;RSQ=0.8651;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179131635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0191;AVGPOST=0.9989;RSQ=0.9738;ERATE=0.0003;THETA=0.0009;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179131646 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0406;AVGPOST=0.9990;RSQ=0.9889;ERATE=0.0003;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 179131668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5984;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179131710 . ACT A 2149 PASS INDEL;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0142;AVGPOST=0.9989;RSQ=0.9669;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179131715 . G GT 805 PASS INDEL;BAVGPOST=0.896;BRSQ=0.675;LDAF=0.1553;AVGPOST=0.9102;RSQ=0.7765;ERATE=0.0009;THETA=0.0003;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 179131720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9993;RSQ=0.9608;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179131721 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.947;LDAF=0.2198;AVGPOST=0.9901;RSQ=0.9796;ERATE=0.0006;THETA=0.0003;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 179132097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0759;AVGPOST=0.9979;RSQ=0.9870;ERATE=0.0003;THETA=0.0002;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179132182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5835;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179132340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7565;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179132512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8566;ERATE=0.0002;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179132708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2197;AVGPOST=0.9936;RSQ=0.9856;ERATE=0.0005;THETA=0.0010;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 179132755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0075;AVGPOST=0.9896;RSQ=0.5133;ERATE=0.0007;THETA=0.0063;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179132814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0052;AVGPOST=0.9975;RSQ=0.8073;ERATE=0.0004;THETA=0.0020;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179132819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9987;RSQ=0.9183;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179132867 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7380;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179133029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179133107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179133180 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179133221 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3668;AVGPOST=0.9970;RSQ=0.9950;ERATE=0.0004;THETA=0.0002;AC=801;AN=2184 GT:DS:GL:BD 0.36675823 0
1 179133353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0787;AVGPOST=0.9991;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 179133441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9678;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179133450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0427;AVGPOST=0.9995;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 179133483 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9107;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179133647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179133697 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179133728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6211;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179133748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0252;AVGPOST=0.9987;RSQ=0.9827;ERATE=0.0003;THETA=0.0012;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179133997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0133;AVGPOST=0.9978;RSQ=0.9285;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179134025 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9624;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179134180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6474;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179134287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.9041;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179134392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9177;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179134433 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5060;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179134507 . AG A 451 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9584;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179134554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.901;LDAF=0.0139;AVGPOST=0.9951;RSQ=0.8716;ERATE=0.0005;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179134757 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179134775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9768;ERATE=0.0002;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179134786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9101;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179134952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.5182;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179134953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.503;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3973;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179134994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1606;AVGPOST=0.9921;RSQ=0.9764;ERATE=0.0004;THETA=0.0004;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 179135120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0813;AVGPOST=0.9976;RSQ=0.9865;ERATE=0.0004;THETA=0.0002;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 179135220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.794;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8770;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179135331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0149;AVGPOST=0.9961;RSQ=0.9046;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179135486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4803;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179135640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7361;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179135835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.823;LDAF=0.0729;AVGPOST=0.9888;RSQ=0.9414;ERATE=0.0005;THETA=0.0007;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 179135986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4670;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179136239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179136269 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3604;AVGPOST=0.9972;RSQ=0.9949;ERATE=0.0005;THETA=0.0004;AC=789;AN=2184 GT:DS:GL:BD 0.36126372 0
1 179136461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4275;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179136542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179136723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0175;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0002;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179136756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6681;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179136762 . ACT A 164 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8044;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179136868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5106;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179136997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5602;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179137050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6524;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179137115 . AAAAC A 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3592;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179137138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0786;AVGPOST=0.9990;RSQ=0.9937;ERATE=0.0004;THETA=0.0010;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 179137238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8265;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179137532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8582;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179137644 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8359;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179137795 . GCA G 105 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179137806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6837;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179137815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5096;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179137849 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4865;AVGPOST=0.9955;RSQ=0.9927;ERATE=0.0009;THETA=0.0004;AC=1064;AN=2184 GT:DS:GL:BD 0.48717949 0
1 179137970 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179138007 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5535;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179138077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9988;RSQ=0.9325;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179138171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8563;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179138283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4573;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179138406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5690;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179138509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0081;AVGPOST=0.9989;RSQ=0.9334;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179138556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.947;LDAF=0.4569;AVGPOST=0.9506;RSQ=0.9255;ERATE=0.0059;THETA=0.0004;AC=1013;AN=2184 GT:DS:GL:BD 0.46382785 0
1 179138590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0065;AVGPOST=0.9899;RSQ=0.4403;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179138608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.2272;AVGPOST=0.9931;RSQ=0.9860;ERATE=0.0007;THETA=0.0005;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 179138636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0083;AVGPOST=0.9946;RSQ=0.7832;ERATE=0.0007;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179138652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.976;LDAF=0.9073;AVGPOST=0.9735;RSQ=0.8883;ERATE=0.0016;THETA=0.0004;AC=1996;AN=2184 GT:DS:GL:BD 0.91391939 1
1 179138684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.4000;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179138783 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8535;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179139001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9125;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179139031 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5165;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179139056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6669;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179139057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7798;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179139063 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5736;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179139070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9503;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179139179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5892;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179139193 . AT A 1381 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9676;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179139201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.620;LDAF=0.0258;AVGPOST=0.9745;RSQ=0.6346;ERATE=0.0081;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179139210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179139232 . A AG 455 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8881;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179139238 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6004;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179139295 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179139410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8388;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179139482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179139513 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6637;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179139528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8927;ERATE=0.0002;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179139556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4862;AVGPOST=0.9941;RSQ=0.9908;ERATE=0.0011;THETA=0.0003;AC=1064;AN=2184 GT:DS:GL:BD 0.48717949 0
1 179139584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.501;LDAF=0.0034;AVGPOST=0.9959;RSQ=0.5177;ERATE=0.0009;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179139598 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6359;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179139645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0122;AVGPOST=0.9984;RSQ=0.9532;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179139692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7044;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179139792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0107;AVGPOST=0.9981;RSQ=0.9236;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179139807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4296;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179139888 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0052;AVGPOST=0.9982;RSQ=0.8794;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179139933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.3604;AVGPOST=0.9941;RSQ=0.9887;ERATE=0.0009;THETA=0.0003;AC=792;AN=2184 GT:DS:GL:BD 0.36263737 0
1 179140022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9106;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179140029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5533;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179140142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.829;LDAF=0.0086;AVGPOST=0.9970;RSQ=0.8547;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179140145 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3613;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0010;AC=790;AN=2184 GT:DS:GL:BD 0.36172161 0
1 179140178 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9713;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179140237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5353;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179140272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8633;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179140497 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179140574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8520;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179140650 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6125;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179140698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0752;AVGPOST=0.9991;RSQ=0.9943;ERATE=0.0003;THETA=0.0008;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 179140729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0181;AVGPOST=0.9990;RSQ=0.9806;ERATE=0.0002;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179140777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5911;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179141081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179141151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179141290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0149;AVGPOST=0.9981;RSQ=0.9442;ERATE=0.0002;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179141329 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9993;RSQ=0.9626;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179141453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179141477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0041;AVGPOST=0.9965;RSQ=0.7017;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179141488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0163;AVGPOST=0.9992;RSQ=0.9776;ERATE=0.0004;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179141494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179141729 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8810;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179141745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9314;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179141765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0042;AVGPOST=0.9969;RSQ=0.7114;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179141808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179141910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9741;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179142144 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4868;AVGPOST=0.9963;RSQ=0.9936;ERATE=0.0005;THETA=0.0005;AC=1066;AN=2184 GT:DS:GL:BD 0.48809522 0
1 179142360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6401;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179142465 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179142560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0035;AVGPOST=0.9962;RSQ=0.5156;ERATE=0.0009;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179142561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.748;LDAF=0.0153;AVGPOST=0.9961;RSQ=0.9026;ERATE=0.0004;THETA=0.0009;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179142647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.453;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4650;ERATE=0.0005;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179142649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.754;LDAF=0.0546;AVGPOST=0.9847;RSQ=0.8898;ERATE=0.0007;THETA=0.0007;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 179142655 . G GC 288 PASS INDEL;BAVGPOST=0.955;BRSQ=0.696;LDAF=0.0756;AVGPOST=0.9755;RSQ=0.8767;ERATE=0.0005;THETA=0.0007;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 179142656 . C CCCAGCTAA 9871 PASS INDEL;BAVGPOST=0.956;BRSQ=0.744;LDAF=0.1012;AVGPOST=0.9664;RSQ=0.8662;ERATE=0.0032;THETA=0.0007;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 179142695 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0218;AVGPOST=0.9946;RSQ=0.8975;ERATE=0.0005;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179142871 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.9083;ERATE=0.0002;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179142894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0152;AVGPOST=0.9991;RSQ=0.9759;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179142970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0003;THETA=0.0009;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179142989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4700;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179143076 rs3046361 CACCT C 20420 PASS INDEL;BAVGPOST=0.985;BRSQ=0.964;LDAF=0.2235;AVGPOST=0.9772;RSQ=0.9538;ERATE=0.0021;THETA=0.0003;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 179143162 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0067;AVGPOST=0.9950;RSQ=0.7284;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179143181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9880;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179143199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.476;LDAF=0.0229;AVGPOST=0.9709;RSQ=0.5080;ERATE=0.0058;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179143259 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.8100;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179143401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0082;AVGPOST=0.9904;RSQ=0.5882;ERATE=0.0006;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179143606 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0183;AVGPOST=0.9990;RSQ=0.9775;ERATE=0.0004;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179143663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7095;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179143747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4479;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179143796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4418;AVGPOST=0.9924;RSQ=0.9872;ERATE=0.0010;THETA=0.0005;AC=966;AN=2184 GT:DS:GL:BD 0.44230768 0
1 179143835 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0094;AVGPOST=0.9984;RSQ=0.9367;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179143838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.468;LDAF=0.0037;AVGPOST=0.9959;RSQ=0.5788;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179143984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0023;AVGPOST=0.9962;RSQ=0.3102;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179144048 rs67902745 AT A 12610 PASS INDEL;BAVGPOST=0.767;BRSQ=0.530;LDAF=0.6407;AVGPOST=0.7087;RSQ=0.4896;ERATE=0.0641;THETA=0.0005;AC=1524;AN=2184 GT:DS:GL:BD 0.69780219 1
1 179144049 rs67902745 TAAAAAA T 8554 PASS INDEL;BAVGPOST=0.682;BRSQ=0.403;LDAF=0.4133;AVGPOST=0.6822;RSQ=0.4529;ERATE=0.0701;THETA=0.0005;AC=790;AN=2184 GT:DS:GL:BD 0.36172161 0
1 179144135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6247;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179144180 . T TA 30 PASS INDEL;BAVGPOST=0.998;BRSQ=0.471;LDAF=0.0048;AVGPOST=0.9952;RSQ=0.6093;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179144197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.584;LDAF=0.0058;AVGPOST=0.9937;RSQ=0.5675;ERATE=0.0012;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179144216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.5908;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179144317 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8341;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179144449 . T TGTC 1003 PASS INDEL;BAVGPOST=0.996;BRSQ=0.818;LDAF=0.0150;AVGPOST=0.9955;RSQ=0.8945;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179144640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9705;ERATE=0.0008;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179144881 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179144973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.5946;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179145014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0604;AVGPOST=0.9982;RSQ=0.9878;ERATE=0.0004;THETA=0.0006;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 179145069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0059;AVGPOST=0.9995;RSQ=0.9631;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179145134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8567;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179145142 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0033;AVGPOST=0.9946;RSQ=0.4346;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179145148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.617;LDAF=0.0147;AVGPOST=0.9810;RSQ=0.5131;ERATE=0.0041;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179145196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0039;AVGPOST=0.9963;RSQ=0.6151;ERATE=0.0017;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179145225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7911;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179145269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0600;AVGPOST=0.9987;RSQ=0.9906;ERATE=0.0004;THETA=0.0004;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 179145322 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179145380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7111;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179145569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9286;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179145620 rs28914487 C CA 6208 PASS INDEL;BAVGPOST=0.995;BRSQ=0.960;LDAF=0.0746;AVGPOST=0.9974;RSQ=0.9847;ERATE=0.0004;THETA=0.0009;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 179145779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179145791 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6196;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179145817 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9266;ERATE=0.0002;THETA=0.0021;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179145917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.448;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3876;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179146083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5492;ERATE=0.0007;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179146142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6937;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179146212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6108;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179146327 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0602;AVGPOST=0.9989;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 179146332 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179146338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179146352 . C CA 5185 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0570;AVGPOST=0.9964;RSQ=0.9701;ERATE=0.0003;THETA=0.0007;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 179146370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7393;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179146516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7295;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179146521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6292;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179147196 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0159;AVGPOST=0.9998;RSQ=0.9938;ERATE=0.0002;THETA=0.0012;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179147299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8269;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179147396 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6410;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179147411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0025;AVGPOST=0.9961;RSQ=0.4209;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179147463 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.8859;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179147555 . AT A 864 PASS INDEL;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0246;AVGPOST=0.9887;RSQ=0.8325;ERATE=0.0009;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179147702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9535;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179147733 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.937;LDAF=0.0139;AVGPOST=0.9978;RSQ=0.9308;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179147746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4576;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179147831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0027;AVGPOST=0.9956;RSQ=0.4032;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179147897 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0061;AVGPOST=0.9973;RSQ=0.8594;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179147898 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9589;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179148055 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5874;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179148062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8284;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179148068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9996;RSQ=0.9895;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179148224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7772;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179148247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9092;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179148261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179148292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5968;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179148302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0119;AVGPOST=0.9990;RSQ=0.9718;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179148695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7591;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179148739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0756;AVGPOST=0.9993;RSQ=0.9955;ERATE=0.0002;THETA=0.0004;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179148903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0126;AVGPOST=0.9976;RSQ=0.9312;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179149001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9700;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179149002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5312;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179149120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7794;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179149273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.856;LDAF=0.0444;AVGPOST=0.9807;RSQ=0.8217;ERATE=0.0039;THETA=0.0007;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 179149273 . AG A 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8143;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179149274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.926;LDAF=0.4574;AVGPOST=0.9462;RSQ=0.9198;ERATE=0.0134;THETA=0.0003;AC=1014;AN=2184 GT:DS:GL:BD 0.46428570 0
1 179149275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0044;AVGPOST=0.9982;RSQ=0.8175;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179149277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.6042;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179149406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179149468 rs67391044 GT G 3817 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0174;AVGPOST=0.9995;RSQ=0.9881;ERATE=0.0003;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179149526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6338;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179149623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179149692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9530;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179149835 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0065;AVGPOST=0.9986;RSQ=0.9157;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179149853 . GT G 251 PASS INDEL;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7928;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179149882 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.0310;AVGPOST=0.9919;RSQ=0.8976;ERATE=0.0008;THETA=0.0012;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179149893 . GA G 278 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0075;AVGPOST=0.9986;RSQ=0.9216;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179150002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0033;AVGPOST=0.9973;RSQ=0.6910;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179150063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179150292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179150316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9614;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179150357 . AG A 1772 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0131;AVGPOST=0.9966;RSQ=0.8947;ERATE=0.0002;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179150372 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9201;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179150551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5520;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179150556 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0271;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0008;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179150661 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179150690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179150782 . ACT A 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6636;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179150881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179150925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0752;AVGPOST=0.9989;RSQ=0.9925;ERATE=0.0003;THETA=0.0009;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 179150960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0259;AVGPOST=0.9966;RSQ=0.9493;ERATE=0.0005;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179151048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0099;AVGPOST=0.9963;RSQ=0.8531;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179151174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5760;ERATE=0.0007;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179151211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.491;LDAF=0.9963;AVGPOST=0.9949;RSQ=0.5003;ERATE=0.0006;THETA=0.0004;AC=2180;AN=2184 GT:DS:GL:BD 0.99816847 1
1 179151251 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179151271 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179151328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179151486 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179151614 rs56007991 TG T 6288 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0798;AVGPOST=0.9962;RSQ=0.9786;ERATE=0.0005;THETA=0.0028;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 179151710 . TC T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179151726 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6749;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179152167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8466;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179152315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7951;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179152370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0071;AVGPOST=0.9977;RSQ=0.8628;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179152456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.9110;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179152571 . TAAAG T 293 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6689;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179152617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9681;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179152728 rs66640783 T TA 62 PASS INDEL;BAVGPOST=0.997;BRSQ=0.616;LDAF=0.0077;AVGPOST=0.9902;RSQ=0.5342;ERATE=0.0013;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179152729 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6584;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179152751 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7010;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179152874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6375;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179152902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8292;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179153088 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179153135 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179153139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8645;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179153262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179153297 . GGGA G 752 PASS INDEL;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0073;AVGPOST=0.9976;RSQ=0.8708;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179153313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179153401 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179153504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179153527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179153675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0593;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0002;THETA=0.0004;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 179153681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179153697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4351;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0006;THETA=0.0008;AC=952;AN=2184 GT:DS:GL:BD 0.43589744 0
1 179153773 . A AGAT 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5114;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179153954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9478;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179154094 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179154098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0750;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0002;THETA=0.0005;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 179154101 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9668;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179154213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9181;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179154220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179154240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6362;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179154301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9737;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179154348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5494;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179154377 . C CG 157 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7834;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179154435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5858;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179154441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179154457 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0749;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0002;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 179154458 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5809;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179154531 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179154583 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6836;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179154590 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0196;AVGPOST=0.9971;RSQ=0.9441;ERATE=0.0004;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179154591 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5519;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179154605 . TGGAAA T 823 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0076;AVGPOST=0.9973;RSQ=0.8672;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179154696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9273;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179154805 . G GT 9349 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0768;AVGPOST=0.9972;RSQ=0.9834;ERATE=0.0005;THETA=0.0002;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 179154956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7355;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179155200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0757;AVGPOST=0.9981;RSQ=0.9879;ERATE=0.0004;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 179155414 . CAA C 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179155511 . TTTG T 36 PASS INDEL;BAVGPOST=0.994;BRSQ=0.690;LDAF=0.0140;AVGPOST=0.9835;RSQ=0.5508;ERATE=0.0042;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179155538 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8180;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179155554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8921;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179155574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0062;AVGPOST=0.9988;RSQ=0.9233;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179155616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0040;AVGPOST=0.9980;RSQ=0.7955;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179155617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0173;AVGPOST=0.9979;RSQ=0.9513;ERATE=0.0003;THETA=0.0001;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179155641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.959;LDAF=0.4333;AVGPOST=0.9887;RSQ=0.9817;ERATE=0.0012;THETA=0.0006;AC=946;AN=2184 GT:DS:GL:BD 0.43315017 0
1 179155831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8791;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179155879 . C CTATT 4229 PASS INDEL;BAVGPOST=0.993;BRSQ=0.914;LDAF=0.0385;AVGPOST=0.9969;RSQ=0.9695;ERATE=0.0003;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 179156081 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0401;AVGPOST=0.9992;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 179156136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.772;LDAF=0.0078;AVGPOST=0.9987;RSQ=0.9331;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179156145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0748;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0002;THETA=0.0007;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 179156182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6405;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179156261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5929;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179156375 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3604;AVGPOST=0.9961;RSQ=0.9937;ERATE=0.0005;THETA=0.0006;AC=789;AN=2184 GT:DS:GL:BD 0.36126372 0
1 179156621 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.868;LDAF=0.0096;AVGPOST=0.9968;RSQ=0.8613;ERATE=0.0005;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179156690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7955;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179156731 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7838;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179156812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0061;AVGPOST=0.9953;RSQ=0.7027;ERATE=0.0003;THETA=0.0015;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179156814 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4065;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179156963 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0062;AVGPOST=0.9985;RSQ=0.9062;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179156965 . TTTCAC T 967 PASS INDEL;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0068;AVGPOST=0.9978;RSQ=0.8711;ERATE=0.0002;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179156968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0751;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0008;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 179156990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5592;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179157100 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179157208 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6645;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179157291 . G GT 23 PASS INDEL;BAVGPOST=0.995;BRSQ=0.464;LDAF=0.0033;AVGPOST=0.9960;RSQ=0.6008;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179157345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6042;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179157362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179157458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8663;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179157484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9841;ERATE=0.0003;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179157495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0180;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179157520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179157522 . C CA 283 PASS INDEL;BAVGPOST=0.965;BRSQ=0.505;LDAF=0.0634;AVGPOST=0.9195;RSQ=0.4519;ERATE=0.0195;THETA=0.0007;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 179157542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8199;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179157612 . G GT 919 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0120;AVGPOST=0.9988;RSQ=0.9566;ERATE=0.0005;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179157620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9335;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179157712 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0751;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 179157748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0027;AVGPOST=0.9967;RSQ=0.5146;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179157816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0749;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 179157824 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7842;ERATE=0.0012;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179157848 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.7028;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179157871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179157939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179157945 . CA C 50 PASS INDEL;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6475;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179158043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179158104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9009;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179158233 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0118;AVGPOST=0.9993;RSQ=0.9794;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179158406 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3610;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0006;THETA=0.0002;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 179158450 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8779;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179158459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0252;AVGPOST=0.9991;RSQ=0.9845;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179158469 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9826;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179158561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9393;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179158614 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.4965;AVGPOST=0.9883;RSQ=0.9826;ERATE=0.0039;THETA=0.0004;AC=1086;AN=2184 GT:DS:GL:BD 0.49725273 0
1 179158682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0157;AVGPOST=0.9996;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179158733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9345;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179158736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3607;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 179158781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.917;LDAF=0.0950;AVGPOST=0.9913;RSQ=0.9611;ERATE=0.0004;THETA=0.0004;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 179158834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0160;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179158914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0750;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0002;THETA=0.0002;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 179158932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3607;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0002;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 179159013 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5957;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179159094 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179159122 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9869;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179159231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0756;AVGPOST=0.9983;RSQ=0.9901;ERATE=0.0005;THETA=0.0006;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 179159338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7052;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179159369 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0171;AVGPOST=0.9969;RSQ=0.9419;ERATE=0.0004;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179159399 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3607;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 179159427 . GA G 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5762;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179159464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0182;AVGPOST=0.9992;RSQ=0.9803;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179159577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9430;ERATE=0.0003;THETA=0.0021;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179159646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0080;AVGPOST=0.9992;RSQ=0.9518;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179159658 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0053;AVGPOST=0.9990;RSQ=0.9270;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179159684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8306;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179159707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0094;AVGPOST=0.9983;RSQ=0.9265;ERATE=0.0005;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179159716 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.716;LDAF=0.0078;AVGPOST=0.9953;RSQ=0.7687;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179159905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7759;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179159962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0150;AVGPOST=0.9990;RSQ=0.9772;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179160206 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6108;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179160254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0126;AVGPOST=0.9980;RSQ=0.9488;ERATE=0.0004;THETA=0.0014;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179160277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7837;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179160282 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0041;AVGPOST=0.9994;RSQ=0.9411;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179160408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8719;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179160446 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9927;ERATE=0.0002;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179160615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7566;ERATE=0.0003;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179160617 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.4354;AVGPOST=0.9916;RSQ=0.9876;ERATE=0.0013;THETA=0.0006;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 179160661 . T TTC 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5362;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179160665 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0074;AVGPOST=0.9987;RSQ=0.9246;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179160712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5024;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179160951 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.4839;AVGPOST=0.9940;RSQ=0.9902;ERATE=0.0006;THETA=0.0004;AC=1060;AN=2184 GT:DS:GL:BD 0.48534799 0
1 179160957 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.955;LDAF=0.0757;AVGPOST=0.9987;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 179161229 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4782;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179161255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179161517 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179161665 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8577;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179161687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179161849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8653;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179161897 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4375;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=957;AN=2184 GT:DS:GL:BD 0.43818682 0
1 179162004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.5623;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179162055 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0032;AVGPOST=0.9967;RSQ=0.6285;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179162135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5220;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179162145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.3770;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179162241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179162353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4398;AVGPOST=0.9955;RSQ=0.9930;ERATE=0.0006;THETA=0.0006;AC=960;AN=2184 GT:DS:GL:BD 0.43956044 0
1 179162404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8850;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179162432 . CT C 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5251;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179162437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3617;AVGPOST=0.9978;RSQ=0.9960;ERATE=0.0005;THETA=0.0005;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 179162456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4843;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179162470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0038;AVGPOST=0.9961;RSQ=0.6160;ERATE=0.0008;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179162534 . TTTTG T 988 PASS INDEL;BAVGPOST=0.991;BRSQ=0.693;LDAF=0.0104;AVGPOST=0.9972;RSQ=0.8961;ERATE=0.0004;THETA=0.0021;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179162690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179162790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0250;AVGPOST=0.9981;RSQ=0.9687;ERATE=0.0004;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179162831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0023;AVGPOST=0.9970;RSQ=0.4305;ERATE=0.0010;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179162836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0401;AVGPOST=0.9992;RSQ=0.9915;ERATE=0.0003;THETA=0.0005;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 179162865 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9172;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179162867 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.886;LDAF=0.0140;AVGPOST=0.9984;RSQ=0.9571;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179162875 . G GT 18 PASS INDEL;BAVGPOST=0.992;BRSQ=0.398;LDAF=0.0187;AVGPOST=0.9726;RSQ=0.4272;ERATE=0.0066;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179162890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.785;LDAF=0.0068;AVGPOST=0.9928;RSQ=0.5907;ERATE=0.0011;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179162936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4790;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179162967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0188;AVGPOST=0.9979;RSQ=0.9515;ERATE=0.0005;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179163098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179163111 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9079;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179163129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0071;AVGPOST=0.9987;RSQ=0.9232;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179163151 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6596;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179163204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4626;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179163205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0158;AVGPOST=0.9995;RSQ=0.9861;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179163295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8891;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179163337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0174;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0002;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179163453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9995;RSQ=0.9604;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179163760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0759;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0034;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 179163857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3620;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0003;THETA=0.0001;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 179163915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179163932 . GA G 4246 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0576;AVGPOST=0.9964;RSQ=0.9730;ERATE=0.0003;THETA=0.0003;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 179164160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5302;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179164248 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0784;AVGPOST=0.9974;RSQ=0.9856;ERATE=0.0003;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 179164279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6494;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179164301 . TA T 95 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8124;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179164545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0373;AVGPOST=0.9985;RSQ=0.9838;ERATE=0.0002;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 179164558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3659;AVGPOST=0.9961;RSQ=0.9936;ERATE=0.0005;THETA=0.0003;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 179164560 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5023;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179164609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7442;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179164704 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9754;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179164709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8227;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179164861 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179164944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0760;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 179164960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179165091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8806;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179165377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5399;ERATE=0.0010;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179165575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0172;AVGPOST=0.9994;RSQ=0.9867;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179165810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.639;LDAF=0.0084;AVGPOST=0.9934;RSQ=0.6641;ERATE=0.0009;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179165911 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.761;LDAF=0.1437;AVGPOST=0.9090;RSQ=0.7026;ERATE=0.0348;THETA=0.0006;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 179165921 rs71874448 C CA 2987 PASS INDEL;BAVGPOST=0.925;BRSQ=0.585;LDAF=0.1341;AVGPOST=0.8749;RSQ=0.5693;ERATE=0.0415;THETA=0.0005;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 179165972 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.815;LDAF=0.0099;AVGPOST=0.9981;RSQ=0.9152;ERATE=0.0006;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179165997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9286;ERATE=0.0004;THETA=0.0029;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179166008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9758;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179166129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179166151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179166273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.6030;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179166523 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179166709 . AT A 50 PASS INDEL;BAVGPOST=0.969;BRSQ=0.343;LDAF=0.0556;AVGPOST=0.9230;RSQ=0.4203;ERATE=0.0126;THETA=0.0009;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179166711 . T TA 64 PASS INDEL;BAVGPOST=0.970;BRSQ=0.369;LDAF=0.0509;AVGPOST=0.9367;RSQ=0.4843;ERATE=0.0086;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 179166816 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9472;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179166890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5627;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179167024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0055;AVGPOST=0.9949;RSQ=0.6266;ERATE=0.0008;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179167077 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179167080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4447;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179167101 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4140;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179167199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179167303 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.857;LDAF=0.0501;AVGPOST=0.9871;RSQ=0.8941;ERATE=0.0012;THETA=0.0006;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 179167399 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0171;AVGPOST=0.9995;RSQ=0.9856;ERATE=0.0002;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179167404 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0043;AVGPOST=0.9967;RSQ=0.6772;ERATE=0.0012;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179167555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6066;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179167614 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0080;AVGPOST=0.9979;RSQ=0.8961;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179167700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8931;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179167754 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.976;LDAF=0.3627;AVGPOST=0.9815;RSQ=0.9678;ERATE=0.0019;THETA=0.0004;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 179167828 . C CAA 1403 PASS INDEL;BAVGPOST=0.533;BRSQ=0.172;LDAF=0.5272;AVGPOST=0.6220;RSQ=0.3122;ERATE=0.0629;THETA=0.0004;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 179167881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7269;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179167969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0033;AVGPOST=0.9981;RSQ=0.7462;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179168229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.482;LDAF=0.0056;AVGPOST=0.9932;RSQ=0.5490;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179168238 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6853;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179168475 . TAAAA T 563 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8105;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179168518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.809;LDAF=0.0059;AVGPOST=0.9980;RSQ=0.8658;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179168628 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7089;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179168629 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7901;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179168805 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3053;AVGPOST=0.9957;RSQ=0.9935;ERATE=0.0005;THETA=0.0003;AC=664;AN=2184 GT:DS:GL:BD 0.30402932 0
1 179168963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8802;ERATE=0.0004;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179169056 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179169155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.554;LDAF=0.0042;AVGPOST=0.9952;RSQ=0.5095;ERATE=0.0011;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179169172 . GC G 3118 PASS INDEL;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0875;AVGPOST=0.9802;RSQ=0.9140;ERATE=0.0020;THETA=0.0002;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 179169217 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.671;LDAF=0.0033;AVGPOST=0.9975;RSQ=0.7203;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179169246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.4865;AVGPOST=0.9949;RSQ=0.9921;ERATE=0.0006;THETA=0.0002;AC=1067;AN=2184 GT:DS:GL:BD 0.48855311 0
1 179169256 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5234;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179169395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7095;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179169441 . C CA 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.5672;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179169463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0176;AVGPOST=0.9983;RSQ=0.9626;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179169478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.0759;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0001;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 179169588 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0759;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 179169676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9206;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179169795 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0154;AVGPOST=0.9996;RSQ=0.9912;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179169815 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2253;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 179169957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0002;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179169984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9414;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179170023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6442;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179170024 . ATACT A 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6936;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179170153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7431;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179170249 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2258;AVGPOST=0.9981;RSQ=0.9959;ERATE=0.0005;THETA=0.0002;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 179170424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179170427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0248;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0008;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179170486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0082;AVGPOST=0.9985;RSQ=0.9317;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179170563 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9748;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179170597 . AT A 36 PASS INDEL;BAVGPOST=0.972;BRSQ=0.056;LDAF=0.0455;AVGPOST=0.9252;RSQ=0.3717;ERATE=0.0020;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179170643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0195;AVGPOST=0.9973;RSQ=0.9512;ERATE=0.0004;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179170675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179170699 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179170757 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179170784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179170821 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179170845 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179171018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179171070 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.5850;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179171129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4864;AVGPOST=0.9965;RSQ=0.9950;ERATE=0.0004;THETA=0.0005;AC=1065;AN=2184 GT:DS:GL:BD 0.48763737 0
1 179171173 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.970;LDAF=0.1270;AVGPOST=0.9910;RSQ=0.9691;ERATE=0.0004;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 179171248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3620;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 179171494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3055;AVGPOST=0.9969;RSQ=0.9941;ERATE=0.0005;THETA=0.0004;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 179171582 . CTGAG C 1188 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179171592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.7267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179171713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2256;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0003;THETA=0.0008;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 179171731 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0248;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179171755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179171869 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0759;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0002;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 179171870 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0573;AVGPOST=0.9983;RSQ=0.9862;ERATE=0.0002;THETA=0.0005;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 179171880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179171932 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0058;AVGPOST=0.9998;RSQ=0.9851;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179171944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0186;AVGPOST=0.9986;RSQ=0.9696;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179171996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4727;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179172038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.7148;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179172227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9705;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179172248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9993;RSQ=0.9484;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179172404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0011;AVGPOST=0.9982;RSQ=0.3506;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179172665 . C CT 288 PASS INDEL;BAVGPOST=0.963;BRSQ=0.522;LDAF=0.0771;AVGPOST=0.9078;RSQ=0.4829;ERATE=0.0246;THETA=0.0008;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 179172695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0771;AVGPOST=0.9975;RSQ=0.9875;ERATE=0.0002;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 179172699 . G GA 110 PASS INDEL;BAVGPOST=0.978;BRSQ=0.543;LDAF=0.0485;AVGPOST=0.9355;RSQ=0.4393;ERATE=0.0181;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179172718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9355;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179172804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7692;ERATE=0.0010;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179172822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7281;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179172849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8548;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179172856 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3613;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0006;THETA=0.0004;AC=789;AN=2184 GT:DS:GL:BD 0.36126372 0
1 179173102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179173126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6233;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179173506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0248;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0011;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179173520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9034;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179173651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.530;LDAF=0.0375;AVGPOST=0.9584;RSQ=0.5556;ERATE=0.0087;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 179173652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.473;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.4426;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179173771 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.869;LDAF=0.0135;AVGPOST=0.9979;RSQ=0.9323;ERATE=0.0004;THETA=0.0001;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179173907 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6262;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179174001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6674;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179174021 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9628;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179174069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179174140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0757;AVGPOST=0.9983;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179174193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.961;LDAF=0.4252;AVGPOST=0.9640;RSQ=0.9435;ERATE=0.0031;THETA=0.0004;AC=943;AN=2184 GT:DS:GL:BD 0.43177655 0
1 179174201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.456;LDAF=0.0176;AVGPOST=0.9863;RSQ=0.7086;ERATE=0.0005;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179174221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0073;AVGPOST=0.9980;RSQ=0.8775;ERATE=0.0005;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179174354 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.948;LDAF=0.1614;AVGPOST=0.9842;RSQ=0.9535;ERATE=0.0006;THETA=0.0003;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 179174502 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7717;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179174536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9582;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179174544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179174558 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9628;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179174794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9135;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179174818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0401;AVGPOST=0.9994;RSQ=0.9937;ERATE=0.0003;THETA=0.0010;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 179174823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.9036;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179174853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5272;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179174878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4687;AVGPOST=0.9965;RSQ=0.9942;ERATE=0.0009;THETA=0.0005;AC=1024;AN=2184 GT:DS:GL:BD 0.46886447 0
1 179175011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5207;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179175142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0043;AVGPOST=0.9990;RSQ=0.9100;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179175162 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0086;AVGPOST=0.9979;RSQ=0.8973;ERATE=0.0004;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179175191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5394;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179175297 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6337;ERATE=0.0014;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179175326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.8947;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179175399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179175463 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179175540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.6657;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179175554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179175667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.6949;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179175691 . A AC 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179175723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8621;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179175807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8344;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179175972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179176004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8893;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179176020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9915;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179176119 . TGAAA T 286 PASS INDEL;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0061;AVGPOST=0.9910;RSQ=0.4789;ERATE=0.0015;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179176122 . AAGAG A 206 PASS INDEL;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0045;AVGPOST=0.9955;RSQ=0.6245;ERATE=0.0019;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179176170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7132;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179176196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9410;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179176241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6677;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179176247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9461;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179176398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4883;AVGPOST=0.9970;RSQ=0.9952;ERATE=0.0003;THETA=0.0006;AC=1067;AN=2184 GT:DS:GL:BD 0.48855311 0
1 179176413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179176469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179176583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5352;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179176662 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179176699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5470;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179176770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7233;ERATE=0.0008;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179176773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.662;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7099;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179176849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9583;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179176883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7553;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179176898 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7626;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179176938 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8113;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179177071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4139;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179177102 . C CT 185 PASS INDEL;BAVGPOST=0.992;BRSQ=0.592;LDAF=0.0221;AVGPOST=0.9718;RSQ=0.4997;ERATE=0.0054;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179177217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9996;RSQ=0.9900;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179177259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179177381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4209;ERATE=0.0004;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179177470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179177508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0158;AVGPOST=0.9992;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179177594 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9861;ERATE=0.0002;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179177623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6888;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179177646 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7604;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179177692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6668;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179177728 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6406;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179177805 rs28991594 ATCTC A 11466 PASS INDEL;BAVGPOST=0.995;BRSQ=0.968;LDAF=0.0750;AVGPOST=0.9962;RSQ=0.9781;ERATE=0.0004;THETA=0.0004;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179177896 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0412;AVGPOST=0.9990;RSQ=0.9895;ERATE=0.0004;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179177898 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3794;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179178170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0002;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179178382 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179178383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7363;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179178441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.9081;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179178490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0391;AVGPOST=0.9983;RSQ=0.9846;ERATE=0.0002;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 179178491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0002;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179178568 . T TG 27 PASS INDEL;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0071;AVGPOST=0.9931;RSQ=0.6345;ERATE=0.0026;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179178773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6767;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179179046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9109;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179179048 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179179144 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8125;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179179176 . A AT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4989;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179179192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6706;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179179280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179179311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0169;AVGPOST=0.9995;RSQ=0.9866;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179179358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0035;AVGPOST=0.9970;RSQ=0.6674;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179179458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0191;AVGPOST=0.9975;RSQ=0.9478;ERATE=0.0004;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179179467 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8167;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179179502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9083;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179179594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4127;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179179715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0026;AVGPOST=0.9960;RSQ=0.3673;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179179747 . T TGG 70 PASS INDEL;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0035;AVGPOST=0.9948;RSQ=0.4755;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179179802 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6916;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179179993 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0065;AVGPOST=0.9981;RSQ=0.8747;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179180002 . T TA 756 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9956;RSQ=0.7947;ERATE=0.0005;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179180009 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0077;AVGPOST=0.9947;RSQ=0.7562;ERATE=0.0007;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179180382 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.4340;AVGPOST=0.9931;RSQ=0.9887;ERATE=0.0005;THETA=0.0009;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 179180424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.969;LDAF=0.2973;AVGPOST=0.9868;RSQ=0.9774;ERATE=0.0026;THETA=0.0005;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 179180495 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0170;AVGPOST=0.9930;RSQ=0.8524;ERATE=0.0005;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179180608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7136;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179180647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179180876 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6118;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179180893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0236;AVGPOST=0.9972;RSQ=0.9573;ERATE=0.0005;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179180942 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.964;LDAF=0.2253;AVGPOST=0.9846;RSQ=0.9662;ERATE=0.0037;THETA=0.0010;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 179181004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8852;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179181005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0063;AVGPOST=0.9986;RSQ=0.9035;ERATE=0.0005;THETA=0.0016;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179181053 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7059;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179181102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3597;AVGPOST=0.9970;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 179181130 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9304;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179181546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3612;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0004;THETA=0.0014;AC=790;AN=2184 GT:DS:GL:BD 0.36172161 0
1 179181692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0012;AVGPOST=0.9981;RSQ=0.2856;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179181694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7347;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179181776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179181792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.530;LDAF=0.0174;AVGPOST=0.9755;RSQ=0.4308;ERATE=0.0069;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179181868 . C CA 566 PASS INDEL;BAVGPOST=0.983;BRSQ=0.642;LDAF=0.0384;AVGPOST=0.9584;RSQ=0.5756;ERATE=0.0097;THETA=0.0007;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179181919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.434;LDAF=0.0081;AVGPOST=0.9865;RSQ=0.3475;ERATE=0.0024;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179181955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0398;AVGPOST=0.9992;RSQ=0.9919;ERATE=0.0004;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 179182000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.899;LDAF=0.0137;AVGPOST=0.9986;RSQ=0.9551;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179182096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0056;AVGPOST=0.9965;RSQ=0.7214;ERATE=0.0007;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179182113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0754;AVGPOST=0.9969;RSQ=0.9834;ERATE=0.0005;THETA=0.0004;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 179182232 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4467;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179182277 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.645;LDAF=0.0229;AVGPOST=0.9844;RSQ=0.7343;ERATE=0.0007;THETA=0.0001;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179182287 . ATGTC A 194 PASS INDEL;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7429;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179182295 . CTAAAA C 56 PASS INDEL;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5447;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179182313 . CAT C 533 PASS INDEL;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0058;AVGPOST=0.9950;RSQ=0.6399;ERATE=0.0017;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179182420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179182446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4631;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179182499 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8560;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179182527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0062;AVGPOST=0.9946;RSQ=0.6714;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179182925 rs67246415 TA T 6600 PASS INDEL;BAVGPOST=0.995;BRSQ=0.964;LDAF=0.0717;AVGPOST=0.9933;RSQ=0.9632;ERATE=0.0006;THETA=0.0006;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 179182929 . AG A 20332 PASS INDEL;BAVGPOST=0.990;BRSQ=0.426;LDAF=0.9834;AVGPOST=0.9800;RSQ=0.5251;ERATE=0.0032;THETA=0.0003;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 179183105 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9655;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179183202 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0038;AVGPOST=0.9936;RSQ=0.3963;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179183208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179183211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8580;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179183219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0077;AVGPOST=0.9995;RSQ=0.9745;ERATE=0.0002;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179183234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.7942;ERATE=0.0010;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179183239 . A AT 23 PASS INDEL;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6891;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179183250 . C CA 35 PASS INDEL;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0045;AVGPOST=0.9970;RSQ=0.7078;ERATE=0.0005;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179183608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6426;ERATE=0.0006;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179183631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.4941;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179183634 . GAAC G 60 PASS INDEL;BAVGPOST=0.998;BRSQ=0.510;LDAF=0.0075;AVGPOST=0.9912;RSQ=0.5290;ERATE=0.0007;THETA=0.0048;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179183683 . ATATG A 398 PASS INDEL;BAVGPOST=0.857;BRSQ=0.312;LDAF=0.1655;AVGPOST=0.8195;RSQ=0.4653;ERATE=0.0180;THETA=0.0006;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 179183705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0035;AVGPOST=0.9955;RSQ=0.4850;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179183765 rs67539726 ATTGT A 168 PASS INDEL;BAVGPOST=0.997;BRSQ=0.578;LDAF=0.0106;AVGPOST=0.9880;RSQ=0.5443;ERATE=0.0013;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179183766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3601;AVGPOST=0.9950;RSQ=0.9921;ERATE=0.0004;THETA=0.0005;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 179183777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0201;AVGPOST=0.9988;RSQ=0.9746;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 179183846 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0153;AVGPOST=0.9983;RSQ=0.9581;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179184069 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6825;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179184114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8670;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179184140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.3024;AVGPOST=0.9951;RSQ=0.9912;ERATE=0.0004;THETA=0.0014;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 179184152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0033;AVGPOST=0.9963;RSQ=0.5638;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179184168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0040;AVGPOST=0.9927;RSQ=0.3211;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179184241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9991;RSQ=0.0913;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179184309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0182;AVGPOST=0.9992;RSQ=0.9794;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179184316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0187;AVGPOST=0.9975;RSQ=0.9502;ERATE=0.0004;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179184553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4995;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179184620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3622;AVGPOST=0.9971;RSQ=0.9945;ERATE=0.0006;THETA=0.0003;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 179184723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8203;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179184743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6609;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179184808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0593;AVGPOST=0.9958;RSQ=0.9700;ERATE=0.0003;THETA=0.0005;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 179184884 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7731;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179184995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4487;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179185042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179185162 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0034;AVGPOST=0.9971;RSQ=0.7084;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179185172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0181;AVGPOST=0.9990;RSQ=0.9745;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179185206 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179185240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7872;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179185279 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0404;AVGPOST=0.9991;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 179185289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0303;AVGPOST=0.9993;RSQ=0.9900;ERATE=0.0003;THETA=0.0011;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 179185337 . T TG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4959;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179185715 . T TA 35 PASS INDEL;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0042;AVGPOST=0.9977;RSQ=0.7659;ERATE=0.0005;THETA=0.0038;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179185963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.740;LDAF=0.0174;AVGPOST=0.9928;RSQ=0.8408;ERATE=0.0006;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179185967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.418;LDAF=0.0049;AVGPOST=0.9940;RSQ=0.4801;ERATE=0.0010;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179186031 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.474;LDAF=0.0033;AVGPOST=0.9943;RSQ=0.3215;ERATE=0.0009;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179186067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.4802;AVGPOST=0.9793;RSQ=0.9684;ERATE=0.0027;THETA=0.0004;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 179186247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.796;LDAF=0.0385;AVGPOST=0.9692;RSQ=0.6901;ERATE=0.0033;THETA=0.0008;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179186257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7792;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179186351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179186361 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0136;AVGPOST=0.9988;RSQ=0.9607;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179186362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5814;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179186448 . C CA 37 PASS INDEL;BAVGPOST=0.985;BRSQ=0.439;LDAF=0.0243;AVGPOST=0.9701;RSQ=0.5244;ERATE=0.0050;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179186467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0180;AVGPOST=0.9968;RSQ=0.9378;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179186510 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5219;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179186547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.810;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9221;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179186559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.943;LDAF=0.4752;AVGPOST=0.9797;RSQ=0.9701;ERATE=0.0022;THETA=0.0003;AC=1045;AN=2184 GT:DS:GL:BD 0.47847986 0
1 179186705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0187;AVGPOST=0.9995;RSQ=0.9886;ERATE=0.0003;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179186857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9825;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179186908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0141;AVGPOST=0.9984;RSQ=0.9607;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179187008 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9603;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179187126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0047;AVGPOST=0.9993;RSQ=0.9430;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179187127 . A AT 65 PASS INDEL;BAVGPOST=0.998;BRSQ=0.687;LDAF=0.0038;AVGPOST=0.9975;RSQ=0.7517;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179187146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6409;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179187244 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9628;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179187354 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5970;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179187364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9364;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179187369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5507;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179187481 . GT G 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6573;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179187550 . T TC 533 PASS INDEL;BAVGPOST=0.859;BRSQ=0.586;LDAF=0.1819;AVGPOST=0.8542;RSQ=0.6518;ERATE=0.0122;THETA=0.0006;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 179187820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179187942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179187979 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179187991 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5257;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179188006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2260;AVGPOST=0.9981;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 179188103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179188217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6688;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179188329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0186;AVGPOST=0.9997;RSQ=0.9941;ERATE=0.0002;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179188337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7842;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179188375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.6690;ERATE=0.0006;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179188537 . G GA 317 PASS INDEL;BAVGPOST=0.994;BRSQ=0.740;LDAF=0.0126;AVGPOST=0.9883;RSQ=0.6662;ERATE=0.0025;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179188592 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179188701 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5149;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179188732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0136;AVGPOST=0.9990;RSQ=0.9678;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179188825 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6777;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179188856 rs111635767 T TC 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179188891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.4468;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179189014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0070;AVGPOST=0.9992;RSQ=0.9480;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179189112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8376;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179189126 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.7811;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179189328 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0758;AVGPOST=0.9989;RSQ=0.9947;ERATE=0.0002;THETA=0.0003;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179189411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6765;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179189413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8407;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179189549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6718;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179189626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179189668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8536;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179189734 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179189845 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.2207;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0002;THETA=0.0006;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 179189864 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179190122 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179190220 . A AC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179190552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7705;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179190595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179190638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7785;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179190658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.947;LDAF=0.0916;AVGPOST=0.9913;RSQ=0.9611;ERATE=0.0003;THETA=0.0003;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 179190681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0080;AVGPOST=0.9952;RSQ=0.7846;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179190770 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0002;THETA=0.0009;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179190774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179190806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9594;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179190816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179190852 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179190891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0391;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 179190899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9513;ERATE=0.0002;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179191047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179191054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179191168 . CA C 345 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9180;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179191395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179191396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6884;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179191465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8920;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179191476 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.652;LDAF=0.0132;AVGPOST=0.9841;RSQ=0.5445;ERATE=0.0037;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179191531 . A AT 360 PASS INDEL;BAVGPOST=0.968;BRSQ=0.600;LDAF=0.0772;AVGPOST=0.9134;RSQ=0.5127;ERATE=0.0156;THETA=0.0002;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 179191560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4672;AVGPOST=0.9954;RSQ=0.9923;ERATE=0.0005;THETA=0.0009;AC=1023;AN=2184 GT:DS:GL:BD 0.46840659 0
1 179191590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7330;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179191629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0075;AVGPOST=0.9982;RSQ=0.9009;ERATE=0.0004;THETA=0.0026;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179191645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.898;LDAF=0.0495;AVGPOST=0.9948;RSQ=0.9567;ERATE=0.0003;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 179191683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6878;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179191784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0049;AVGPOST=0.9935;RSQ=0.4908;ERATE=0.0009;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179191822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179191905 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7173;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179191958 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.770;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8925;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179192238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.960;LDAF=0.3576;AVGPOST=0.9836;RSQ=0.9742;ERATE=0.0014;THETA=0.0003;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 179192321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179192357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7506;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179192445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6249;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179192608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5403;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179192609 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0002;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179192616 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0184;AVGPOST=0.9988;RSQ=0.9729;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179192839 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0031;AVGPOST=0.9977;RSQ=0.7137;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179193002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0172;AVGPOST=0.9984;RSQ=0.9613;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179193253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0026;AVGPOST=0.9970;RSQ=0.5467;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179193283 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.754;LDAF=0.0107;AVGPOST=0.9970;RSQ=0.8835;ERATE=0.0004;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179193402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0154;AVGPOST=0.9977;RSQ=0.9350;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179193433 . GCT G 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4203;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179193494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0195;AVGPOST=0.9968;RSQ=0.9343;ERATE=0.0007;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179193500 . CA C 90 PASS INDEL;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6158;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179193665 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.600;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.5935;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179193677 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6487;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179193932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3043;AVGPOST=0.9938;RSQ=0.9888;ERATE=0.0009;THETA=0.0015;AC=665;AN=2184 GT:DS:GL:BD 0.30448717 0
1 179193953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8006;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179194030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179194160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4876;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179194569 . C CACCT 165 PASS INDEL;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5263;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179194721 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4863;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179194727 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6116;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179194732 . A AT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4292;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179194942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4758;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179195035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.858;LDAF=0.0462;AVGPOST=0.9850;RSQ=0.8670;ERATE=0.0007;THETA=0.0004;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 179195178 rs71758673 C CA 390 PASS INDEL;BAVGPOST=0.462;BRSQ=0.101;LDAF=0.4915;AVGPOST=0.6397;RSQ=0.3710;ERATE=0.0236;THETA=0.0005;AC=1027;AN=2184 GT:DS:GL:BD 0.47023809 0
1 179195240 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0776;AVGPOST=0.9959;RSQ=0.9792;ERATE=0.0004;THETA=0.0008;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 179195585 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179195649 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8507;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179195693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0821;AVGPOST=0.9962;RSQ=0.9800;ERATE=0.0011;THETA=0.0005;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 179195761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0414;AVGPOST=0.9974;RSQ=0.9754;ERATE=0.0004;THETA=0.0007;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 179195777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2257;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 179195868 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8968;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179195875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8974;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179195971 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179196121 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8656;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179196279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8681;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179196286 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7461;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179196632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5741;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179196635 . T TG 2250 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9996;RSQ=0.9893;ERATE=0.0003;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179196652 . GA G 192 PASS INDEL;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7495;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179196668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179196698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5491;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179196719 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.840;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9737;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179196823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179196877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5361;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179196925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.674;LDAF=0.0037;AVGPOST=0.9969;RSQ=0.6295;ERATE=0.0011;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179196996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0186;AVGPOST=0.9973;RSQ=0.9482;ERATE=0.0005;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179197043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0047;AVGPOST=0.9957;RSQ=0.6174;ERATE=0.0006;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179197162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0194;AVGPOST=0.9959;RSQ=0.9192;ERATE=0.0006;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179197164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.459;LDAF=0.0061;AVGPOST=0.9947;RSQ=0.6678;ERATE=0.0008;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179197338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.663;LDAF=0.0035;AVGPOST=0.9972;RSQ=0.6660;ERATE=0.0008;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179197339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.951;LDAF=0.0379;AVGPOST=0.9951;RSQ=0.9457;ERATE=0.0004;THETA=0.0005;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 179197387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3463;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179197475 . C CT 2467 PASS INDEL;BAVGPOST=0.996;BRSQ=0.925;LDAF=0.0261;AVGPOST=0.9973;RSQ=0.9607;ERATE=0.0004;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179197481 rs11298096 CA C 721 PASS INDEL;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0151;AVGPOST=0.9967;RSQ=0.9090;ERATE=0.0005;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179197623 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9697;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179197645 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.2035;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179197827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179198653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.957;LDAF=0.4548;AVGPOST=0.9608;RSQ=0.9360;ERATE=0.0027;THETA=0.0003;AC=1003;AN=2184 GT:DS:GL:BD 0.45924908 0
1 179198846 rs28990068 TCCCGCCCCCCGCCC T 331 PASS INDEL;BAVGPOST=0.496;BRSQ=0.028;LDAF=0.2333;AVGPOST=0.7478;RSQ=0.4455;ERATE=0.0093;THETA=0.0003;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 179198876 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.572;BRSQ=0.093;LDAF=0.3109;AVGPOST=0.8363;RSQ=0.6942;ERATE=0.0105;THETA=0.0003;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 179198962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.868;LDAF=0.0261;AVGPOST=0.9890;RSQ=0.8308;ERATE=0.0008;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179199007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0250;AVGPOST=0.9914;RSQ=0.8810;ERATE=0.0006;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179199008 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0230;AVGPOST=0.9940;RSQ=0.8929;ERATE=0.0005;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179199055 . TC T 140 PASS INDEL;BAVGPOST=0.886;BRSQ=0.020;LDAF=0.1498;AVGPOST=0.8087;RSQ=0.4329;ERATE=0.0054;THETA=0.0005;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 179199076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.958;LDAF=0.3636;AVGPOST=0.9904;RSQ=0.9832;ERATE=0.0010;THETA=0.0006;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 179199191 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0763;AVGPOST=0.9990;RSQ=0.9934;ERATE=0.0005;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 179199309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.756;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.9112;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179199458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9225;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179199593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8722;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179199652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2254;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0001;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 179199736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9889;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179199817 . A AT 435 PASS INDEL;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0119;AVGPOST=0.9917;RSQ=0.7448;ERATE=0.0008;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179199832 rs10658798 C CAA 67870 PASS INDEL;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4707;AVGPOST=0.9911;RSQ=0.9863;ERATE=0.0018;THETA=0.0005;AC=1027;AN=2184 GT:DS:GL:BD 0.47023809 0
1 179199998 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7080;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179200153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6417;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179200287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9605;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179200402 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0034;AVGPOST=0.9976;RSQ=0.7286;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179200657 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3033;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 179200699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179200813 . CT C 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5600;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179200839 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8995;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179200937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5004;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179200951 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4516;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179201000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2282;AVGPOST=0.9956;RSQ=0.9907;ERATE=0.0005;THETA=0.0021;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 179201019 . A AG 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4485;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179201020 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.8950;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179201076 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.666;LDAF=0.0161;AVGPOST=0.9921;RSQ=0.7988;ERATE=0.0006;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179201131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7221;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179201155 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4734;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179201305 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.883;LDAF=0.0087;AVGPOST=0.9982;RSQ=0.9164;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179201368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9050;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179201438 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3632;AVGPOST=0.9967;RSQ=0.9944;ERATE=0.0004;THETA=0.0002;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 179201482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179201489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4688;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=1025;AN=2184 GT:DS:GL:BD 0.46932235 0
1 179201534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4705;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179201605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.928;LDAF=0.4774;AVGPOST=0.9627;RSQ=0.9473;ERATE=0.0042;THETA=0.0004;AC=1055;AN=2184 GT:DS:GL:BD 0.48305860 0
1 179201622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.917;LDAF=0.4652;AVGPOST=0.9517;RSQ=0.9320;ERATE=0.0070;THETA=0.0006;AC=1034;AN=2184 GT:DS:GL:BD 0.47344321 0
1 179201763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.698;LDAF=0.0244;AVGPOST=0.9884;RSQ=0.8039;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179202022 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179202023 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0761;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 179202082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0072;AVGPOST=0.9979;RSQ=0.9032;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179202185 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0111;AVGPOST=0.9983;RSQ=0.9403;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179202198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0258;AVGPOST=0.9982;RSQ=0.9747;ERATE=0.0003;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179202209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3220;AVGPOST=0.9947;RSQ=0.9924;ERATE=0.0003;THETA=0.0002;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 179202212 . T TC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7148;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179202394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0110;AVGPOST=0.9966;RSQ=0.8852;ERATE=0.0007;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179202527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.536;LDAF=0.0105;AVGPOST=0.9895;RSQ=0.5971;ERATE=0.0006;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179202536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5742;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179203016 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.817;LDAF=0.0095;AVGPOST=0.9963;RSQ=0.8581;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179203081 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7458;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179203171 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179203254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=0.9997;RSQ=0.9885;ERATE=0.0002;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179203294 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.522;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7133;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179203361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9977;RSQ=0.8393;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179203372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0034;AVGPOST=0.9980;RSQ=0.7873;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179203663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0589;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0002;THETA=0.0002;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 179203741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0780;AVGPOST=0.9991;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 179203966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.8937;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179204075 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4882;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0006;THETA=0.0004;AC=1067;AN=2184 GT:DS:GL:BD 0.48855311 0
1 179204106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179204109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9457;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179204132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7742;ERATE=0.0010;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179204421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0779;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0002;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 179204442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179204502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5487;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179204553 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0077;AVGPOST=0.9986;RSQ=0.9178;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179204575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5609;ERATE=0.0005;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179204850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9342;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179205067 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.953;LDAF=0.0295;AVGPOST=0.9984;RSQ=0.9750;ERATE=0.0004;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179205191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179205265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179205658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9072;ERATE=0.0003;THETA=0.0027;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179205695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179205920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.7008;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179206226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0303;AVGPOST=0.9986;RSQ=0.9802;ERATE=0.0006;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 179206272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.8955;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179206408 . GAT G 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0059;AVGPOST=0.9948;RSQ=0.6481;ERATE=0.0006;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179206591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0031;AVGPOST=0.9974;RSQ=0.6926;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179206849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8503;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179206868 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6374;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179206931 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179207068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4019;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179207150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9956;RSQ=0.6786;ERATE=0.0009;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179207197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.7948;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179207227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.819;LDAF=0.0091;AVGPOST=0.9946;RSQ=0.7758;ERATE=0.0004;THETA=0.0025;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179207269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5666;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179207280 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9518;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179207314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6253;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179207416 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0181;AVGPOST=0.9995;RSQ=0.9859;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179207474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8831;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179207702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179207876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9576;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179208008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8717;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179208034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4995;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179208036 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7612;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179208182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9988;RSQ=0.9226;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179208225 . G GC 486 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9993;RSQ=0.9490;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179208272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0181;AVGPOST=0.9995;RSQ=0.9858;ERATE=0.0004;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179208296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6956;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179208339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8038;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179208408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6644;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179208482 . T TTTG 2160 PASS INDEL;BAVGPOST=0.982;BRSQ=0.820;LDAF=0.0602;AVGPOST=0.9809;RSQ=0.8701;ERATE=0.0040;THETA=0.0008;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 179208524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0760;AVGPOST=0.9992;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 179208668 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.906;LDAF=0.0430;AVGPOST=0.9964;RSQ=0.9687;ERATE=0.0003;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 179208753 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5316;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179208758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0181;AVGPOST=0.9990;RSQ=0.9754;ERATE=0.0002;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179208822 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5679;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179208835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9023;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179208872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9220;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179208890 . CT C 46 PASS INDEL;BAVGPOST=0.999;BRSQ=0.572;LDAF=0.0029;AVGPOST=0.9961;RSQ=0.5211;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179209064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.740;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6510;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179209384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0021;AVGPOST=0.9972;RSQ=0.4589;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179209446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7039;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179209523 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9239;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179209560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179209603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.661;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8412;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179209674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0601;AVGPOST=0.9963;RSQ=0.9719;ERATE=0.0005;THETA=0.0002;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 179209677 . TA T 56 PASS INDEL;BAVGPOST=0.987;BRSQ=0.447;LDAF=0.0223;AVGPOST=0.9692;RSQ=0.4534;ERATE=0.0071;THETA=0.0025;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179209691 . TA T 1903 PASS INDEL;BAVGPOST=0.975;BRSQ=0.839;LDAF=0.0673;AVGPOST=0.9886;RSQ=0.9264;ERATE=0.0007;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 179209693 . AG A 157 PASS INDEL;BAVGPOST=0.971;BRSQ=0.677;LDAF=0.0512;AVGPOST=0.9635;RSQ=0.7289;ERATE=0.0020;THETA=0.0009;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 179209706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0094;AVGPOST=0.9878;RSQ=0.5521;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179209986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7091;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179210022 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0181;AVGPOST=0.9992;RSQ=0.9799;ERATE=0.0004;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179210037 rs112836274 G GT 6458 PASS INDEL;BAVGPOST=0.988;BRSQ=0.937;LDAF=0.0902;AVGPOST=0.9771;RSQ=0.8915;ERATE=0.0053;THETA=0.0007;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 179210047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179210271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0193;AVGPOST=0.9969;RSQ=0.9328;ERATE=0.0006;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179210280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.3005;ERATE=0.0009;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179210291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0196;AVGPOST=0.9964;RSQ=0.9274;ERATE=0.0005;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 179210428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0764;AVGPOST=0.9979;RSQ=0.9862;ERATE=0.0006;THETA=0.0004;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 179210498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8995;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179210621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179210647 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179210676 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0757;AVGPOST=0.9973;RSQ=0.9869;ERATE=0.0003;THETA=0.0005;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 179210689 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179210751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6959;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179210864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5550;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179210872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7617;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179210957 . A AT 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6293;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179211006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7759;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179211128 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179211312 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0770;AVGPOST=0.9978;RSQ=0.9890;ERATE=0.0003;THETA=0.0005;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 179211344 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0759;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0002;THETA=0.0005;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 179211351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9992;RSQ=0.9517;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179211353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179211561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4642;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0004;THETA=0.0021;AC=1015;AN=2184 GT:DS:GL:BD 0.46474358 0
1 179211609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9234;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179211677 . CAA C 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5886;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179211837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5617;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179211872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0190;AVGPOST=0.9976;RSQ=0.9515;ERATE=0.0005;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179212095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179212162 . CAT C 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4682;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179212166 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4966;AVGPOST=0.9959;RSQ=0.9937;ERATE=0.0004;THETA=0.0007;AC=1087;AN=2184 GT:DS:GL:BD 0.49771062 0
1 179212196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0313;AVGPOST=0.9995;RSQ=0.9926;ERATE=0.0003;THETA=0.0008;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 179212233 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179212260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0061;AVGPOST=0.9982;RSQ=0.8906;ERATE=0.0002;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179212335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7621;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179212338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179212379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179212397 . G GT 2574 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=0.9983;RSQ=0.9654;ERATE=0.0005;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179212669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0283;AVGPOST=0.9998;RSQ=0.9966;ERATE=0.0002;THETA=0.0007;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179212823 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179212861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179212968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6390;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179212983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9364;ERATE=0.0002;THETA=0.0026;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179213116 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0094;AVGPOST=0.9996;RSQ=0.9855;ERATE=0.0002;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179213192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179213217 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5087;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179213356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8409;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179213439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7881;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179213584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179213594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8164;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179213806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0047;AVGPOST=0.9929;RSQ=0.3633;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179213806 . CG C 117 PASS INDEL;BAVGPOST=0.974;BRSQ=0.753;LDAF=0.0571;AVGPOST=0.9944;RSQ=0.9553;ERATE=0.0005;THETA=0.0003;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 179213833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0194;AVGPOST=0.9954;RSQ=0.9040;ERATE=0.0004;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179213885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0142;AVGPOST=0.9962;RSQ=0.8847;ERATE=0.0006;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179213912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7151;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179213972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179214023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179214110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0409;AVGPOST=0.9994;RSQ=0.9929;ERATE=0.0002;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 179214301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.893;LDAF=0.0254;AVGPOST=0.9912;RSQ=0.8735;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 179214322 . AC A 922 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0068;AVGPOST=0.9983;RSQ=0.8969;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179214389 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.798;LDAF=0.0046;AVGPOST=0.9971;RSQ=0.7986;ERATE=0.0004;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179214631 rs5779012 ACT A 27287 PASS INDEL;BAVGPOST=0.957;BRSQ=0.919;LDAF=0.3828;AVGPOST=0.9888;RSQ=0.9818;ERATE=0.0006;THETA=0.0004;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 179214717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0170;AVGPOST=0.9981;RSQ=0.9603;ERATE=0.0003;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179214721 . C CA 307 PASS INDEL;BAVGPOST=0.976;BRSQ=0.580;LDAF=0.0431;AVGPOST=0.9544;RSQ=0.5678;ERATE=0.0073;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179214726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.969;LDAF=0.3781;AVGPOST=0.9752;RSQ=0.9606;ERATE=0.0050;THETA=0.0006;AC=832;AN=2184 GT:DS:GL:BD 0.38095239 0
1 179214748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9689;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179214766 . T TA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5268;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179214903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179214905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0411;AVGPOST=0.9987;RSQ=0.9852;ERATE=0.0004;THETA=0.0009;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 179214975 . G GCTAC 530 PASS INDEL;BAVGPOST=0.996;BRSQ=0.455;LDAF=0.0078;AVGPOST=0.9945;RSQ=0.7523;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179215115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.517;LDAF=0.0058;AVGPOST=0.9934;RSQ=0.5492;ERATE=0.0009;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179215120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.892;BRSQ=0.703;LDAF=0.2812;AVGPOST=0.8467;RSQ=0.6631;ERATE=0.0371;THETA=0.0003;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 179215123 . A AC 19 PASS INDEL;BAVGPOST=0.998;BRSQ=0.647;LDAF=0.0072;AVGPOST=0.9941;RSQ=0.6737;ERATE=0.0008;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179215315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0172;AVGPOST=0.9990;RSQ=0.9734;ERATE=0.0004;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179215331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0682;AVGPOST=0.9978;RSQ=0.9863;ERATE=0.0004;THETA=0.0003;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 179215368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0151;AVGPOST=0.9990;RSQ=0.9747;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179215419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8094;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179215549 . CT C 306 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0064;AVGPOST=0.9978;RSQ=0.8816;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179215675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0031;AVGPOST=0.9973;RSQ=0.6441;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179215680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0410;AVGPOST=0.9992;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 179215688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7587;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179215747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.945;LDAF=0.3035;AVGPOST=0.9835;RSQ=0.9723;ERATE=0.0012;THETA=0.0008;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 179215760 . T TC 493 PASS INDEL;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0182;AVGPOST=0.9978;RSQ=0.9452;ERATE=0.0005;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179215764 . T TC 339 PASS INDEL;BAVGPOST=0.996;BRSQ=0.896;LDAF=0.0215;AVGPOST=0.9943;RSQ=0.9032;ERATE=0.0003;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 179215765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0189;AVGPOST=0.9981;RSQ=0.9584;ERATE=0.0004;THETA=0.0011;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179215918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.961;LDAF=0.3856;AVGPOST=0.9772;RSQ=0.9647;ERATE=0.0026;THETA=0.0005;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 179215933 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.5851;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179216063 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179216133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5943;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179216213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179216353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5287;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179216447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.736;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8198;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179216484 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5765;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179216538 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8417;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179216548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0124;AVGPOST=0.9980;RSQ=0.9396;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179216642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5185;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179216736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4989;AVGPOST=0.9885;RSQ=0.9822;ERATE=0.0023;THETA=0.0003;AC=1086;AN=2184 GT:DS:GL:BD 0.49725273 0
1 179216748 . TACA T 72 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.6181;ERATE=0.0009;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179216768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7862;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179216900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.4697;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179216944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8473;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179217099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0180;AVGPOST=0.9981;RSQ=0.9605;ERATE=0.0004;THETA=0.0035;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179217236 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3124;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0005;THETA=0.0014;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 179217247 . G GGAAA 1592 PASS INDEL;BAVGPOST=0.986;BRSQ=0.776;LDAF=0.0384;AVGPOST=0.9848;RSQ=0.8584;ERATE=0.0005;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 179217317 rs60293082 GGGAA G 32485 PASS INDEL;BAVGPOST=0.986;BRSQ=0.970;LDAF=0.3126;AVGPOST=0.9721;RSQ=0.9526;ERATE=0.0062;THETA=0.0009;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 179217438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0052;AVGPOST=0.9955;RSQ=0.6859;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179217448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3121;AVGPOST=0.9967;RSQ=0.9939;ERATE=0.0008;THETA=0.0002;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 179217451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0036;AVGPOST=0.9998;RSQ=0.9718;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179217543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.974;LDAF=0.1607;AVGPOST=0.9910;RSQ=0.9748;ERATE=0.0003;THETA=0.0009;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 179217554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0422;AVGPOST=0.9979;RSQ=0.9812;ERATE=0.0003;THETA=0.0007;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 179217582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3136;AVGPOST=0.9941;RSQ=0.9897;ERATE=0.0009;THETA=0.0002;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 179217642 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0065;AVGPOST=0.9956;RSQ=0.7499;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179217734 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0126;AVGPOST=0.9994;RSQ=0.9778;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179217837 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6027;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179217875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0172;AVGPOST=0.9992;RSQ=0.9779;ERATE=0.0004;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179217930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9794;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179217931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6019;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179217934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.4938;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179218002 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7330;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179218039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6088;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179218046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.4981;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179218102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.636;LDAF=0.0066;AVGPOST=0.9976;RSQ=0.8592;ERATE=0.0005;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179218394 . AAAG A 205 PASS INDEL;BAVGPOST=0.997;BRSQ=0.709;LDAF=0.0041;AVGPOST=0.9973;RSQ=0.7458;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179218442 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179218449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5403;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179218451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.7036;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179218470 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179218587 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0569;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0002;THETA=0.0025;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 179218754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6436;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179218799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4644;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179218846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.4499;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179218856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.578;LDAF=0.0112;AVGPOST=0.9884;RSQ=0.6020;ERATE=0.0008;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179219163 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.482;LDAF=0.0601;AVGPOST=0.9179;RSQ=0.4165;ERATE=0.0109;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 179219345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.480;LDAF=0.0039;AVGPOST=0.9971;RSQ=0.6812;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179219625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.482;LDAF=0.0041;AVGPOST=0.9956;RSQ=0.5685;ERATE=0.0006;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179219655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.600;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5714;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179219779 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0569;AVGPOST=0.9971;RSQ=0.9785;ERATE=0.0002;THETA=0.0003;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 179219781 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5678;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179219792 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0590;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 179219932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0595;AVGPOST=0.9952;RSQ=0.9612;ERATE=0.0008;THETA=0.0005;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 179220006 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.975;LDAF=0.0749;AVGPOST=0.9926;RSQ=0.9589;ERATE=0.0005;THETA=0.0005;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 179220092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.846;LDAF=0.0087;AVGPOST=0.9973;RSQ=0.8747;ERATE=0.0004;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179220176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179220196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7986;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179220199 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9822;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179220285 . ATC A 178 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0139;AVGPOST=0.9964;RSQ=0.9063;ERATE=0.0002;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179220286 . TCTC T 3107 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0152;AVGPOST=0.9990;RSQ=0.9749;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179220334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5682;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179220404 . T TA 1072 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9456;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179220465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9161;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179220708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0058;AVGPOST=0.9986;RSQ=0.9067;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179220734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7107;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179220830 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.905;LDAF=0.0216;AVGPOST=0.9975;RSQ=0.9538;ERATE=0.0002;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179220878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3138;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0006;THETA=0.0002;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 179220886 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179220921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0171;AVGPOST=0.9996;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179220951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6696;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179221217 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4828;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179221254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9368;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179221285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5611;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179221304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6320;ERATE=0.0012;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179221473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179221529 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0002;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179221728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.694;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7165;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179221806 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0131;AVGPOST=0.9982;RSQ=0.9470;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179221829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0771;AVGPOST=0.9968;RSQ=0.9826;ERATE=0.0003;THETA=0.0001;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 179221848 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5770;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179221928 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0869;AVGPOST=0.9989;RSQ=0.9947;ERATE=0.0002;THETA=0.0003;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 179221937 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0176;AVGPOST=0.9986;RSQ=0.9765;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179221998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6494;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179222005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0431;AVGPOST=0.9996;RSQ=0.9959;ERATE=0.0003;THETA=0.0007;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 179222164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7234;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179222208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179222335 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0002;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179222406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7658;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179222526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4868;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179222626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6087;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179222733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179222740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7496;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179222818 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8329;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179222840 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3886;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0003;THETA=0.0006;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 179222882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0127;AVGPOST=0.9981;RSQ=0.9487;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179222899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5346;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179223115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4972;AVGPOST=0.9962;RSQ=0.9936;ERATE=0.0008;THETA=0.0005;AC=1088;AN=2184 GT:DS:GL:BD 0.49816850 0
1 179223236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0052;AVGPOST=0.9952;RSQ=0.6742;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179223470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179223504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0129;AVGPOST=0.9996;RSQ=0.9850;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179223510 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8864;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179223598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179223683 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7718;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179223726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3884;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 179223751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3884;AVGPOST=0.9964;RSQ=0.9945;ERATE=0.0005;THETA=0.0004;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 179223780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.8901;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179223797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179223837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0425;AVGPOST=0.9984;RSQ=0.9841;ERATE=0.0003;THETA=0.0006;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 179223925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0768;AVGPOST=0.9987;RSQ=0.9920;ERATE=0.0003;THETA=0.0002;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 179223942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.961;LDAF=0.1674;AVGPOST=0.9826;RSQ=0.9538;ERATE=0.0005;THETA=0.0007;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 179224063 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8723;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179224067 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3880;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 179224072 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0207;AVGPOST=0.9993;RSQ=0.9849;ERATE=0.0003;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179224180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3891;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0007;THETA=0.0005;AC=851;AN=2184 GT:DS:GL:BD 0.38965201 0
1 179224189 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179224310 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8724;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179224401 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179224625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0063;AVGPOST=0.9987;RSQ=0.9262;ERATE=0.0002;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179224638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179224740 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179224861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3888;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=850;AN=2184 GT:DS:GL:BD 0.38919413 0
1 179224916 . GA G 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5169;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179224923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.944;LDAF=0.0133;AVGPOST=0.9981;RSQ=0.9437;ERATE=0.0016;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179224948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6784;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179225112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8130;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179225113 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8963;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179225542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6865;ERATE=0.0003;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179225583 . G GT 625 PASS INDEL;BAVGPOST=0.951;BRSQ=0.614;LDAF=0.0796;AVGPOST=0.9704;RSQ=0.8275;ERATE=0.0031;THETA=0.0005;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 179225584 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.974;LDAF=0.0728;AVGPOST=0.9948;RSQ=0.9695;ERATE=0.0006;THETA=0.0005;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 179225589 . G GC 912 PASS INDEL;BAVGPOST=0.979;BRSQ=0.585;LDAF=0.0364;AVGPOST=0.9625;RSQ=0.5877;ERATE=0.0026;THETA=0.0047;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179225596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.942;LDAF=0.0896;AVGPOST=0.9950;RSQ=0.9735;ERATE=0.0003;THETA=0.0010;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 179225667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8593;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179225878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6143;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179225906 . A AT 3155 PASS INDEL;BAVGPOST=0.928;BRSQ=0.686;LDAF=0.2010;AVGPOST=0.8055;RSQ=0.5430;ERATE=0.0223;THETA=0.0025;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 179225909 rs71812619 TA T 60904 PASS INDEL;BAVGPOST=0.954;BRSQ=0.606;LDAF=0.8876;AVGPOST=0.8811;RSQ=0.5198;ERATE=0.0237;THETA=0.0005;AC=2020;AN=2184 GT:DS:GL:BD 0.92490840 1
1 179225912 . TTA T 1575 PASS INDEL;BAVGPOST=0.977;BRSQ=0.850;LDAF=0.0971;AVGPOST=0.9540;RSQ=0.7994;ERATE=0.0047;THETA=0.0016;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 179225917 . T TTA 2078 PASS INDEL;BAVGPOST=0.973;BRSQ=0.829;LDAF=0.0866;AVGPOST=0.9692;RSQ=0.8457;ERATE=0.0023;THETA=0.0056;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 179225973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.610;LDAF=0.0051;AVGPOST=0.9927;RSQ=0.4742;ERATE=0.0009;THETA=0.0064;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179225993 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.510;LDAF=0.9698;AVGPOST=0.9692;RSQ=0.6112;ERATE=0.0032;THETA=0.0008;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 179226067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0179;AVGPOST=0.9964;RSQ=0.9256;ERATE=0.0005;THETA=0.0008;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179226096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0038;AVGPOST=0.9969;RSQ=0.6698;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179226201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4251;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179226210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9834;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179226510 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0250;AVGPOST=0.9992;RSQ=0.9896;ERATE=0.0002;THETA=0.0027;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179226525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5599;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179226551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8537;AVGPOST=0.9977;RSQ=0.9926;ERATE=0.0004;THETA=0.0082;AC=1864;AN=2184 GT:DS:GL:BD 0.85347986 1
1 179226626 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6764;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179226742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6819;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179226827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0064;AVGPOST=0.9953;RSQ=0.7245;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179226995 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.8163;AVGPOST=0.9952;RSQ=0.9866;ERATE=0.0006;THETA=0.0005;AC=1784;AN=2184 GT:DS:GL:BD 0.81684983 1
1 179227050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5277;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179227149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0201;AVGPOST=0.9997;RSQ=0.9923;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 179227309 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0072;AVGPOST=0.9972;RSQ=0.8606;ERATE=0.0002;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179227344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9669;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179227401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8163;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179227519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7100;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179227720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179227765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9679;ERATE=0.0002;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179227845 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2641;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0002;THETA=0.0002;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 179228078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.8043;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179228130 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0130;AVGPOST=0.9984;RSQ=0.9471;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179228188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2264;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0006;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 179228326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179228330 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0114;AVGPOST=0.9997;RSQ=0.9889;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179228375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0197;AVGPOST=0.9945;RSQ=0.8963;ERATE=0.0008;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179228396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2448;AVGPOST=0.9980;RSQ=0.9956;ERATE=0.0005;THETA=0.0007;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 179228449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4734;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179228450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.553;LDAF=0.0031;AVGPOST=0.9959;RSQ=0.4913;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179228473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9373;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179228474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8281;AVGPOST=0.9959;RSQ=0.9874;ERATE=0.0004;THETA=0.0005;AC=1810;AN=2184 GT:DS:GL:BD 0.82875460 1
1 179228511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0188;AVGPOST=0.9977;RSQ=0.9536;ERATE=0.0005;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179228607 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.961;LDAF=0.2578;AVGPOST=0.9934;RSQ=0.9875;ERATE=0.0008;THETA=0.0005;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 179228634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9587;ERATE=0.0003;THETA=0.0044;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179228659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0049;AVGPOST=0.9989;RSQ=0.9135;ERATE=0.0004;THETA=0.0038;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179228802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9664;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179228937 . AAAAG A 854 PASS INDEL;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0165;AVGPOST=0.9986;RSQ=0.9603;ERATE=0.0006;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179228938 . AAAG A 906 PASS INDEL;BAVGPOST=0.996;BRSQ=0.891;LDAF=0.0198;AVGPOST=0.9946;RSQ=0.8864;ERATE=0.0009;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179228965 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5600;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179229074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0161;AVGPOST=0.9995;RSQ=0.9870;ERATE=0.0003;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179229088 . GT G 96 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9952;RSQ=0.5238;ERATE=0.0013;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179229096 . T TA 229 PASS INDEL;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7403;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179229133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5548;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179229226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6776;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179229255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0122;AVGPOST=0.9993;RSQ=0.9739;ERATE=0.0002;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179229293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0173;AVGPOST=0.9973;RSQ=0.9436;ERATE=0.0004;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179229294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0256;AVGPOST=0.9983;RSQ=0.9729;ERATE=0.0003;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179229360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0091;AVGPOST=0.9925;RSQ=0.7027;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179229394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.620;LDAF=0.0048;AVGPOST=0.9960;RSQ=0.6748;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179229440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9388;ERATE=0.0005;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179229568 . C CA 84 PASS INDEL;BAVGPOST=0.981;BRSQ=0.566;LDAF=0.0371;AVGPOST=0.9501;RSQ=0.4556;ERATE=0.0114;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 179229577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3602;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179229696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179229720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179229721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2267;AVGPOST=0.9980;RSQ=0.9952;ERATE=0.0004;THETA=0.0002;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 179229746 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0132;AVGPOST=0.9981;RSQ=0.9450;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179229748 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0191;AVGPOST=0.9953;RSQ=0.9048;ERATE=0.0015;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179229803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8765;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179229809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5311;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179229822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9878;ERATE=0.0002;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179229841 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7410;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179229848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.8969;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179229884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5375;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179230043 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0002;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179230111 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179230130 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9902;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179230178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8927;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179230238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7070;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179230242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179230247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0160;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0002;THETA=0.0015;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179230378 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179230466 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0161;AVGPOST=0.9997;RSQ=0.9908;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179230475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1473;AVGPOST=0.9983;RSQ=0.9939;ERATE=0.0004;THETA=0.0003;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 179230490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=0.9980;RSQ=0.8530;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179230499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9664;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179230543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6417;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179230593 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0132;AVGPOST=0.9984;RSQ=0.9515;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179230604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5324;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179230668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0055;AVGPOST=0.9976;RSQ=0.8399;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179230696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.971;LDAF=0.2281;AVGPOST=0.9938;RSQ=0.9865;ERATE=0.0009;THETA=0.0005;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 179230743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9275;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179230797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0263;AVGPOST=0.9973;RSQ=0.9618;ERATE=0.0004;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179230799 . T TC 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179230842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7828;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179230875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6536;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179230894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179230950 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4939;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179230958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0160;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179231004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6105;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179231021 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7375;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179231170 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179231197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9997;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179231370 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6288;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179231385 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9940;AVGPOST=0.9993;RSQ=0.9444;ERATE=0.0003;THETA=0.0006;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 179231386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0015;AVGPOST=0.9977;RSQ=0.4406;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179231545 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.690;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179231623 rs10667726 C CCTT 131908 PASS INDEL;BAVGPOST=0.991;BRSQ=0.967;LDAF=0.8431;AVGPOST=0.9899;RSQ=0.9703;ERATE=0.0006;THETA=0.0016;AC=1842;AN=2184 GT:DS:GL:BD 0.84340662 1
1 179231645 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179231657 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2261;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 179231702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0615;AVGPOST=0.9945;RSQ=0.9631;ERATE=0.0004;THETA=0.0010;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 179231730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5611;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179231732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0002;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179231738 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179231790 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7820;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179231792 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5849;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179231878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0763;AVGPOST=0.9957;RSQ=0.9753;ERATE=0.0004;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 179231881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7763;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179231919 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0187;AVGPOST=0.9983;RSQ=0.9714;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179232066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9324;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179232077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2579;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 179232210 rs11430370 C CA 21707 PASS INDEL;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2258;AVGPOST=0.9980;RSQ=0.9953;ERATE=0.0005;THETA=0.0002;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 179232250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.906;LDAF=0.0185;AVGPOST=0.9968;RSQ=0.9246;ERATE=0.0004;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179232352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.8331;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179232361 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179232377 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9677;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179232384 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0259;AVGPOST=0.9985;RSQ=0.9750;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179232487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0181;AVGPOST=0.9992;RSQ=0.9838;ERATE=0.0002;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179232641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4797;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179232691 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6669;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179232848 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0132;AVGPOST=0.9996;RSQ=0.9877;ERATE=0.0002;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179232950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179232959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2261;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 179233029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0609;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0002;THETA=0.0002;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 179233060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179233083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0844;AVGPOST=0.9986;RSQ=0.9921;ERATE=0.0003;THETA=0.0001;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 179233087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9989;RSQ=0.9583;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179233088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0303;AVGPOST=0.9996;RSQ=0.9944;ERATE=0.0003;THETA=0.0002;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 179233144 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9775;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179233163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0002;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179233214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0609;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 179233342 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.6083;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179233440 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7384;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179233664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8913;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179233747 . ACACG A 227 PASS INDEL;BAVGPOST=0.993;BRSQ=0.855;LDAF=0.0393;AVGPOST=0.9758;RSQ=0.7593;ERATE=0.0015;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 179233749 . ACG A 1930 PASS INDEL;BAVGPOST=0.985;BRSQ=0.773;LDAF=0.0442;AVGPOST=0.9665;RSQ=0.6951;ERATE=0.0076;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 179234045 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2442;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0003;THETA=0.0001;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 179234236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5699;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179234327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9865;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179234374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0025;AVGPOST=0.9966;RSQ=0.5212;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179234381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.553;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.5758;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179234462 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0154;AVGPOST=0.9993;RSQ=0.9829;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179234478 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2401;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0004;THETA=0.0010;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 179234573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179234736 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8662;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179234800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9535;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179234938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9942;ERATE=0.0002;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179234948 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4734;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179235049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.7887;AVGPOST=0.9852;RSQ=0.9639;ERATE=0.0018;THETA=0.0005;AC=1731;AN=2184 GT:DS:GL:BD 0.79258239 1
1 179235304 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.832;LDAF=0.0192;AVGPOST=0.9835;RSQ=0.6787;ERATE=0.0023;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179235306 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8306;ERATE=0.0005;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179235355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9792;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179235454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0264;AVGPOST=0.9969;RSQ=0.9484;ERATE=0.0005;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179235504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7235;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179235625 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0468;AVGPOST=0.9978;RSQ=0.9802;ERATE=0.0004;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 179235731 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8659;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179235848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0036;AVGPOST=0.9958;RSQ=0.5262;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179235979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0050;AVGPOST=0.9985;RSQ=0.8811;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179236024 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8226;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179236048 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6552;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179236177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0066;AVGPOST=0.9946;RSQ=0.6995;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179236197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0182;AVGPOST=0.9993;RSQ=0.9834;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179236307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0002;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179236331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9912;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179236417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9842;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179236461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0053;AVGPOST=0.9988;RSQ=0.9024;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179236507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3885;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179236509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0311;AVGPOST=0.9983;RSQ=0.9802;ERATE=0.0003;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 179236516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.6012;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179236555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0155;AVGPOST=0.9984;RSQ=0.9612;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179236569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0110;AVGPOST=0.9941;RSQ=0.7987;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179236579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.976;LDAF=0.0739;AVGPOST=0.9900;RSQ=0.9487;ERATE=0.0004;THETA=0.0003;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 179236643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.5013;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179236647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.473;LDAF=0.0060;AVGPOST=0.9919;RSQ=0.4161;ERATE=0.0008;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179236814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3717;AVGPOST=0.9956;RSQ=0.9917;ERATE=0.0003;THETA=0.0003;AC=811;AN=2184 GT:DS:GL:BD 0.37133700 0
1 179236834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0080;AVGPOST=0.9961;RSQ=0.8238;ERATE=0.0005;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179236835 . TC T 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179237228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179237279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0043;AVGPOST=0.9975;RSQ=0.7500;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179237341 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5773;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179237385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.716;LDAF=0.0118;AVGPOST=0.9892;RSQ=0.6597;ERATE=0.0009;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179237607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5726;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179237644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6950;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179237694 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9995;RSQ=0.9831;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179237747 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179237806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0182;AVGPOST=0.9993;RSQ=0.9833;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179237933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9844;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179237939 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9143;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179238268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9738;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179238359 . T TC 167 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5864;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179238386 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.788;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7730;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179238546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179238761 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179238793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179238806 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179238955 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179239030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0002;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179239045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179239155 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0079;AVGPOST=0.9993;RSQ=0.9562;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179239160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179239244 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8455;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0003;THETA=0.0001;AC=1847;AN=2184 GT:DS:GL:BD 0.84569597 1
1 179239574 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179239615 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0074;AVGPOST=0.9987;RSQ=0.9247;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179239726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6115;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179239761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179239774 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179239796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5114;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179239797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.544;LDAF=0.9661;AVGPOST=0.9601;RSQ=0.5309;ERATE=0.0072;THETA=0.0003;AC=2134;AN=2184 GT:DS:GL:BD 0.97710621 1
1 179239817 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5876;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179239864 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7459;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179239998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0250;AVGPOST=0.9988;RSQ=0.9848;ERATE=0.0002;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179240035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9997;RSQ=0.9902;ERATE=0.0002;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179240051 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0002;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179240086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179240141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9994;RSQ=0.9878;ERATE=0.0002;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179240174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0194;AVGPOST=0.9990;RSQ=0.9827;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179240190 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179240206 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4442;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=970;AN=2184 GT:DS:GL:BD 0.44413918 0
1 179240231 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179240291 . GTGT G 1149 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8671;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179240296 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179240340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179240405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1468;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179240407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8450;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0002;THETA=0.0005;AC=1846;AN=2184 GT:DS:GL:BD 0.84523809 1
1 179240408 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179240659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6441;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179240758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0146;AVGPOST=0.9978;RSQ=0.9327;ERATE=0.0006;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179240759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0161;AVGPOST=0.9978;RSQ=0.9361;ERATE=0.0007;THETA=0.0012;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179240881 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4275;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179240912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9441;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179240974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179240979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0253;AVGPOST=0.9990;RSQ=0.9866;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179241009 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1044;AVGPOST=0.9994;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 179241057 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4229;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179241077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0139;AVGPOST=0.9994;RSQ=0.9808;ERATE=0.0005;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179241144 . CA C 1248 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9986;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179241174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5332;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179241182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.529;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5131;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179241284 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179241382 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8470;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179241431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179241477 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0209;AVGPOST=0.9970;RSQ=0.9480;ERATE=0.0004;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179241499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179241507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179241514 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=0.9997;RSQ=0.9808;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179241567 . AG A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5924;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179241607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8411;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179241707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8794;ERATE=0.0002;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179241727 . TTA T 52 PASS INDEL;BAVGPOST=0.995;BRSQ=0.500;LDAF=0.0133;AVGPOST=0.9836;RSQ=0.5143;ERATE=0.0017;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179241800 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0358;AVGPOST=0.9958;RSQ=0.9490;ERATE=0.0003;THETA=0.0002;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 179241820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7172;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179241925 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8466;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179242052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9510;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179242136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1349;AVGPOST=0.9983;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 179242140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1057;AVGPOST=0.9978;RSQ=0.9931;ERATE=0.0003;THETA=0.0001;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 179242218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9281;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179242230 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7550;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179242420 . GTGTT G 2102 PASS INDEL;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0186;AVGPOST=0.9986;RSQ=0.9711;ERATE=0.0004;THETA=0.0001;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179242491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0285;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0002;THETA=0.0022;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179242514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9583;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179242536 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7901;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179242583 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179242639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.7141;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179242681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.780;LDAF=0.0038;AVGPOST=0.9970;RSQ=0.7256;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179242684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9880;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179242746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9805;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179242916 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9799;ERATE=0.0002;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179242919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6597;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179243008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8817;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179243033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0292;AVGPOST=0.9979;RSQ=0.9707;ERATE=0.0006;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179243060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4779;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179243063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.671;LDAF=0.0030;AVGPOST=0.9979;RSQ=0.6924;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179243208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1042;AVGPOST=0.9991;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 179243252 rs79191344 G GTAAA 36346 PASS INDEL;BAVGPOST=0.989;BRSQ=0.976;LDAF=0.3550;AVGPOST=0.9839;RSQ=0.9716;ERATE=0.0018;THETA=0.0002;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 179243426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.694;LDAF=0.0060;AVGPOST=0.9958;RSQ=0.7364;ERATE=0.0008;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179243527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.651;LDAF=0.0120;AVGPOST=0.9848;RSQ=0.4868;ERATE=0.0023;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179243560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.650;LDAF=0.0611;AVGPOST=0.9399;RSQ=0.5974;ERATE=0.0094;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 179243796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0181;AVGPOST=0.9992;RSQ=0.9793;ERATE=0.0004;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179243809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0327;AVGPOST=0.9994;RSQ=0.9915;ERATE=0.0003;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 179244018 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8230;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179244241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0046;AVGPOST=0.9962;RSQ=0.6914;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179244329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5641;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179244356 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0190;AVGPOST=0.9985;RSQ=0.9658;ERATE=0.0006;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179244406 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0197;AVGPOST=0.9973;RSQ=0.9507;ERATE=0.0005;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 179244437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0132;AVGPOST=0.9984;RSQ=0.9520;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179244440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0002;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179244625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7428;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179244681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9664;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179244707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179244723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3796;AVGPOST=0.9961;RSQ=0.9931;ERATE=0.0006;THETA=0.0004;AC=828;AN=2184 GT:DS:GL:BD 0.37912089 0
1 179244750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2253;AVGPOST=0.9975;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 179244934 rs76996991 T TC 124001 PASS INDEL;BAVGPOST=1.000;BRSQ=0;LDAF=0.9990;AVGPOST=0.9980;RSQ=0.2280;ERATE=0.0004;THETA=0.0001;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 179244987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8454;AVGPOST=0.9959;RSQ=0.9886;ERATE=0.0004;THETA=0.0003;AC=1850;AN=2184 GT:DS:GL:BD 0.84706962 1
1 179245036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9996;RSQ=0.9907;ERATE=0.0003;THETA=0.0001;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179245108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0073;AVGPOST=0.9996;RSQ=0.9752;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179245214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9919;ERATE=0.0002;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179245290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0607;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0002;THETA=0.0004;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 179245377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3609;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179245410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.832;LDAF=0.0108;AVGPOST=0.9963;RSQ=0.8547;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179245533 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.976;LDAF=0.4498;AVGPOST=0.9888;RSQ=0.9822;ERATE=0.0012;THETA=0.0002;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 179245565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.902;LDAF=0.7935;AVGPOST=0.8848;RSQ=0.7328;ERATE=0.0154;THETA=0.0003;AC=1779;AN=2184 GT:DS:GL:BD 0.81456041 1
1 179245589 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.6699;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179245620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7441;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179245667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7759;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179245687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8968;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179245758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8455;AVGPOST=0.9978;RSQ=0.9923;ERATE=0.0006;THETA=0.0007;AC=1847;AN=2184 GT:DS:GL:BD 0.84569597 1
1 179245876 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.7997;AVGPOST=0.9491;RSQ=0.8791;ERATE=0.0060;THETA=0.0004;AC=1769;AN=2184 GT:DS:GL:BD 0.80998170 1
1 179245883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.951;LDAF=0.2936;AVGPOST=0.9702;RSQ=0.9457;ERATE=0.0030;THETA=0.0005;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 179245941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0142;AVGPOST=0.9988;RSQ=0.9600;ERATE=0.0005;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179245942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.897;LDAF=0.7303;AVGPOST=0.9005;RSQ=0.7982;ERATE=0.0148;THETA=0.0003;AC=1638;AN=2184 GT:DS:GL:BD 0.75000000 1
1 179246060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.973;LDAF=0.0667;AVGPOST=0.9935;RSQ=0.9562;ERATE=0.0010;THETA=0.0004;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 179246076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0157;AVGPOST=0.9989;RSQ=0.9685;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179246098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0160;AVGPOST=0.9983;RSQ=0.9560;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179246183 rs113179797 AT A 1131 PASS INDEL;BAVGPOST=0.996;BRSQ=0.889;LDAF=0.0288;AVGPOST=0.9766;RSQ=0.7079;ERATE=0.0029;THETA=0.0010;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 179246278 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179246584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0105;AVGPOST=0.9986;RSQ=0.9489;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179246707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9562;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179246861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0269;AVGPOST=0.9990;RSQ=0.9843;ERATE=0.0003;THETA=0.0083;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 179246881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6671;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179246941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.471;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5280;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179247035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0146;AVGPOST=0.9918;RSQ=0.7850;ERATE=0.0004;THETA=0.0042;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179247351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.657;LDAF=0.0036;AVGPOST=0.9966;RSQ=0.6734;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179247494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.926;LDAF=0.3753;AVGPOST=0.9836;RSQ=0.9744;ERATE=0.0008;THETA=0.0005;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 179247576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.417;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.3799;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179247788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9940;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0003;THETA=0.0002;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 179247802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9988;RSQ=0.9631;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179247818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0259;AVGPOST=0.9977;RSQ=0.9723;ERATE=0.0004;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179248230 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0179;AVGPOST=0.9991;RSQ=0.9771;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179248265 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9996;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179248274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9380;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179248311 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179248391 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179248429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179248432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0130;AVGPOST=0.9992;RSQ=0.9731;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179248439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179248440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0104;AVGPOST=0.9986;RSQ=0.9507;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179248508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0167;AVGPOST=0.9986;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179248653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1366;AVGPOST=0.9970;RSQ=0.9897;ERATE=0.0010;THETA=0.0004;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 179248766 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2734;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0004;THETA=0.0003;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 179248804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179248815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2272;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0002;THETA=0.0003;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 179248819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179248952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3814;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=834;AN=2184 GT:DS:GL:BD 0.38186812 0
1 179249052 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.854;LDAF=0.0066;AVGPOST=0.9983;RSQ=0.9110;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179249079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9981;RSQ=0.9633;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179249117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.753;LDAF=0.0239;AVGPOST=0.9893;RSQ=0.8430;ERATE=0.0010;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 179249199 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.896;LDAF=0.9688;AVGPOST=0.9915;RSQ=0.9030;ERATE=0.0009;THETA=0.0004;AC=2119;AN=2184 GT:DS:GL:BD 0.97023809 1
1 179249200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.5848;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179249216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0048;AVGPOST=0.9971;RSQ=0.7684;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179249238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.5761;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179249316 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0149;AVGPOST=0.9964;RSQ=0.9081;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179249358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.3775;AVGPOST=0.9957;RSQ=0.9931;ERATE=0.0004;THETA=0.0006;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 179249444 MERGED_DEL_2_6428 T <DEL> . . SV;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0030;CIEND=-17,33;CIPOS=-18,19;END=179266534;SOURCE=GenomeStrip_179249444_179266534;SVTYPE=DEL;AC=1;AN GT:DS:GL:BD 0.00045788 0
1 179249450 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0713;AVGPOST=0.9968;RSQ=0.9825;ERATE=0.0003;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 179249537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5559;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179249538 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.3794;AVGPOST=0.9946;RSQ=0.9911;ERATE=0.0006;THETA=0.0005;AC=832;AN=2184 GT:DS:GL:BD 0.38095239 0
1 179249575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0128;AVGPOST=0.9976;RSQ=0.9305;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179249760 . AG A 1027 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9715;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179249829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.865;LDAF=0.0172;AVGPOST=0.9959;RSQ=0.8958;ERATE=0.0005;THETA=0.0010;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179249862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179249891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1470;AVGPOST=0.9986;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179249946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0646;AVGPOST=0.9974;RSQ=0.9828;ERATE=0.0004;THETA=0.0013;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 179249955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1505;AVGPOST=0.9978;RSQ=0.9926;ERATE=0.0004;THETA=0.0004;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 179249956 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.546;LDAF=0.0053;AVGPOST=0.9958;RSQ=0.6988;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179249960 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.966;LDAF=0.4431;AVGPOST=0.9755;RSQ=0.9631;ERATE=0.0055;THETA=0.0003;AC=965;AN=2184 GT:DS:GL:BD 0.44184983 0
1 179249964 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6782;ERATE=0.0007;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179250143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0130;AVGPOST=0.9997;RSQ=0.9891;ERATE=0.0002;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179250203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0048;AVGPOST=0.9991;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179250244 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0005;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179250275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5198;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179250330 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7807;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179250388 . AT A 2267 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0225;AVGPOST=0.9993;RSQ=0.9865;ERATE=0.0004;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 179250407 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7462;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179250503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0038;AVGPOST=0.9985;RSQ=0.8580;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179250550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6541;ERATE=0.0003;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179250734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.568;LDAF=0.0033;AVGPOST=0.9951;RSQ=0.4240;ERATE=0.0008;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179250833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1511;AVGPOST=0.9947;RSQ=0.9834;ERATE=0.0004;THETA=0.0007;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 179250884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0044;AVGPOST=0.9971;RSQ=0.7473;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179250921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.2474;AVGPOST=0.9938;RSQ=0.9877;ERATE=0.0005;THETA=0.0008;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 179250928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.864;LDAF=0.0121;AVGPOST=0.9966;RSQ=0.9030;ERATE=0.0005;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179250961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5396;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179250968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0149;AVGPOST=0.9968;RSQ=0.9119;ERATE=0.0004;THETA=0.0017;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179251030 . A AAAC 694 PASS INDEL;BAVGPOST=0.976;BRSQ=0.607;LDAF=0.0479;AVGPOST=0.9433;RSQ=0.5247;ERATE=0.0058;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179251044 . C CA 1057 PASS INDEL;BAVGPOST=0.970;BRSQ=0.655;LDAF=0.0628;AVGPOST=0.9356;RSQ=0.5569;ERATE=0.0250;THETA=0.0015;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 179251054 . C CA 251 PASS INDEL;BAVGPOST=0.995;BRSQ=0.766;LDAF=0.0113;AVGPOST=0.9884;RSQ=0.5967;ERATE=0.0020;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179251073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0167;AVGPOST=0.9989;RSQ=0.9759;ERATE=0.0003;THETA=0.0021;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179251106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0070;AVGPOST=0.9981;RSQ=0.8809;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179251290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.944;LDAF=0.2215;AVGPOST=0.9836;RSQ=0.9655;ERATE=0.0014;THETA=0.0005;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 179251382 . G GA 512 PASS INDEL;BAVGPOST=0.991;BRSQ=0.639;LDAF=0.0230;AVGPOST=0.9739;RSQ=0.5395;ERATE=0.0056;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179251400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179251497 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9453;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179251572 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179251583 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9528;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179251673 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1299;AVGPOST=0.9967;RSQ=0.9893;ERATE=0.0004;THETA=0.0026;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 179251721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.802;LDAF=0.0089;AVGPOST=0.9960;RSQ=0.8178;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179251731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0159;AVGPOST=0.9968;RSQ=0.9174;ERATE=0.0004;THETA=0.0010;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179251753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8274;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179251815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.385;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4484;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179251850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0066;AVGPOST=0.9957;RSQ=0.7635;ERATE=0.0005;THETA=0.0052;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179251873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8279;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179251874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.738;LDAF=0.0084;AVGPOST=0.9928;RSQ=0.6777;ERATE=0.0006;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179251879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5576;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179252066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.850;LDAF=0.0215;AVGPOST=0.9949;RSQ=0.9160;ERATE=0.0005;THETA=0.0027;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179252092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0172;AVGPOST=0.9954;RSQ=0.9061;ERATE=0.0004;THETA=0.0009;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179252097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.962;LDAF=0.5924;AVGPOST=0.9620;RSQ=0.9420;ERATE=0.0023;THETA=0.0006;AC=1303;AN=2184 GT:DS:GL:BD 0.59661174 1
1 179252128 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0065;AVGPOST=0.9975;RSQ=0.8577;ERATE=0.0003;THETA=0.0074;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179252130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0186;AVGPOST=0.9984;RSQ=0.9627;ERATE=0.0003;THETA=0.0191;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179252260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7594;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179252293 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4022;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179252351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.959;LDAF=0.0615;AVGPOST=0.9907;RSQ=0.9497;ERATE=0.0003;THETA=0.0005;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 179252353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.955;LDAF=0.0616;AVGPOST=0.9906;RSQ=0.9474;ERATE=0.0006;THETA=0.0045;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 179252361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.959;LDAF=0.0618;AVGPOST=0.9927;RSQ=0.9590;ERATE=0.0004;THETA=0.0118;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 179252398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8410;ERATE=0.0003;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179252416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7008;ERATE=0.0004;THETA=0.0106;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179252540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.977;LDAF=0.1575;AVGPOST=0.9889;RSQ=0.9694;ERATE=0.0018;THETA=0.0026;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 179252549 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7049;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179252578 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0076;AVGPOST=0.9987;RSQ=0.9248;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179252592 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0194;AVGPOST=0.9981;RSQ=0.9638;ERATE=0.0002;THETA=0.0078;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179252759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5392;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179252831 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6132;ERATE=0.0002;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179252846 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5951;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179252968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0136;AVGPOST=0.9939;RSQ=0.8291;ERATE=0.0004;THETA=0.0032;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179253066 . T TTTG 2681 PASS INDEL;BAVGPOST=0.914;BRSQ=0.553;LDAF=0.1285;AVGPOST=0.8713;RSQ=0.5571;ERATE=0.0168;THETA=0.0055;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 179253067 . T TTG 1643 PASS INDEL;BAVGPOST=0.991;BRSQ=0.878;LDAF=0.0327;AVGPOST=0.9868;RSQ=0.8335;ERATE=0.0012;THETA=0.0099;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179253068 . T TG 676 PASS INDEL;BAVGPOST=0.996;BRSQ=0.903;LDAF=0.0250;AVGPOST=0.9960;RSQ=0.9359;ERATE=0.0005;THETA=0.0049;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179253127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.2221;AVGPOST=0.9884;RSQ=0.9746;ERATE=0.0010;THETA=0.0090;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 179253186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1380;AVGPOST=0.9920;RSQ=0.9752;ERATE=0.0009;THETA=0.0004;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 179253230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.641;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7775;ERATE=0.0003;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179253403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0048;AVGPOST=0.9958;RSQ=0.7131;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179253407 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0104;AVGPOST=0.9983;RSQ=0.9330;ERATE=0.0003;THETA=0.0025;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179253542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4783;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179253576 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9715;ERATE=0.0002;THETA=0.0016;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179253647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.8185;ERATE=0.0002;THETA=0.0037;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179253678 . TTG T 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4552;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179253687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0054;AVGPOST=0.9976;RSQ=0.8227;ERATE=0.0003;THETA=0.0019;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179253693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9436;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=2061;AN=2184 GT:DS:GL:BD 0.94368130 1
1 179253975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2911;AVGPOST=0.9943;RSQ=0.9886;ERATE=0.0009;THETA=0.0008;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 179253977 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179254092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179254110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9997;RSQ=0.9921;ERATE=0.0002;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179254130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.959;LDAF=0.0302;AVGPOST=0.9980;RSQ=0.9775;ERATE=0.0003;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 179254144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2180;AVGPOST=0.9979;RSQ=0.9954;ERATE=0.0004;THETA=0.0008;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 179254223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0221;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 179254245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.9452;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0002;THETA=0.0006;AC=2064;AN=2184 GT:DS:GL:BD 0.94505495 1
1 179254261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5861;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179254269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.926;LDAF=0.0323;AVGPOST=0.9961;RSQ=0.9476;ERATE=0.0004;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 179254351 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.972;LDAF=0.2159;AVGPOST=0.9928;RSQ=0.9845;ERATE=0.0008;THETA=0.0009;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 179254462 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0043;AVGPOST=0.9975;RSQ=0.7484;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179254467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.2236;AVGPOST=0.9957;RSQ=0.9905;ERATE=0.0004;THETA=0.0004;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 179254542 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9979;RSQ=0.9642;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179254597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2176;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0006;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 179254622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7906;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179254675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5060;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179254737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0296;AVGPOST=0.9967;RSQ=0.9535;ERATE=0.0005;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179254742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.869;LDAF=0.0185;AVGPOST=0.9948;RSQ=0.8878;ERATE=0.0005;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179254779 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0262;AVGPOST=0.9984;RSQ=0.9729;ERATE=0.0004;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179254853 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5881;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179254905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9822;AVGPOST=0.9981;RSQ=0.9678;ERATE=0.0003;THETA=0.0004;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 179254909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8119;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179254965 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2174;AVGPOST=0.9964;RSQ=0.9923;ERATE=0.0006;THETA=0.0006;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 179254984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.951;LDAF=0.6777;AVGPOST=0.9565;RSQ=0.9341;ERATE=0.0104;THETA=0.0003;AC=1497;AN=2184 GT:DS:GL:BD 0.68543959 1
1 179255003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1353;AVGPOST=0.9964;RSQ=0.9868;ERATE=0.0006;THETA=0.0004;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 179255075 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.717;LDAF=0.0082;AVGPOST=0.9936;RSQ=0.6836;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179255137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0265;AVGPOST=0.9989;RSQ=0.9816;ERATE=0.0004;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179255140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.965;LDAF=0.6880;AVGPOST=0.9782;RSQ=0.9666;ERATE=0.0038;THETA=0.0002;AC=1511;AN=2184 GT:DS:GL:BD 0.69184983 1
1 179255209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2183;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0003;THETA=0.0001;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 179255354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7554;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179255380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179255387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179255423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2929;AVGPOST=0.9976;RSQ=0.9956;ERATE=0.0003;THETA=0.0006;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 179255427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0281;AVGPOST=0.9985;RSQ=0.9792;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179255478 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2918;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0003;THETA=0.0007;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 179255507 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0067;AVGPOST=0.9971;RSQ=0.8195;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179255518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0108;AVGPOST=0.9982;RSQ=0.9318;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179255572 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0236;AVGPOST=0.9984;RSQ=0.9684;ERATE=0.0005;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 179255573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.9841;AVGPOST=0.9914;RSQ=0.7794;ERATE=0.0016;THETA=0.0006;AC=2156;AN=2184 GT:DS:GL:BD 0.98717946 1
1 179255588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.939;LDAF=0.1367;AVGPOST=0.9907;RSQ=0.9675;ERATE=0.0012;THETA=0.0002;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 179255589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.898;LDAF=0.0136;AVGPOST=0.9947;RSQ=0.8396;ERATE=0.0008;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179255645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2179;AVGPOST=0.9968;RSQ=0.9924;ERATE=0.0010;THETA=0.0001;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 179255707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0072;AVGPOST=0.9980;RSQ=0.8950;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179255957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2167;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0005;THETA=0.0003;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 179256105 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0263;AVGPOST=0.9995;RSQ=0.9922;ERATE=0.0002;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179256209 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9829;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0003;THETA=0.0005;AC=2147;AN=2184 GT:DS:GL:BD 0.98305863 1
1 179256214 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.9797;AVGPOST=0.9950;RSQ=0.9203;ERATE=0.0005;THETA=0.0002;AC=2139;AN=2184 GT:DS:GL:BD 0.97939563 1
1 179256283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0199;AVGPOST=0.9979;RSQ=0.9557;ERATE=0.0005;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179256377 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0061;AVGPOST=0.9961;RSQ=0.7516;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179256423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.779;LDAF=0.0106;AVGPOST=0.9930;RSQ=0.7503;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179256515 . AGATG A 19137 PASS INDEL;BAVGPOST=0.981;BRSQ=0.952;LDAF=0.2139;AVGPOST=0.9915;RSQ=0.9806;ERATE=0.0025;THETA=0.0012;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 179256576 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179256650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2175;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0012;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 179256821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9069;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179256830 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0002;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179256928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179257086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0002;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179257184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9830;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0002;THETA=0.0003;AC=2147;AN=2184 GT:DS:GL:BD 0.98305863 1
1 179257186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179257213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179257375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0393;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0002;THETA=0.0009;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 179257385 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8582;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179257526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179257562 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2175;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0002;THETA=0.0004;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 179257594 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9489;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179257649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2180;AVGPOST=0.9976;RSQ=0.9951;ERATE=0.0004;THETA=0.0002;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 179257663 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.2915;AVGPOST=0.9921;RSQ=0.9851;ERATE=0.0011;THETA=0.0004;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 179257728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.638;LDAF=0.0043;AVGPOST=0.9980;RSQ=0.8091;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179257764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179258106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7465;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179258186 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6494;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179258190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7038;AVGPOST=0.9988;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=1538;AN=2184 GT:DS:GL:BD 0.70421243 1
1 179258254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179258266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7319;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179258270 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179258296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179258424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2165;AVGPOST=0.9983;RSQ=0.9964;ERATE=0.0004;THETA=0.0004;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 179258480 . GATA G 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5394;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179258507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2170;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 179258533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.853;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.8123;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179258577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8916;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179258678 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0223;AVGPOST=0.9992;RSQ=0.9848;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 179258818 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2178;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0005;THETA=0.0004;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 179258822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0113;AVGPOST=0.9992;RSQ=0.9676;ERATE=0.0003;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179258950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0105;AVGPOST=0.9987;RSQ=0.9489;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179258955 rs35892969 A AT 8049 PASS INDEL;BAVGPOST=0.952;BRSQ=0.882;LDAF=0.2518;AVGPOST=0.8931;RSQ=0.7870;ERATE=0.0215;THETA=0.0006;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 179259030 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.6968;AVGPOST=0.9884;RSQ=0.9820;ERATE=0.0016;THETA=0.0003;AC=1525;AN=2184 GT:DS:GL:BD 0.69826007 1
1 179259036 . G GC 1069 PASS INDEL;BAVGPOST=0.997;BRSQ=0.911;LDAF=0.0208;AVGPOST=0.9965;RSQ=0.9341;ERATE=0.0006;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179259076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0032;AVGPOST=0.9964;RSQ=0.5370;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179259095 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9751;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179259102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0233;AVGPOST=0.9991;RSQ=0.9830;ERATE=0.0003;THETA=0.0008;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 179259198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2230;AVGPOST=0.9963;RSQ=0.9916;ERATE=0.0004;THETA=0.0006;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 179259265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.924;LDAF=0.0225;AVGPOST=0.9988;RSQ=0.9759;ERATE=0.0005;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 179259434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0236;AVGPOST=0.9987;RSQ=0.9754;ERATE=0.0006;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 179259704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6574;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179259748 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9605;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179259823 . G GT 627 PASS INDEL;BAVGPOST=0.978;BRSQ=0.617;LDAF=0.0475;AVGPOST=0.9488;RSQ=0.5670;ERATE=0.0112;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 179259921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9122;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179260038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7388;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179260039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.8075;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179260106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5817;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179260175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9004;ERATE=0.0012;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179260235 . T TA 521 PASS INDEL;BAVGPOST=0.974;BRSQ=0.534;LDAF=0.0449;AVGPOST=0.9528;RSQ=0.5729;ERATE=0.0103;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 179260260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179260405 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0184;AVGPOST=0.9963;RSQ=0.9217;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179260520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179260723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9256;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179260730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179260732 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2177;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0004;THETA=0.0003;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 179260907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179261057 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179261069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.2431;AVGPOST=0.9978;RSQ=0.9951;ERATE=0.0005;THETA=0.0004;AC=530;AN=2184 GT:DS:GL:BD 0.24267399 0
1 179261114 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8221;AVGPOST=0.9982;RSQ=0.9949;ERATE=0.0005;THETA=0.0003;AC=1795;AN=2184 GT:DS:GL:BD 0.82188642 1
1 179261128 . ATTG A 2806 PASS INDEL;BAVGPOST=0.988;BRSQ=0.831;LDAF=0.0346;AVGPOST=0.9850;RSQ=0.8262;ERATE=0.0030;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 179261226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179261227 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2178;AVGPOST=0.9982;RSQ=0.9961;ERATE=0.0005;THETA=0.0005;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 179261253 . A AT 128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5693;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179261397 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179261410 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9102;ERATE=0.0003;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179261685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9689;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179261761 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2494;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 179261902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9894;AVGPOST=0.9996;RSQ=0.9872;ERATE=0.0002;THETA=0.0002;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 179261947 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179262018 . AT A 808 PASS INDEL;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0095;AVGPOST=0.9990;RSQ=0.9565;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179262133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4917;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179262180 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.3363;ERATE=0.0004;THETA=0.0027;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179262207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5194;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179262227 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0067;AVGPOST=0.9984;RSQ=0.8959;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179262250 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179262334 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2162;AVGPOST=0.9980;RSQ=0.9949;ERATE=0.0005;THETA=0.0003;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 179262392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7600;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179262481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9081;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179262673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7871;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179262681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8386;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179262872 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0301;AVGPOST=0.9928;RSQ=0.9053;ERATE=0.0007;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179262969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.6173;ERATE=0.0008;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179262982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0252;AVGPOST=0.9977;RSQ=0.9651;ERATE=0.0006;THETA=0.0008;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179263003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3226;AVGPOST=0.9932;RSQ=0.9873;ERATE=0.0012;THETA=0.0009;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 179263332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0110;AVGPOST=0.9993;RSQ=0.9720;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179263356 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2165;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0005;THETA=0.0003;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 179263380 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4508;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179263451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4403;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179263502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179263598 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8499;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179263691 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7648;ERATE=0.0012;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179263760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.534;LDAF=0.0046;AVGPOST=0.9965;RSQ=0.6962;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179263910 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0037;AVGPOST=0.9976;RSQ=0.7104;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179264022 . CT C 41 PASS INDEL;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0024;AVGPOST=0.9963;RSQ=0.4055;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179264249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179264282 . GCA G 1897 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0099;AVGPOST=0.9994;RSQ=0.9738;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179264291 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6082;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0004;THETA=0.0006;AC=1328;AN=2184 GT:DS:GL:BD 0.60805863 1
1 179264292 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179264374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0190;AVGPOST=0.9995;RSQ=0.9882;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179264397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3335;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 179264413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6920;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179264480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0170;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0002;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179264620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179264693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9328;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179264709 . A ATT 211 PASS INDEL;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5038;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179264764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0002;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 179264888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179264930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179264955 . TTTG T 5735 PASS INDEL;BAVGPOST=0.923;BRSQ=0.736;LDAF=0.7900;AVGPOST=0.8232;RSQ=0.5780;ERATE=0.0170;THETA=0.0006;AC=1792;AN=2184 GT:DS:GL:BD 0.82051283 1
1 179264993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0100;AVGPOST=0.9954;RSQ=0.8594;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179265002 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0041;AVGPOST=0.9930;RSQ=0.4020;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179265044 . T TC 6990 PASS INDEL;BAVGPOST=0.931;BRSQ=0.817;LDAF=0.7578;AVGPOST=0.8896;RSQ=0.7828;ERATE=0.0075;THETA=0.0004;AC=1706;AN=2184 GT:DS:GL:BD 0.78113556 1
1 179265075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.915;LDAF=0.5696;AVGPOST=0.8923;RSQ=0.8430;ERATE=0.0156;THETA=0.0018;AC=1272;AN=2184 GT:DS:GL:BD 0.58241761 1
1 179265101 rs74579759 ATTTTTTT A 422 PASS INDEL;BAVGPOST=0.649;BRSQ=0.086;LDAF=0.2783;AVGPOST=0.6961;RSQ=0.3685;ERATE=0.0169;THETA=0.0020;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179265191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.5979;AVGPOST=0.9721;RSQ=0.9586;ERATE=0.0035;THETA=0.0006;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 179265235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0064;AVGPOST=0.9969;RSQ=0.8413;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179265245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0045;AVGPOST=0.9926;RSQ=0.4550;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179265257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.8202;AVGPOST=0.9718;RSQ=0.9329;ERATE=0.0037;THETA=0.0004;AC=1800;AN=2184 GT:DS:GL:BD 0.82417583 1
1 179265345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2883;AVGPOST=0.9967;RSQ=0.9935;ERATE=0.0005;THETA=0.0007;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 179265396 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7910;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179265508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0167;AVGPOST=0.9989;RSQ=0.9757;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179265512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3529;AVGPOST=0.9966;RSQ=0.9938;ERATE=0.0006;THETA=0.0008;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 179265628 . A AT 56 PASS INDEL;BAVGPOST=0.999;BRSQ=0.415;LDAF=0.0024;AVGPOST=0.9960;RSQ=0.3480;ERATE=0.0013;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179265659 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179265685 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179265829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0002;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179265836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7444;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179265935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9891;AVGPOST=0.9991;RSQ=0.9694;ERATE=0.0003;THETA=0.0003;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 179266024 . TTAAGA T 482 PASS INDEL;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8121;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179266365 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7423;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179266505 . T TC 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6419;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179266541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.814;LDAF=0.0442;AVGPOST=0.9865;RSQ=0.8832;ERATE=0.0004;THETA=0.0002;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179266615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.976;LDAF=0.2418;AVGPOST=0.9928;RSQ=0.9862;ERATE=0.0006;THETA=0.0005;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 179266847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0051;AVGPOST=0.9948;RSQ=0.5981;ERATE=0.0010;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179266863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.704;LDAF=0.0113;AVGPOST=0.9934;RSQ=0.7825;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179266891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.529;LDAF=0.0072;AVGPOST=0.9933;RSQ=0.6018;ERATE=0.0012;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179266951 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.2431;AVGPOST=0.9920;RSQ=0.9852;ERATE=0.0006;THETA=0.0004;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 179266955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.3543;AVGPOST=0.9882;RSQ=0.9792;ERATE=0.0013;THETA=0.0005;AC=775;AN=2184 GT:DS:GL:BD 0.35485348 0
1 179267043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.705;LDAF=0.0068;AVGPOST=0.9935;RSQ=0.6327;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179267062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.527;LDAF=0.0095;AVGPOST=0.9953;RSQ=0.7790;ERATE=0.0004;THETA=0.0028;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179267237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179267264 . A AACTT 67998 PASS INDEL;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.9934;AVGPOST=0.9956;RSQ=0.7182;ERATE=0.0010;THETA=0.0007;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 179267281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179267286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8362;AVGPOST=0.9985;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=1826;AN=2184 GT:DS:GL:BD 0.83608061 1
1 179267301 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6319;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179267321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2421;AVGPOST=0.9969;RSQ=0.9933;ERATE=0.0005;THETA=0.0003;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 179267427 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.6918;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179267474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2283;AVGPOST=0.9895;RSQ=0.9780;ERATE=0.0028;THETA=0.0001;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 179267486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0044;AVGPOST=0.9974;RSQ=0.7763;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179267783 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8325;AVGPOST=0.9980;RSQ=0.9947;ERATE=0.0004;THETA=0.0004;AC=1818;AN=2184 GT:DS:GL:BD 0.83241761 1
1 179267869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179267873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0284;AVGPOST=0.9966;RSQ=0.9497;ERATE=0.0003;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179268323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1322;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 179268340 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0067;AVGPOST=0.9997;RSQ=0.9822;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179268341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5647;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179268457 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179268470 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179268644 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7028;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179268657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179268662 . ATATGGGACAC A 186 PASS INDEL;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0032;AVGPOST=0.9968;RSQ=0.6292;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179268671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5421;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179268756 . TA T 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.5135;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179268806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179268913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.962;LDAF=0.0955;AVGPOST=0.9802;RSQ=0.9096;ERATE=0.0006;THETA=0.0021;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 179268986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2517;AVGPOST=0.9921;RSQ=0.9848;ERATE=0.0008;THETA=0.0003;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 179268998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0082;AVGPOST=0.9952;RSQ=0.7688;ERATE=0.0005;THETA=0.0039;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179269055 rs35978895 A AT 1820 PASS INDEL;BAVGPOST=0.892;BRSQ=0.540;LDAF=0.1471;AVGPOST=0.8740;RSQ=0.6134;ERATE=0.0139;THETA=0.0003;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 179269073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0040;AVGPOST=0.9972;RSQ=0.7146;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179269079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.965;LDAF=0.3014;AVGPOST=0.9883;RSQ=0.9812;ERATE=0.0010;THETA=0.0004;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 179269185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179269191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6251;ERATE=0.0004;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179269236 . C CT 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.4500;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179269280 . G GA 54 PASS INDEL;BAVGPOST=0.989;BRSQ=0.507;LDAF=0.0269;AVGPOST=0.9649;RSQ=0.4576;ERATE=0.0080;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179269345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9034;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179269444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8359;AVGPOST=0.9991;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=1825;AN=2184 GT:DS:GL:BD 0.83562273 1
1 179269507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8160;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179269549 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2423;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0005;THETA=0.0008;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 179269575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.9127;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179269681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179269779 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8961;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179269788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6063;AVGPOST=0.9967;RSQ=0.9948;ERATE=0.0007;THETA=0.0005;AC=1323;AN=2184 GT:DS:GL:BD 0.60576922 1
1 179269953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0294;AVGPOST=0.9992;RSQ=0.9885;ERATE=0.0003;THETA=0.0002;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179270005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9952;RSQ=0.8454;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179270183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9993;RSQ=0.9689;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179270314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2156;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 179270372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0019;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179270429 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9589;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179270457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179270473 . T TA 106 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6918;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179270636 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6022;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0006;THETA=0.0005;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 179270731 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6158;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179270792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6029;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0006;THETA=0.0002;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 179270943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8933;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179271021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179271044 . ATCT A 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7641;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179271080 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179271401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=1.0000;RSQ=0.9978;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179271402 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179271421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5691;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179271432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1349;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 179271486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179271537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179271553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179271573 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6430;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179271574 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3601;AVGPOST=0.9959;RSQ=0.9925;ERATE=0.0010;THETA=0.0004;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 179271639 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0017;AVGPOST=0.9997;RSQ=0.9308;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179271755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179271776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179271784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0013;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179271815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179271826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179271916 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179271950 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179271959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9696;ERATE=0.0014;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179272086 . TAA T 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5125;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179272094 rs34107630 T TG 7943 PASS INDEL;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0348;AVGPOST=0.9976;RSQ=0.9754;ERATE=0.0004;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 179272116 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.6972;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0002;THETA=0.0003;AC=1521;AN=2184 GT:DS:GL:BD 0.69642860 1
1 179272174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179272192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8392;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179272276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8976;ERATE=0.0006;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179272281 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9395;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179272287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8518;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179272306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0196;AVGPOST=0.9993;RSQ=0.9848;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 179272320 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179272340 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5504;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179272566 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7283;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179272577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9849;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179272717 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2957;AVGPOST=0.9953;RSQ=0.9921;ERATE=0.0010;THETA=0.0007;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 179272778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9478;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179273031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1523;AVGPOST=0.9986;RSQ=0.9956;ERATE=0.0003;THETA=0.0009;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 179273037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179273041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5509;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179273149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179273212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5996;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=1308;AN=2184 GT:DS:GL:BD 0.59890109 1
1 179273324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2423;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 179273369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0191;AVGPOST=0.9992;RSQ=0.9804;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179273549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9362;ERATE=0.0002;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179273602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9972;ERATE=0.0002;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 179273632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7547;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179273704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3485;AVGPOST=0.9978;RSQ=0.9957;ERATE=0.0006;THETA=0.0026;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 179273941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2305;AVGPOST=0.9976;RSQ=0.9951;ERATE=0.0006;THETA=0.0008;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 179273974 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9993;RSQ=0.9203;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179273990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5994;AVGPOST=0.9968;RSQ=0.9952;ERATE=0.0005;THETA=0.0003;AC=1308;AN=2184 GT:DS:GL:BD 0.59890109 1
1 179273994 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3381;AVGPOST=0.9966;RSQ=0.9937;ERATE=0.0005;THETA=0.0005;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 179274002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6023;AVGPOST=0.9923;RSQ=0.9881;ERATE=0.0015;THETA=0.0003;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 179274116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9119;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179274173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179274208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0002;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179274238 . C CCT 47166 PASS INDEL;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.5938;AVGPOST=0.9832;RSQ=0.9755;ERATE=0.0043;THETA=0.0001;AC=1298;AN=2184 GT:DS:GL:BD 0.59432232 1
1 179274243 rs72501155 C CTT 103547 PASS INDEL;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.6012;AVGPOST=0.9953;RSQ=0.9930;ERATE=0.0005;THETA=0.0006;AC=1312;AN=2184 GT:DS:GL:BD 0.60073262 1
1 179274319 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9873;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179274442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3483;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0003;THETA=0.0024;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 179274476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9911;ERATE=0.0002;THETA=0.0001;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179274580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0071;AVGPOST=0.9996;RSQ=0.9749;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179274629 rs57046177 TG T 49016 PASS INDEL;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.5990;AVGPOST=0.9958;RSQ=0.9939;ERATE=0.0008;THETA=0.0003;AC=1306;AN=2184 GT:DS:GL:BD 0.59798533 1
1 179274646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.1426;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179274651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179274652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179274692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3199;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0003;THETA=0.0041;AC=697;AN=2184 GT:DS:GL:BD 0.31913918 0
1 179274781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2416;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0002;THETA=0.0002;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 179274850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179274857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3487;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0002;THETA=0.0003;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 179274861 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179274897 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2177;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0006;THETA=0.0003;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 179275009 rs35403556 AC A 27415 PASS INDEL;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3498;AVGPOST=0.9900;RSQ=0.9824;ERATE=0.0026;THETA=0.0004;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 179275044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179275222 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179275236 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3466;AVGPOST=0.9980;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=758;AN=2184 GT:DS:GL:BD 0.34706959 0
1 179275257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2509;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0005;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 179275259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6025;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0004;THETA=0.0006;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 179275263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0104;AVGPOST=0.9993;RSQ=0.9713;ERATE=0.0002;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179275343 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6955;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179275360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8148;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179275376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0002;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179275395 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179275424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0047;AVGPOST=0.9990;RSQ=0.9129;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179275519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6026;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 179275527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6004;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0002;THETA=0.0002;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 179275579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2509;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 179275691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179275783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.560;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.2944;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179275795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.852;LDAF=0.0107;AVGPOST=0.9932;RSQ=0.7510;ERATE=0.0005;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179275864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9827;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179275917 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2417;AVGPOST=0.9975;RSQ=0.9948;ERATE=0.0005;THETA=0.0003;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 179275984 . A AAC 375 PASS INDEL;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0076;AVGPOST=0.9985;RSQ=0.9138;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179276035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9589;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179276058 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179276195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5994;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0003;THETA=0.0008;AC=1308;AN=2184 GT:DS:GL:BD 0.59890109 1
1 179276302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6048;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0002;AC=1321;AN=2184 GT:DS:GL:BD 0.60485345 1
1 179276327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179276338 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179276357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9890;AVGPOST=0.9998;RSQ=0.9932;ERATE=0.0002;THETA=0.0004;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 179276414 . TTG T 1822 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9997;RSQ=0.9851;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179276504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179276573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179276784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0061;AVGPOST=0.9980;RSQ=0.8666;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179276851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0472;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0007;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 179276867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8547;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179276899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179276990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.445;LDAF=0.9467;AVGPOST=0.9356;RSQ=0.5138;ERATE=0.0053;THETA=0.0005;AC=2110;AN=2184 GT:DS:GL:BD 0.96611720 1
1 179277123 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.959;LDAF=0.3341;AVGPOST=0.9888;RSQ=0.9809;ERATE=0.0006;THETA=0.0004;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 179277125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.959;LDAF=0.3415;AVGPOST=0.9913;RSQ=0.9847;ERATE=0.0006;THETA=0.0002;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 179277176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6245;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179277178 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.699;LDAF=0.0059;AVGPOST=0.9953;RSQ=0.7039;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179277276 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9428;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179277331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.8561;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179277349 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3485;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 179277447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.669;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179277491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.9025;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179277524 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.962;LDAF=0.0905;AVGPOST=0.9904;RSQ=0.9573;ERATE=0.0005;THETA=0.0008;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 179277535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0083;AVGPOST=0.9975;RSQ=0.8753;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179277556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0072;AVGPOST=0.9992;RSQ=0.9502;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179277602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2174;AVGPOST=0.9963;RSQ=0.9916;ERATE=0.0005;THETA=0.0005;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 179277636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0102;AVGPOST=0.9984;RSQ=0.9417;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179277693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2516;AVGPOST=0.9963;RSQ=0.9927;ERATE=0.0005;THETA=0.0017;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 179277731 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.562;LDAF=0.9775;AVGPOST=0.9675;RSQ=0.4147;ERATE=0.0047;THETA=0.0005;AC=2162;AN=2184 GT:DS:GL:BD 0.98992676 1
1 179277739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.562;LDAF=0.0046;AVGPOST=0.9961;RSQ=0.6427;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179277762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.688;LDAF=0.0150;AVGPOST=0.9899;RSQ=0.7276;ERATE=0.0005;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179277763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.442;LDAF=0.0043;AVGPOST=0.9960;RSQ=0.6150;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179277935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0158;AVGPOST=0.9978;RSQ=0.9482;ERATE=0.0003;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179277936 . T TTCC 35660 PASS INDEL;BAVGPOST=0.985;BRSQ=0.973;LDAF=0.6009;AVGPOST=0.9946;RSQ=0.9912;ERATE=0.0007;THETA=0.0003;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 179277938 . C CCTCA 34698 PASS INDEL;BAVGPOST=0.977;BRSQ=0.960;LDAF=0.5869;AVGPOST=0.9447;RSQ=0.9198;ERATE=0.0133;THETA=0.0006;AC=1292;AN=2184 GT:DS:GL:BD 0.59157509 1
1 179278005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2269;AVGPOST=0.9973;RSQ=0.9944;ERATE=0.0004;THETA=0.0003;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 179278022 . GA G 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179278063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0074;AVGPOST=0.9988;RSQ=0.9355;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179278073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9875;ERATE=0.0002;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179278083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6199;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179278215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.4717;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179278218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7715;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179278279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.979;LDAF=0.5924;AVGPOST=0.9880;RSQ=0.9825;ERATE=0.0009;THETA=0.0005;AC=1299;AN=2184 GT:DS:GL:BD 0.59478021 1
1 179278282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0224;AVGPOST=0.9949;RSQ=0.9193;ERATE=0.0004;THETA=0.0009;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 179278322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9581;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179278424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9958;RSQ=0.8034;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179278462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5262;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179278602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0111;AVGPOST=0.9989;RSQ=0.9556;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179278960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9991;RSQ=0.9685;ERATE=0.0002;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179279012 . TG T 513 PASS INDEL;BAVGPOST=0.933;BRSQ=0.501;LDAF=0.1052;AVGPOST=0.8737;RSQ=0.4720;ERATE=0.0261;THETA=0.0002;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 179279139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.970;LDAF=0.5898;AVGPOST=0.9606;RSQ=0.9427;ERATE=0.0057;THETA=0.0003;AC=1296;AN=2184 GT:DS:GL:BD 0.59340662 1
1 179279237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.622;LDAF=0.0105;AVGPOST=0.9899;RSQ=0.6354;ERATE=0.0017;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179279344 . TA T 24187 PASS INDEL;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.5955;AVGPOST=0.9894;RSQ=0.9836;ERATE=0.0011;THETA=0.0003;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 179279558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9998;RSQ=0.9940;ERATE=0.0003;THETA=0.0015;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179279594 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8184;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179279672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9901;ERATE=0.0002;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179279685 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2928;AVGPOST=0.9964;RSQ=0.9939;ERATE=0.0005;THETA=0.0039;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 179279736 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179279759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7340;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179279771 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6015;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179279775 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179279809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0940;AVGPOST=0.9984;RSQ=0.9917;ERATE=0.0003;THETA=0.0003;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 179279868 . G GT 1221 PASS INDEL;BAVGPOST=0.996;BRSQ=0.843;LDAF=0.0112;AVGPOST=0.9977;RSQ=0.9227;ERATE=0.0002;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179279982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6034;AVGPOST=0.9966;RSQ=0.9951;ERATE=0.0008;THETA=0.0004;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 179280023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2415;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0003;THETA=0.0013;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 179280086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6785;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179280114 . GAGA G 355 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9959;RSQ=0.4600;ERATE=0.0009;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179280151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7559;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179280342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6007;AVGPOST=0.9960;RSQ=0.9936;ERATE=0.0008;THETA=0.0005;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 179280351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.9881;AVGPOST=0.9978;RSQ=0.9226;ERATE=0.0005;THETA=0.0006;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 179280383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8123;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179280437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0256;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179280466 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.713;LDAF=0.0038;AVGPOST=0.9975;RSQ=0.7547;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179280529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6475;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179280534 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9870;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179280551 . A AT 15959 PASS INDEL;BAVGPOST=0.967;BRSQ=0.942;LDAF=0.5740;AVGPOST=0.9298;RSQ=0.9007;ERATE=0.0141;THETA=0.0002;AC=1275;AN=2184 GT:DS:GL:BD 0.58379120 1
1 179280552 rs11431968 T TA 63773 PASS INDEL;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.6055;AVGPOST=0.9905;RSQ=0.9857;ERATE=0.0009;THETA=0.0011;AC=1321;AN=2184 GT:DS:GL:BD 0.60485345 1
1 179280623 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9237;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179280709 . G GT 78 PASS INDEL;BAVGPOST=0.984;BRSQ=0.639;LDAF=0.0317;AVGPOST=0.9928;RSQ=0.9134;ERATE=0.0005;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 179280715 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0274;AVGPOST=0.9952;RSQ=0.9342;ERATE=0.0004;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179280732 rs11393259 T TC 61638 PASS INDEL;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5981;AVGPOST=0.9706;RSQ=0.9583;ERATE=0.0057;THETA=0.0004;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 179280770 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7185;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179280805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0101;AVGPOST=0.9990;RSQ=0.9617;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179280980 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9766;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179281069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7811;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179281078 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9122;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179281099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0085;AVGPOST=0.9989;RSQ=0.9543;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179281157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179281349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179281381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9994;RSQ=0.9789;ERATE=0.0002;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179281475 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179281551 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3517;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 179281630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0119;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0002;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179281727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179281728 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6027;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 179281928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8886;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179281936 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179282084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7153;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179282166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6150;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179282184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179282187 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8580;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179282236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179282400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7853;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179282513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179282530 rs10564179 TATG T 24969 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2417;AVGPOST=0.9985;RSQ=0.9964;ERATE=0.0006;THETA=0.0002;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 179282532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8880;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179282717 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0016;AVGPOST=0.9972;RSQ=0.3178;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179282727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.491;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4318;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179282730 . T TA 264 PASS INDEL;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9261;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179282760 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9992;RSQ=0.8986;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179282855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.981;LDAF=0.5972;AVGPOST=0.9906;RSQ=0.9857;ERATE=0.0017;THETA=0.0005;AC=1305;AN=2184 GT:DS:GL:BD 0.59752744 1
1 179282876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.650;LDAF=0.0102;AVGPOST=0.9900;RSQ=0.6410;ERATE=0.0008;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179282939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2404;AVGPOST=0.9909;RSQ=0.9812;ERATE=0.0010;THETA=0.0007;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 179282954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.858;LDAF=0.0102;AVGPOST=0.9954;RSQ=0.8099;ERATE=0.0013;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179283212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1565;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 179283241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7422;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179283392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179283640 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1350;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 179283658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1673;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 179283826 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9989;RSQ=0.9369;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179283843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.7727;AVGPOST=0.9977;RSQ=0.9950;ERATE=0.0005;THETA=0.0002;AC=1689;AN=2184 GT:DS:GL:BD 0.77335167 1
1 179283903 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179283935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9207;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179283988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179284098 . T TA 133 PASS INDEL;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8231;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179284111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6807;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179284153 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9924;ERATE=0.0002;THETA=0.0001;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179284253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6582;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179284423 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.957;LDAF=0.5800;AVGPOST=0.9833;RSQ=0.9770;ERATE=0.0007;THETA=0.0003;AC=1271;AN=2184 GT:DS:GL:BD 0.58195972 1
1 179284606 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0068;AVGPOST=0.9966;RSQ=0.7920;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179284816 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8795;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179284850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0008;AVGPOST=0.9987;RSQ=0.3490;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179284853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7291;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179284854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.753;LDAF=0.0112;AVGPOST=0.9942;RSQ=0.7993;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179284979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.8172;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179285019 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.973;LDAF=0.3432;AVGPOST=0.9895;RSQ=0.9814;ERATE=0.0017;THETA=0.0004;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 179285084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6800;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179285243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179285381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179285394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8458;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179285401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179285421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1564;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 179285442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179285464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2118;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 179285489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0293;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179285511 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179285555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.5981;AVGPOST=0.9934;RSQ=0.9901;ERATE=0.0009;THETA=0.0003;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 179285591 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.974;LDAF=0.2093;AVGPOST=0.9891;RSQ=0.9786;ERATE=0.0005;THETA=0.0003;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 179285624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.957;LDAF=0.5803;AVGPOST=0.9796;RSQ=0.9703;ERATE=0.0024;THETA=0.0003;AC=1273;AN=2184 GT:DS:GL:BD 0.58287543 1
1 179285755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1659;AVGPOST=0.9978;RSQ=0.9936;ERATE=0.0005;THETA=0.0003;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 179285825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.3489;AVGPOST=0.9967;RSQ=0.9938;ERATE=0.0005;THETA=0.0004;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 179285832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9191;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179285853 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7951;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179285939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2280;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 179285991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9886;AVGPOST=0.9988;RSQ=0.9569;ERATE=0.0004;THETA=0.0008;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 179286103 . CAG C 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5715;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179286163 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179286224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5796;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179286347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5632;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179286403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.782;LDAF=0.0123;AVGPOST=0.9947;RSQ=0.8238;ERATE=0.0005;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179286622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0443;AVGPOST=0.9879;RSQ=0.9001;ERATE=0.0008;THETA=0.0002;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 179286688 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0047;AVGPOST=0.9983;RSQ=0.8417;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179286714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6028;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0005;THETA=0.0003;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 179286916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0073;AVGPOST=0.9979;RSQ=0.8886;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179286924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9996;RSQ=0.9739;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179287226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9456;ERATE=0.0003;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179287227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8009;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179287244 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6697;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179287245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1566;AVGPOST=0.9987;RSQ=0.9957;ERATE=0.0005;THETA=0.0002;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 179287299 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0173;AVGPOST=0.9975;RSQ=0.9386;ERATE=0.0004;THETA=0.0001;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179287352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6258;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179287376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0203;AVGPOST=0.9975;RSQ=0.9618;ERATE=0.0003;THETA=0.0020;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 179287408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6018;AVGPOST=0.9978;RSQ=0.9962;ERATE=0.0006;THETA=0.0003;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 179287511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179287565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6881;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179287593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179287667 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2157;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 179287755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9543;ERATE=0.0002;THETA=0.0016;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179287832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6875;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179288070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6517;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179288147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0076;AVGPOST=0.9985;RSQ=0.9370;ERATE=0.0002;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179288240 . CTTG C 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5673;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179288347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179288374 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.900;LDAF=0.5466;AVGPOST=0.9242;RSQ=0.8861;ERATE=0.0225;THETA=0.0003;AC=1210;AN=2184 GT:DS:GL:BD 0.55402929 1
1 179288473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0294;AVGPOST=0.9995;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179288487 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2423;AVGPOST=0.9967;RSQ=0.9926;ERATE=0.0008;THETA=0.0017;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 179288606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.760;LDAF=0.9127;AVGPOST=0.9306;RSQ=0.6763;ERATE=0.0192;THETA=0.0002;AC=2035;AN=2184 GT:DS:GL:BD 0.93177658 1
1 179288624 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.736;LDAF=0.0121;AVGPOST=0.9922;RSQ=0.7831;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179288641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7312;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179288704 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8839;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179288740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2412;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0005;THETA=0.0005;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 179288818 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7735;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179288856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0167;AVGPOST=0.9996;RSQ=0.9883;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179288906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2408;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0007;THETA=0.0003;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 179288922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8783;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179289052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7512;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179289099 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9998;RSQ=0.9942;ERATE=0.0002;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179289123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3518;AVGPOST=0.9966;RSQ=0.9934;ERATE=0.0005;THETA=0.0004;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 179289149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179289154 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2157;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0005;THETA=0.0004;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 179289238 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9383;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179289301 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7929;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179289349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0448;AVGPOST=0.9983;RSQ=0.9848;ERATE=0.0002;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 179289359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179289402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0039;AVGPOST=0.9983;RSQ=0.8632;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179289409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7403;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179289452 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179289507 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2934;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 179289538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179289579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5692;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179289657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4911;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179289763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179289787 . A AG 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5584;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179289876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7270;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179289965 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179290017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179290025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.4947;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179290160 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0035;AVGPOST=0.9949;RSQ=0.4539;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179290161 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6010;AVGPOST=0.9955;RSQ=0.9931;ERATE=0.0005;THETA=0.0003;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 179290195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2180;AVGPOST=0.9988;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 179290261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4056;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179290292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3227;AVGPOST=0.9968;RSQ=0.9944;ERATE=0.0004;THETA=0.0002;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 179290296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6184;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179290406 . A AT 915 PASS INDEL;BAVGPOST=0.995;BRSQ=0.831;LDAF=0.0146;AVGPOST=0.9933;RSQ=0.8279;ERATE=0.0013;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179290436 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.9890;AVGPOST=0.9994;RSQ=0.9750;ERATE=0.0003;THETA=0.0008;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 179290491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179290495 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9809;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179290514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179290550 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6050;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=1321;AN=2184 GT:DS:GL:BD 0.60485345 1
1 179290648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0894;AVGPOST=0.9981;RSQ=0.9913;ERATE=0.0003;THETA=0.0004;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 179290803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179290885 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179290889 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3232;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0004;THETA=0.0005;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 179291086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0111;AVGPOST=0.9976;RSQ=0.9266;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179291095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0037;AVGPOST=0.9962;RSQ=0.6444;ERATE=0.0005;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179291269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179291277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8107;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179291310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.6155;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179291423 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7674;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179291740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179291774 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3514;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0005;THETA=0.0004;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 179291790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9739;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179291802 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6027;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 179291843 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179291914 rs67008707 AGATTTCCTTCTGTTTT A 60256 PASS INDEL;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.2912;AVGPOST=0.9941;RSQ=0.9886;ERATE=0.0008;THETA=0.0009;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 179292000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1559;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 179292039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.648;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8739;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179292043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8598;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179292049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=0.9996;RSQ=0.9933;ERATE=0.0002;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179292123 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6404;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179292128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8825;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179292177 . T TTTC 368 PASS INDEL;BAVGPOST=0.975;BRSQ=0.464;LDAF=0.0361;AVGPOST=0.9570;RSQ=0.5380;ERATE=0.0029;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179292391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179292435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7949;ERATE=0.0002;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179292442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6029;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0002;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 179292574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0017;AVGPOST=0.9997;RSQ=0.9210;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179292779 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179292885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179292890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6398;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179292896 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9533;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179292946 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0362;AVGPOST=0.9970;RSQ=0.9701;ERATE=0.0004;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 179293029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.6018;AVGPOST=0.9969;RSQ=0.9953;ERATE=0.0007;THETA=0.0005;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 179293079 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1332;AVGPOST=0.9985;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 179293251 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0060;AVGPOST=0.9982;RSQ=0.8846;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179293252 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0059;AVGPOST=0.9985;RSQ=0.9107;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179293274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5901;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179293372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7749;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179293438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9614;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179293511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2175;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 179293549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179293565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179293579 . GTCC G 434 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179293583 . T TC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5202;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179293622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179293715 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8434;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179293810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179293838 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7213;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179293907 rs72344829 CAA C 25363 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1354;AVGPOST=0.9982;RSQ=0.9937;ERATE=0.0005;THETA=0.0003;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 179293953 . TG T 1196 PASS INDEL;BAVGPOST=0.876;BRSQ=0.615;LDAF=0.1720;AVGPOST=0.8785;RSQ=0.7000;ERATE=0.0149;THETA=0.0006;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 179293955 . T TTTG 14652 PASS INDEL;BAVGPOST=0.953;BRSQ=0.856;LDAF=0.2064;AVGPOST=0.9472;RSQ=0.8780;ERATE=0.0063;THETA=0.0002;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 179293957 . T TG 807 PASS INDEL;BAVGPOST=0.914;BRSQ=0.612;LDAF=0.1128;AVGPOST=0.9163;RSQ=0.6997;ERATE=0.0046;THETA=0.0002;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 179293993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.723;LDAF=0.0061;AVGPOST=0.9960;RSQ=0.7238;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179294023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2427;AVGPOST=0.9956;RSQ=0.9913;ERATE=0.0006;THETA=0.0003;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 179294141 . C CAA 258 PASS INDEL;BAVGPOST=0.979;BRSQ=0.425;LDAF=0.0371;AVGPOST=0.9511;RSQ=0.4991;ERATE=0.0061;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 179294143 rs35352402 T TTA 76911 PASS INDEL;BAVGPOST=0.976;BRSQ=0.689;LDAF=0.9387;AVGPOST=0.9392;RSQ=0.6100;ERATE=0.0082;THETA=0.0004;AC=2094;AN=2184 GT:DS:GL:BD 0.95879120 1
1 179294171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.544;LDAF=0.0048;AVGPOST=0.9957;RSQ=0.6485;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179294186 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9992;RSQ=0.9461;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179294193 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.7989;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179294231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3427;AVGPOST=0.9968;RSQ=0.9943;ERATE=0.0004;THETA=0.0002;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 179294319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.926;LDAF=0.0989;AVGPOST=0.9834;RSQ=0.9327;ERATE=0.0008;THETA=0.0007;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 179294370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.2427;AVGPOST=0.9913;RSQ=0.9816;ERATE=0.0012;THETA=0.0002;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 179294422 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.9866;AVGPOST=0.9958;RSQ=0.8692;ERATE=0.0011;THETA=0.0004;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 179294425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2263;AVGPOST=0.9953;RSQ=0.9888;ERATE=0.0008;THETA=0.0002;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 179294436 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0039;AVGPOST=0.9944;RSQ=0.4071;ERATE=0.0020;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179294486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2301;AVGPOST=0.9804;RSQ=0.9596;ERATE=0.0032;THETA=0.0006;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 179294489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.464;LDAF=0.0031;AVGPOST=0.9947;RSQ=0.2811;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179294567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6521;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179294579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.7086;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179294868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7081;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179294910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.824;LDAF=0.0184;AVGPOST=0.9938;RSQ=0.8670;ERATE=0.0007;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179294949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179295035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9888;AVGPOST=0.9990;RSQ=0.9641;ERATE=0.0003;THETA=0.0005;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 179295054 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7798;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179295111 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9890;AVGPOST=0.9995;RSQ=0.9807;ERATE=0.0003;THETA=0.0003;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 179295135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179295201 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7887;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179295235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6877;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179295332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3514;AVGPOST=0.9969;RSQ=0.9942;ERATE=0.0006;THETA=0.0005;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 179295343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179295437 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179295532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6021;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0003;THETA=0.0007;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 179295594 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0210;AVGPOST=0.9967;RSQ=0.9358;ERATE=0.0002;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 179295724 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.681;LDAF=0.0036;AVGPOST=0.9968;RSQ=0.6885;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179295760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1326;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0008;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 179295786 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6211;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179295787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7620;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179295854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.559;LDAF=0.0030;AVGPOST=0.9949;RSQ=0.3468;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179296008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6015;AVGPOST=0.9965;RSQ=0.9948;ERATE=0.0005;THETA=0.0004;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 179296055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1357;AVGPOST=0.9991;RSQ=0.9970;ERATE=0.0002;THETA=0.0015;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 179296218 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2419;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 179296367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2506;AVGPOST=0.9979;RSQ=0.9953;ERATE=0.0006;THETA=0.0005;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 179296516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0071;AVGPOST=0.9996;RSQ=0.9729;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179296538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0300;AVGPOST=0.9983;RSQ=0.9820;ERATE=0.0002;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 179296557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0197;AVGPOST=0.9994;RSQ=0.9872;ERATE=0.0002;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 179296576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.790;LDAF=0.0054;AVGPOST=0.9957;RSQ=0.7110;ERATE=0.0009;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179296934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.9894;AVGPOST=0.9987;RSQ=0.9561;ERATE=0.0003;THETA=0.0003;AC=2162;AN=2184 GT:DS:GL:BD 0.98992676 1
1 179296994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179297012 . C CG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179297108 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179297199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9873;ERATE=0.0003;THETA=0.0014;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179297390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.790;LDAF=0.0067;AVGPOST=0.9963;RSQ=0.8068;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179297511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3932;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179297651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0248;AVGPOST=0.9989;RSQ=0.9820;ERATE=0.0002;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179297652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5550;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179297821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0113;AVGPOST=0.9985;RSQ=0.9470;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179297823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.8908;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179297832 . CAT C 1203 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9745;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179297889 . C CAA 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6203;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179298065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6798;ERATE=0.0008;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179298073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9401;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179298137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0130;AVGPOST=0.9976;RSQ=0.9149;ERATE=0.0006;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179298439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0044;AVGPOST=0.9978;RSQ=0.7919;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179298468 rs71111908 CTG C 315 PASS INDEL;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0049;AVGPOST=0.9981;RSQ=0.8367;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179298558 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0029;AVGPOST=0.9955;RSQ=0.4955;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179298571 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179298583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8097;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179298598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0475;AVGPOST=0.9978;RSQ=0.9809;ERATE=0.0003;THETA=0.0006;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 179298809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2167;AVGPOST=0.9978;RSQ=0.9944;ERATE=0.0004;THETA=0.0003;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 179298867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8245;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179299056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179299147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2331;AVGPOST=0.9969;RSQ=0.9934;ERATE=0.0005;THETA=0.0003;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 179299148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179299199 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179299418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7282;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179299493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5484;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179299498 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6885;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179299605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2410;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0005;THETA=0.0003;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 179299664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0183;AVGPOST=0.9994;RSQ=0.9855;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179299714 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3426;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 179299748 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7442;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179299808 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179299861 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.790;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8691;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179299868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9342;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179299896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6021;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0004;THETA=0.0004;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 179299943 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.683;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.7814;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179300157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179300174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3408;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0004;THETA=0.0002;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 179300224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179300294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9811;ERATE=0.0002;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179300318 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8143;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179300353 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179300435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6018;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0005;THETA=0.0003;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 179300436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179300496 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6021;AVGPOST=0.9974;RSQ=0.9956;ERATE=0.0007;THETA=0.0008;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 179300548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7537;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179300574 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179300747 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179300769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0065;AVGPOST=0.9990;RSQ=0.9362;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179300791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8067;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179300799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6772;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179300815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179301081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6856;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179301107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8949;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179301108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179301310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179301386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0168;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0002;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179301458 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8755;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179301631 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179301675 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4122;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179301696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9872;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179301783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9934;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179301888 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7152;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179301949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9772;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179302002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2428;AVGPOST=0.9963;RSQ=0.9927;ERATE=0.0004;THETA=0.0011;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 179302003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3215;AVGPOST=0.9969;RSQ=0.9949;ERATE=0.0003;THETA=0.0042;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 179302067 . GCA G 8233 PASS INDEL;BAVGPOST=0.986;BRSQ=0.966;LDAF=0.2364;AVGPOST=0.9867;RSQ=0.9744;ERATE=0.0013;THETA=0.0012;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 179302068 rs76005019 CAG C 30996 PASS INDEL;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2430;AVGPOST=0.9960;RSQ=0.9915;ERATE=0.0006;THETA=0.0011;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 179302455 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179302468 . G GC 16 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5411;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179302517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9259;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179302612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0113;AVGPOST=0.9978;RSQ=0.9189;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179302654 . TAGTG T 1306 PASS INDEL;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0086;AVGPOST=0.9989;RSQ=0.9513;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179302676 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5559;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179302757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2438;AVGPOST=0.9954;RSQ=0.9899;ERATE=0.0004;THETA=0.0002;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 179302824 . TG T 1969 PASS INDEL;BAVGPOST=0.985;BRSQ=0.795;LDAF=0.0241;AVGPOST=0.9923;RSQ=0.8769;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 179302881 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2420;AVGPOST=0.9975;RSQ=0.9946;ERATE=0.0004;THETA=0.0008;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 179302904 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.7062;ERATE=0.0004;THETA=0.0037;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179302935 rs10716719 TC T 24911 PASS INDEL;BAVGPOST=0.924;BRSQ=0.901;LDAF=0.5663;AVGPOST=0.9577;RSQ=0.9458;ERATE=0.0012;THETA=0.0002;AC=1252;AN=2184 GT:DS:GL:BD 0.57326007 1
1 179302937 rs10716718 TA T 24823 PASS INDEL;BAVGPOST=0.926;BRSQ=0.904;LDAF=0.5667;AVGPOST=0.9588;RSQ=0.9450;ERATE=0.0013;THETA=0.0006;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 179302993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.736;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8772;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179302994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9233;ERATE=0.0004;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179303100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3412;AVGPOST=0.9959;RSQ=0.9924;ERATE=0.0007;THETA=0.0005;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 179303130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179303202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.6350;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179303358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179303361 . AT A 929 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0062;AVGPOST=0.9989;RSQ=0.9360;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179303437 . AT A 312 PASS INDEL;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7662;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179303559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9995;RSQ=0.9902;ERATE=0.0003;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 179303594 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179303705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8262;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179303726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179303779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0298;AVGPOST=0.9990;RSQ=0.9875;ERATE=0.0003;THETA=0.0006;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 179303783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8848;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179303793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6036;AVGPOST=0.9967;RSQ=0.9954;ERATE=0.0004;THETA=0.0005;AC=1320;AN=2184 GT:DS:GL:BD 0.60439563 1
1 179303831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9418;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179303847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9146;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179303886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.6028;AVGPOST=0.9897;RSQ=0.9849;ERATE=0.0018;THETA=0.0003;AC=1321;AN=2184 GT:DS:GL:BD 0.60485345 1
1 179303988 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6607;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179304042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4043;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179304090 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.698;LDAF=0.0055;AVGPOST=0.9975;RSQ=0.8302;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179304105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0199;AVGPOST=0.9980;RSQ=0.9523;ERATE=0.0005;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179304293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0224;AVGPOST=0.9988;RSQ=0.9810;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 179304349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0078;AVGPOST=0.9986;RSQ=0.9260;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179304428 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179304504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179304524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2922;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0006;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 179304738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179304739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179304840 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179304861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179304892 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6047;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0021;AC=1320;AN=2184 GT:DS:GL:BD 0.60439563 1
1 179304990 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179305062 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7077;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179305063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2922;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0005;THETA=0.0002;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 179305078 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.3404;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0003;THETA=0.0007;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 179305101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9744;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179305110 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2627;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0005;THETA=0.0003;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 179305193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179305214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5537;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179305230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3400;AVGPOST=0.9960;RSQ=0.9930;ERATE=0.0007;THETA=0.0002;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 179305273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.829;LDAF=0.0103;AVGPOST=0.9976;RSQ=0.9108;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179305327 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5550;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179305368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2526;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 179305403 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0109;AVGPOST=0.9981;RSQ=0.9188;ERATE=0.0005;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179305416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9987;RSQ=0.3107;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179305458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2253;AVGPOST=0.9929;RSQ=0.9851;ERATE=0.0008;THETA=0.0004;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 179305481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0120;AVGPOST=0.9968;RSQ=0.9168;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179305488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3428;AVGPOST=0.9953;RSQ=0.9915;ERATE=0.0010;THETA=0.0004;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 179305573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7251;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179305719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9510;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179305772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0002;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179305792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0183;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0002;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179305832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5868;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179305835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8737;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179305867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.755;LDAF=0.0047;AVGPOST=0.9961;RSQ=0.6677;ERATE=0.0009;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179305874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.973;LDAF=0.3426;AVGPOST=0.9857;RSQ=0.9763;ERATE=0.0015;THETA=0.0007;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 179305907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.971;LDAF=0.3226;AVGPOST=0.9975;RSQ=0.9949;ERATE=0.0007;THETA=0.0003;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 179305913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.3898;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179305922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.628;LDAF=0.9474;AVGPOST=0.9457;RSQ=0.5834;ERATE=0.0049;THETA=0.0003;AC=2093;AN=2184 GT:DS:GL:BD 0.95833331 1
1 179305958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0081;AVGPOST=0.9947;RSQ=0.7807;ERATE=0.0008;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179305986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0078;AVGPOST=0.9989;RSQ=0.9412;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179306062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8245;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179306086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2527;AVGPOST=0.9926;RSQ=0.9859;ERATE=0.0007;THETA=0.0007;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 179306200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3226;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0002;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 179306268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8278;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179306317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179306382 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179306439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6519;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179306510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179306595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8284;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179306623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9355;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179306626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179306643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.799;LDAF=0.0133;AVGPOST=0.9963;RSQ=0.9010;ERATE=0.0006;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179306786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179306849 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179306853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179306924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179306933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179306952 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179307047 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1522;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0004;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 179307091 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179307205 . TTTC T 145 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.5771;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179307218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0344;AVGPOST=0.9985;RSQ=0.9834;ERATE=0.0002;THETA=0.0015;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 179307341 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8330;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179307364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5993;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179307593 . T TA 246 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179307764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179307860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.3411;AVGPOST=0.9940;RSQ=0.9891;ERATE=0.0012;THETA=0.0004;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 179307959 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2515;AVGPOST=0.9981;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 179308103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6482;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179308218 . TATC T 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0023;AVGPOST=0.9965;RSQ=0.4384;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179308221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0002;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179308345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179308437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8413;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179308447 . TG T 89 PASS INDEL;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0025;AVGPOST=0.9967;RSQ=0.5088;ERATE=0.0008;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179308556 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179308568 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179308605 . T TA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7885;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179308655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179308708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179308803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2614;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0003;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 179308865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179308964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179308993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.958;LDAF=0.2818;AVGPOST=0.9883;RSQ=0.9805;ERATE=0.0006;THETA=0.0004;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 179308994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.980;LDAF=0.8313;AVGPOST=0.9970;RSQ=0.9915;ERATE=0.0004;THETA=0.0002;AC=1817;AN=2184 GT:DS:GL:BD 0.83195972 1
1 179309053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0331;AVGPOST=0.9985;RSQ=0.9829;ERATE=0.0002;THETA=0.0012;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 179309098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2612;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 179309111 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2612;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0005;THETA=0.0003;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 179309138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5548;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179309157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179309372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.9091;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179309400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4159;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179309579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.3405;AVGPOST=0.9950;RSQ=0.9908;ERATE=0.0010;THETA=0.0003;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 179309608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0046;AVGPOST=0.9992;RSQ=0.9228;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179309704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9891;AVGPOST=0.9996;RSQ=0.9862;ERATE=0.0003;THETA=0.0002;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 179309840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179309989 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3493;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 179310034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0036;AVGPOST=0.9999;RSQ=0.9826;ERATE=0.0002;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179310244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179310258 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179310262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2934;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 179310275 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179310313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179310383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179310439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0892;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0002;THETA=0.0005;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 179310483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179310501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8417;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179310590 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9997;RSQ=0.9929;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179310612 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1317;AVGPOST=0.9990;RSQ=0.9972;ERATE=0.0002;THETA=0.0093;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 179310615 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179310634 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0288;AVGPOST=0.9997;RSQ=0.9960;ERATE=0.0002;THETA=0.0012;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179310668 . GA G 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5905;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179310700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.968;LDAF=0.2295;AVGPOST=0.9748;RSQ=0.9495;ERATE=0.0047;THETA=0.0006;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 179310738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.954;LDAF=0.3453;AVGPOST=0.9563;RSQ=0.9279;ERATE=0.0069;THETA=0.0011;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 179310817 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.5904;ERATE=0.0006;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179310861 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0139;AVGPOST=0.9968;RSQ=0.9069;ERATE=0.0005;THETA=0.0015;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179310920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.2361;AVGPOST=0.9884;RSQ=0.9757;ERATE=0.0006;THETA=0.0010;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 179310932 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.887;LDAF=0.0170;AVGPOST=0.9949;RSQ=0.8901;ERATE=0.0003;THETA=0.0053;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179310975 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9128;ERATE=0.0002;THETA=0.0068;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179311096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0172;AVGPOST=0.9985;RSQ=0.9746;ERATE=0.0002;THETA=0.0186;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179311229 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0100;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179311255 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0056;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179311290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179311323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179311369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0097;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179311387 . A ATTCCC 445 PASS INDEL;BAVGPOST=0.983;BRSQ=0.551;LDAF=0.0275;AVGPOST=0.9745;RSQ=0.6335;ERATE=0.0015;THETA=0.0147;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179311458 . TTC T 44 PASS INDEL;BAVGPOST=0.990;BRSQ=0.507;LDAF=0.0169;AVGPOST=0.9817;RSQ=0.5692;ERATE=0.0027;THETA=0.0125;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179311494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.975;LDAF=0.4958;AVGPOST=0.9871;RSQ=0.9807;ERATE=0.0008;THETA=0.0035;AC=1081;AN=2184 GT:DS:GL:BD 0.49496338 0
1 179311538 . TTTG T 216 PASS INDEL;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8252;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179311571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5092;ERATE=0.0003;THETA=0.0091;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179311602 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.973;LDAF=0.8012;AVGPOST=0.9863;RSQ=0.9682;ERATE=0.0023;THETA=0.0069;AC=1753;AN=2184 GT:DS:GL:BD 0.80265570 1
1 179311674 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9631;ERATE=0.0003;THETA=0.0132;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179311866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179311991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179312009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0003;THETA=0.0036;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179312089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0122;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179312102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4886;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=1067;AN=2184 GT:DS:GL:BD 0.48855311 0
1 179312187 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179312235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4017;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0019;AC=877;AN=2184 GT:DS:GL:BD 0.40155679 0
1 179312249 rs11352806 AT A 37452 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4867;AVGPOST=0.9919;RSQ=0.9857;ERATE=0.0022;THETA=0.0004;AC=1063;AN=2184 GT:DS:GL:BD 0.48672161 0
1 179312350 . TTTTA T 49 PASS INDEL;BAVGPOST=0.999;BRSQ=0.522;LDAF=0.0042;AVGPOST=0.9957;RSQ=0.5494;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179312386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1483;AVGPOST=0.9972;RSQ=0.9916;ERATE=0.0005;THETA=0.0005;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 179312413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6335;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179312448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179312524 . T TA 1036 PASS INDEL;BAVGPOST=0.916;BRSQ=0.785;LDAF=0.2239;AVGPOST=0.9153;RSQ=0.8265;ERATE=0.0063;THETA=0.0003;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 179312525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.959;LDAF=0.3956;AVGPOST=0.9931;RSQ=0.9886;ERATE=0.0006;THETA=0.0002;AC=867;AN=2184 GT:DS:GL:BD 0.39697802 0
1 179312526 rs13306726 GT G 5822 PASS INDEL;BAVGPOST=0.937;BRSQ=0.836;LDAF=0.2287;AVGPOST=0.9649;RSQ=0.9290;ERATE=0.0011;THETA=0.0025;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 179312559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1751;AVGPOST=0.9986;RSQ=0.9960;ERATE=0.0005;THETA=0.0036;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 179312708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9847;ERATE=0.0002;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179312717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179312740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179312752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2519;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0006;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 179312856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8383;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179312904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179313039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9486;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179313130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0094;AVGPOST=0.9990;RSQ=0.9677;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179313234 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.778;LDAF=0.0047;AVGPOST=0.9981;RSQ=0.8295;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179313289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7759;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179313605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0072;AVGPOST=0.9992;RSQ=0.9570;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179313789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8824;ERATE=0.0003;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179313815 . C CA 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6291;ERATE=0.0004;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179313915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179313951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179314121 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179314143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179314168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179314212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179314242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179314250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0002;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179314373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179314583 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179314602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7173;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179314623 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4864;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=1063;AN=2184 GT:DS:GL:BD 0.48672161 0
1 179314641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0093;AVGPOST=0.9989;RSQ=0.9548;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179314720 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1745;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 179314724 . GTCTC G 1923 PASS INDEL;BAVGPOST=0.995;BRSQ=0.890;LDAF=0.0247;AVGPOST=0.9992;RSQ=0.9857;ERATE=0.0004;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179314793 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4298;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179314860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6182;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179314873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.4493;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179314946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.0825;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0002;THETA=0.0008;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 179315055 rs60347581 A AT 42882 PASS INDEL;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.4864;AVGPOST=0.9958;RSQ=0.9923;ERATE=0.0007;THETA=0.0008;AC=1061;AN=2184 GT:DS:GL:BD 0.48580587 0
1 179315057 . T TG 1310 PASS INDEL;BAVGPOST=0.800;BRSQ=0.609;LDAF=0.2760;AVGPOST=0.8265;RSQ=0.6996;ERATE=0.0093;THETA=0.0012;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 179315067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9196;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179315110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179315299 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.4853;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0004;THETA=0.0007;AC=1060;AN=2184 GT:DS:GL:BD 0.48534799 0
1 179315357 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6606;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0005;THETA=0.0005;AC=1443;AN=2184 GT:DS:GL:BD 0.66071427 1
1 179315672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8924;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179315738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8893;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=1942;AN=2184 GT:DS:GL:BD 0.88919413 1
1 179315785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1321;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0002;THETA=0.0006;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 179315824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7158;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179315837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179315898 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8893;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0002;THETA=0.0005;AC=1942;AN=2184 GT:DS:GL:BD 0.88919413 1
1 179316127 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.5651;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179316238 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.5303;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179316320 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.925;LDAF=0.7146;AVGPOST=0.9680;RSQ=0.9435;ERATE=0.0029;THETA=0.0012;AC=1569;AN=2184 GT:DS:GL:BD 0.71840662 1
1 179316345 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.952;LDAF=0.0510;AVGPOST=0.9981;RSQ=0.9840;ERATE=0.0003;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 179316367 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.974;LDAF=0.1489;AVGPOST=0.9965;RSQ=0.9890;ERATE=0.0008;THETA=0.0014;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 179316447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1099;AVGPOST=0.9975;RSQ=0.9893;ERATE=0.0005;THETA=0.0004;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 179316499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.975;LDAF=0.7228;AVGPOST=0.9631;RSQ=0.9293;ERATE=0.0081;THETA=0.0003;AC=1593;AN=2184 GT:DS:GL:BD 0.72939563 1
1 179316510 . A AAC 456 PASS INDEL;BAVGPOST=0.889;BRSQ=0.365;LDAF=0.1310;AVGPOST=0.8416;RSQ=0.4419;ERATE=0.0273;THETA=0.0005;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 179316687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 179316696 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179316801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179316848 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179316904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0137;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179317069 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1499;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 179317194 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179317226 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0116;AVGPOST=0.9971;RSQ=0.9150;ERATE=0.0003;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179317424 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0823;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0002;THETA=0.0002;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 179317529 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9108;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179317591 . ACT A 92 PASS INDEL;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6817;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179317647 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8997;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179317648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179317685 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179317709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5874;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179317710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0247;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0002;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179317712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1497;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0002;THETA=0.0014;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 179317736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8541;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179317923 . G GT 488 PASS INDEL;BAVGPOST=0.853;BRSQ=0.386;LDAF=0.1540;AVGPOST=0.8495;RSQ=0.5476;ERATE=0.0103;THETA=0.0005;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 179318010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179318093 . T TA 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0025;AVGPOST=0.9972;RSQ=0.5640;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179318123 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179318265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179318341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8788;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179318373 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5810;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179318430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179318433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179318480 rs59224937 T TG 1106 PASS INDEL;BAVGPOST=0.979;BRSQ=0.862;LDAF=0.0720;AVGPOST=0.9926;RSQ=0.9582;ERATE=0.0009;THETA=0.0005;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 179318613 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0074;AVGPOST=0.9993;RSQ=0.9536;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179318634 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.911;LDAF=0.7185;AVGPOST=0.9648;RSQ=0.9319;ERATE=0.0037;THETA=0.0004;AC=1585;AN=2184 GT:DS:GL:BD 0.72573262 1
1 179318689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5609;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179318690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.787;LDAF=0.0128;AVGPOST=0.9952;RSQ=0.8437;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179318699 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5697;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179318713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1461;AVGPOST=0.9934;RSQ=0.9817;ERATE=0.0005;THETA=0.0007;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 179318814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.9073;ERATE=0.0002;THETA=0.0029;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179318936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0055;AVGPOST=0.9992;RSQ=0.9440;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179319221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.924;LDAF=0.6059;AVGPOST=0.9687;RSQ=0.9578;ERATE=0.0035;THETA=0.0003;AC=1331;AN=2184 GT:DS:GL:BD 0.60943222 1
1 179319351 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179319531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179319541 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1700;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0003;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 179319544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179319580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7413;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1619;AN=2184 GT:DS:GL:BD 0.74130034 1
1 179319593 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179319594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179319631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179319816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7413;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0002;THETA=0.0003;AC=1619;AN=2184 GT:DS:GL:BD 0.74130034 1
1 179319868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2523;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 179319869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0002;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179319870 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179319955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8318;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179319956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179320089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9392;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179320183 . TTTTTTTTTTTTTG T 11703 PASS INDEL;BAVGPOST=0.736;BRSQ=0.473;LDAF=0.6373;AVGPOST=0.7116;RSQ=0.5068;ERATE=0.0513;THETA=0.0004;AC=1491;AN=2184 GT:DS:GL:BD 0.68269229 1
1 179320249 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.4885;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0004;THETA=0.0008;AC=1068;AN=2184 GT:DS:GL:BD 0.48901099 0
1 179320279 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.4827;AVGPOST=0.9933;RSQ=0.9900;ERATE=0.0005;THETA=0.0008;AC=1056;AN=2184 GT:DS:GL:BD 0.48351648 0
1 179320379 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179320477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179320492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179320578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1239;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 179320593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8613;ERATE=0.0029;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179320665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3789;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 179320750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179320758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0247;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0002;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179320798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8380;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179320845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4814;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=1051;AN=2184 GT:DS:GL:BD 0.48122710 0
1 179320957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7364;AVGPOST=0.9931;RSQ=0.9852;ERATE=0.0005;THETA=0.0010;AC=1610;AN=2184 GT:DS:GL:BD 0.73717946 1
1 179321130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9484;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179321164 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7224;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179321200 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8079;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179321201 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.7469;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179321226 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.927;LDAF=0.3513;AVGPOST=0.9669;RSQ=0.9452;ERATE=0.0031;THETA=0.0003;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 179321372 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4790;AVGPOST=0.9966;RSQ=0.9938;ERATE=0.0010;THETA=0.0006;AC=1046;AN=2184 GT:DS:GL:BD 0.47893772 0
1 179321401 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.490;LDAF=0.0080;AVGPOST=0.9910;RSQ=0.5376;ERATE=0.0012;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179321475 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179321493 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9357;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179321529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7694;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179321595 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9506;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179321618 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9716;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179321650 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4900;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179321707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179321718 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5552;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179321722 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0036;AVGPOST=0.9977;RSQ=0.7558;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179321839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179321882 . TA T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7196;ERATE=0.0005;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179321896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8345;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179321909 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179321911 rs112734165 CT C 1855 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9989;RSQ=0.9692;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179322078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1748;AVGPOST=0.9986;RSQ=0.9959;ERATE=0.0005;THETA=0.0009;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 179322239 . TATATATA T 454 PASS INDEL;BAVGPOST=0.993;BRSQ=0.669;LDAF=0.0356;AVGPOST=0.9624;RSQ=0.5701;ERATE=0.0029;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 179322245 . TA T 99 PASS INDEL;BAVGPOST=0.981;BRSQ=0.478;LDAF=0.0319;AVGPOST=0.9684;RSQ=0.6211;ERATE=0.0019;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179322278 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.174;LDAF=0.0115;AVGPOST=0.9805;RSQ=0.3076;ERATE=0.0013;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179322334 . TTATATATAAATA T 358 PASS INDEL;BAVGPOST=0.969;BRSQ=0.151;LDAF=0.0710;AVGPOST=0.8947;RSQ=0.3787;ERATE=0.0050;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 179322343 . A AATAT 4794 PASS INDEL;BAVGPOST=0.760;BRSQ=0.415;LDAF=0.7523;AVGPOST=0.7834;RSQ=0.5497;ERATE=0.0096;THETA=0.0005;AC=1758;AN=2184 GT:DS:GL:BD 0.80494505 1
1 179322558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0068;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0042;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179322575 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9852;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179322691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179322696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179322702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179322706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179322725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179322763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179322810 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0002;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179322836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179322889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179322901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8313;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179322932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179322998 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179323063 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179323144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179323210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179323243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8588;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179323269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0042;AVGPOST=0.9993;RSQ=0.9291;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179323493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0071;AVGPOST=0.9967;RSQ=0.8086;ERATE=0.0005;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179323510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8069;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179323616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5316;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179323738 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7416;AVGPOST=0.9977;RSQ=0.9949;ERATE=0.0006;THETA=0.0006;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 179323763 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.3485;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179323919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5664;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=1238;AN=2184 GT:DS:GL:BD 0.56684983 1
1 179323927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179324008 . AG A 2656 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0292;AVGPOST=0.9991;RSQ=0.9887;ERATE=0.0004;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179324028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0068;AVGPOST=0.9982;RSQ=0.8973;ERATE=0.0003;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179324066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4369;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179324133 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179324147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8679;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179324215 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7333;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179324269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179324376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0152;AVGPOST=0.9987;RSQ=0.9680;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179324433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7147;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179324488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8928;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179324514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9741;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179324553 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2568;AVGPOST=0.9988;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 179324648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0252;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179324665 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179324672 . C CTGTT 266 PASS INDEL;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0061;AVGPOST=0.9945;RSQ=0.6837;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179324697 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0057;AVGPOST=0.9981;RSQ=0.8652;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179324857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7411;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179324870 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.919;LDAF=0.2471;AVGPOST=0.9741;RSQ=0.9482;ERATE=0.0025;THETA=0.0023;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 179324921 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.810;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8602;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179325096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179325463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0823;AVGPOST=0.9991;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 179325506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4848;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0005;THETA=0.0004;AC=1058;AN=2184 GT:DS:GL:BD 0.48443222 0
1 179325506 . ATTTTG A 366 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5489;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179325633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.978;LDAF=0.7335;AVGPOST=0.9878;RSQ=0.9748;ERATE=0.0014;THETA=0.0003;AC=1606;AN=2184 GT:DS:GL:BD 0.73534799 1
1 179325729 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1485;AVGPOST=0.9983;RSQ=0.9948;ERATE=0.0004;THETA=0.0005;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 179325788 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8027;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179325823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7452;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179326065 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4854;AVGPOST=0.9886;RSQ=0.9816;ERATE=0.0020;THETA=0.0003;AC=1057;AN=2184 GT:DS:GL:BD 0.48397437 0
1 179326203 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0253;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0002;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179326226 . ACAC A 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7148;ERATE=0.0010;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179326323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7425;AVGPOST=0.9986;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 179326350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1744;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 179326393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.945;LDAF=0.1283;AVGPOST=0.9954;RSQ=0.9845;ERATE=0.0004;THETA=0.0002;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 179326397 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.7402;AVGPOST=0.9973;RSQ=0.9940;ERATE=0.0008;THETA=0.0005;AC=1619;AN=2184 GT:DS:GL:BD 0.74130034 1
1 179326578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.628;LDAF=0.0049;AVGPOST=0.9964;RSQ=0.7175;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179326587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1742;AVGPOST=0.9977;RSQ=0.9944;ERATE=0.0005;THETA=0.0004;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 179326708 rs75172223 TAC T 56866 PASS INDEL;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4868;AVGPOST=0.9783;RSQ=0.9661;ERATE=0.0052;THETA=0.0003;AC=1060;AN=2184 GT:DS:GL:BD 0.48534799 0
1 179326747 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7411;AVGPOST=0.9976;RSQ=0.9943;ERATE=0.0008;THETA=0.0003;AC=1619;AN=2184 GT:DS:GL:BD 0.74130034 1
1 179326840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0819;AVGPOST=0.9983;RSQ=0.9925;ERATE=0.0003;THETA=0.0002;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 179326846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7437;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179326890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.606;LDAF=0.0056;AVGPOST=0.9941;RSQ=0.6157;ERATE=0.0006;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179326893 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0036;AVGPOST=0.9964;RSQ=0.6583;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179326896 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0035;AVGPOST=0.9951;RSQ=0.4721;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179326925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0835;AVGPOST=0.9977;RSQ=0.9892;ERATE=0.0006;THETA=0.0004;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 179327017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4851;AVGPOST=0.9970;RSQ=0.9950;ERATE=0.0007;THETA=0.0003;AC=1058;AN=2184 GT:DS:GL:BD 0.48443222 0
1 179327025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9392;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179327046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179327071 rs71111915 C CA 11142 PASS INDEL;BAVGPOST=0.982;BRSQ=0.944;LDAF=0.1724;AVGPOST=0.9561;RSQ=0.8818;ERATE=0.0100;THETA=0.0003;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 179327136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179327327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0431;AVGPOST=0.9994;RSQ=0.9938;ERATE=0.0004;THETA=0.0004;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 179327412 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0253;AVGPOST=0.9997;RSQ=0.9947;ERATE=0.0002;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179327460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179327531 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.7054;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179327591 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1490;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 179327890 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179327958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1731;AVGPOST=0.9959;RSQ=0.9895;ERATE=0.0005;THETA=0.0006;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 179327966 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6698;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179328031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0100;AVGPOST=0.9954;RSQ=0.8143;ERATE=0.0007;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179328044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6412;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179328058 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.913;LDAF=0.0711;AVGPOST=0.9948;RSQ=0.9699;ERATE=0.0004;THETA=0.0003;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 179328106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5607;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179328110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.691;LDAF=0.0059;AVGPOST=0.9968;RSQ=0.7835;ERATE=0.0005;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179328191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.638;LDAF=0.0042;AVGPOST=0.9967;RSQ=0.6740;ERATE=0.0006;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179328244 . A AT 35 PASS INDEL;BAVGPOST=0.992;BRSQ=0.476;LDAF=0.0077;AVGPOST=0.9901;RSQ=0.4685;ERATE=0.0017;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179328245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1476;AVGPOST=0.9937;RSQ=0.9817;ERATE=0.0009;THETA=0.0004;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 179328547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1458;AVGPOST=0.9970;RSQ=0.9904;ERATE=0.0004;THETA=0.0002;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 179328583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.6799;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179328637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179328827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8763;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179328832 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179328976 . CT C 4043 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0276;AVGPOST=0.9994;RSQ=0.9900;ERATE=0.0004;THETA=0.0001;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179328981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8886;AVGPOST=0.9979;RSQ=0.9903;ERATE=0.0007;THETA=0.0027;AC=1942;AN=2184 GT:DS:GL:BD 0.88919413 1
1 179329041 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8891;AVGPOST=0.9992;RSQ=0.9962;ERATE=0.0004;THETA=0.0007;AC=1942;AN=2184 GT:DS:GL:BD 0.88919413 1
1 179329068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.778;LDAF=0.0114;AVGPOST=0.9936;RSQ=0.7887;ERATE=0.0005;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179329112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.3760;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179329126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3747;AVGPOST=0.9961;RSQ=0.9923;ERATE=0.0004;THETA=0.0006;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 179329157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0060;AVGPOST=0.9975;RSQ=0.8241;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179329198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7402;AVGPOST=0.9973;RSQ=0.9937;ERATE=0.0008;THETA=0.0008;AC=1618;AN=2184 GT:DS:GL:BD 0.74084246 1
1 179329269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8160;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179329418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179329492 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0176;AVGPOST=0.9992;RSQ=0.9808;ERATE=0.0002;THETA=0.0024;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179329493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8282;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179329512 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7624;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179329517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0071;AVGPOST=0.9979;RSQ=0.8745;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179329556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7419;AVGPOST=0.9976;RSQ=0.9946;ERATE=0.0005;THETA=0.0005;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 179329615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.947;LDAF=0.7151;AVGPOST=0.9519;RSQ=0.9100;ERATE=0.0071;THETA=0.0003;AC=1587;AN=2184 GT:DS:GL:BD 0.72664833 1
1 179329662 MERGED_DEL_2_6436 GTTTCACCATGTTGGCCAGTATGGTCTTGAACTCCTGACCTCAAGTGATCAACCCGCCTCAGCCTACCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACTCAGCCAAATTTCTCTTCTTTATAAAGTACCCAGTCCCAGGTATTCTGTTATGGCAGCTCAGATGAAGATGCCCTTTCTCCAAAGAAT GG . . SV;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0827;AVGPOST=0.9970;RSQ=0.9836;ERATE=0.0005;THETA=0.0122;CIEND=-67,86;CIPOS=-97,60;END=179333854;HOMLEN=2;HOMSEQ=TT;SOURCE=BreakDancer_179329714_179333746 GT:DS:GL:BD 0.08241758 0
1 179329899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1539;AVGPOST=0.9950;RSQ=0.9870;ERATE=0.0003;THETA=0.0002;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 179329947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.7148;AVGPOST=0.9908;RSQ=0.9858;ERATE=0.0004;THETA=0.0003;AC=1563;AN=2184 GT:DS:GL:BD 0.71565932 1
1 179329980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5966;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179330125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7241;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179330173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1596;AVGPOST=0.9944;RSQ=0.9867;ERATE=0.0003;THETA=0.0011;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 179330235 . CAGT C 172 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7327;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179330285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.745;LDAF=0.0048;AVGPOST=0.9965;RSQ=0.7595;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179330326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7610;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179330341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179330361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6853;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179330413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5332;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179330483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.887;LDAF=0.0177;AVGPOST=0.9971;RSQ=0.9528;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179330506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4706;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179330584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.976;LDAF=0.5343;AVGPOST=0.9877;RSQ=0.9824;ERATE=0.0007;THETA=0.0004;AC=1167;AN=2184 GT:DS:GL:BD 0.53434068 1
1 179330800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.978;LDAF=0.7127;AVGPOST=0.9881;RSQ=0.9816;ERATE=0.0006;THETA=0.0006;AC=1558;AN=2184 GT:DS:GL:BD 0.71336997 1
1 179330824 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.744;LDAF=0.0037;AVGPOST=0.9962;RSQ=0.6024;ERATE=0.0008;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179330941 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179331001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.7151;AVGPOST=0.9916;RSQ=0.9870;ERATE=0.0003;THETA=0.0008;AC=1563;AN=2184 GT:DS:GL:BD 0.71565932 1
1 179331079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.921;LDAF=0.3911;AVGPOST=0.9793;RSQ=0.9673;ERATE=0.0008;THETA=0.0005;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 179331157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0133;AVGPOST=0.9888;RSQ=0.6963;ERATE=0.0006;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179331222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.777;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9565;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179331263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.463;LDAF=0.0082;AVGPOST=0.9910;RSQ=0.5655;ERATE=0.0007;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179331293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.959;LDAF=0.5326;AVGPOST=0.9637;RSQ=0.9457;ERATE=0.0035;THETA=0.0004;AC=1167;AN=2184 GT:DS:GL:BD 0.53434068 1
1 179331327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4138;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179331485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0326;AVGPOST=0.9935;RSQ=0.9324;ERATE=0.0003;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 179331494 rs67563284 CCTTAT C 20403 PASS INDEL;BAVGPOST=0.989;BRSQ=0.964;LDAF=0.1528;AVGPOST=0.9933;RSQ=0.9812;ERATE=0.0005;THETA=0.0005;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 179331513 . A AT 153 PASS INDEL;BAVGPOST=0.998;BRSQ=0.621;LDAF=0.0063;AVGPOST=0.9931;RSQ=0.5759;ERATE=0.0007;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179331527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0254;AVGPOST=0.9995;RSQ=0.9916;ERATE=0.0002;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179331533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5457;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179331541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.967;LDAF=0.8779;AVGPOST=0.9936;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=1918;AN=2184 GT:DS:GL:BD 0.87820512 1
1 179331577 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.969;LDAF=0.8775;AVGPOST=0.9936;RSQ=0.9810;ERATE=0.0005;THETA=0.0004;AC=1917;AN=2184 GT:DS:GL:BD 0.87774724 1
1 179331596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5142;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179331607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0287;AVGPOST=0.9992;RSQ=0.9881;ERATE=0.0003;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179331756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0287;AVGPOST=0.9992;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179331841 . C CT 2221 PASS INDEL;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0295;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0003;THETA=0.0010;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179331861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8192;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179331963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0185;AVGPOST=0.9959;RSQ=0.9263;ERATE=0.0004;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179332030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6819;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179332043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.7026;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179332166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9503;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179332240 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179332282 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5372;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179332320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.878;LDAF=0.0345;AVGPOST=0.9941;RSQ=0.9518;ERATE=0.0003;THETA=0.0022;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 179332445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4861;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179332668 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.846;LDAF=0.0102;AVGPOST=0.9962;RSQ=0.8432;ERATE=0.0008;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179332681 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0046;AVGPOST=0.9992;RSQ=0.9556;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179332687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5706;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179333098 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1601;AVGPOST=0.9938;RSQ=0.9847;ERATE=0.0004;THETA=0.0017;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 179333107 . C CT 201 PASS INDEL;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0047;AVGPOST=0.9977;RSQ=0.7769;ERATE=0.0006;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179333135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8217;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179333154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9662;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179333194 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.971;LDAF=0.8779;AVGPOST=0.9941;RSQ=0.9819;ERATE=0.0003;THETA=0.0012;AC=1918;AN=2184 GT:DS:GL:BD 0.87820512 1
1 179333454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.281;LDAF=0.0074;AVGPOST=0.9925;RSQ=0.6064;ERATE=0.0012;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179333489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0304;AVGPOST=0.9955;RSQ=0.9423;ERATE=0.0008;THETA=0.0036;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 179333678 . T TG 343 PASS INDEL;BAVGPOST=0.721;BRSQ=0.177;LDAF=0.2311;AVGPOST=0.7385;RSQ=0.3986;ERATE=0.0223;THETA=0.0050;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 179333872 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.159;LDAF=0.9546;AVGPOST=0.9399;RSQ=0.4862;ERATE=0.0045;THETA=0.0018;AC=2115;AN=2184 GT:DS:GL:BD 0.96840662 1
1 179333940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0032;AVGPOST=0.9946;RSQ=0.3592;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179333949 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0284;AVGPOST=0.9987;RSQ=0.9825;ERATE=0.0003;THETA=0.0010;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179333952 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0284;AVGPOST=0.9995;RSQ=0.9924;ERATE=0.0003;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179334012 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.777;LDAF=0.0354;AVGPOST=0.9905;RSQ=0.8935;ERATE=0.0005;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 179334048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0275;AVGPOST=0.9995;RSQ=0.9920;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179334110 . TA T 7611 PASS INDEL;BAVGPOST=0.995;BRSQ=0.970;LDAF=0.0802;AVGPOST=0.9958;RSQ=0.9821;ERATE=0.0004;THETA=0.0024;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 179334127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.6976;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179334130 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.905;LDAF=0.0172;AVGPOST=0.9995;RSQ=0.9844;ERATE=0.0004;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179334252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1475;AVGPOST=0.9972;RSQ=0.9908;ERATE=0.0006;THETA=0.0003;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179334279 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0271;AVGPOST=0.9979;RSQ=0.9719;ERATE=0.0004;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179334337 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.918;LDAF=0.0554;AVGPOST=0.9883;RSQ=0.9143;ERATE=0.0006;THETA=0.0013;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 179334414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.359;LDAF=0.0049;AVGPOST=0.9931;RSQ=0.4413;ERATE=0.0013;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179334526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0277;AVGPOST=0.9993;RSQ=0.9891;ERATE=0.0003;THETA=0.0047;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179334712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.5084;AVGPOST=0.9927;RSQ=0.9878;ERATE=0.0012;THETA=0.0003;AC=1113;AN=2184 GT:DS:GL:BD 0.50961536 1
1 179334758 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0276;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179334794 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0255;AVGPOST=0.9992;RSQ=0.9906;ERATE=0.0002;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179334801 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4850;AVGPOST=0.9968;RSQ=0.9946;ERATE=0.0005;THETA=0.0003;AC=1058;AN=2184 GT:DS:GL:BD 0.48443222 0
1 179334832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0276;AVGPOST=0.9991;RSQ=0.9856;ERATE=0.0004;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179334840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5122;AVGPOST=0.9967;RSQ=0.9943;ERATE=0.0008;THETA=0.0005;AC=1118;AN=2184 GT:DS:GL:BD 0.51190478 1
1 179334893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.595;LDAF=0.0042;AVGPOST=0.9956;RSQ=0.5839;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179334917 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5107;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0004;THETA=0.0006;AC=1115;AN=2184 GT:DS:GL:BD 0.51053113 1
1 179334934 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1469;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0002;THETA=0.0006;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179334984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.8888;AVGPOST=0.9981;RSQ=0.9912;ERATE=0.0006;THETA=0.0004;AC=1941;AN=2184 GT:DS:GL:BD 0.88873625 1
1 179335045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7251;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179335058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.5078;AVGPOST=0.9964;RSQ=0.9939;ERATE=0.0006;THETA=0.0006;AC=1108;AN=2184 GT:DS:GL:BD 0.50732601 1
1 179335138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.843;LDAF=0.1932;AVGPOST=0.9697;RSQ=0.9312;ERATE=0.0004;THETA=0.0005;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 179335139 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0250;AVGPOST=0.9997;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179335158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5089;AVGPOST=0.9954;RSQ=0.9921;ERATE=0.0007;THETA=0.0006;AC=1111;AN=2184 GT:DS:GL:BD 0.50869966 1
1 179335162 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5082;AVGPOST=0.9962;RSQ=0.9938;ERATE=0.0006;THETA=0.0004;AC=1111;AN=2184 GT:DS:GL:BD 0.50869966 1
1 179335187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0022;AVGPOST=0.9968;RSQ=0.4455;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179335263 rs112230056 T TC 17359 PASS INDEL;BAVGPOST=0.907;BRSQ=0.858;LDAF=0.5422;AVGPOST=0.9396;RSQ=0.9171;ERATE=0.0013;THETA=0.0003;AC=1208;AN=2184 GT:DS:GL:BD 0.55311358 1
1 179335264 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.831;BRSQ=0.743;LDAF=0.4782;AVGPOST=0.8370;RSQ=0.7776;ERATE=0.0117;THETA=0.0004;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 179335264 rs66951511 A AG 16296 PASS INDEL;BAVGPOST=0.906;BRSQ=0.857;LDAF=0.5442;AVGPOST=0.9498;RSQ=0.9323;ERATE=0.0006;THETA=0.0003;AC=1215;AN=2184 GT:DS:GL:BD 0.55631870 1
1 179335265 rs113409288 T TG 18523 PASS INDEL;BAVGPOST=0.906;BRSQ=0.856;LDAF=0.5389;AVGPOST=0.9372;RSQ=0.9129;ERATE=0.0017;THETA=0.0005;AC=1203;AN=2184 GT:DS:GL:BD 0.55082417 1
1 179335318 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7609;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179335366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5928;AVGPOST=0.9974;RSQ=0.9957;ERATE=0.0005;THETA=0.0006;AC=1294;AN=2184 GT:DS:GL:BD 0.59249085 1
1 179335418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.908;LDAF=0.0118;AVGPOST=0.9988;RSQ=0.9559;ERATE=0.0002;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179335515 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.963;LDAF=0.0858;AVGPOST=0.9911;RSQ=0.9620;ERATE=0.0020;THETA=0.0099;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 179335607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179335625 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179335664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179335748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179335755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179335913 rs111586901 AG A 11343 PASS INDEL;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0794;AVGPOST=0.9965;RSQ=0.9832;ERATE=0.0004;THETA=0.0004;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 179335929 rs71831401 ACTC A 50840 PASS INDEL;BAVGPOST=0.986;BRSQ=0.975;LDAF=0.5004;AVGPOST=0.9894;RSQ=0.9831;ERATE=0.0007;THETA=0.0004;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 179335952 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.977;LDAF=0.5849;AVGPOST=0.9922;RSQ=0.9885;ERATE=0.0003;THETA=0.0004;AC=1277;AN=2184 GT:DS:GL:BD 0.58470696 1
1 179335960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.976;LDAF=0.4710;AVGPOST=0.9912;RSQ=0.9868;ERATE=0.0005;THETA=0.0004;AC=1030;AN=2184 GT:DS:GL:BD 0.47161171 0
1 179335974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.981;LDAF=0.4996;AVGPOST=0.9927;RSQ=0.9896;ERATE=0.0004;THETA=0.0024;AC=1090;AN=2184 GT:DS:GL:BD 0.49908423 0
1 179336009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5538;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179336031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6981;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179336238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5090;AVGPOST=0.9960;RSQ=0.9940;ERATE=0.0006;THETA=0.0005;AC=1112;AN=2184 GT:DS:GL:BD 0.50915754 1
1 179336329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4814;AVGPOST=0.9974;RSQ=0.9952;ERATE=0.0007;THETA=0.0005;AC=1052;AN=2184 GT:DS:GL:BD 0.48168498 0
1 179336419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179336505 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.4571;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179336532 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0072;AVGPOST=0.9956;RSQ=0.7735;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179336613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8294;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179336650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.5944;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179336780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=0.9983;RSQ=0.9762;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179336910 . TAAGAGAAACTCA T 159 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179336996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5942;AVGPOST=0.9977;RSQ=0.9957;ERATE=0.0006;THETA=0.0006;AC=1298;AN=2184 GT:DS:GL:BD 0.59432232 1
1 179337080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9278;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179337118 . TC T 35897 PASS INDEL;BAVGPOST=0.995;BRSQ=0.338;LDAF=0.9907;AVGPOST=0.9897;RSQ=0.5320;ERATE=0.0011;THETA=0.0005;AC=2170;AN=2184 GT:DS:GL:BD 0.99358976 1
1 179337119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.822;LDAF=0.1446;AVGPOST=0.9199;RSQ=0.7612;ERATE=0.0257;THETA=0.0004;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 179337190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0849;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0026;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 179337214 rs112514029 AATAAAC A 13591 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0854;AVGPOST=0.9982;RSQ=0.9903;ERATE=0.0007;THETA=0.0004;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 179337222 . TAA T 541 PASS INDEL;BAVGPOST=0.974;BRSQ=0.821;LDAF=0.0705;AVGPOST=0.9888;RSQ=0.9418;ERATE=0.0005;THETA=0.0006;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 179337276 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9413;ERATE=0.0002;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179337280 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179337288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0274;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0002;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179337336 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0071;AVGPOST=0.9996;RSQ=0.9724;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179337379 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179337634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179337691 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7758;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179337799 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0002;THETA=0.0037;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179337922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179337954 . G GA 29 PASS INDEL;BAVGPOST=0.996;BRSQ=0.522;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3872;ERATE=0.0008;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179337973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179338046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9712;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179338048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179338081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8499;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179338129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179338192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179338327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1526;AVGPOST=0.9959;RSQ=0.9896;ERATE=0.0003;THETA=0.0008;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 179338404 . AGTTTCGCCAT A 4713 PASS INDEL;BAVGPOST=0.995;BRSQ=0.911;LDAF=0.0271;AVGPOST=0.9976;RSQ=0.9687;ERATE=0.0003;THETA=0.0058;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179338423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179338520 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.940;LDAF=0.0588;AVGPOST=0.9865;RSQ=0.9097;ERATE=0.0019;THETA=0.0003;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 179338559 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0263;AVGPOST=0.9988;RSQ=0.9826;ERATE=0.0003;THETA=0.0020;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179338591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7749;ERATE=0.0002;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179338612 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0112;AVGPOST=0.9969;RSQ=0.8877;ERATE=0.0004;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179338660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0033;AVGPOST=0.9972;RSQ=0.6611;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179338695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0149;AVGPOST=0.9970;RSQ=0.9296;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179338786 rs77080758 CA C 18615 PASS INDEL;BAVGPOST=0.907;BRSQ=0.750;LDAF=0.7466;AVGPOST=0.8270;RSQ=0.6401;ERATE=0.0280;THETA=0.0009;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 179338797 . AAT A 6751 PASS INDEL;BAVGPOST=0.929;BRSQ=0.849;LDAF=0.2360;AVGPOST=0.9341;RSQ=0.8696;ERATE=0.0051;THETA=0.0024;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 179338909 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0092;AVGPOST=0.9996;RSQ=0.9818;ERATE=0.0003;THETA=0.0001;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179338984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179339051 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0274;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0065;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179339084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179339113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179339229 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0370;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 179339254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179339262 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1568;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 179339334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6875;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=1501;AN=2184 GT:DS:GL:BD 0.68727106 1
1 179339415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3519;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0045;AC=768;AN=2184 GT:DS:GL:BD 0.35164836 0
1 179339457 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0274;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179339674 . C CT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.4672;ERATE=0.0002;THETA=0.0061;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179339760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0004;THETA=0.0034;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179339819 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179339829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5527;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179339849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0041;AVGPOST=0.9987;RSQ=0.8771;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179339859 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179339902 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179340042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0461;AVGPOST=0.9996;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 179340073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.6305;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179340098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0002;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179340155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179340163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8553;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179340239 rs59238300 TA T 22593 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1819;AVGPOST=0.9961;RSQ=0.9898;ERATE=0.0004;THETA=0.0027;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 179340295 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7475;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179340454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7877;ERATE=0.0005;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179340485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.957;LDAF=0.5309;AVGPOST=0.9860;RSQ=0.9813;ERATE=0.0006;THETA=0.0002;AC=1159;AN=2184 GT:DS:GL:BD 0.53067768 1
1 179340492 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8321;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179340501 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.917;LDAF=0.0270;AVGPOST=0.9958;RSQ=0.9342;ERATE=0.0007;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 179340667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7380;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179340685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179340726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179340773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0002;THETA=0.0036;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179340775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8757;AVGPOST=0.9985;RSQ=0.9947;ERATE=0.0003;THETA=0.0001;AC=1912;AN=2184 GT:DS:GL:BD 0.87545788 1
1 179340961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8147;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179340991 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7966;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179341012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0099;AVGPOST=0.9992;RSQ=0.9658;ERATE=0.0003;THETA=0.0013;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179341026 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6909;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179341056 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179341073 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7698;AVGPOST=0.9983;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=1680;AN=2184 GT:DS:GL:BD 0.76923078 1
1 179341104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179341119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8765;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0004;THETA=0.0012;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 179341187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6026;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0005;THETA=0.0007;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 179341210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179341229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3527;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 179341350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.2671;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179341355 . A AT 56 PASS INDEL;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179341366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179341444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1466;AVGPOST=0.9986;RSQ=0.9952;ERATE=0.0005;THETA=0.0002;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 179341449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9757;ERATE=0.0002;THETA=0.0016;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179341470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9627;ERATE=0.0003;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179341503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1631;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0004;THETA=0.0017;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 179341564 . G GA 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3450;ERATE=0.0005;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179341662 . CAAAT C 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4099;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179341682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8378;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179341702 . CAA C 279 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8662;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179341708 rs61147874 TG T 15338 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1654;AVGPOST=0.9968;RSQ=0.9910;ERATE=0.0006;THETA=0.0003;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 179341746 . A AT 348 PASS INDEL;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8004;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179341756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6151;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179341810 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1639;AVGPOST=0.9973;RSQ=0.9920;ERATE=0.0004;THETA=0.0002;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 179341812 . A AATT 122 PASS INDEL;BAVGPOST=0.997;BRSQ=0.602;LDAF=0.0073;AVGPOST=0.9926;RSQ=0.5963;ERATE=0.0008;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179341999 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.843;LDAF=0.6978;AVGPOST=0.9347;RSQ=0.8948;ERATE=0.0049;THETA=0.0003;AC=1540;AN=2184 GT:DS:GL:BD 0.70512819 1
1 179342168 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6643;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179342312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5918;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179342408 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0049;AVGPOST=0.9951;RSQ=0.6096;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179342430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.716;LDAF=0.0051;AVGPOST=0.9991;RSQ=0.9099;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179342552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.9008;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179342634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1043;AVGPOST=0.9988;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 179342753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.854;LDAF=0.6693;AVGPOST=0.8918;RSQ=0.8374;ERATE=0.0125;THETA=0.0004;AC=1510;AN=2184 GT:DS:GL:BD 0.69139194 1
1 179342765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0122;AVGPOST=0.9975;RSQ=0.9056;ERATE=0.0006;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179342776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.920;LDAF=0.3559;AVGPOST=0.9707;RSQ=0.9520;ERATE=0.0022;THETA=0.0005;AC=789;AN=2184 GT:DS:GL:BD 0.36126372 0
1 179342848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.913;LDAF=0.1424;AVGPOST=0.9882;RSQ=0.9639;ERATE=0.0006;THETA=0.0004;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 179343066 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8150;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179343120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179343145 . C CA 20 PASS INDEL;BAVGPOST=0.999;BRSQ=0.487;LDAF=0.0084;AVGPOST=0.9896;RSQ=0.5351;ERATE=0.0007;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179343146 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0070;AVGPOST=0.9986;RSQ=0.9147;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179343202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.964;LDAF=0.1394;AVGPOST=0.9915;RSQ=0.9744;ERATE=0.0004;THETA=0.0002;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 179343203 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.964;LDAF=0.1389;AVGPOST=0.9920;RSQ=0.9749;ERATE=0.0003;THETA=0.0004;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 179343224 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.880;BRSQ=0.828;LDAF=0.4850;AVGPOST=0.8907;RSQ=0.8555;ERATE=0.0138;THETA=0.0002;AC=1107;AN=2184 GT:DS:GL:BD 0.50686812 1
1 179343285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8374;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179343295 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4155;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179343392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.963;LDAF=0.1064;AVGPOST=0.9990;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 179343567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4553;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179343587 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7717;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179343628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.0580;AVGPOST=0.9968;RSQ=0.9797;ERATE=0.0004;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 179343654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7540;ERATE=0.0003;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179343777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5167;AVGPOST=0.9915;RSQ=0.9877;ERATE=0.0014;THETA=0.0001;AC=1128;AN=2184 GT:DS:GL:BD 0.51648355 1
1 179343803 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6365;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179343938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.978;LDAF=0.1679;AVGPOST=0.9950;RSQ=0.9855;ERATE=0.0005;THETA=0.0004;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 179343958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.500;LDAF=0.0068;AVGPOST=0.9920;RSQ=0.5665;ERATE=0.0009;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179344191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6016;AVGPOST=0.9838;RSQ=0.9741;ERATE=0.0029;THETA=0.0014;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 179344232 . A AT 12221 PASS INDEL;BAVGPOST=0.976;BRSQ=0.938;LDAF=0.7551;AVGPOST=0.9804;RSQ=0.9591;ERATE=0.0018;THETA=0.0004;AC=1655;AN=2184 GT:DS:GL:BD 0.75778389 1
1 179344233 . TA T 587 PASS INDEL;BAVGPOST=0.878;BRSQ=0.374;LDAF=0.1413;AVGPOST=0.8343;RSQ=0.4528;ERATE=0.0172;THETA=0.0002;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 179344234 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.912;BRSQ=0.829;LDAF=0.6991;AVGPOST=0.9218;RSQ=0.8615;ERATE=0.0078;THETA=0.0007;AC=1558;AN=2184 GT:DS:GL:BD 0.71336997 1
1 179344243 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.944;LDAF=0.2053;AVGPOST=0.9449;RSQ=0.8838;ERATE=0.0076;THETA=0.0012;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 179344273 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0101;AVGPOST=0.9899;RSQ=0.6326;ERATE=0.0006;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179344328 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0289;AVGPOST=0.9974;RSQ=0.9637;ERATE=0.0004;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179344336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1631;AVGPOST=0.9920;RSQ=0.9766;ERATE=0.0005;THETA=0.0012;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 179344358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.925;LDAF=0.1499;AVGPOST=0.9771;RSQ=0.9310;ERATE=0.0027;THETA=0.0003;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 179344481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1609;AVGPOST=0.9955;RSQ=0.9870;ERATE=0.0007;THETA=0.0002;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 179344535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8901;ERATE=0.0005;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179344548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0109;AVGPOST=0.9973;RSQ=0.9012;ERATE=0.0004;THETA=0.0041;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179344628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.762;LDAF=0.0121;AVGPOST=0.9918;RSQ=0.7489;ERATE=0.0006;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179344634 rs5779020 CAT C 19105 PASS INDEL;BAVGPOST=0.991;BRSQ=0.972;LDAF=0.1656;AVGPOST=0.9915;RSQ=0.9775;ERATE=0.0006;THETA=0.0006;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 179344636 rs5779020 TATA T 428 PASS INDEL;BAVGPOST=0.998;BRSQ=0.750;LDAF=0.0057;AVGPOST=0.9964;RSQ=0.7594;ERATE=0.0006;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179344638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.3543;AVGPOST=0.9878;RSQ=0.9796;ERATE=0.0019;THETA=0.0009;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 179344707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6485;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179344728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0039;AVGPOST=0.9960;RSQ=0.5728;ERATE=0.0006;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179344753 . TAC T 34660 PASS INDEL;BAVGPOST=0.973;BRSQ=0.953;LDAF=0.4762;AVGPOST=0.9677;RSQ=0.9508;ERATE=0.0061;THETA=0.0004;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 179344761 rs72089094 CAT C 13740 PASS INDEL;BAVGPOST=0.925;BRSQ=0.853;LDAF=0.4306;AVGPOST=0.9137;RSQ=0.8633;ERATE=0.0080;THETA=0.0006;AC=963;AN=2184 GT:DS:GL:BD 0.44093406 0
1 179344793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4623;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179344799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8247;ERATE=0.0003;THETA=0.0043;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179344869 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2035;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 179344934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179344961 . A AT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0054;AVGPOST=0.9948;RSQ=0.6218;ERATE=0.0006;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179344971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179345075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9632;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179345087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0002;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179345169 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0174;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0002;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179345181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0103;AVGPOST=0.9979;RSQ=0.9320;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179345190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9438;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179345205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9985;RSQ=0.8875;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179345287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3777;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0006;THETA=0.0014;AC=824;AN=2184 GT:DS:GL:BD 0.37728938 0
1 179345406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6380;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179345455 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0056;AVGPOST=0.9936;RSQ=0.5637;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179345466 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179345488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0073;AVGPOST=0.9981;RSQ=0.8972;ERATE=0.0004;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179345581 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3778;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0006;THETA=0.0002;AC=824;AN=2184 GT:DS:GL:BD 0.37728938 0
1 179345594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0083;AVGPOST=0.9994;RSQ=0.9677;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179345621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0178;AVGPOST=0.9997;RSQ=0.9924;ERATE=0.0003;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179345635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8761;AVGPOST=0.9987;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 179345649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179345673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179345722 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179345751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2066;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 179345758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8766;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0002;THETA=0.0003;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 179345901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9666;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179345972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1645;AVGPOST=0.9983;RSQ=0.9952;ERATE=0.0004;THETA=0.0007;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 179346032 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0054;AVGPOST=0.9987;RSQ=0.9114;ERATE=0.0003;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179346042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9612;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179346230 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0177;AVGPOST=0.9993;RSQ=0.9827;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179346233 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.4688;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179346265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2020;AVGPOST=0.9982;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 179346288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0058;AVGPOST=0.9988;RSQ=0.9104;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179346298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0060;AVGPOST=0.9988;RSQ=0.9227;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179346307 . T TCTGC 229 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7286;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179346325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179346327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7253;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179346387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179346613 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6012;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 179346638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9375;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179346640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5968;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179346780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9272;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179346828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7672;AVGPOST=0.9988;RSQ=0.9969;ERATE=0.0006;THETA=0.0002;AC=1675;AN=2184 GT:DS:GL:BD 0.76694137 1
1 179347025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0190;AVGPOST=0.9971;RSQ=0.9431;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179347055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6574;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179347107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0157;AVGPOST=0.9985;RSQ=0.9653;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179347110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4617;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179347111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6015;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179347169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179347176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4616;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179347189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0254;AVGPOST=0.9992;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179347196 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.847;LDAF=0.0121;AVGPOST=0.9970;RSQ=0.9009;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179347205 . T TG 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.6279;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179347353 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8163;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179347476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8291;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179347530 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2066;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 179347679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179347681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0229;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 179347698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179347832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5126;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0025;THETA=0.0003;AC=1119;AN=2184 GT:DS:GL:BD 0.51236266 1
1 179347852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179347889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179347942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179348064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0253;AVGPOST=0.9997;RSQ=0.9955;ERATE=0.0002;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179348065 . G GTAT 217 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4487;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179348170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3747;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 179348317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179348346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179348455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0002;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179348535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179348625 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179348626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179348647 . G GC 6968 PASS INDEL;BAVGPOST=0.993;BRSQ=0.979;LDAF=0.2012;AVGPOST=0.9897;RSQ=0.9749;ERATE=0.0011;THETA=0.0003;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 179348656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179348666 . TG T 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4739;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179348681 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9859;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179348688 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179348875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6143;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179348903 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0177;AVGPOST=0.9989;RSQ=0.9712;ERATE=0.0004;THETA=0.0014;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179349005 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9389;ERATE=0.0002;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179349079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179349094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6524;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179349173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5030;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179349252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.928;BRSQ=0.567;LDAF=0.9143;AVGPOST=0.9251;RSQ=0.6841;ERATE=0.0056;THETA=0.0002;AC=2035;AN=2184 GT:DS:GL:BD 0.93177658 1
1 179349355 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.647;LDAF=0.0135;AVGPOST=0.9927;RSQ=0.7713;ERATE=0.0005;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179349362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.878;LDAF=0.0234;AVGPOST=0.9922;RSQ=0.8716;ERATE=0.0004;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 179349379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2255;AVGPOST=0.9963;RSQ=0.9917;ERATE=0.0007;THETA=0.0003;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 179349383 . C CA 105 PASS INDEL;BAVGPOST=0.978;BRSQ=0.387;LDAF=0.0310;AVGPOST=0.9623;RSQ=0.5137;ERATE=0.0061;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179349438 . TA T 594 PASS INDEL;BAVGPOST=0.866;BRSQ=0.724;LDAF=0.2832;AVGPOST=0.8885;RSQ=0.8145;ERATE=0.0023;THETA=0.0003;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 179349442 rs11301477 AG A 34801 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3520;AVGPOST=0.9975;RSQ=0.9950;ERATE=0.0007;THETA=0.0034;AC=768;AN=2184 GT:DS:GL:BD 0.35164836 0
1 179349508 . GAA G 31 PASS INDEL;BAVGPOST=0.993;BRSQ=0.322;LDAF=0.0045;AVGPOST=0.9960;RSQ=0.6185;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179349559 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1041;AVGPOST=0.9989;RSQ=0.9952;ERATE=0.0004;THETA=0.0006;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 179349645 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9997;RSQ=0.9914;ERATE=0.0002;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179349843 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3788;AVGPOST=0.9966;RSQ=0.9948;ERATE=0.0005;THETA=0.0003;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 179349955 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.8756;AVGPOST=0.9973;RSQ=0.9896;ERATE=0.0004;THETA=0.0004;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 179350018 . CTT C 146 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5968;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179350047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6587;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179350132 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0276;AVGPOST=0.9996;RSQ=0.9939;ERATE=0.0003;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179350261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0099;AVGPOST=0.9973;RSQ=0.8929;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179350278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.861;LDAF=0.0275;AVGPOST=0.9975;RSQ=0.9642;ERATE=0.0005;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 179350396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.727;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8087;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179350397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1665;AVGPOST=0.9906;RSQ=0.9745;ERATE=0.0013;THETA=0.0006;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 179350412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0437;AVGPOST=0.9982;RSQ=0.9818;ERATE=0.0004;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 179350423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.928;LDAF=0.1537;AVGPOST=0.9883;RSQ=0.9669;ERATE=0.0006;THETA=0.0002;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 179350542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1628;AVGPOST=0.9967;RSQ=0.9909;ERATE=0.0005;THETA=0.0004;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 179350548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.932;LDAF=0.0633;AVGPOST=0.9859;RSQ=0.9097;ERATE=0.0005;THETA=0.0005;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 179350583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.3492;AVGPOST=0.9967;RSQ=0.9938;ERATE=0.0004;THETA=0.0031;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 179350604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.951;LDAF=0.1508;AVGPOST=0.9925;RSQ=0.9781;ERATE=0.0009;THETA=0.0004;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 179351247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0043;AVGPOST=0.9969;RSQ=0.7088;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179351292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3982;AVGPOST=0.9876;RSQ=0.9797;ERATE=0.0015;THETA=0.0003;AC=869;AN=2184 GT:DS:GL:BD 0.39789379 0
1 179351342 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.911;LDAF=0.1884;AVGPOST=0.9761;RSQ=0.9459;ERATE=0.0009;THETA=0.0002;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 179351347 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0039;AVGPOST=0.9962;RSQ=0.6266;ERATE=0.0007;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179351380 rs67026729 A AT 2496 PASS INDEL;BAVGPOST=0.910;BRSQ=0.638;LDAF=0.1500;AVGPOST=0.9555;RSQ=0.8775;ERATE=0.0007;THETA=0.0005;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 179351454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0285;AVGPOST=0.9979;RSQ=0.9705;ERATE=0.0005;THETA=0.0007;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179351512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0063;AVGPOST=0.9984;RSQ=0.8960;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179351606 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7677;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=1676;AN=2184 GT:DS:GL:BD 0.76739925 1
1 179351810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179351868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179351897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179352043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179352115 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179352295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179352337 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.5513;AVGPOST=0.9846;RSQ=0.9765;ERATE=0.0058;THETA=0.0003;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 179352337 . T TG 13046 PASS INDEL;BAVGPOST=0.938;BRSQ=0.341;LDAF=0.8950;AVGPOST=0.8536;RSQ=0.3759;ERATE=0.0229;THETA=0.0005;AC=2065;AN=2184 GT:DS:GL:BD 0.94551283 1
1 179352367 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1631;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0002;THETA=0.0003;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 179352374 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179352387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0054;AVGPOST=0.9987;RSQ=0.9065;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179352534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179352607 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179352640 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179352648 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9594;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179352675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179352705 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179352706 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179352731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0002;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179352736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1617;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0006;THETA=0.0004;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 179352787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179352925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1659;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 179353083 . C CTTT 132 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4785;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179353112 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179353157 . G GC 414 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8852;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179353333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9995;RSQ=0.9867;ERATE=0.0004;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179353439 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.967;LDAF=0.1324;AVGPOST=0.9972;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 179353440 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.967;LDAF=0.1324;AVGPOST=0.9972;RSQ=0.9908;ERATE=0.0002;THETA=0.0002;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 179353476 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0069;AVGPOST=0.9980;RSQ=0.8753;ERATE=0.0005;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179353508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0246;AVGPOST=0.9976;RSQ=0.9645;ERATE=0.0004;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179353555 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7701;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179353670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.8100;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179353787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179353971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8680;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179354272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179354273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8579;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179354274 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179354304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7701;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0003;AC=1681;AN=2184 GT:DS:GL:BD 0.76968867 1
1 179354516 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179354557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179354622 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179354733 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179354755 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1630;AVGPOST=0.9993;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 179354922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6024;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 179354984 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9465;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179355031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2071;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179355143 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1630;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 179355151 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0053;AVGPOST=0.9965;RSQ=0.7477;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179355159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3776;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=824;AN=2184 GT:DS:GL:BD 0.37728938 0
1 179355168 . G GATT 495 PASS INDEL;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0034;AVGPOST=0.9973;RSQ=0.6660;ERATE=0.0006;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179355248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8150;ERATE=0.0007;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179355250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.2064;AVGPOST=0.9915;RSQ=0.9811;ERATE=0.0010;THETA=0.0003;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 179355256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.956;LDAF=0.1590;AVGPOST=0.9924;RSQ=0.9785;ERATE=0.0006;THETA=0.0003;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 179355311 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3770;AVGPOST=0.9914;RSQ=0.9859;ERATE=0.0009;THETA=0.0005;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 179355325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.400;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6349;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179355397 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.453;LDAF=0.0197;AVGPOST=0.9815;RSQ=0.6386;ERATE=0.0013;THETA=0.0016;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179355419 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.766;LDAF=0.0098;AVGPOST=0.9933;RSQ=0.7534;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179355429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2073;AVGPOST=0.9972;RSQ=0.9931;ERATE=0.0007;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179355481 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2040;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0007;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 179355546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179355654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7478;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179355661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6569;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179355713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179355802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2084;AVGPOST=0.9975;RSQ=0.9946;ERATE=0.0005;THETA=0.0008;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 179355804 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179355948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179356036 . A AT 215 PASS INDEL;BAVGPOST=0.975;BRSQ=0.506;LDAF=0.0451;AVGPOST=0.9417;RSQ=0.4659;ERATE=0.0128;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179356100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2072;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0008;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179356224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8410;ERATE=0.0008;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179356225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0195;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0002;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179356252 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4192;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179356309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9777;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179356323 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2070;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0006;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179356352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179356378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2039;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0004;THETA=0.0004;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 179356460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1463;AVGPOST=0.9991;RSQ=0.9970;ERATE=0.0005;THETA=0.0013;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 179356485 . TGA T 62 PASS INDEL;BAVGPOST=0.990;BRSQ=0.559;LDAF=0.0211;AVGPOST=0.9770;RSQ=0.5602;ERATE=0.0085;THETA=0.0013;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179356552 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2072;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179356581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7696;AVGPOST=0.9977;RSQ=0.9952;ERATE=0.0004;THETA=0.0005;AC=1680;AN=2184 GT:DS:GL:BD 0.76923078 1
1 179356611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179356628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0061;AVGPOST=0.9983;RSQ=0.8883;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179356652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179356701 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2071;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179356779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179356791 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6933;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179356897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9797;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179357026 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2070;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0010;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179357056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6213;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179357242 . GCT G 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7376;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179357251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179357329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8040;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179357346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179357352 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0275;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0002;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179357469 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1461;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 179357471 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2065;AVGPOST=0.9981;RSQ=0.9958;ERATE=0.0003;THETA=0.0012;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179357486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0658;AVGPOST=0.9986;RSQ=0.9910;ERATE=0.0003;THETA=0.0024;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 179357489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179357533 . TG T 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0031;AVGPOST=0.9972;RSQ=0.6707;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179357670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2014;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 179357928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4571;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179357969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9983;RSQ=0.8283;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179358108 . A AT 811 PASS INDEL;BAVGPOST=0.929;BRSQ=0.594;LDAF=0.0893;AVGPOST=0.9448;RSQ=0.7783;ERATE=0.0005;THETA=0.0004;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 179358110 . TC T 8878 PASS INDEL;BAVGPOST=0.946;BRSQ=0.890;LDAF=0.1473;AVGPOST=0.9719;RSQ=0.9212;ERATE=0.0010;THETA=0.0005;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 179358111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.819;LDAF=0.2086;AVGPOST=0.8922;RSQ=0.7505;ERATE=0.0301;THETA=0.0003;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 179358142 . A ACT 11658 PASS INDEL;BAVGPOST=0.992;BRSQ=0.432;LDAF=0.9838;AVGPOST=0.9787;RSQ=0.5228;ERATE=0.0009;THETA=0.0005;AC=2159;AN=2184 GT:DS:GL:BD 0.98855311 1
1 179358143 rs72501158 C CTT 2835 PASS INDEL;BAVGPOST=0.490;BRSQ=0.143;LDAF=0.5138;AVGPOST=0.6197;RSQ=0.3274;ERATE=0.0498;THETA=0.0003;AC=1092;AN=2184 GT:DS:GL:BD 0.50000000 0
1 179358145 rs10682500 C CTT 50399 PASS INDEL;BAVGPOST=0.994;BRSQ=0.464;LDAF=0.9803;AVGPOST=0.9752;RSQ=0.4934;ERATE=0.0018;THETA=0.0007;AC=2157;AN=2184 GT:DS:GL:BD 0.98763734 1
1 179358159 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.928;LDAF=0.1989;AVGPOST=0.9769;RSQ=0.9479;ERATE=0.0021;THETA=0.0004;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 179358220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7534;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179358221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179358244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0039;AVGPOST=0.9968;RSQ=0.7199;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179358297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.807;LDAF=0.0094;AVGPOST=0.9938;RSQ=0.7442;ERATE=0.0008;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179358299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0178;AVGPOST=0.9984;RSQ=0.9576;ERATE=0.0004;THETA=0.0013;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179358448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5817;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179358449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2102;AVGPOST=0.9978;RSQ=0.9953;ERATE=0.0003;THETA=0.0033;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 179358489 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179358503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1464;AVGPOST=0.9988;RSQ=0.9964;ERATE=0.0003;THETA=0.0061;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 179358527 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5607;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179358535 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6422;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179358626 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2066;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179358646 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179358698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6781;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179358791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8366;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179358816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179358911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5611;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179359048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.7013;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179359049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179359050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7559;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179359070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179359073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2077;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0004;THETA=0.0005;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 179359120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2066;AVGPOST=0.9980;RSQ=0.9950;ERATE=0.0006;THETA=0.0004;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179359241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2036;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0004;THETA=0.0018;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 179359273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6388;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179359333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6639;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179359335 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0167;AVGPOST=0.9992;RSQ=0.9774;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179359355 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3945;AVGPOST=0.9970;RSQ=0.9947;ERATE=0.0004;THETA=0.0004;AC=862;AN=2184 GT:DS:GL:BD 0.39468864 0
1 179359362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2068;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0003;THETA=0.0007;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179359440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9988;RSQ=0.9719;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179359577 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0253;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0002;THETA=0.0009;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179359584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9983;RSQ=0.3954;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179359603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179359612 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.971;LDAF=0.2049;AVGPOST=0.9968;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 179359623 . GA G 361 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9296;ERATE=0.0002;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179359693 . ATGT A 420 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8489;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179359705 . T TA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7254;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179359739 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179359789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.2045;AVGPOST=0.9952;RSQ=0.9902;ERATE=0.0005;THETA=0.0002;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 179359810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.977;LDAF=0.2041;AVGPOST=0.9953;RSQ=0.9900;ERATE=0.0003;THETA=0.0009;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 179359822 rs5779023 C CTGGT 138871 PASS INDEL;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.8661;AVGPOST=0.9854;RSQ=0.9515;ERATE=0.0007;THETA=0.0013;AC=1898;AN=2184 GT:DS:GL:BD 0.86904764 1
1 179359886 . T TTC 5027 PASS INDEL;BAVGPOST=0.946;BRSQ=0.820;LDAF=0.1666;AVGPOST=0.9674;RSQ=0.9146;ERATE=0.0009;THETA=0.0003;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 179359927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5548;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179359995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0173;AVGPOST=0.9984;RSQ=0.9634;ERATE=0.0003;THETA=0.0039;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179360002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.950;LDAF=0.1832;AVGPOST=0.9800;RSQ=0.9577;ERATE=0.0003;THETA=0.0004;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 179360003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.930;LDAF=0.1229;AVGPOST=0.9804;RSQ=0.9424;ERATE=0.0004;THETA=0.0009;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 179360006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.951;LDAF=0.1829;AVGPOST=0.9791;RSQ=0.9562;ERATE=0.0004;THETA=0.0038;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 179360010 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0193;AVGPOST=0.9987;RSQ=0.9770;ERATE=0.0003;THETA=0.0009;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179360072 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0047;AVGPOST=0.9956;RSQ=0.6700;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179360091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.794;LDAF=0.0250;AVGPOST=0.9912;RSQ=0.8505;ERATE=0.0008;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 179360201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.974;LDAF=0.1650;AVGPOST=0.9972;RSQ=0.9918;ERATE=0.0003;THETA=0.0003;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 179360207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.948;LDAF=0.8716;AVGPOST=0.9928;RSQ=0.9738;ERATE=0.0008;THETA=0.0003;AC=1908;AN=2184 GT:DS:GL:BD 0.87362635 1
1 179360229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.2048;AVGPOST=0.9942;RSQ=0.9863;ERATE=0.0006;THETA=0.0026;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 179360248 rs71111983 T TC 14338 PASS INDEL;BAVGPOST=0.982;BRSQ=0.954;LDAF=0.2140;AVGPOST=0.9715;RSQ=0.9390;ERATE=0.0059;THETA=0.0003;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 179360391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0174;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0002;THETA=0.0016;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179360590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1622;AVGPOST=0.9978;RSQ=0.9937;ERATE=0.0003;THETA=0.0006;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 179360657 . TTTATTTATTTAC T 35582 PASS INDEL;BAVGPOST=0.978;BRSQ=0.955;LDAF=0.3682;AVGPOST=0.9926;RSQ=0.9868;ERATE=0.0009;THETA=0.0005;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 179360727 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8348;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179360773 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7182;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179360795 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7419;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179360819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.9007;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179360903 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5560;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179360953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1668;AVGPOST=0.9974;RSQ=0.9920;ERATE=0.0004;THETA=0.0006;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 179360998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0174;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0002;THETA=0.0010;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179361050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2075;AVGPOST=0.9983;RSQ=0.9955;ERATE=0.0005;THETA=0.0004;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179361163 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179361178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7672;AVGPOST=0.9981;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=1675;AN=2184 GT:DS:GL:BD 0.76694137 1
1 179361287 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2071;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179361299 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2071;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0003;THETA=0.0008;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179361335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9535;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179361458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8165;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179361476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.722;LDAF=0.0040;AVGPOST=0.9976;RSQ=0.7674;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179361480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179361502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1040;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0007;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 179361528 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2068;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0009;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179361544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8924;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179361674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8091;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179361684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7762;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179361726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8990;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179361743 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179361824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179361837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0064;AVGPOST=0.9985;RSQ=0.9228;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179361858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179361989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.820;LDAF=0.0122;AVGPOST=0.9969;RSQ=0.8994;ERATE=0.0007;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179362001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179362046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179362072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.972;LDAF=0.1389;AVGPOST=0.9965;RSQ=0.9897;ERATE=0.0006;THETA=0.0002;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 179362076 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7556;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179362162 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8114;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179362283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179362295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179362342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2063;AVGPOST=0.9980;RSQ=0.9951;ERATE=0.0004;THETA=0.0008;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 179362402 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1065;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 179362451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2070;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0005;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179362482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179362501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3786;AVGPOST=0.9961;RSQ=0.9932;ERATE=0.0005;THETA=0.0005;AC=824;AN=2184 GT:DS:GL:BD 0.37728938 0
1 179362586 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2070;AVGPOST=0.9987;RSQ=0.9966;ERATE=0.0005;THETA=0.0004;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179362615 rs55750883 AT A 5103 PASS INDEL;BAVGPOST=0.965;BRSQ=0.839;LDAF=0.1367;AVGPOST=0.9308;RSQ=0.7761;ERATE=0.0208;THETA=0.0004;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 179362670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179362693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179362697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2071;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0005;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179362767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2069;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0002;THETA=0.0005;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179362843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9406;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179362873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9571;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179362936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179363111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179363114 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179363143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0251;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179363193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179363275 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1065;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0004;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 179363311 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0251;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179363494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.962;LDAF=0.1597;AVGPOST=0.9946;RSQ=0.9826;ERATE=0.0011;THETA=0.0002;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 179363495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8005;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179363529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0045;AVGPOST=0.9968;RSQ=0.7291;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179363532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.970;LDAF=0.2023;AVGPOST=0.9898;RSQ=0.9773;ERATE=0.0016;THETA=0.0003;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 179363585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8379;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179363607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9263;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179363608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2044;AVGPOST=0.9986;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 179363635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.743;LDAF=0.0688;AVGPOST=0.9802;RSQ=0.8892;ERATE=0.0006;THETA=0.0003;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 179363649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.665;LDAF=0.0501;AVGPOST=0.9802;RSQ=0.8478;ERATE=0.0005;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 179363674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.940;LDAF=0.2053;AVGPOST=0.9944;RSQ=0.9861;ERATE=0.0006;THETA=0.0004;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 179363676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.790;LDAF=0.0097;AVGPOST=0.9968;RSQ=0.8700;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179363706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7788;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179363707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8392;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179363720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.914;LDAF=0.0263;AVGPOST=0.9973;RSQ=0.9643;ERATE=0.0002;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179363759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6802;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179363786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7829;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179363926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0386;AVGPOST=0.9987;RSQ=0.9848;ERATE=0.0003;THETA=0.0006;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 179363954 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8766;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0004;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 179363955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179363963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9712;ERATE=0.0002;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179363980 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0077;AVGPOST=0.9990;RSQ=0.9571;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179364059 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2047;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0002;THETA=0.0001;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 179364105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179364249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179364256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179364352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9744;ERATE=0.0005;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179364356 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179364368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179364370 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179364372 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1435;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 179364391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3780;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0002;THETA=0.0011;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 179364522 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179364848 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179365205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6584;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179365372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8069;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179365407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179365522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.739;LDAF=0.0108;AVGPOST=0.9928;RSQ=0.7508;ERATE=0.0006;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179365550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.948;LDAF=0.2006;AVGPOST=0.9911;RSQ=0.9797;ERATE=0.0006;THETA=0.0004;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 179365608 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0122;AVGPOST=0.9977;RSQ=0.9319;ERATE=0.0006;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179365628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9099;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179365644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.5980;AVGPOST=0.9893;RSQ=0.9822;ERATE=0.0015;THETA=0.0002;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 179365684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.955;LDAF=0.3477;AVGPOST=0.9906;RSQ=0.9829;ERATE=0.0006;THETA=0.0004;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 179365714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0024;AVGPOST=0.9961;RSQ=0.3048;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179365846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2072;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179365851 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6191;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179365855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4338;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179365859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9521;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179365938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179365939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179366044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9097;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179366054 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5360;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179366087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8031;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179366109 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7045;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179366232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8457;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179366317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9987;RSQ=0.9649;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179366364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2056;AVGPOST=0.9971;RSQ=0.9927;ERATE=0.0010;THETA=0.0002;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 179366459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9096;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179366596 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9406;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179366606 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1662;AVGPOST=0.9986;RSQ=0.9958;ERATE=0.0003;THETA=0.0001;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 179366635 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2040;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0006;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 179366758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6371;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179366870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179366897 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179366950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1610;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 179366955 rs74396784 A AT 17750 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1656;AVGPOST=0.9980;RSQ=0.9937;ERATE=0.0004;THETA=0.0009;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 179366959 . T TC 606 PASS INDEL;BAVGPOST=0.931;BRSQ=0.682;LDAF=0.1006;AVGPOST=0.9521;RSQ=0.8248;ERATE=0.0006;THETA=0.0007;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 179366974 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2073;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0002;THETA=0.0007;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179367051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179367052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179367301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2071;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0004;THETA=0.0005;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179367438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9472;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179367490 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5352;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179367498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8922;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179367636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2027;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0005;THETA=0.0003;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 179367650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2027;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0004;THETA=0.0010;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 179367679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6317;ERATE=0.0008;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179367728 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0254;AVGPOST=0.9993;RSQ=0.9886;ERATE=0.0003;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179367805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2079;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0005;THETA=0.0004;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179368132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179368150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2070;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0003;THETA=0.0030;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179368245 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7193;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179368268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8088;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179368289 . AT A 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6560;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179368310 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2085;AVGPOST=0.9973;RSQ=0.9951;ERATE=0.0003;THETA=0.0048;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 179368609 . TCTAGACATAA T 31647 PASS INDEL;BAVGPOST=0.975;BRSQ=0.915;LDAF=0.1583;AVGPOST=0.9876;RSQ=0.9668;ERATE=0.0006;THETA=0.0004;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 179368661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1074;AVGPOST=0.9986;RSQ=0.9936;ERATE=0.0004;THETA=0.0005;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 179368704 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179368784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.967;LDAF=0.1981;AVGPOST=0.9923;RSQ=0.9835;ERATE=0.0004;THETA=0.0005;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 179368813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.969;LDAF=0.1986;AVGPOST=0.9923;RSQ=0.9835;ERATE=0.0004;THETA=0.0006;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 179368824 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5195;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179368868 rs58920875 AAAAC A 114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7879;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179368893 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9450;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179368915 . AT A 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7692;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179368968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179369032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7544;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179369077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2064;AVGPOST=0.9986;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 179369244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9813;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179369246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4415;ERATE=0.0004;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179369300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9225;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179369345 . G GGT 94 PASS INDEL;BAVGPOST=0.998;BRSQ=0.516;LDAF=0.0039;AVGPOST=0.9983;RSQ=0.8125;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179369378 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0255;AVGPOST=0.9992;RSQ=0.9873;ERATE=0.0004;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179369472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5646;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179369473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2055;AVGPOST=0.9979;RSQ=0.9955;ERATE=0.0005;THETA=0.0029;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 179369480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9988;RSQ=0.9643;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179369496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179369603 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2065;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0004;THETA=0.0022;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 179369617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0660;AVGPOST=0.9977;RSQ=0.9850;ERATE=0.0003;THETA=0.0002;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 179369811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6711;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179369813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.869;LDAF=0.1566;AVGPOST=0.9687;RSQ=0.9253;ERATE=0.0006;THETA=0.0008;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 179369814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.867;LDAF=0.1593;AVGPOST=0.9683;RSQ=0.9262;ERATE=0.0004;THETA=0.0006;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 179369837 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.854;LDAF=0.1524;AVGPOST=0.9616;RSQ=0.9078;ERATE=0.0008;THETA=0.0005;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 179369866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.8144;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179369882 rs71111987 C CA 448 PASS INDEL;BAVGPOST=0.914;BRSQ=0.536;LDAF=0.1038;AVGPOST=0.9252;RSQ=0.7088;ERATE=0.0034;THETA=0.0003;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 179369965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.827;LDAF=0.8421;AVGPOST=0.9546;RSQ=0.8655;ERATE=0.0019;THETA=0.0007;AC=1873;AN=2184 GT:DS:GL:BD 0.85760075 1
1 179370062 . AG A 1675 PASS INDEL;BAVGPOST=0.839;BRSQ=0.419;LDAF=0.2220;AVGPOST=0.7910;RSQ=0.4558;ERATE=0.0586;THETA=0.0004;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 179370063 . G GA 284 PASS INDEL;BAVGPOST=0.970;BRSQ=0.469;LDAF=0.0420;AVGPOST=0.9497;RSQ=0.5094;ERATE=0.0057;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179370108 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2071;AVGPOST=0.9979;RSQ=0.9950;ERATE=0.0005;THETA=0.0013;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 179370121 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1658;AVGPOST=0.9947;RSQ=0.9842;ERATE=0.0006;THETA=0.0003;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 179370152 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5566;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179370183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.920;LDAF=0.0199;AVGPOST=0.9965;RSQ=0.9361;ERATE=0.0002;THETA=0.0065;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179370238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7617;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179370334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2073;AVGPOST=0.9960;RSQ=0.9903;ERATE=0.0007;THETA=0.0005;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 179370352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0025;AVGPOST=0.9970;RSQ=0.5405;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179370353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1050;AVGPOST=0.9941;RSQ=0.9771;ERATE=0.0005;THETA=0.0020;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 179370450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.2091;AVGPOST=0.9979;RSQ=0.9951;ERATE=0.0004;THETA=0.0007;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179370473 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2101;AVGPOST=0.9967;RSQ=0.9923;ERATE=0.0006;THETA=0.0005;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 179370499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2099;AVGPOST=0.9968;RSQ=0.9927;ERATE=0.0006;THETA=0.0003;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 179370559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0059;AVGPOST=0.9986;RSQ=0.8945;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179370570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6819;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179370578 . TC T 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0031;AVGPOST=0.9962;RSQ=0.5006;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179370652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.9942;AVGPOST=0.9988;RSQ=0.9082;ERATE=0.0003;THETA=0.0005;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 179370686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7272;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179370731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7140;ERATE=0.0003;THETA=0.0063;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179370825 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8590;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179370836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0101;AVGPOST=0.9995;RSQ=0.9797;ERATE=0.0002;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179370904 . CTCTT C 671 PASS INDEL;BAVGPOST=0.997;BRSQ=0.758;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9024;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179370916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0270;AVGPOST=0.9987;RSQ=0.9787;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 179370917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0250;AVGPOST=0.9989;RSQ=0.9808;ERATE=0.0004;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179370922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.976;LDAF=0.3574;AVGPOST=0.9844;RSQ=0.9743;ERATE=0.0022;THETA=0.0009;AC=781;AN=2184 GT:DS:GL:BD 0.35760072 0
1 179370973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.961;LDAF=0.2245;AVGPOST=0.9805;RSQ=0.9609;ERATE=0.0033;THETA=0.0007;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 179371015 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0118;AVGPOST=0.9988;RSQ=0.9557;ERATE=0.0004;THETA=0.0032;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179371036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5756;ERATE=0.0004;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179371057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4070;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179371150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0188;AVGPOST=0.9993;RSQ=0.9828;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179371187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5461;ERATE=0.0003;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179371201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0264;AVGPOST=0.9975;RSQ=0.9646;ERATE=0.0005;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179371286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.677;LDAF=0.0073;AVGPOST=0.9941;RSQ=0.6683;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179371300 . A AAC 5549 PASS INDEL;BAVGPOST=0.973;BRSQ=0.898;LDAF=0.1509;AVGPOST=0.9784;RSQ=0.9389;ERATE=0.0006;THETA=0.0007;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 179371301 rs71111989 A AC 7162 PASS INDEL;BAVGPOST=0.973;BRSQ=0.898;LDAF=0.1514;AVGPOST=0.9770;RSQ=0.9345;ERATE=0.0011;THETA=0.0006;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 179371366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9318;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179371395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5995;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=1309;AN=2184 GT:DS:GL:BD 0.59935898 1
1 179371455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179371501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3517;AVGPOST=0.9971;RSQ=0.9951;ERATE=0.0004;THETA=0.0003;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 179371530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0160;AVGPOST=0.9999;RSQ=0.9972;ERATE=0.0002;THETA=0.0017;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179371669 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179371781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2090;AVGPOST=0.9981;RSQ=0.9958;ERATE=0.0005;THETA=0.0026;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179371821 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6447;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179371834 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5741;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179371892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179371973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5988;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0006;THETA=0.0003;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 179372078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0068;AVGPOST=0.9989;RSQ=0.9275;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179372263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179372282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3496;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 179372286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1946;AVGPOST=0.9974;RSQ=0.9945;ERATE=0.0003;THETA=0.0002;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 179372348 . TAAGG T 684 PASS INDEL;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0053;AVGPOST=0.9982;RSQ=0.8567;ERATE=0.0005;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179372375 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179372473 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179372539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3747;AVGPOST=0.9982;RSQ=0.9973;ERATE=0.0004;THETA=0.0001;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 179372545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2184;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0003;THETA=0.0010;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 179372677 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179372684 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179372852 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8663;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179372869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.1023;AVGPOST=0.9969;RSQ=0.9857;ERATE=0.0008;THETA=0.0041;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 179373089 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.5962;AVGPOST=0.9918;RSQ=0.9879;ERATE=0.0008;THETA=0.0005;AC=1302;AN=2184 GT:DS:GL:BD 0.59615386 1
1 179373093 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179373099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.5955;AVGPOST=0.9943;RSQ=0.9913;ERATE=0.0005;THETA=0.0003;AC=1302;AN=2184 GT:DS:GL:BD 0.59615386 1
1 179373201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1672;AVGPOST=0.9979;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 179373284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1472;AVGPOST=0.9964;RSQ=0.9893;ERATE=0.0005;THETA=0.0005;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179373287 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2054;AVGPOST=0.9974;RSQ=0.9941;ERATE=0.0002;THETA=0.0004;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 179373342 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9083;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179373382 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0279;AVGPOST=0.9990;RSQ=0.9841;ERATE=0.0004;THETA=0.0038;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179373479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.739;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7025;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179373498 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.934;LDAF=0.1914;AVGPOST=0.9824;RSQ=0.9610;ERATE=0.0022;THETA=0.0004;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 179373541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7278;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179373555 . CTG C 23341 PASS INDEL;BAVGPOST=0.932;BRSQ=0.878;LDAF=0.3669;AVGPOST=0.9532;RSQ=0.9314;ERATE=0.0011;THETA=0.0005;AC=821;AN=2184 GT:DS:GL:BD 0.37591577 0
1 179373558 rs61554812 TG T 595 PASS INDEL;BAVGPOST=0.894;BRSQ=0.795;LDAF=0.3124;AVGPOST=0.9132;RSQ=0.8673;ERATE=0.0008;THETA=0.0004;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 179373559 rs61554812 GTT G 1765 PASS INDEL;BAVGPOST=0.908;BRSQ=0.820;LDAF=0.3073;AVGPOST=0.9194;RSQ=0.8738;ERATE=0.0008;THETA=0.0004;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 179373626 rs56804815 GA G 28940 PASS INDEL;BAVGPOST=0.951;BRSQ=0.908;LDAF=0.3841;AVGPOST=0.9463;RSQ=0.9163;ERATE=0.0080;THETA=0.0008;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 179373628 . AT A 1122 PASS INDEL;BAVGPOST=0.880;BRSQ=0.782;LDAF=0.3267;AVGPOST=0.9134;RSQ=0.8678;ERATE=0.0018;THETA=0.0008;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 179373648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0066;AVGPOST=0.9987;RSQ=0.9307;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179373655 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2066;AVGPOST=0.9960;RSQ=0.9917;ERATE=0.0004;THETA=0.0009;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 179373680 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1020;AVGPOST=0.9985;RSQ=0.9933;ERATE=0.0003;THETA=0.0051;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 179373771 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2076;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0002;THETA=0.0005;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 179373806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179374011 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9317;ERATE=0.0002;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179374051 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.923;LDAF=0.1503;AVGPOST=0.9823;RSQ=0.9526;ERATE=0.0004;THETA=0.0006;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 179374052 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.952;LDAF=0.5472;AVGPOST=0.9622;RSQ=0.9469;ERATE=0.0063;THETA=0.0006;AC=1199;AN=2184 GT:DS:GL:BD 0.54899269 1
1 179374115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7054;ERATE=0.0005;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179374141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7702;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179374195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.915;LDAF=0.0197;AVGPOST=0.9954;RSQ=0.9112;ERATE=0.0005;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179374215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.3734;AVGPOST=0.9945;RSQ=0.9906;ERATE=0.0007;THETA=0.0002;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 179374368 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7441;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179374404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.584;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4359;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179374411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1018;AVGPOST=0.9989;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 179374475 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179374491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179374527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8580;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179374585 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5014;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179374625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7263;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179374634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8739;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179374759 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.925;LDAF=0.0354;AVGPOST=0.9956;RSQ=0.9461;ERATE=0.0004;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 179374845 . TTTTG T 36264 PASS INDEL;BAVGPOST=0.987;BRSQ=0.976;LDAF=0.3750;AVGPOST=0.9942;RSQ=0.9906;ERATE=0.0007;THETA=0.0013;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 179374886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179374886 . GTC G 374 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9977;RSQ=0.8086;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179374888 . CTCT C 76 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8321;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179374980 rs35978241 G GT 23590 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2092;AVGPOST=0.9965;RSQ=0.9922;ERATE=0.0004;THETA=0.0006;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 179375042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8483;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179375166 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.7196;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179375248 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179375268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6174;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179375294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.979;LDAF=0.1420;AVGPOST=0.9954;RSQ=0.9863;ERATE=0.0005;THETA=0.0002;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 179375296 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.525;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6810;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179375311 rs60424348 CTTG C 34463 PASS INDEL;BAVGPOST=0.993;BRSQ=0.980;LDAF=0.2059;AVGPOST=0.9925;RSQ=0.9831;ERATE=0.0014;THETA=0.0004;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 179375320 . AAT A 113 PASS INDEL;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0054;AVGPOST=0.9958;RSQ=0.7113;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179375324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9701;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179375468 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9744;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179375469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0103;AVGPOST=0.9979;RSQ=0.9193;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179375471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179375521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5665;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179375537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0092;AVGPOST=0.9989;RSQ=0.9579;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179375660 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1627;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0016;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 179375667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3912;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 179375706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179375852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2069;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 179375874 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9256;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179375883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179375950 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179375979 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2083;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 179376039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6496;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179376119 . T TG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179376161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2092;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179376178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7717;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=1684;AN=2184 GT:DS:GL:BD 0.77106225 1
1 179376224 . A AT 208 PASS INDEL;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0033;AVGPOST=0.9982;RSQ=0.7761;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179376232 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8726;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=1906;AN=2184 GT:DS:GL:BD 0.87271065 1
1 179376357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0255;AVGPOST=0.9985;RSQ=0.9770;ERATE=0.0003;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179376365 . C CT 524 PASS INDEL;BAVGPOST=0.949;BRSQ=0.514;LDAF=0.0955;AVGPOST=0.8901;RSQ=0.4806;ERATE=0.0277;THETA=0.0004;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 179376369 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0059;AVGPOST=0.9975;RSQ=0.8162;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179376448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179376508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0021;AVGPOST=0.9966;RSQ=0.4081;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179376524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2089;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179376587 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179376654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2090;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0005;THETA=0.0005;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179376896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1681;AVGPOST=0.9988;RSQ=0.9962;ERATE=0.0004;THETA=0.0028;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 179377003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0066;AVGPOST=0.9941;RSQ=0.6790;ERATE=0.0013;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179377040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179377208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4301;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179377236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2088;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0003;THETA=0.0007;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179377320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5897;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179377324 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179377398 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4551;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179377544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2124;AVGPOST=0.9972;RSQ=0.9932;ERATE=0.0004;THETA=0.0003;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 179377581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0096;AVGPOST=0.9982;RSQ=0.9356;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179377587 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179377669 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9995;RSQ=0.9821;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179377744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.567;LDAF=0.0074;AVGPOST=0.9902;RSQ=0.5241;ERATE=0.0015;THETA=0.0019;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179377764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0276;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0003;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179377767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8853;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179377814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9228;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179377852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179377880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9137;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179377967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5336;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179377999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.730;LDAF=0.0048;AVGPOST=0.9975;RSQ=0.8221;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179378002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9995;RSQ=0.9876;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179378016 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7507;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179378018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8995;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179378187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179378259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7794;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179378451 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2100;AVGPOST=0.9973;RSQ=0.9944;ERATE=0.0004;THETA=0.0005;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179378485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179378498 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0042;AVGPOST=0.9975;RSQ=0.7758;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179378505 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.956;LDAF=0.5796;AVGPOST=0.9711;RSQ=0.9557;ERATE=0.0048;THETA=0.0017;AC=1274;AN=2184 GT:DS:GL:BD 0.58333331 1
1 179378515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0419;AVGPOST=0.9979;RSQ=0.9799;ERATE=0.0003;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 179378556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9368;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179378617 . A AT 1165 PASS INDEL;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0150;AVGPOST=0.9989;RSQ=0.9705;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179378650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8897;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179378743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2090;AVGPOST=0.9982;RSQ=0.9953;ERATE=0.0006;THETA=0.0003;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179378752 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0167;AVGPOST=0.9995;RSQ=0.9850;ERATE=0.0004;THETA=0.0029;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179378787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.888;LDAF=0.1336;AVGPOST=0.9574;RSQ=0.8550;ERATE=0.0099;THETA=0.0002;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 179378791 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.947;LDAF=0.2024;AVGPOST=0.9876;RSQ=0.9704;ERATE=0.0013;THETA=0.0007;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 179378925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.977;LDAF=0.2065;AVGPOST=0.9966;RSQ=0.9919;ERATE=0.0006;THETA=0.0003;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 179378963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7999;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179378964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5995;AVGPOST=0.9974;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 179379018 . TA T 486 PASS INDEL;BAVGPOST=0.958;BRSQ=0.624;LDAF=0.0704;AVGPOST=0.9627;RSQ=0.8023;ERATE=0.0005;THETA=0.0006;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 179379019 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1030;AVGPOST=0.9968;RSQ=0.9855;ERATE=0.0008;THETA=0.0006;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 179379072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179379115 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179379131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179379133 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6051;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179379197 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1016;AVGPOST=0.9984;RSQ=0.9923;ERATE=0.0003;THETA=0.0013;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 179379405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1016;AVGPOST=0.9986;RSQ=0.9934;ERATE=0.0004;THETA=0.0003;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 179379458 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0035;AVGPOST=0.9963;RSQ=0.5646;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179379494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4862;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179379513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.8695;AVGPOST=0.9926;RSQ=0.9742;ERATE=0.0008;THETA=0.0012;AC=1903;AN=2184 GT:DS:GL:BD 0.87133700 1
1 179379538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8796;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179379612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4802;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179379615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0280;AVGPOST=0.9986;RSQ=0.9786;ERATE=0.0003;THETA=0.0007;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179379713 . AG A 90 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5922;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179379792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5370;ERATE=0.0005;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179380001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1697;AVGPOST=0.9963;RSQ=0.9899;ERATE=0.0006;THETA=0.0004;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 179380047 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0002;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179380085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9304;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179380175 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0012;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179380214 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8355;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179380414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0008;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179380472 rs11298763 GT G 46446 PASS INDEL;BAVGPOST=0.986;BRSQ=0.975;LDAF=0.5914;AVGPOST=0.9792;RSQ=0.9672;ERATE=0.0055;THETA=0.0006;AC=1294;AN=2184 GT:DS:GL:BD 0.59249085 1
1 179380480 . TG T 293 PASS INDEL;BAVGPOST=0.901;BRSQ=0.328;LDAF=0.0955;AVGPOST=0.8836;RSQ=0.4794;ERATE=0.0147;THETA=0.0002;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 179380508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179380519 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1659;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0004;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 179380640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3746;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 179380852 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179380872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179381168 . TAG T 1112 PASS INDEL;BAVGPOST=0.997;BRSQ=0.874;LDAF=0.0132;AVGPOST=0.9952;RSQ=0.8655;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179381199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.1970;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179381413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6007;AVGPOST=0.9972;RSQ=0.9954;ERATE=0.0006;THETA=0.0005;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 179381445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179381525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4948;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179381574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0150;AVGPOST=0.9990;RSQ=0.9726;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179381593 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179381668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179381699 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.6003;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0006;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 179381715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179381826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179382042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2104;AVGPOST=0.9976;RSQ=0.9941;ERATE=0.0006;THETA=0.0005;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 179382168 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3751;AVGPOST=0.9972;RSQ=0.9952;ERATE=0.0006;THETA=0.0016;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 179382324 rs58832911 ACAAT A 43629 PASS INDEL;BAVGPOST=0.974;BRSQ=0.949;LDAF=0.3708;AVGPOST=0.9942;RSQ=0.9907;ERATE=0.0003;THETA=0.0002;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 179382371 . TATTA T 246 PASS INDEL;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0038;AVGPOST=0.9959;RSQ=0.5613;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179382410 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.750;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8954;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179382426 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2096;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 179382430 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179382550 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5420;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179382552 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1016;AVGPOST=0.9989;RSQ=0.9948;ERATE=0.0004;THETA=0.0009;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 179382622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3745;AVGPOST=0.9974;RSQ=0.9952;ERATE=0.0007;THETA=0.0004;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 179382684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6002;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0005;THETA=0.0005;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 179382882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179382959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3752;AVGPOST=0.9942;RSQ=0.9900;ERATE=0.0015;THETA=0.0005;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 179383006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0156;AVGPOST=0.9995;RSQ=0.9864;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179383029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0307;AVGPOST=0.9986;RSQ=0.9822;ERATE=0.0003;THETA=0.0007;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 179383030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3905;AVGPOST=0.9944;RSQ=0.9906;ERATE=0.0010;THETA=0.0004;AC=852;AN=2184 GT:DS:GL:BD 0.39010990 0
1 179383059 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.536;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.6909;ERATE=0.0007;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179383128 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5984;AVGPOST=0.9944;RSQ=0.9907;ERATE=0.0012;THETA=0.0028;AC=1308;AN=2184 GT:DS:GL:BD 0.59890109 1
1 179383144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6494;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179383248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.8728;AVGPOST=0.9980;RSQ=0.9924;ERATE=0.0004;THETA=0.0003;AC=1907;AN=2184 GT:DS:GL:BD 0.87316847 1
1 179383285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0281;AVGPOST=0.9993;RSQ=0.9882;ERATE=0.0003;THETA=0.0019;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179383329 . TAC T 19792 PASS INDEL;BAVGPOST=0.972;BRSQ=0.948;LDAF=0.3881;AVGPOST=0.9939;RSQ=0.9893;ERATE=0.0005;THETA=0.0004;AC=851;AN=2184 GT:DS:GL:BD 0.38965201 0
1 179383330 rs11290916 AC A 24447 PASS INDEL;BAVGPOST=0.971;BRSQ=0.947;LDAF=0.3901;AVGPOST=0.9915;RSQ=0.9854;ERATE=0.0006;THETA=0.0076;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 179383340 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.835;LDAF=0.8158;AVGPOST=0.9167;RSQ=0.7832;ERATE=0.0178;THETA=0.0028;AC=1830;AN=2184 GT:DS:GL:BD 0.83791208 1
1 179383342 . C CA 10 PASS INDEL;BAVGPOST=0.891;BRSQ=0.028;LDAF=0.0953;AVGPOST=0.8424;RSQ=0.2708;ERATE=0.0102;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 179383570 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.516;LDAF=0.0074;AVGPOST=0.9964;RSQ=0.8200;ERATE=0.0007;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179383628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0250;AVGPOST=0.9968;RSQ=0.9481;ERATE=0.0006;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179383645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0039;AVGPOST=0.9977;RSQ=0.7416;ERATE=0.0006;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179383661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.5736;ERATE=0.0006;THETA=0.0049;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179383781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.901;LDAF=0.3750;AVGPOST=0.9774;RSQ=0.9622;ERATE=0.0012;THETA=0.0009;AC=830;AN=2184 GT:DS:GL:BD 0.38003662 0
1 179383803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0030;AVGPOST=0.9974;RSQ=0.6502;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179383811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.843;LDAF=0.1899;AVGPOST=0.9690;RSQ=0.9292;ERATE=0.0011;THETA=0.0005;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 179383812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.904;BRSQ=0.855;LDAF=0.5527;AVGPOST=0.9392;RSQ=0.9100;ERATE=0.0043;THETA=0.0005;AC=1230;AN=2184 GT:DS:GL:BD 0.56318682 1
1 179383839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.919;LDAF=0.2049;AVGPOST=0.9876;RSQ=0.9719;ERATE=0.0006;THETA=0.0008;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 179383849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.703;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8123;ERATE=0.0006;THETA=0.0034;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179384068 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7930;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179384102 . TAG T 13258 PASS INDEL;BAVGPOST=0.938;BRSQ=0.884;LDAF=0.5512;AVGPOST=0.8918;RSQ=0.8345;ERATE=0.0229;THETA=0.0003;AC=1237;AN=2184 GT:DS:GL:BD 0.56639194 1
1 179384104 rs72259847 GAA G 60046 PASS INDEL;BAVGPOST=0.978;BRSQ=0.961;LDAF=0.6008;AVGPOST=0.9884;RSQ=0.9811;ERATE=0.0008;THETA=0.0008;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 179384163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179384194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5758;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179384275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.981;LDAF=0.5960;AVGPOST=0.9916;RSQ=0.9869;ERATE=0.0004;THETA=0.0007;AC=1305;AN=2184 GT:DS:GL:BD 0.59752744 1
1 179384331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8882;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179384351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.970;LDAF=0.5877;AVGPOST=0.9830;RSQ=0.9747;ERATE=0.0006;THETA=0.0004;AC=1290;AN=2184 GT:DS:GL:BD 0.59065932 1
1 179384399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0107;AVGPOST=0.9964;RSQ=0.8568;ERATE=0.0005;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179384401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.859;LDAF=0.0102;AVGPOST=0.9949;RSQ=0.8108;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179384478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0150;AVGPOST=0.9991;RSQ=0.9702;ERATE=0.0005;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179384511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7796;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179384530 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7702;AVGPOST=0.9965;RSQ=0.9918;ERATE=0.0007;THETA=0.0002;AC=1684;AN=2184 GT:DS:GL:BD 0.77106225 1
1 179384617 . CA C 206 PASS INDEL;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0070;AVGPOST=0.9994;RSQ=0.9566;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179384663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5234;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179384891 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0030;AVGPOST=0.9966;RSQ=0.5503;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179384901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3922;AVGPOST=0.9879;RSQ=0.9794;ERATE=0.0014;THETA=0.0003;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 179384914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.380;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5024;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179384964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4702;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179385002 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9295;ERATE=0.0002;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179385109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179385187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5992;AVGPOST=0.9960;RSQ=0.9938;ERATE=0.0007;THETA=0.0007;AC=1308;AN=2184 GT:DS:GL:BD 0.59890109 1
1 179385278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179385378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179385492 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7714;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0002;THETA=0.0009;AC=1684;AN=2184 GT:DS:GL:BD 0.77106225 1
1 179385529 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2087;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0003;THETA=0.0007;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179385799 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.3733;ERATE=0.0002;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179385847 . C CT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6642;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179385887 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8355;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179385915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0252;AVGPOST=0.9996;RSQ=0.9938;ERATE=0.0002;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179385966 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8123;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179386001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.6050;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179386018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5998;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0005;THETA=0.0003;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 179386058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5678;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179386108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7721;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179386120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179386135 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9614;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179386160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9800;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179386253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2087;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0004;THETA=0.0006;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179386323 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7736;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179386411 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179386464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8836;ERATE=0.0003;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179386564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0096;AVGPOST=0.9968;RSQ=0.8614;ERATE=0.0005;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179386625 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179386916 . T TG 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0027;AVGPOST=0.9960;RSQ=0.4512;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179386932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5590;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179386956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0169;AVGPOST=0.9979;RSQ=0.9549;ERATE=0.0002;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179387050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2092;AVGPOST=0.9937;RSQ=0.9859;ERATE=0.0008;THETA=0.0008;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 179387095 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0158;AVGPOST=0.9989;RSQ=0.9695;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179387109 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.919;LDAF=0.5750;AVGPOST=0.9462;RSQ=0.9143;ERATE=0.0098;THETA=0.0004;AC=1270;AN=2184 GT:DS:GL:BD 0.58150184 1
1 179387140 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.876;LDAF=0.3734;AVGPOST=0.9470;RSQ=0.9104;ERATE=0.0063;THETA=0.0002;AC=831;AN=2184 GT:DS:GL:BD 0.38049451 0
1 179387796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.505;BRSQ=0.063;LDAF=0.7155;AVGPOST=0.6485;RSQ=0.2696;ERATE=0.0253;THETA=0.0038;AC=1754;AN=2184 GT:DS:GL:BD 0.80311358 1
1 179387804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.755;BRSQ=0.041;LDAF=0.1717;AVGPOST=0.7434;RSQ=0.2662;ERATE=0.0147;THETA=0.0007;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 179387811 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.741;BRSQ=0.058;LDAF=0.2005;AVGPOST=0.7141;RSQ=0.2637;ERATE=0.0200;THETA=0.0005;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 179387824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.704;BRSQ=0.166;LDAF=0.2397;AVGPOST=0.7537;RSQ=0.4651;ERATE=0.0058;THETA=0.0009;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 179387841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.826;BRSQ=0.492;LDAF=0.2690;AVGPOST=0.7941;RSQ=0.5868;ERATE=0.0114;THETA=0.0004;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 179387871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.840;BRSQ=0.660;LDAF=0.4112;AVGPOST=0.8005;RSQ=0.6659;ERATE=0.0111;THETA=0.0015;AC=890;AN=2184 GT:DS:GL:BD 0.40750915 0
1 179387999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.817;LDAF=0.0110;AVGPOST=0.9931;RSQ=0.7509;ERATE=0.0007;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179388081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.537;LDAF=0.0264;AVGPOST=0.9758;RSQ=0.6156;ERATE=0.0015;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179388084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.354;LDAF=0.0079;AVGPOST=0.9905;RSQ=0.5123;ERATE=0.0010;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179388097 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.760;LDAF=0.1703;AVGPOST=0.9789;RSQ=0.9441;ERATE=0.0009;THETA=0.0004;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 179388117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.859;BRSQ=0.721;LDAF=0.3620;AVGPOST=0.9225;RSQ=0.8719;ERATE=0.0029;THETA=0.0006;AC=793;AN=2184 GT:DS:GL:BD 0.36309522 0
1 179388131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.871;BRSQ=0.739;LDAF=0.3568;AVGPOST=0.8891;RSQ=0.8143;ERATE=0.0057;THETA=0.0004;AC=797;AN=2184 GT:DS:GL:BD 0.36492673 0
1 179388149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.878;LDAF=0.2033;AVGPOST=0.9447;RSQ=0.8778;ERATE=0.0020;THETA=0.0018;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 179388170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.914;BRSQ=0.811;LDAF=0.3662;AVGPOST=0.8584;RSQ=0.7584;ERATE=0.0154;THETA=0.0006;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 179388199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0041;AVGPOST=0.9948;RSQ=0.4690;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179388504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.753;LDAF=0.2378;AVGPOST=0.9270;RSQ=0.8433;ERATE=0.0031;THETA=0.0006;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 179388513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.757;BRSQ=0.421;LDAF=0.7294;AVGPOST=0.7561;RSQ=0.5133;ERATE=0.0173;THETA=0.0004;AC=1727;AN=2184 GT:DS:GL:BD 0.79075092 1
1 179388777 . GGA G 166 PASS INDEL;BAVGPOST=0.807;BRSQ=0.137;LDAF=0.1341;AVGPOST=0.8461;RSQ=0.5149;ERATE=0.0023;THETA=0.0011;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 179388779 . AGAGGGG A 5352 PASS INDEL;BAVGPOST=0.858;BRSQ=0.664;LDAF=0.3215;AVGPOST=0.7979;RSQ=0.6508;ERATE=0.0096;THETA=0.0002;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 179388780 . GA G 1561 PASS INDEL;BAVGPOST=0.735;BRSQ=0.430;LDAF=0.2232;AVGPOST=0.7484;RSQ=0.4216;ERATE=0.0231;THETA=0.0003;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 179388793 . AGG A 68 PASS INDEL;BAVGPOST=0.907;BRSQ=0.224;LDAF=0.1236;AVGPOST=0.8450;RSQ=0.4602;ERATE=0.0058;THETA=0.0005;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 179388807 . AGAGAGG A 757 PASS INDEL;BAVGPOST=0.993;BRSQ=0.785;LDAF=0.0181;AVGPOST=0.9961;RSQ=0.9255;ERATE=0.0004;THETA=0.0038;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179389115 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1020;AVGPOST=0.9985;RSQ=0.9926;ERATE=0.0003;THETA=0.0006;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 179389157 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0091;AVGPOST=0.9993;RSQ=0.9727;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179389161 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.918;LDAF=0.0332;AVGPOST=0.9957;RSQ=0.9471;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 179389197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4900;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179389242 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0151;AVGPOST=0.9996;RSQ=0.9876;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179389254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6412;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179389305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7144;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179389339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179389439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3911;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0003;THETA=0.0039;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 179389558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7572;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179389575 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5181;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179389611 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.5999;AVGPOST=0.9973;RSQ=0.9950;ERATE=0.0009;THETA=0.0005;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 179389907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.578;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5908;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179389946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7742;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179389947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0048;AVGPOST=0.9951;RSQ=0.6444;ERATE=0.0005;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179390046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179390104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179390148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5997;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=1309;AN=2184 GT:DS:GL:BD 0.59935898 1
1 179390192 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179390207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.746;LDAF=0.0320;AVGPOST=0.9783;RSQ=0.7452;ERATE=0.0027;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179390215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.660;LDAF=0.0190;AVGPOST=0.9909;RSQ=0.8176;ERATE=0.0005;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179390259 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179390358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.566;LDAF=0.0059;AVGPOST=0.9957;RSQ=0.7099;ERATE=0.0009;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179390371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9848;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179390460 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1654;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 179390554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9965;RSQ=0.6617;ERATE=0.0004;THETA=0.0051;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179390580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5998;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0005;THETA=0.0004;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 179390674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4026;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179390777 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0063;AVGPOST=0.9988;RSQ=0.9123;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179390817 rs111703694 CTTTATCT C 3014 PASS INDEL;BAVGPOST=0.997;BRSQ=0.907;LDAF=0.0170;AVGPOST=0.9974;RSQ=0.9478;ERATE=0.0003;THETA=0.0011;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179390831 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.850;LDAF=0.0293;AVGPOST=0.9914;RSQ=0.8864;ERATE=0.0004;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179390898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0316;AVGPOST=0.9989;RSQ=0.9862;ERATE=0.0003;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 179391042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3556;AVGPOST=0.9845;RSQ=0.9729;ERATE=0.0013;THETA=0.0003;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 179391161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.878;LDAF=0.0169;AVGPOST=0.9963;RSQ=0.9015;ERATE=0.0007;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179391210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179391305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179391341 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2095;AVGPOST=0.9984;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179391352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5229;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179391729 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8728;AVGPOST=0.9977;RSQ=0.9928;ERATE=0.0006;THETA=0.0008;AC=1907;AN=2184 GT:DS:GL:BD 0.87316847 1
1 179391795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179391871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7684;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=1677;AN=2184 GT:DS:GL:BD 0.76785713 1
1 179391910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2084;AVGPOST=0.9974;RSQ=0.9943;ERATE=0.0005;THETA=0.0005;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 179391951 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0284;AVGPOST=0.9980;RSQ=0.9678;ERATE=0.0006;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179391968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0161;AVGPOST=0.9983;RSQ=0.9520;ERATE=0.0005;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179391984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0039;AVGPOST=0.9957;RSQ=0.5501;ERATE=0.0009;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179391990 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.969;LDAF=0.5977;AVGPOST=0.9956;RSQ=0.9919;ERATE=0.0007;THETA=0.0006;AC=1308;AN=2184 GT:DS:GL:BD 0.59890109 1
1 179392000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.965;LDAF=0.2073;AVGPOST=0.9973;RSQ=0.9933;ERATE=0.0003;THETA=0.0002;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 179392121 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1663;AVGPOST=0.9973;RSQ=0.9918;ERATE=0.0005;THETA=0.0003;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 179392133 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0034;AVGPOST=0.9950;RSQ=0.4227;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179392256 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6684;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179392317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0107;AVGPOST=0.9990;RSQ=0.9622;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179392352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4665;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179392377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6343;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179392491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6861;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179392511 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7711;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=1684;AN=2184 GT:DS:GL:BD 0.77106225 1
1 179392580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6846;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179392674 rs113216157 GT G 1566 PASS INDEL;BAVGPOST=0.996;BRSQ=0.879;LDAF=0.0165;AVGPOST=0.9996;RSQ=0.9898;ERATE=0.0002;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179392677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5979;AVGPOST=0.9942;RSQ=0.9904;ERATE=0.0016;THETA=0.0002;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 179392724 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0141;AVGPOST=0.9979;RSQ=0.9529;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179392781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.519;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.4999;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179392823 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7898;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179392833 rs60134062 AAAG A 19451 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1656;AVGPOST=0.9955;RSQ=0.9880;ERATE=0.0006;THETA=0.0004;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 179392863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.825;LDAF=0.0095;AVGPOST=0.9968;RSQ=0.8532;ERATE=0.0006;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179392876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7548;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179392908 . AT A 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4663;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179392930 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2089;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179393165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0134;AVGPOST=0.9994;RSQ=0.9855;ERATE=0.0002;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179393185 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179393190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7459;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179393215 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179393331 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5400;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179393393 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1015;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0002;THETA=0.0006;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 179393716 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0025;AVGPOST=0.9965;RSQ=0.4426;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179393803 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2089;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179393876 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6966;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179393930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2084;AVGPOST=0.9968;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 179393952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0080;AVGPOST=0.9969;RSQ=0.8355;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179393986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2091;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179394049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179394212 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2089;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0019;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179394325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0274;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0002;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179394362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179394372 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3745;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0004;THETA=0.0003;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 179394524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0056;AVGPOST=0.9990;RSQ=0.9407;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179394691 . TGG T 117 PASS INDEL;BAVGPOST=0.998;BRSQ=0.624;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6996;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179394786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3910;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0006;THETA=0.0039;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 179394945 rs36033797 GT G 5865 PASS INDEL;BAVGPOST=0.964;BRSQ=0.860;LDAF=0.1587;AVGPOST=0.9739;RSQ=0.9286;ERATE=0.0005;THETA=0.0003;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 179394947 rs36033797 GT G 5501 PASS INDEL;BAVGPOST=0.963;BRSQ=0.857;LDAF=0.1621;AVGPOST=0.9685;RSQ=0.9134;ERATE=0.0012;THETA=0.0004;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 179394969 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0254;AVGPOST=0.9991;RSQ=0.9861;ERATE=0.0004;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179395059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.723;LDAF=0.1038;AVGPOST=0.9348;RSQ=0.7630;ERATE=0.0021;THETA=0.0005;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 179395200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0263;AVGPOST=0.9992;RSQ=0.9868;ERATE=0.0004;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179395232 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6729;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179395331 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3912;AVGPOST=0.9981;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=853;AN=2184 GT:DS:GL:BD 0.39056778 0
1 179395375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2093;AVGPOST=0.9985;RSQ=0.9967;ERATE=0.0004;THETA=0.0009;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 179395444 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7168;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179395448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.2102;AVGPOST=0.9981;RSQ=0.9954;ERATE=0.0004;THETA=0.0005;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 179395451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.2114;AVGPOST=0.9969;RSQ=0.9927;ERATE=0.0005;THETA=0.0002;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 179395506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0253;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0003;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179395507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179395608 . CATTTGCATGTACT C 3086 PASS INDEL;BAVGPOST=0.996;BRSQ=0.883;LDAF=0.0168;AVGPOST=0.9988;RSQ=0.9684;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179395738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.860;LDAF=0.0155;AVGPOST=0.9947;RSQ=0.8627;ERATE=0.0003;THETA=0.0052;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179395790 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.569;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5853;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179396024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.762;LDAF=0.0063;AVGPOST=0.9985;RSQ=0.9042;ERATE=0.0003;THETA=0.0025;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179396066 . GC G 5623 PASS INDEL;BAVGPOST=0.963;BRSQ=0.928;LDAF=0.3660;AVGPOST=0.9502;RSQ=0.9234;ERATE=0.0044;THETA=0.0004;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 179396068 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.930;LDAF=0.7427;AVGPOST=0.9697;RSQ=0.9440;ERATE=0.0020;THETA=0.0005;AC=1634;AN=2184 GT:DS:GL:BD 0.74816847 1
1 179396126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8794;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179396134 . T TA 756 PASS INDEL;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0101;AVGPOST=0.9981;RSQ=0.9148;ERATE=0.0007;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179396247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0900;AVGPOST=0.9978;RSQ=0.9886;ERATE=0.0005;THETA=0.0010;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 179396273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5351;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179396306 . AAACAAG A 28764 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2084;AVGPOST=0.9976;RSQ=0.9942;ERATE=0.0005;THETA=0.0005;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 179396329 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0047;AVGPOST=0.9958;RSQ=0.6223;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179396367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7719;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179396383 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.5246;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179396389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6211;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179396444 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3912;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0003;THETA=0.0014;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 179396520 rs10625958 C CTG 72529 PASS INDEL;BAVGPOST=0.974;BRSQ=0.952;LDAF=0.5980;AVGPOST=0.9914;RSQ=0.9860;ERATE=0.0010;THETA=0.0008;AC=1309;AN=2184 GT:DS:GL:BD 0.59935898 1
1 179396521 rs33978118 T TGG 31311 PASS INDEL;BAVGPOST=0.973;BRSQ=0.953;LDAF=0.5866;AVGPOST=0.9701;RSQ=0.9562;ERATE=0.0026;THETA=0.0032;AC=1299;AN=2184 GT:DS:GL:BD 0.59478021 1
1 179396674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1655;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0007;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 179396675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4253;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179396749 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179396793 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8722;AVGPOST=0.9980;RSQ=0.9930;ERATE=0.0004;THETA=0.0003;AC=1906;AN=2184 GT:DS:GL:BD 0.87271065 1
1 179396822 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2089;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0002;THETA=0.0004;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179396866 . G GT 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4876;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179397145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7961;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179397181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9797;ERATE=0.0002;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179397254 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179397343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9165;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179397499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0003;THETA=0.0032;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179397521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4650;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179397523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2094;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179397569 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0002;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179397604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7995;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179397627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179397669 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7487;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179397711 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0425;AVGPOST=0.9995;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 179397732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9614;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179397844 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7345;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179397933 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.973;LDAF=0.2098;AVGPOST=0.9938;RSQ=0.9859;ERATE=0.0009;THETA=0.0004;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 179397942 . AAAAT A 1349 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0076;AVGPOST=0.9990;RSQ=0.9463;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179397986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0167;AVGPOST=0.9995;RSQ=0.9848;ERATE=0.0003;THETA=0.0008;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179397994 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5682;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179398035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1698;AVGPOST=0.9955;RSQ=0.9867;ERATE=0.0005;THETA=0.0002;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 179398036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.825;LDAF=0.0065;AVGPOST=0.9970;RSQ=0.8308;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179398038 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=0.9979;RSQ=0.9723;ERATE=0.0004;THETA=0.0008;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179398041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5977;AVGPOST=0.9934;RSQ=0.9892;ERATE=0.0006;THETA=0.0005;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 179398051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0066;AVGPOST=0.9890;RSQ=0.3405;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179398089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.8681;AVGPOST=0.9869;RSQ=0.9567;ERATE=0.0013;THETA=0.0005;AC=1905;AN=2184 GT:DS:GL:BD 0.87225276 1
1 179398096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.796;LDAF=0.0223;AVGPOST=0.9894;RSQ=0.8214;ERATE=0.0006;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 179398260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0168;AVGPOST=0.9969;RSQ=0.9201;ERATE=0.0007;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179398322 . AT A 29601 PASS INDEL;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.5954;AVGPOST=0.9908;RSQ=0.9845;ERATE=0.0012;THETA=0.0002;AC=1306;AN=2184 GT:DS:GL:BD 0.59798533 1
1 179398356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3909;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 179398536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8729;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0002;THETA=0.0006;AC=1906;AN=2184 GT:DS:GL:BD 0.87271065 1
1 179398558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179398563 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7683;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0002;THETA=0.0003;AC=1677;AN=2184 GT:DS:GL:BD 0.76785713 1
1 179398573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9863;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179398726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9915;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179398730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0251;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179398875 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2074;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 179398932 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1019;AVGPOST=0.9990;RSQ=0.9965;ERATE=0.0002;THETA=0.0010;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 179398976 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1469;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0002;THETA=0.0002;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179399106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179399149 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179399181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8906;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179399253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1654;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 179399388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2088;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179399415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1492;AVGPOST=0.9985;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 179399510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179399516 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179399650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0037;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179399802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179399904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3743;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0002;THETA=0.0002;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 179399944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7305;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179400046 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179400058 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8020;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179400125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2091;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179400135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9174;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179400260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2110;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 179400265 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179400273 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.7675;AVGPOST=0.9957;RSQ=0.9906;ERATE=0.0009;THETA=0.0002;AC=1676;AN=2184 GT:DS:GL:BD 0.76739925 1
1 179400285 . A AT 143 PASS INDEL;BAVGPOST=0.985;BRSQ=0.541;LDAF=0.0242;AVGPOST=0.9712;RSQ=0.5192;ERATE=0.0072;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179400337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.3901;AVGPOST=0.9963;RSQ=0.9935;ERATE=0.0007;THETA=0.0007;AC=853;AN=2184 GT:DS:GL:BD 0.39056778 0
1 179400384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.2058;AVGPOST=0.9957;RSQ=0.9896;ERATE=0.0007;THETA=0.0006;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 179400476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179400599 rs71733314 TTTTG T 51903 PASS INDEL;BAVGPOST=0.984;BRSQ=0.972;LDAF=0.5338;AVGPOST=0.9615;RSQ=0.9459;ERATE=0.0128;THETA=0.0003;AC=1162;AN=2184 GT:DS:GL:BD 0.53205127 1
1 179400628 . GTGT G 202 PASS INDEL;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8544;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179400698 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8298;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179400700 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.3688;AVGPOST=0.9921;RSQ=0.9862;ERATE=0.0012;THETA=0.0003;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 179400710 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.906;LDAF=0.1032;AVGPOST=0.9755;RSQ=0.9015;ERATE=0.0042;THETA=0.0003;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 179400801 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7406;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179400828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0192;AVGPOST=0.9952;RSQ=0.9086;ERATE=0.0002;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179400865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1489;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 179400874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9995;RSQ=0.9879;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179400883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1660;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 179400994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0275;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179401039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179401041 . TG T 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5149;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179401136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0038;AVGPOST=0.9982;RSQ=0.8301;ERATE=0.0003;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179401153 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0042;AVGPOST=0.9976;RSQ=0.7830;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179401238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179401254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179401349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179401423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0002;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179401432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179401503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1659;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0004;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 179401515 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179401526 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1627;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0002;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 179401537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9902;ERATE=0.0003;THETA=0.0020;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179401546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179401599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2092;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0003;THETA=0.0007;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179401664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0197;AVGPOST=0.9990;RSQ=0.9803;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179401694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8363;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179401701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0278;AVGPOST=0.9991;RSQ=0.9857;ERATE=0.0004;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179401720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8476;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179401750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179401851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6683;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179401896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5838;AVGPOST=0.9971;RSQ=0.9953;ERATE=0.0005;THETA=0.0004;AC=1273;AN=2184 GT:DS:GL:BD 0.58287543 1
1 179401969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0255;AVGPOST=0.9992;RSQ=0.9867;ERATE=0.0003;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179402005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0225;AVGPOST=0.9990;RSQ=0.9812;ERATE=0.0004;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 179402037 rs72155792 C CA 11531 PASS INDEL;BAVGPOST=0.933;BRSQ=0.825;LDAF=0.2836;AVGPOST=0.8427;RSQ=0.6843;ERATE=0.0464;THETA=0.0004;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 179402118 . A AG 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.7905;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179402146 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5357;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179402192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7267;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179402231 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0046;AVGPOST=0.9994;RSQ=0.9415;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179402340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2113;AVGPOST=0.9985;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 179402412 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8673;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179402459 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3910;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0004;THETA=0.0009;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 179402471 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7971;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179402583 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179402587 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179402660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.9075;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179402668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179402691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6027;AVGPOST=0.9933;RSQ=0.9887;ERATE=0.0018;THETA=0.0003;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 179402762 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179402815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1665;AVGPOST=0.9984;RSQ=0.9958;ERATE=0.0006;THETA=0.0005;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 179402914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8651;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179402917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7951;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179402920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7708;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=1684;AN=2184 GT:DS:GL:BD 0.77106225 1
1 179402926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.877;LDAF=0.0207;AVGPOST=0.9921;RSQ=0.8611;ERATE=0.0003;THETA=0.0010;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179403010 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1662;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 179403028 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179403091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0037;AVGPOST=0.9971;RSQ=0.7172;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179403114 rs60373127 T TG 78230 PASS INDEL;BAVGPOST=0.966;BRSQ=0.897;LDAF=0.8528;AVGPOST=0.9797;RSQ=0.9420;ERATE=0.0010;THETA=0.0004;AC=1872;AN=2184 GT:DS:GL:BD 0.85714287 1
1 179403116 . G GT 21212 PASS INDEL;BAVGPOST=0.933;BRSQ=0.817;LDAF=0.7875;AVGPOST=0.8976;RSQ=0.7844;ERATE=0.0215;THETA=0.0003;AC=1769;AN=2184 GT:DS:GL:BD 0.80998170 1
1 179403176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1661;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 179403298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179403513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1617;AVGPOST=0.9934;RSQ=0.9831;ERATE=0.0008;THETA=0.0003;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 179403530 . C CA 107 PASS INDEL;BAVGPOST=0.996;BRSQ=0.637;LDAF=0.0124;AVGPOST=0.9837;RSQ=0.4820;ERATE=0.0038;THETA=0.0034;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179403539 . GA G 46 PASS INDEL;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7902;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179403553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.971;LDAF=0.3702;AVGPOST=0.9889;RSQ=0.9824;ERATE=0.0010;THETA=0.0005;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 179403605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7504;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179403721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179403791 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179403816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.950;LDAF=0.8624;AVGPOST=0.9832;RSQ=0.9485;ERATE=0.0023;THETA=0.0004;AC=1887;AN=2184 GT:DS:GL:BD 0.86401099 1
1 179403931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1660;AVGPOST=0.9994;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 179403934 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0059;AVGPOST=0.9998;RSQ=0.9863;ERATE=0.0002;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179404013 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8730;AVGPOST=0.9987;RSQ=0.9947;ERATE=0.0006;THETA=0.0002;AC=1907;AN=2184 GT:DS:GL:BD 0.87316847 1
1 179404082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6903;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179404083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.806;LDAF=0.0073;AVGPOST=0.9964;RSQ=0.8100;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179404147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0061;AVGPOST=0.9985;RSQ=0.9068;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179404149 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8055;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179404152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2090;AVGPOST=0.9982;RSQ=0.9954;ERATE=0.0005;THETA=0.0004;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179404188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179404254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179404277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1019;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 179404322 . AAGAG A 223 PASS INDEL;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7477;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179404366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.3901;AVGPOST=0.9944;RSQ=0.9909;ERATE=0.0007;THETA=0.0006;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 179404378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5739;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179404384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0320;AVGPOST=0.9951;RSQ=0.9471;ERATE=0.0003;THETA=0.0002;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 179404385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.976;LDAF=0.3247;AVGPOST=0.9869;RSQ=0.9803;ERATE=0.0004;THETA=0.0006;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 179404439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8737;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=1908;AN=2184 GT:DS:GL:BD 0.87362635 1
1 179404508 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.7680;AVGPOST=0.9964;RSQ=0.9923;ERATE=0.0005;THETA=0.0003;AC=1679;AN=2184 GT:DS:GL:BD 0.76877290 1
1 179404540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.3438;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 179404572 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0098;AVGPOST=0.9982;RSQ=0.9337;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179404627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1664;AVGPOST=0.9974;RSQ=0.9931;ERATE=0.0004;THETA=0.0004;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 179404718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.1014;AVGPOST=0.9988;RSQ=0.9943;ERATE=0.0004;THETA=0.0006;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 179404814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0095;AVGPOST=0.9963;RSQ=0.8437;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179404894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.865;LDAF=0.0160;AVGPOST=0.9989;RSQ=0.9683;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179405011 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9012;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179405019 . CAT C 252 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5444;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179405026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4625;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179405084 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1643;AVGPOST=0.9983;RSQ=0.9947;ERATE=0.0004;THETA=0.0002;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 179405199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179405209 . AC A 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179405257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0060;AVGPOST=0.9970;RSQ=0.8031;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179405453 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8154;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179405476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.611;LDAF=0.9937;AVGPOST=0.9918;RSQ=0.4746;ERATE=0.0023;THETA=0.0004;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 179405487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7707;ERATE=0.0002;THETA=0.0039;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179405556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8726;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=1906;AN=2184 GT:DS:GL:BD 0.87271065 1
1 179405562 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.881;LDAF=0.0226;AVGPOST=0.9956;RSQ=0.9304;ERATE=0.0006;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 179405726 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9415;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179405959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.841;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8052;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179405984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6692;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179406026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179406169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7156;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179406192 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.963;LDAF=0.8649;AVGPOST=0.9907;RSQ=0.9683;ERATE=0.0011;THETA=0.0005;AC=1897;AN=2184 GT:DS:GL:BD 0.86858976 1
1 179406396 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179406436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1496;AVGPOST=0.9969;RSQ=0.9918;ERATE=0.0004;THETA=0.0011;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 179406444 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=0.9989;RSQ=0.9695;ERATE=0.0002;THETA=0.0013;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179406476 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2078;AVGPOST=0.9977;RSQ=0.9949;ERATE=0.0005;THETA=0.0006;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 179406479 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179406721 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5415;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179406780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8821;ERATE=0.0004;THETA=0.0021;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179406810 . A AAGACAG 17939 PASS INDEL;BAVGPOST=0.966;BRSQ=0.904;LDAF=0.1963;AVGPOST=0.9823;RSQ=0.9585;ERATE=0.0015;THETA=0.0003;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 179406817 . A AG 891 PASS INDEL;BAVGPOST=0.934;BRSQ=0.695;LDAF=0.1250;AVGPOST=0.9291;RSQ=0.7601;ERATE=0.0080;THETA=0.0003;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 179406899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9429;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179407009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5260;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179407058 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9107;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179407126 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.923;LDAF=0.7206;AVGPOST=0.9685;RSQ=0.9460;ERATE=0.0026;THETA=0.0007;AC=1580;AN=2184 GT:DS:GL:BD 0.72344321 1
1 179407148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.967;LDAF=0.5909;AVGPOST=0.9705;RSQ=0.9534;ERATE=0.0053;THETA=0.0003;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 179407340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6021;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0005;THETA=0.0006;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 179407367 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9327;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179407408 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7681;AVGPOST=0.9983;RSQ=0.9961;ERATE=0.0005;THETA=0.0005;AC=1677;AN=2184 GT:DS:GL:BD 0.76785713 1
1 179407499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0253;AVGPOST=0.9996;RSQ=0.9938;ERATE=0.0003;THETA=0.0001;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179407523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2099;AVGPOST=0.9971;RSQ=0.9936;ERATE=0.0004;THETA=0.0003;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 179407804 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179407949 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179407990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1419;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 179408120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.930;LDAF=0.0626;AVGPOST=0.9941;RSQ=0.9594;ERATE=0.0003;THETA=0.0002;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 179408215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4692;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179408216 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179408330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8987;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179408361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179408411 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2089;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179408506 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8811;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179408612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6017;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 179408666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179408678 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179408765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6411;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179408772 . CAG C 70 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179408890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8030;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179408925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7137;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179408939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1659;AVGPOST=0.9992;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 179408964 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0278;AVGPOST=0.9990;RSQ=0.9841;ERATE=0.0003;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179409004 rs75357224 GCACCCA G 26682 PASS INDEL;BAVGPOST=0.979;BRSQ=0.939;LDAF=0.2076;AVGPOST=0.9968;RSQ=0.9923;ERATE=0.0005;THETA=0.0004;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 179409105 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179409120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3496;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 179409243 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179409250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179409398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179409448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8726;AVGPOST=0.9987;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=1905;AN=2184 GT:DS:GL:BD 0.87225276 1
1 179409538 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179409591 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2088;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179409616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.3932;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=860;AN=2184 GT:DS:GL:BD 0.39377290 0
1 179409709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0169;AVGPOST=0.9994;RSQ=0.9856;ERATE=0.0002;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179409742 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3939;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0006;THETA=0.0003;AC=860;AN=2184 GT:DS:GL:BD 0.39377290 0
1 179409756 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6472;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179409866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6027;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 179409877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5576;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0003;THETA=0.0021;AC=1217;AN=2184 GT:DS:GL:BD 0.55723441 1
1 179409884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7659;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179409962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0141;AVGPOST=0.9974;RSQ=0.9383;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179410051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.2612;ERATE=0.0004;THETA=0.0023;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179410090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2087;AVGPOST=0.9982;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179410094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2087;AVGPOST=0.9979;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179410162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3748;AVGPOST=0.9968;RSQ=0.9950;ERATE=0.0004;THETA=0.0005;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 179410168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2090;AVGPOST=0.9978;RSQ=0.9949;ERATE=0.0004;THETA=0.0005;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179410171 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179410227 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5055;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179410229 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8111;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179410245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6032;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 179410278 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9617;ERATE=0.0002;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179410287 . GC G 16638 PASS INDEL;BAVGPOST=0.985;BRSQ=0.977;LDAF=0.3508;AVGPOST=0.9803;RSQ=0.9693;ERATE=0.0011;THETA=0.0003;AC=768;AN=2184 GT:DS:GL:BD 0.35164836 0
1 179410288 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.3540;AVGPOST=0.9862;RSQ=0.9790;ERATE=0.0003;THETA=0.0005;AC=774;AN=2184 GT:DS:GL:BD 0.35439560 0
1 179410289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.3558;AVGPOST=0.9868;RSQ=0.9802;ERATE=0.0003;THETA=0.0004;AC=776;AN=2184 GT:DS:GL:BD 0.35531136 0
1 179410370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0003;THETA=0.0049;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179410380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7902;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179410428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0128;AVGPOST=0.9985;RSQ=0.9536;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179410493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0075;AVGPOST=0.9988;RSQ=0.9360;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179410549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6016;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 179410669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9674;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179410693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2090;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0003;THETA=0.0007;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 179410745 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6037;AVGPOST=0.9971;RSQ=0.9948;ERATE=0.0007;THETA=0.0003;AC=1317;AN=2184 GT:DS:GL:BD 0.60302198 1
1 179410757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0059;AVGPOST=0.9998;RSQ=0.9826;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179410806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179410833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6031;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=1317;AN=2184 GT:DS:GL:BD 0.60302198 1
1 179410906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179410952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1494;AVGPOST=0.9981;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 179410963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1658;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0002;THETA=0.0005;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 179411004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8728;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=1906;AN=2184 GT:DS:GL:BD 0.87271065 1
1 179411016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179411041 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7011;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179411075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179411080 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0069;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179411175 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0071;AVGPOST=0.9987;RSQ=0.9247;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179411355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=0.9990;RSQ=0.9755;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179411370 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9430;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179411377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8756;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179411390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179411398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5048;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179411417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.9031;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179411422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2073;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 179411440 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6035;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 179411494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7863;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179411508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0093;AVGPOST=0.9988;RSQ=0.9487;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179411637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.885;LDAF=0.0125;AVGPOST=0.9971;RSQ=0.9089;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179411806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179411877 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179411939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0002;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179411969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0146;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0002;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179411977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2075;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0036;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 179411983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179412097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6014;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0005;THETA=0.0046;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 179412124 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2066;AVGPOST=0.9956;RSQ=0.9907;ERATE=0.0004;THETA=0.0002;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 179412144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2092;AVGPOST=0.9966;RSQ=0.9922;ERATE=0.0004;THETA=0.0005;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 179412157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6019;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0007;THETA=0.0005;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 179412172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7484;ERATE=0.0005;THETA=0.0046;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179412224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8782;ERATE=0.0002;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179412267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179412346 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7085;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179412349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6384;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179412364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1614;AVGPOST=0.9988;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 179412377 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2082;AVGPOST=0.9975;RSQ=0.9950;ERATE=0.0004;THETA=0.0002;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 179412379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179412386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2090;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 179412443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2087;AVGPOST=0.9985;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 179412462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3947;AVGPOST=0.9970;RSQ=0.9954;ERATE=0.0005;THETA=0.0003;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 179412499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8661;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179412525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2298;AVGPOST=0.9982;RSQ=0.9959;ERATE=0.0006;THETA=0.0005;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 179412563 . CATTTTT C 213 PASS INDEL;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179412744 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9826;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179412819 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0206;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179412886 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2291;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 179412938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.884;LDAF=0.0166;AVGPOST=0.9937;RSQ=0.8482;ERATE=0.0006;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179412941 . ATCT A 963 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0069;AVGPOST=0.9987;RSQ=0.9153;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179412955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.8619;AVGPOST=0.9984;RSQ=0.9950;ERATE=0.0004;THETA=0.0005;AC=1882;AN=2184 GT:DS:GL:BD 0.86172163 1
1 179413025 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.7707;AVGPOST=0.9928;RSQ=0.9858;ERATE=0.0015;THETA=0.0005;AC=1685;AN=2184 GT:DS:GL:BD 0.77152014 1
1 179413099 rs67420412 ATTTTC A 24665 PASS INDEL;BAVGPOST=0.990;BRSQ=0.971;LDAF=0.2097;AVGPOST=0.9987;RSQ=0.9966;ERATE=0.0004;THETA=0.0005;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 179413145 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0175;AVGPOST=0.9990;RSQ=0.9773;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179413259 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0113;AVGPOST=0.9989;RSQ=0.9602;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179413346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7372;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179413468 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2099;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0005;THETA=0.0005;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 179413512 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5316;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179413542 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6025;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0005;THETA=0.0007;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 179413576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0194;AVGPOST=0.9996;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179413577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179413698 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7637;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179413716 . GTA G 1624 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0194;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179413719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.921;LDAF=0.0174;AVGPOST=0.9960;RSQ=0.9227;ERATE=0.0005;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179413791 rs71114507 T TA 25970 PASS INDEL;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.2273;AVGPOST=0.9944;RSQ=0.9882;ERATE=0.0006;THETA=0.0004;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 179413806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0192;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0002;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179413819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5249;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179413984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0026;AVGPOST=0.9997;RSQ=0.9630;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179414017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0192;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179414070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179414102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179414105 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2094;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0002;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 179414108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179414158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179414262 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179414328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179414387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179414439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7368;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179414468 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0280;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179414515 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6633;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179414655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8397;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179414663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179414734 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6738;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179414829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8577;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179414842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5875;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179414907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0192;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0002;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179414966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179415092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179415194 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7377;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179415227 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2099;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0010;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 179415426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7541;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179415532 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2288;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 179415561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6197;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179415640 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0173;AVGPOST=0.9996;RSQ=0.9921;ERATE=0.0002;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179415694 . CTG C 375 PASS INDEL;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0054;AVGPOST=0.9967;RSQ=0.7688;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179415791 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9479;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179415795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0173;AVGPOST=0.9995;RSQ=0.9896;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179415834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6026;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179415852 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179415922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8276;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179415937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2279;AVGPOST=0.9974;RSQ=0.9941;ERATE=0.0006;THETA=0.0005;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 179415954 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0211;AVGPOST=0.9977;RSQ=0.9627;ERATE=0.0005;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179416094 . A AC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179416102 . GTATT G 235 PASS INDEL;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9205;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179416205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0199;AVGPOST=0.9987;RSQ=0.9782;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 179416241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2277;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0004;THETA=0.0006;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 179416244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179416256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179416270 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8861;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179416335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1951;AVGPOST=0.9986;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 179416346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2290;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0004;THETA=0.0006;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 179416378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5430;AVGPOST=0.9972;RSQ=0.9958;ERATE=0.0006;THETA=0.0003;AC=1185;AN=2184 GT:DS:GL:BD 0.54258239 1
1 179416395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1907;AVGPOST=0.9980;RSQ=0.9952;ERATE=0.0005;THETA=0.0004;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 179416423 . C CT 118 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6487;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179416446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179416454 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0172;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0002;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179416472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7395;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179416484 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2102;AVGPOST=0.9980;RSQ=0.9953;ERATE=0.0005;THETA=0.0015;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 179416502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6852;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179416568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1015;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 179416587 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179416602 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9098;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179416645 rs35304857 GT G 27957 PASS INDEL;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.2104;AVGPOST=0.9929;RSQ=0.9843;ERATE=0.0016;THETA=0.0002;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 179416651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179416720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179416761 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179416770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.9040;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179416833 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8279;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179416878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3422;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 179416919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179416944 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179416956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2103;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 179417068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2098;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0004;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 179417101 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2284;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 179417244 rs71114510 T TTTTTTTA 30308 PASS INDEL;BAVGPOST=0.950;BRSQ=0.863;LDAF=0.2170;AVGPOST=0.9881;RSQ=0.9730;ERATE=0.0006;THETA=0.0006;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 179417347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7719;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0009;AC=1685;AN=2184 GT:DS:GL:BD 0.77152014 1
1 179417451 . GCA G 486 PASS INDEL;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8622;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179417524 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2098;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0006;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 179417549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2098;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0002;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 179417614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2098;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0003;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 179417644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9405;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179417679 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8483;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179417682 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2102;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0006;THETA=0.0002;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 179417735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1018;AVGPOST=0.9992;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 179417758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0261;AVGPOST=0.9977;RSQ=0.9634;ERATE=0.0005;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179417780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.6018;AVGPOST=0.9928;RSQ=0.9881;ERATE=0.0008;THETA=0.0003;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 179417781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6394;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179417810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8147;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179417860 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0173;AVGPOST=0.9993;RSQ=0.9829;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179417919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179417926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8230;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179417984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0158;AVGPOST=0.9995;RSQ=0.9875;ERATE=0.0003;THETA=0.0029;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179418056 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2298;AVGPOST=0.9983;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 179418132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2085;AVGPOST=0.9986;RSQ=0.9967;ERATE=0.0004;THETA=0.0006;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 179418144 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0145;AVGPOST=0.9995;RSQ=0.9880;ERATE=0.0002;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179418181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2290;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0005;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 179418204 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4446;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179418307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179418328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6323;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179418353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7590;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179418354 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179418562 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.8736;AVGPOST=0.9936;RSQ=0.9798;ERATE=0.0006;THETA=0.0004;AC=1905;AN=2184 GT:DS:GL:BD 0.87225276 1
1 179418573 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179418587 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8986;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179418591 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179418603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0106;AVGPOST=0.9986;RSQ=0.9502;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179418650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179418668 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179418682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.3142;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179418784 . AT A 1901 PASS INDEL;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0258;AVGPOST=0.9982;RSQ=0.9767;ERATE=0.0004;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179418930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179418990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2301;AVGPOST=0.9952;RSQ=0.9902;ERATE=0.0010;THETA=0.0004;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 179419013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179419020 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179419076 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5843;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179419201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0040;AVGPOST=0.9944;RSQ=0.5085;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179419240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0281;AVGPOST=0.9993;RSQ=0.9889;ERATE=0.0003;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179419292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0173;AVGPOST=0.9993;RSQ=0.9826;ERATE=0.0003;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179419428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4988;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179419437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7706;AVGPOST=0.9966;RSQ=0.9930;ERATE=0.0005;THETA=0.0006;AC=1684;AN=2184 GT:DS:GL:BD 0.77106225 1
1 179419458 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9611;ERATE=0.0002;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179419476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0193;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179419541 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179419573 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8733;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0004;THETA=0.0011;AC=1907;AN=2184 GT:DS:GL:BD 0.87316847 1
1 179419575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9602;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179419608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6437;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179419689 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2256;AVGPOST=0.9962;RSQ=0.9918;ERATE=0.0008;THETA=0.0004;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 179419728 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0209;AVGPOST=0.9993;RSQ=0.9868;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179419750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8732;AVGPOST=0.9990;RSQ=0.9959;ERATE=0.0005;THETA=0.0006;AC=1907;AN=2184 GT:DS:GL:BD 0.87316847 1
1 179419854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179419867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0173;AVGPOST=0.9968;RSQ=0.9282;ERATE=0.0005;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179419949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3484;AVGPOST=0.9977;RSQ=0.9954;ERATE=0.0006;THETA=0.0007;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 179420067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0049;AVGPOST=0.9996;RSQ=0.9697;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179420095 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2084;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0028;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 179420112 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.2021;AVGPOST=0.9940;RSQ=0.9883;ERATE=0.0004;THETA=0.0002;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 179420113 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7642;AVGPOST=0.9968;RSQ=0.9935;ERATE=0.0004;THETA=0.0011;AC=1670;AN=2184 GT:DS:GL:BD 0.76465201 1
1 179420289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179420305 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8123;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179420383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6593;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0005;THETA=0.0013;AC=1440;AN=2184 GT:DS:GL:BD 0.65934068 1
1 179420594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0095;AVGPOST=0.9984;RSQ=0.9277;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179420611 . AT A 278 PASS INDEL;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9049;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179420660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0279;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179420852 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0207;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0003;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179420963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179421123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6443;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179421235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.938;LDAF=0.0242;AVGPOST=0.9987;RSQ=0.9810;ERATE=0.0002;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179421262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.866;LDAF=0.0743;AVGPOST=0.9889;RSQ=0.9424;ERATE=0.0003;THETA=0.0004;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 179421465 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8054;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179421562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.2098;AVGPOST=0.9895;RSQ=0.9759;ERATE=0.0012;THETA=0.0006;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 179421581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.964;LDAF=0.5203;AVGPOST=0.9028;RSQ=0.8631;ERATE=0.0074;THETA=0.0004;AC=1158;AN=2184 GT:DS:GL:BD 0.53021979 1
1 179421589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.866;LDAF=0.0341;AVGPOST=0.9773;RSQ=0.7313;ERATE=0.0012;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 179421594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.889;BRSQ=0.770;LDAF=0.3260;AVGPOST=0.8825;RSQ=0.8022;ERATE=0.0053;THETA=0.0005;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 179421612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.714;BRSQ=0.427;LDAF=0.6997;AVGPOST=0.7798;RSQ=0.6206;ERATE=0.0101;THETA=0.0005;AC=1652;AN=2184 GT:DS:GL:BD 0.75641024 1
1 179421620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.357;LDAF=0.1164;AVGPOST=0.8541;RSQ=0.4548;ERATE=0.0052;THETA=0.0005;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179421747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.860;BRSQ=0.312;LDAF=0.1176;AVGPOST=0.9142;RSQ=0.7043;ERATE=0.0024;THETA=0.0004;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 179421824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.828;BRSQ=0.713;LDAF=0.4768;AVGPOST=0.7523;RSQ=0.6183;ERATE=0.0276;THETA=0.0011;AC=1064;AN=2184 GT:DS:GL:BD 0.48717949 0
1 179421827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.923;BRSQ=0.671;LDAF=0.1912;AVGPOST=0.8268;RSQ=0.5731;ERATE=0.0131;THETA=0.0004;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 179421829 rs56975419 CAAAAAAAAAAAAAAAA C 528 PASS INDEL;BAVGPOST=0.985;BRSQ=0.197;LDAF=0.0199;AVGPOST=0.9757;RSQ=0.5099;ERATE=0.0019;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179421940 . C CT 289 PASS INDEL;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179421942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0039;AVGPOST=0.9968;RSQ=0.6336;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179421960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0208;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179421990 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3498;AVGPOST=0.9969;RSQ=0.9939;ERATE=0.0007;THETA=0.0003;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 179421992 rs113991466 GC G 1896 PASS INDEL;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0210;AVGPOST=0.9990;RSQ=0.9826;ERATE=0.0003;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179422039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.1493;AVGPOST=0.9973;RSQ=0.9922;ERATE=0.0005;THETA=0.0005;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 179422205 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0039;AVGPOST=0.9993;RSQ=0.9109;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179422272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5288;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179422319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.6867;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179422459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9910;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179422518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.992;LDAF=0.3419;AVGPOST=0.9962;RSQ=0.9931;ERATE=0.0004;THETA=0.0005;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 179422531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9120;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179422552 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9996;RSQ=0.9923;ERATE=0.0003;THETA=0.0008;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179422608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0171;AVGPOST=0.9988;RSQ=0.9754;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179422702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5393;AVGPOST=0.9950;RSQ=0.9929;ERATE=0.0006;THETA=0.0002;AC=1179;AN=2184 GT:DS:GL:BD 0.53983516 1
1 179422711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.911;LDAF=0.1007;AVGPOST=0.9914;RSQ=0.9642;ERATE=0.0007;THETA=0.0036;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 179422781 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0091;AVGPOST=0.9990;RSQ=0.9509;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179422889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0114;AVGPOST=0.9971;RSQ=0.8973;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179423068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0200;AVGPOST=0.9992;RSQ=0.9850;ERATE=0.0003;THETA=0.0010;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 179423120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.7728;AVGPOST=0.9971;RSQ=0.9939;ERATE=0.0003;THETA=0.0051;AC=1687;AN=2184 GT:DS:GL:BD 0.77243590 1
1 179423194 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.3479;AVGPOST=0.9910;RSQ=0.9854;ERATE=0.0013;THETA=0.0007;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 179423323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0057;AVGPOST=0.9991;RSQ=0.9274;ERATE=0.0004;THETA=0.0132;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179423489 . TG T 1895 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0250;AVGPOST=0.9996;RSQ=0.9939;ERATE=0.0002;THETA=0.0040;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179423491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.922;BRSQ=0.848;LDAF=0.3859;AVGPOST=0.9181;RSQ=0.8704;ERATE=0.0293;THETA=0.0028;AC=831;AN=2184 GT:DS:GL:BD 0.38049451 0
1 179423505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.697;LDAF=0.9537;AVGPOST=0.9689;RSQ=0.7365;ERATE=0.0041;THETA=0.0010;AC=2096;AN=2184 GT:DS:GL:BD 0.95970696 1
1 179423529 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8388;ERATE=0.0003;THETA=0.0082;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179423530 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0083;AVGPOST=0.9948;RSQ=0.7606;ERATE=0.0007;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179423545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7742;ERATE=0.0004;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179423552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1446;AVGPOST=0.9948;RSQ=0.9844;ERATE=0.0012;THETA=0.0006;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 179423620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1900;AVGPOST=0.9978;RSQ=0.9947;ERATE=0.0002;THETA=0.0012;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 179423698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9731;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179423714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0371;AVGPOST=0.9993;RSQ=0.9934;ERATE=0.0002;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 179423751 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0088;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179423836 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6884;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179423862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0043;AVGPOST=0.9990;RSQ=0.9127;ERATE=0.0002;THETA=0.0046;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179423873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179423913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0511;AVGPOST=0.9990;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 179423953 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2502;AVGPOST=0.9974;RSQ=0.9943;ERATE=0.0004;THETA=0.0004;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 179423964 . CA C 468 PASS INDEL;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0066;AVGPOST=0.9978;RSQ=0.8701;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179424022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0936;AVGPOST=0.9981;RSQ=0.9918;ERATE=0.0004;THETA=0.0002;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 179424080 . AC A 2171 PASS INDEL;BAVGPOST=0.906;BRSQ=0.433;LDAF=0.1417;AVGPOST=0.8404;RSQ=0.4838;ERATE=0.0241;THETA=0.0002;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 179424081 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.979;LDAF=0.8457;AVGPOST=0.9795;RSQ=0.9401;ERATE=0.0011;THETA=0.0014;AC=1862;AN=2184 GT:DS:GL:BD 0.85256410 1
1 179424100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.956;LDAF=0.0494;AVGPOST=0.9929;RSQ=0.9539;ERATE=0.0007;THETA=0.0006;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 179424148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0134;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0003;THETA=0.0032;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179424175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.665;LDAF=0.0045;AVGPOST=0.9963;RSQ=0.6806;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179424178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0148;AVGPOST=0.9983;RSQ=0.9466;ERATE=0.0005;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179424188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0417;AVGPOST=0.9979;RSQ=0.9792;ERATE=0.0006;THETA=0.0011;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 179424189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0025;AVGPOST=0.9971;RSQ=0.5293;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179424202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.668;LDAF=0.0049;AVGPOST=0.9972;RSQ=0.7541;ERATE=0.0006;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179424243 . AG A 2001 PASS INDEL;BAVGPOST=0.937;BRSQ=0.688;LDAF=0.1362;AVGPOST=0.8987;RSQ=0.6711;ERATE=0.0125;THETA=0.0006;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 179424263 . CG C 245 PASS INDEL;BAVGPOST=0.985;BRSQ=0.745;LDAF=0.0222;AVGPOST=0.9892;RSQ=0.8469;ERATE=0.0004;THETA=0.0012;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 179424264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0412;AVGPOST=0.9988;RSQ=0.9862;ERATE=0.0004;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 179424265 . CT C 211 PASS INDEL;BAVGPOST=0.985;BRSQ=0.745;LDAF=0.0245;AVGPOST=0.9907;RSQ=0.8829;ERATE=0.0003;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179424342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0546;AVGPOST=0.9943;RSQ=0.9650;ERATE=0.0004;THETA=0.0019;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 179424378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.827;LDAF=0.0173;AVGPOST=0.9983;RSQ=0.9625;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179424380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1050;AVGPOST=0.9950;RSQ=0.9804;ERATE=0.0004;THETA=0.0008;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 179424389 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.934;LDAF=0.3488;AVGPOST=0.9769;RSQ=0.9624;ERATE=0.0006;THETA=0.0018;AC=768;AN=2184 GT:DS:GL:BD 0.35164836 0
1 179424415 rs59272099 AAAAAAAAAAAAAAGT A 1084 PASS INDEL;BAVGPOST=0.943;BRSQ=0.308;LDAF=0.0548;AVGPOST=0.9331;RSQ=0.5002;ERATE=0.0019;THETA=0.0007;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179424416 rs59272099 AAAAAAAAAAAAAGT A 1045 PASS INDEL;BAVGPOST=0.939;BRSQ=0.297;LDAF=0.0650;AVGPOST=0.9150;RSQ=0.4835;ERATE=0.0023;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 179424427 rs59272099 A AC 141 PASS INDEL;BAVGPOST=0.964;BRSQ=0.577;LDAF=0.0631;AVGPOST=0.9614;RSQ=0.7425;ERATE=0.0014;THETA=0.0005;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 179424453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.708;LDAF=0.1200;AVGPOST=0.9198;RSQ=0.7112;ERATE=0.0107;THETA=0.0053;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 179424455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.708;LDAF=0.0513;AVGPOST=0.9345;RSQ=0.4891;ERATE=0.0079;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179424466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.408;LDAF=0.0175;AVGPOST=0.9829;RSQ=0.6156;ERATE=0.0014;THETA=0.0025;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179424477 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0328;AVGPOST=0.9962;RSQ=0.9520;ERATE=0.0007;THETA=0.0027;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 179424480 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.676;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.6988;ERATE=0.0007;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179424493 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0256;AVGPOST=0.9986;RSQ=0.9776;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179424503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.472;LDAF=0.0186;AVGPOST=0.9687;RSQ=0.3468;ERATE=0.0034;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179424544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0526;AVGPOST=0.9989;RSQ=0.9918;ERATE=0.0003;THETA=0.0008;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 179424545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8777;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179424546 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0525;AVGPOST=0.9989;RSQ=0.9921;ERATE=0.0004;THETA=0.0003;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 179424581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.5894;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179424590 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0533;AVGPOST=0.9965;RSQ=0.9763;ERATE=0.0006;THETA=0.0007;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 179424620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0422;AVGPOST=0.9981;RSQ=0.9790;ERATE=0.0003;THETA=0.0029;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 179424646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.591;LDAF=0.0086;AVGPOST=0.9917;RSQ=0.6189;ERATE=0.0006;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179424707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.944;LDAF=0.0565;AVGPOST=0.9914;RSQ=0.9476;ERATE=0.0006;THETA=0.0027;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 179424723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.693;LDAF=0.1342;AVGPOST=0.9226;RSQ=0.7504;ERATE=0.0052;THETA=0.0011;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 179424751 . T TA 59 PASS INDEL;BAVGPOST=0.968;BRSQ=0.485;LDAF=0.0548;AVGPOST=0.9354;RSQ=0.5446;ERATE=0.0095;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 179425089 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.771;LDAF=0.7522;AVGPOST=0.8878;RSQ=0.7616;ERATE=0.0253;THETA=0.0066;AC=1673;AN=2184 GT:DS:GL:BD 0.76602566 1
1 179425103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.545;LDAF=0.0037;AVGPOST=0.9966;RSQ=0.6074;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179425169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7335;ERATE=0.0002;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179425282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1030;AVGPOST=0.9984;RSQ=0.9930;ERATE=0.0003;THETA=0.0041;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 179425328 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.675;LDAF=0.0043;AVGPOST=0.9955;RSQ=0.5971;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179425431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0260;AVGPOST=0.9968;RSQ=0.9532;ERATE=0.0013;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179425459 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0275;AVGPOST=0.9960;RSQ=0.9439;ERATE=0.0027;THETA=0.0017;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179425546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0002;THETA=0.0019;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179425679 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179425871 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0129;AVGPOST=0.9989;RSQ=0.9652;ERATE=0.0007;THETA=0.0048;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179426054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179426175 rs71569248 CCTGGT C 20514 PASS INDEL;BAVGPOST=0.976;BRSQ=0.912;LDAF=0.1516;AVGPOST=0.9942;RSQ=0.9827;ERATE=0.0005;THETA=0.0044;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 179426240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1803;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 179426268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1033;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0002;THETA=0.0002;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 179426284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9743;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179426319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9582;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179426347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2043;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0022;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 179426373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179426390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2047;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0005;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 179426475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6860;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179426512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0252;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179426513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179426528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8719;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179426633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0412;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0002;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179426635 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0036;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179426730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8377;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179426730 . GCC G 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5503;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179426774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2032;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0003;THETA=0.0019;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 179426842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8540;AVGPOST=0.9968;RSQ=0.9908;ERATE=0.0005;THETA=0.0003;AC=1867;AN=2184 GT:DS:GL:BD 0.85485345 1
1 179426954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2032;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 179426994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1794;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0002;THETA=0.0002;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 179427008 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0412;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179427081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0412;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0002;THETA=0.0013;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179427227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2031;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 179427351 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179427369 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1493;AVGPOST=0.9981;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 179427403 . C CCA 7034 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0414;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179427506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5867;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179427570 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2023;AVGPOST=0.9975;RSQ=0.9944;ERATE=0.0004;THETA=0.0004;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 179427632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2427;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0005;THETA=0.0004;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 179427654 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0437;AVGPOST=0.9961;RSQ=0.9619;ERATE=0.0007;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 179427714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4419;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179427758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0029;AVGPOST=0.9952;RSQ=0.3391;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179427759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2033;AVGPOST=0.9975;RSQ=0.9933;ERATE=0.0006;THETA=0.0006;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 179427971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3592;AVGPOST=0.9950;RSQ=0.9916;ERATE=0.0009;THETA=0.0003;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 179427980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.712;LDAF=0.0162;AVGPOST=0.9897;RSQ=0.7579;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179428001 rs34485169 T TA 15294 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2474;AVGPOST=0.9930;RSQ=0.9843;ERATE=0.0011;THETA=0.0036;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 179428246 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0412;AVGPOST=0.9996;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179428261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.851;LDAF=0.0306;AVGPOST=0.9942;RSQ=0.9218;ERATE=0.0005;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 179428264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4843;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179428333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0415;AVGPOST=0.9992;RSQ=0.9908;ERATE=0.0004;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179428362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.1023;AVGPOST=0.9973;RSQ=0.9876;ERATE=0.0004;THETA=0.0011;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 179428613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9985;RSQ=0.3988;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179428636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7561;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179428694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0252;AVGPOST=0.9995;RSQ=0.9922;ERATE=0.0003;THETA=0.0041;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179428798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0413;AVGPOST=0.9995;RSQ=0.9941;ERATE=0.0003;THETA=0.0009;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179428917 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.944;LDAF=0.2309;AVGPOST=0.9833;RSQ=0.9653;ERATE=0.0015;THETA=0.0005;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 179428939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.889;LDAF=0.1470;AVGPOST=0.9729;RSQ=0.9260;ERATE=0.0012;THETA=0.0035;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 179428944 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.3573;AVGPOST=0.9933;RSQ=0.9889;ERATE=0.0005;THETA=0.0003;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 179428976 rs71895386 CCCTT C 11788 PASS INDEL;BAVGPOST=0.962;BRSQ=0.898;LDAF=0.2245;AVGPOST=0.9741;RSQ=0.9455;ERATE=0.0013;THETA=0.0005;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 179428980 rs71895386 T TC 874 PASS INDEL;BAVGPOST=0.985;BRSQ=0.680;LDAF=0.0248;AVGPOST=0.9870;RSQ=0.7933;ERATE=0.0008;THETA=0.0009;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 179429069 rs71569251 TTC T 8750 PASS INDEL;BAVGPOST=0.952;BRSQ=0.855;LDAF=0.1687;AVGPOST=0.9687;RSQ=0.9243;ERATE=0.0022;THETA=0.0013;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 179429093 . CTTCT C 34215 PASS INDEL;BAVGPOST=0.978;BRSQ=0.958;LDAF=0.3606;AVGPOST=0.9739;RSQ=0.9590;ERATE=0.0035;THETA=0.0016;AC=789;AN=2184 GT:DS:GL:BD 0.36126372 0
1 179429123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.777;LDAF=0.0803;AVGPOST=0.9508;RSQ=0.7408;ERATE=0.0080;THETA=0.0019;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 179429140 rs72281142 T TC 666 PASS INDEL;BAVGPOST=0.983;BRSQ=0.740;LDAF=0.0343;AVGPOST=0.9816;RSQ=0.8029;ERATE=0.0010;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 179429143 rs72281142 C CT 1036 PASS INDEL;BAVGPOST=0.960;BRSQ=0.867;LDAF=0.1301;AVGPOST=0.9692;RSQ=0.9129;ERATE=0.0004;THETA=0.0038;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 179429144 rs72281142 TC T 5819 PASS INDEL;BAVGPOST=0.936;BRSQ=0.796;LDAF=0.1579;AVGPOST=0.9520;RSQ=0.8790;ERATE=0.0020;THETA=0.0006;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 179429196 . C CT 22 PASS INDEL;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0067;AVGPOST=0.9944;RSQ=0.6535;ERATE=0.0016;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179429214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8449;ERATE=0.0004;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179429226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.735;LDAF=0.0189;AVGPOST=0.9972;RSQ=0.9479;ERATE=0.0004;THETA=0.0017;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179429242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0417;AVGPOST=0.9974;RSQ=0.9736;ERATE=0.0004;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179429243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.833;LDAF=0.1813;AVGPOST=0.9715;RSQ=0.9349;ERATE=0.0012;THETA=0.0006;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 179429316 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.951;LDAF=0.2335;AVGPOST=0.9872;RSQ=0.9725;ERATE=0.0009;THETA=0.0009;AC=516;AN=2184 GT:DS:GL:BD 0.23626374 0
1 179429341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.951;LDAF=0.1958;AVGPOST=0.9915;RSQ=0.9793;ERATE=0.0005;THETA=0.0004;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 179429351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.697;LDAF=0.0101;AVGPOST=0.9960;RSQ=0.8469;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179429355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.513;LDAF=0.9947;AVGPOST=0.9964;RSQ=0.7342;ERATE=0.0004;THETA=0.0027;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 179429361 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6789;ERATE=0.0004;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179429368 . C CACCCTGTG 7068 PASS INDEL;BAVGPOST=0.996;BRSQ=0.953;LDAF=0.0407;AVGPOST=0.9985;RSQ=0.9858;ERATE=0.0003;THETA=0.0004;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179429398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.914;LDAF=0.0274;AVGPOST=0.9977;RSQ=0.9664;ERATE=0.0003;THETA=0.0008;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179429424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.977;LDAF=0.2014;AVGPOST=0.9954;RSQ=0.9892;ERATE=0.0007;THETA=0.0009;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 179429573 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9230;ERATE=0.0003;THETA=0.0063;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179429642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.954;LDAF=0.1939;AVGPOST=0.9884;RSQ=0.9748;ERATE=0.0008;THETA=0.0012;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 179429650 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9590;ERATE=0.0003;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179429702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.927;LDAF=0.1656;AVGPOST=0.9734;RSQ=0.9379;ERATE=0.0013;THETA=0.0015;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 179429730 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.914;LDAF=0.1427;AVGPOST=0.9716;RSQ=0.9264;ERATE=0.0004;THETA=0.0003;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 179429737 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.918;LDAF=0.4577;AVGPOST=0.9445;RSQ=0.9241;ERATE=0.0054;THETA=0.0008;AC=1020;AN=2184 GT:DS:GL:BD 0.46703297 0
1 179429754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.903;LDAF=0.1671;AVGPOST=0.9747;RSQ=0.9388;ERATE=0.0006;THETA=0.0006;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 179429764 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.668;LDAF=0.0394;AVGPOST=0.9648;RSQ=0.6454;ERATE=0.0074;THETA=0.0010;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 179429774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.828;LDAF=0.0394;AVGPOST=0.9812;RSQ=0.8091;ERATE=0.0075;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 179429918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.937;LDAF=0.1742;AVGPOST=0.9775;RSQ=0.9426;ERATE=0.0029;THETA=0.0005;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 179429924 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0240;AVGPOST=0.9965;RSQ=0.9419;ERATE=0.0005;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 179429927 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179429958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.972;LDAF=0.8405;AVGPOST=0.9709;RSQ=0.9237;ERATE=0.0056;THETA=0.0005;AC=1850;AN=2184 GT:DS:GL:BD 0.84706962 1
1 179430001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0412;AVGPOST=0.9984;RSQ=0.9864;ERATE=0.0003;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179430015 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7505;ERATE=0.0005;THETA=0.0057;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179430272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0476;AVGPOST=0.9917;RSQ=0.9342;ERATE=0.0006;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 179430366 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.790;LDAF=0.0080;AVGPOST=0.9963;RSQ=0.8348;ERATE=0.0004;THETA=0.0045;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179430381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.953;LDAF=0.1815;AVGPOST=0.9881;RSQ=0.9737;ERATE=0.0006;THETA=0.0002;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 179430400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0234;AVGPOST=0.9994;RSQ=0.9877;ERATE=0.0004;THETA=0.0025;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 179430530 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0235;AVGPOST=0.9995;RSQ=0.9922;ERATE=0.0003;THETA=0.0014;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 179430547 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.968;LDAF=0.2417;AVGPOST=0.9959;RSQ=0.9910;ERATE=0.0005;THETA=0.0011;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 179430604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.875;LDAF=0.1993;AVGPOST=0.9634;RSQ=0.9224;ERATE=0.0054;THETA=0.0004;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 179430639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.936;LDAF=0.0401;AVGPOST=0.9973;RSQ=0.9737;ERATE=0.0004;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179430644 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0234;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0003;THETA=0.0010;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 179430794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.923;LDAF=0.0351;AVGPOST=0.9937;RSQ=0.9342;ERATE=0.0006;THETA=0.0007;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 179430831 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179430835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4741;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179430848 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0105;AVGPOST=0.9973;RSQ=0.9046;ERATE=0.0003;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179430955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.944;LDAF=0.2235;AVGPOST=0.9863;RSQ=0.9726;ERATE=0.0004;THETA=0.0007;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 179431088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.953;LDAF=0.2222;AVGPOST=0.9888;RSQ=0.9770;ERATE=0.0003;THETA=0.0004;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 179431118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0069;AVGPOST=0.9927;RSQ=0.5848;ERATE=0.0010;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179431247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.910;LDAF=0.4544;AVGPOST=0.9636;RSQ=0.9467;ERATE=0.0010;THETA=0.0006;AC=1004;AN=2184 GT:DS:GL:BD 0.45970696 0
1 179431259 . AG A 4992 PASS INDEL;BAVGPOST=0.919;BRSQ=0.782;LDAF=0.2206;AVGPOST=0.9273;RSQ=0.8435;ERATE=0.0056;THETA=0.0009;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 179431275 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.972;LDAF=0.1357;AVGPOST=0.9926;RSQ=0.9756;ERATE=0.0005;THETA=0.0013;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 179431354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.671;LDAF=0.0369;AVGPOST=0.9752;RSQ=0.7297;ERATE=0.0030;THETA=0.0009;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179431362 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.975;LDAF=0.8694;AVGPOST=0.9930;RSQ=0.9758;ERATE=0.0005;THETA=0.0005;AC=1902;AN=2184 GT:DS:GL:BD 0.87087911 1
1 179431386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2465;AVGPOST=0.9883;RSQ=0.9767;ERATE=0.0011;THETA=0.0008;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 179431541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.938;LDAF=0.1656;AVGPOST=0.9906;RSQ=0.9747;ERATE=0.0005;THETA=0.0004;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 179431593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179431609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6765;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179431613 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.869;LDAF=0.4028;AVGPOST=0.9345;RSQ=0.9135;ERATE=0.0020;THETA=0.0005;AC=876;AN=2184 GT:DS:GL:BD 0.40109891 0
1 179431615 . T TC 125 PASS INDEL;BAVGPOST=0.968;BRSQ=0.426;LDAF=0.0294;AVGPOST=0.9718;RSQ=0.6117;ERATE=0.0051;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179431671 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.536;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6799;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179431672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7005;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179431710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.937;LDAF=0.1016;AVGPOST=0.9917;RSQ=0.9669;ERATE=0.0003;THETA=0.0007;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 179431768 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.395;LDAF=0.0079;AVGPOST=0.9902;RSQ=0.5135;ERATE=0.0013;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179431780 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5758;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179431855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1465;AVGPOST=0.9971;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 179431891 rs71114518 T TC 20 PASS INDEL;BAVGPOST=0.961;BRSQ=0.558;LDAF=0.0535;AVGPOST=0.9679;RSQ=0.7810;ERATE=0.0010;THETA=0.0004;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 179431899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.2411;AVGPOST=0.9951;RSQ=0.9897;ERATE=0.0004;THETA=0.0045;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 179431911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.3339;AVGPOST=0.9944;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 179431930 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9431;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179431939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2425;AVGPOST=0.9964;RSQ=0.9926;ERATE=0.0003;THETA=0.0023;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 179431955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179432043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.668;LDAF=0.0338;AVGPOST=0.9849;RSQ=0.8461;ERATE=0.0004;THETA=0.0011;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 179432251 . TC T 71 PASS INDEL;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7830;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179432270 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.951;LDAF=0.1952;AVGPOST=0.9826;RSQ=0.9619;ERATE=0.0023;THETA=0.0005;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 179432300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.945;LDAF=0.1979;AVGPOST=0.9908;RSQ=0.9786;ERATE=0.0008;THETA=0.0013;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 179432382 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179432406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.935;LDAF=0.0287;AVGPOST=0.9974;RSQ=0.9726;ERATE=0.0002;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179432473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.4345;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179432593 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0482;AVGPOST=0.9917;RSQ=0.9378;ERATE=0.0005;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 179432645 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.909;LDAF=0.1609;AVGPOST=0.9674;RSQ=0.9207;ERATE=0.0006;THETA=0.0003;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 179432651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.913;LDAF=0.1225;AVGPOST=0.9691;RSQ=0.9113;ERATE=0.0003;THETA=0.0006;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 179432749 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5578;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179432789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.955;LDAF=0.4711;AVGPOST=0.9779;RSQ=0.9690;ERATE=0.0008;THETA=0.0007;AC=1037;AN=2184 GT:DS:GL:BD 0.47481686 0
1 179432791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.790;LDAF=0.0058;AVGPOST=0.9985;RSQ=0.8863;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179432826 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.896;LDAF=0.0405;AVGPOST=0.9982;RSQ=0.9825;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179432857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1498;AVGPOST=0.9966;RSQ=0.9899;ERATE=0.0003;THETA=0.0007;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 179432875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0146;AVGPOST=0.9959;RSQ=0.8804;ERATE=0.0005;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179433005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.897;LDAF=0.0305;AVGPOST=0.9942;RSQ=0.9229;ERATE=0.0006;THETA=0.0067;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179433016 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.902;LDAF=0.1752;AVGPOST=0.9866;RSQ=0.9638;ERATE=0.0007;THETA=0.0004;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 179433084 . G GT 14353 PASS INDEL;BAVGPOST=0.986;BRSQ=0.955;LDAF=0.1405;AVGPOST=0.9896;RSQ=0.9687;ERATE=0.0009;THETA=0.0005;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 179433164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0188;AVGPOST=0.9992;RSQ=0.9826;ERATE=0.0002;THETA=0.0024;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179433176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5804;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179433295 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.925;LDAF=0.2157;AVGPOST=0.9787;RSQ=0.9556;ERATE=0.0013;THETA=0.0044;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 179433323 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0069;AVGPOST=0.9955;RSQ=0.7549;ERATE=0.0005;THETA=0.0048;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179433353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.923;LDAF=0.1736;AVGPOST=0.9908;RSQ=0.9761;ERATE=0.0006;THETA=0.0007;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 179433426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.954;LDAF=0.2020;AVGPOST=0.9786;RSQ=0.9524;ERATE=0.0018;THETA=0.0007;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 179433501 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4745;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179433592 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8391;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179433618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2022;AVGPOST=0.9949;RSQ=0.9886;ERATE=0.0004;THETA=0.0010;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 179433648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0253;AVGPOST=0.9995;RSQ=0.9914;ERATE=0.0003;THETA=0.0024;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179433653 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0416;AVGPOST=0.9984;RSQ=0.9858;ERATE=0.0003;THETA=0.0008;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179433691 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.5431;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179433727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.819;LDAF=0.8314;AVGPOST=0.9452;RSQ=0.8580;ERATE=0.0021;THETA=0.0002;AC=1842;AN=2184 GT:DS:GL:BD 0.84340662 1
1 179433748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0457;AVGPOST=0.9908;RSQ=0.9240;ERATE=0.0008;THETA=0.0002;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 179433783 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0128;AVGPOST=0.9934;RSQ=0.7917;ERATE=0.0006;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179433785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0114;AVGPOST=0.9960;RSQ=0.8494;ERATE=0.0006;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179433846 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0194;AVGPOST=0.9991;RSQ=0.9810;ERATE=0.0003;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179433854 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.972;LDAF=0.1985;AVGPOST=0.9879;RSQ=0.9697;ERATE=0.0020;THETA=0.0004;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 179433922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0275;AVGPOST=0.9996;RSQ=0.9940;ERATE=0.0003;THETA=0.0014;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179433958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0403;AVGPOST=0.9972;RSQ=0.9750;ERATE=0.0004;THETA=0.0015;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 179433970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1043;AVGPOST=0.9952;RSQ=0.9804;ERATE=0.0003;THETA=0.0007;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 179433981 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.933;LDAF=0.1829;AVGPOST=0.9802;RSQ=0.9560;ERATE=0.0009;THETA=0.0005;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 179433999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.939;LDAF=0.2218;AVGPOST=0.9824;RSQ=0.9636;ERATE=0.0008;THETA=0.0003;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 179434043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7928;ERATE=0.0003;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179434127 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179434155 . CT C 2354 PASS INDEL;BAVGPOST=0.926;BRSQ=0.710;LDAF=0.1291;AVGPOST=0.9484;RSQ=0.8494;ERATE=0.0015;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 179434218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.937;LDAF=0.4704;AVGPOST=0.9743;RSQ=0.9635;ERATE=0.0011;THETA=0.0024;AC=1035;AN=2184 GT:DS:GL:BD 0.47390109 0
1 179434279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179434291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0249;AVGPOST=0.9987;RSQ=0.9795;ERATE=0.0003;THETA=0.0011;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179434299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2434;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0004;THETA=0.0010;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 179434331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.2419;AVGPOST=0.9969;RSQ=0.9932;ERATE=0.0006;THETA=0.0005;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 179434396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8739;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179434436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0189;AVGPOST=0.9994;RSQ=0.9871;ERATE=0.0002;THETA=0.0017;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179434474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0037;AVGPOST=0.9962;RSQ=0.5697;ERATE=0.0005;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179434530 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1507;AVGPOST=0.9937;RSQ=0.9807;ERATE=0.0007;THETA=0.0002;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 179434558 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.666;LDAF=0.0063;AVGPOST=0.9953;RSQ=0.7247;ERATE=0.0003;THETA=0.0043;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179434604 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.971;LDAF=0.1975;AVGPOST=0.9925;RSQ=0.9846;ERATE=0.0002;THETA=0.0004;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 179434609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.971;LDAF=0.1955;AVGPOST=0.9920;RSQ=0.9825;ERATE=0.0006;THETA=0.0024;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 179434648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4851;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179434651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0418;AVGPOST=0.9986;RSQ=0.9857;ERATE=0.0004;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179434682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4432;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179434696 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1043;AVGPOST=0.9972;RSQ=0.9864;ERATE=0.0004;THETA=0.0005;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 179434705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.808;LDAF=0.8241;AVGPOST=0.9739;RSQ=0.9343;ERATE=0.0016;THETA=0.0003;AC=1814;AN=2184 GT:DS:GL:BD 0.83058608 1
1 179434751 . CTG C 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6776;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179434789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0236;AVGPOST=0.9989;RSQ=0.9814;ERATE=0.0004;THETA=0.0014;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 179434797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.973;LDAF=0.2000;AVGPOST=0.9962;RSQ=0.9913;ERATE=0.0005;THETA=0.0009;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 179434850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179434935 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0415;AVGPOST=0.9992;RSQ=0.9916;ERATE=0.0003;THETA=0.0007;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179434941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2020;AVGPOST=0.9971;RSQ=0.9929;ERATE=0.0004;THETA=0.0018;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 179434962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179435025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2021;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 179435042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179435059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7553;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179435061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8103;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179435109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.943;LDAF=0.1954;AVGPOST=0.9913;RSQ=0.9808;ERATE=0.0004;THETA=0.0009;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 179435115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0418;AVGPOST=0.9984;RSQ=0.9834;ERATE=0.0004;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179435140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6300;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179435147 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7936;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179435206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1040;AVGPOST=0.9961;RSQ=0.9824;ERATE=0.0004;THETA=0.0004;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 179435220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0236;AVGPOST=0.9994;RSQ=0.9875;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 179435232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1801;AVGPOST=0.9973;RSQ=0.9922;ERATE=0.0008;THETA=0.0003;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 179435307 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.960;LDAF=0.1910;AVGPOST=0.9911;RSQ=0.9799;ERATE=0.0006;THETA=0.0004;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 179435371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0292;AVGPOST=0.9994;RSQ=0.9910;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179435405 rs71114519 TTTC T 19400 PASS INDEL;BAVGPOST=0.801;BRSQ=0.586;LDAF=0.6342;AVGPOST=0.7488;RSQ=0.5569;ERATE=0.0533;THETA=0.0006;AC=1489;AN=2184 GT:DS:GL:BD 0.68177658 1
1 179435409 rs34143446 TTC T 241 PASS INDEL;BAVGPOST=0.932;BRSQ=0.418;LDAF=0.0811;AVGPOST=0.9022;RSQ=0.4963;ERATE=0.0136;THETA=0.0003;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 179435419 . TC T 29850 PASS INDEL;BAVGPOST=0.969;BRSQ=0.892;LDAF=0.8233;AVGPOST=0.9438;RSQ=0.8505;ERATE=0.0079;THETA=0.0005;AC=1829;AN=2184 GT:DS:GL:BD 0.83745420 1
1 179435420 rs71297884 C CT 5567 PASS INDEL;BAVGPOST=0.802;BRSQ=0.378;LDAF=0.7770;AVGPOST=0.7723;RSQ=0.4865;ERATE=0.0149;THETA=0.0013;AC=1793;AN=2184 GT:DS:GL:BD 0.82097071 1
1 179435446 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0087;AVGPOST=0.9963;RSQ=0.8099;ERATE=0.0007;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179435551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0002;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179435576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0240;AVGPOST=0.9996;RSQ=0.9926;ERATE=0.0003;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179435593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.960;LDAF=0.2590;AVGPOST=0.9924;RSQ=0.9839;ERATE=0.0005;THETA=0.0003;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 179435602 rs112733901 C CT 15123 PASS INDEL;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.2032;AVGPOST=0.9968;RSQ=0.9916;ERATE=0.0005;THETA=0.0001;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 179435615 . GT G 86 PASS INDEL;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6613;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179435844 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5162;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179435876 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0302;AVGPOST=0.9974;RSQ=0.9688;ERATE=0.0003;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179435899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1457;AVGPOST=0.9982;RSQ=0.9947;ERATE=0.0003;THETA=0.0007;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 179435935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179435940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179436087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6346;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179436190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0412;AVGPOST=0.9996;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179436228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2032;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 179436250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0413;AVGPOST=0.9994;RSQ=0.9935;ERATE=0.0003;THETA=0.0044;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179436288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2431;AVGPOST=0.9966;RSQ=0.9933;ERATE=0.0003;THETA=0.0015;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 179436312 rs77589195 GT G 12662 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2011;AVGPOST=0.9945;RSQ=0.9868;ERATE=0.0008;THETA=0.0008;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 179436334 rs71114521 C CA 18883 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2413;AVGPOST=0.9920;RSQ=0.9834;ERATE=0.0009;THETA=0.0043;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 179436359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9463;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179436380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2020;AVGPOST=0.9970;RSQ=0.9934;ERATE=0.0005;THETA=0.0007;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 179436445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179436583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.726;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9172;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179436635 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179436649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0043;AVGPOST=0.9969;RSQ=0.7042;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179436661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8303;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179436674 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2022;AVGPOST=0.9986;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 179437158 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8411;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179437181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179437263 . C CT 4859 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0416;AVGPOST=0.9989;RSQ=0.9881;ERATE=0.0005;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179437272 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8796;ERATE=0.0010;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179437305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.884;LDAF=0.0168;AVGPOST=0.9967;RSQ=0.9274;ERATE=0.0005;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179437327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9307;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179437544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179437659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0006;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179437662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179437707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179437753 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179437777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179437817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0274;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179437827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8561;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0008;AC=1869;AN=2184 GT:DS:GL:BD 0.85576922 1
1 179437884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179437970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0238;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179438001 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7258;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179438138 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0240;AVGPOST=0.9995;RSQ=0.9916;ERATE=0.0003;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179438145 . AC A 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6871;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179438211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.718;LDAF=0.0051;AVGPOST=0.9974;RSQ=0.7811;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179438254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.923;LDAF=0.2005;AVGPOST=0.9946;RSQ=0.9873;ERATE=0.0004;THETA=0.0002;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 179438318 . GC G 2058 PASS INDEL;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0189;AVGPOST=0.9995;RSQ=0.9892;ERATE=0.0004;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179438508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2032;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 179438543 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2030;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 179438545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2034;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 179438564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7712;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179438586 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1794;AVGPOST=0.9984;RSQ=0.9957;ERATE=0.0002;THETA=0.0002;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 179438593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2029;AVGPOST=0.9984;RSQ=0.9962;ERATE=0.0003;THETA=0.0008;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 179438609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0250;AVGPOST=0.9980;RSQ=0.9697;ERATE=0.0004;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179438615 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7923;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179438644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0412;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179438657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179438760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4939;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179438811 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0238;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179438883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2031;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0014;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 179438983 . CTGT C 32 PASS INDEL;BAVGPOST=0.996;BRSQ=0.700;LDAF=0.0080;AVGPOST=0.9918;RSQ=0.5992;ERATE=0.0031;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179438985 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0238;AVGPOST=0.9998;RSQ=0.9965;ERATE=0.0002;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179439067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2441;AVGPOST=0.9979;RSQ=0.9948;ERATE=0.0006;THETA=0.0003;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 179439085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7704;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179439147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179439159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179439239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6861;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179439376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1790;AVGPOST=0.9975;RSQ=0.9930;ERATE=0.0007;THETA=0.0010;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 179439400 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0117;AVGPOST=0.9992;RSQ=0.9718;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179439481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0429;AVGPOST=0.9990;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 179439573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0416;AVGPOST=0.9989;RSQ=0.9897;ERATE=0.0003;THETA=0.0002;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179439781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5371;AVGPOST=0.9962;RSQ=0.9947;ERATE=0.0005;THETA=0.0004;AC=1170;AN=2184 GT:DS:GL:BD 0.53571427 1
1 179439831 . TTTC T 3864 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0239;AVGPOST=0.9995;RSQ=0.9912;ERATE=0.0004;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179439861 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.8727;AVGPOST=0.9966;RSQ=0.9873;ERATE=0.0004;THETA=0.0003;AC=1906;AN=2184 GT:DS:GL:BD 0.87271065 1
1 179439962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179440019 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6013;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 179440060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1504;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0003;THETA=0.0008;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 179440143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1042;AVGPOST=0.9974;RSQ=0.9900;ERATE=0.0004;THETA=0.0007;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 179440245 . GT G 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179440250 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179440341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5367;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179440439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0646;AVGPOST=0.9988;RSQ=0.9934;ERATE=0.0003;THETA=0.0007;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 179440451 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1030;AVGPOST=0.9985;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 179440478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9646;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179440484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3578;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0010;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 179440837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7588;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179440892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1498;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 179440912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3577;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 179440985 . A AT 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179441027 . C CT 177 PASS INDEL;BAVGPOST=0.996;BRSQ=0.670;LDAF=0.0154;AVGPOST=0.9785;RSQ=0.4425;ERATE=0.0046;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179441043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1500;AVGPOST=0.9964;RSQ=0.9891;ERATE=0.0009;THETA=0.0004;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 179441115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1814;AVGPOST=0.9954;RSQ=0.9882;ERATE=0.0004;THETA=0.0001;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 179441155 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0412;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0002;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179441171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0243;AVGPOST=0.9989;RSQ=0.9803;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179441186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.966;LDAF=0.5313;AVGPOST=0.9919;RSQ=0.9885;ERATE=0.0008;THETA=0.0007;AC=1163;AN=2184 GT:DS:GL:BD 0.53250915 1
1 179441202 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0655;AVGPOST=0.9991;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 179441252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.692;LDAF=0.0162;AVGPOST=0.9926;RSQ=0.8259;ERATE=0.0005;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179441310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0650;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 179441322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7613;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179441326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5348;AVGPOST=0.9957;RSQ=0.9943;ERATE=0.0006;THETA=0.0004;AC=1167;AN=2184 GT:DS:GL:BD 0.53434068 1
1 179441372 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0412;AVGPOST=0.9994;RSQ=0.9935;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179441449 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5364;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179441450 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.9032;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179441517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0002;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179441552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179441609 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5372;AVGPOST=0.9984;RSQ=0.9979;ERATE=0.0003;THETA=0.0010;AC=1173;AN=2184 GT:DS:GL:BD 0.53708792 1
1 179441653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7048;AVGPOST=0.9982;RSQ=0.9963;ERATE=0.0005;THETA=0.0013;AC=1539;AN=2184 GT:DS:GL:BD 0.70467031 1
1 179441687 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3575;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0004;THETA=0.0006;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 179441820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1034;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 179441908 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5339;AVGPOST=0.9963;RSQ=0.9947;ERATE=0.0008;THETA=0.0005;AC=1167;AN=2184 GT:DS:GL:BD 0.53434068 1
1 179441918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179441958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6020;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179441980 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5364;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0005;THETA=0.0004;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179442016 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8872;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179442123 . TC T 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3437;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179442140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0650;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 179442181 . CTTGTT C 608 PASS INDEL;BAVGPOST=0.998;BRSQ=0.745;LDAF=0.0051;AVGPOST=0.9973;RSQ=0.7993;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179442184 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9830;ERATE=0.0002;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179442227 . G GT 73 PASS INDEL;BAVGPOST=0.996;BRSQ=0.427;LDAF=0.0058;AVGPOST=0.9935;RSQ=0.5575;ERATE=0.0011;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179442228 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6975;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179442337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6010;AVGPOST=0.9977;RSQ=0.9963;ERATE=0.0005;THETA=0.0007;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 179442368 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.899;BRSQ=0.782;LDAF=0.7624;AVGPOST=0.9357;RSQ=0.8877;ERATE=0.0019;THETA=0.0004;AC=1680;AN=2184 GT:DS:GL:BD 0.76923078 1
1 179442401 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.5336;AVGPOST=0.9926;RSQ=0.9894;ERATE=0.0014;THETA=0.0004;AC=1167;AN=2184 GT:DS:GL:BD 0.53434068 1
1 179442428 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.513;LDAF=0.0048;AVGPOST=0.9952;RSQ=0.5772;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179442454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1070;AVGPOST=0.9937;RSQ=0.9743;ERATE=0.0005;THETA=0.0002;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 179442460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.4245;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179442478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.901;LDAF=0.5285;AVGPOST=0.9824;RSQ=0.9760;ERATE=0.0007;THETA=0.0009;AC=1162;AN=2184 GT:DS:GL:BD 0.53205127 1
1 179442482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0030;AVGPOST=0.9961;RSQ=0.4832;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179442499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.969;LDAF=0.1814;AVGPOST=0.9944;RSQ=0.9847;ERATE=0.0005;THETA=0.0004;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 179442529 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0051;AVGPOST=0.9975;RSQ=0.7934;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179442583 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179442589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7615;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179442633 . C CA 97 PASS INDEL;BAVGPOST=0.992;BRSQ=0.432;LDAF=0.0174;AVGPOST=0.9782;RSQ=0.5193;ERATE=0.0047;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179442700 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179442743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179442751 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3320;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=725;AN=2184 GT:DS:GL:BD 0.33195969 0
1 179442883 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.977;LDAF=0.5275;AVGPOST=0.9905;RSQ=0.9873;ERATE=0.0009;THETA=0.0019;AC=1153;AN=2184 GT:DS:GL:BD 0.52793038 1
1 179442917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3567;AVGPOST=0.9966;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 179442921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9261;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179443108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.925;LDAF=0.4979;AVGPOST=0.9654;RSQ=0.9568;ERATE=0.0005;THETA=0.0002;AC=1096;AN=2184 GT:DS:GL:BD 0.50183153 1
1 179443110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.919;LDAF=0.5660;AVGPOST=0.9662;RSQ=0.9544;ERATE=0.0007;THETA=0.0003;AC=1243;AN=2184 GT:DS:GL:BD 0.56913918 1
1 179443126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.789;LDAF=0.0103;AVGPOST=0.9980;RSQ=0.9310;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179443152 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.951;LDAF=0.5258;AVGPOST=0.9872;RSQ=0.9832;ERATE=0.0007;THETA=0.0005;AC=1152;AN=2184 GT:DS:GL:BD 0.52747256 1
1 179443188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.926;BRSQ=0.892;LDAF=0.4850;AVGPOST=0.9316;RSQ=0.9083;ERATE=0.0073;THETA=0.0009;AC=1080;AN=2184 GT:DS:GL:BD 0.49450549 0
1 179443215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.902;BRSQ=0.871;LDAF=0.5311;AVGPOST=0.9325;RSQ=0.9077;ERATE=0.0019;THETA=0.0004;AC=1186;AN=2184 GT:DS:GL:BD 0.54304028 1
1 179443220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.964;LDAF=0.0702;AVGPOST=0.9908;RSQ=0.9448;ERATE=0.0011;THETA=0.0003;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 179443228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.908;BRSQ=0.883;LDAF=0.4693;AVGPOST=0.9378;RSQ=0.9215;ERATE=0.0022;THETA=0.0002;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 179443241 . TC T 112 PASS INDEL;BAVGPOST=0.998;BRSQ=0.644;LDAF=0.0048;AVGPOST=0.9958;RSQ=0.6069;ERATE=0.0009;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179443390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.6004;AVGPOST=0.9936;RSQ=0.9893;ERATE=0.0008;THETA=0.0003;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 179443400 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0415;AVGPOST=0.9989;RSQ=0.9897;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179443418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4445;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179443443 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0412;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179443550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0651;AVGPOST=0.9995;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 179443616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179443652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9639;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179443722 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5366;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0004;THETA=0.0013;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179443725 . CT C 61 PASS INDEL;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.5603;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179443916 . GTGTAAGTAA G 2160 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9613;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179443937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6015;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 179443947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.8990;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179443989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179444019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179444023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0650;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 179444039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1501;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 179444085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179444177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5254;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179444181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0254;AVGPOST=0.9994;RSQ=0.9892;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179444319 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179444325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5367;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179444354 . C CA 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4606;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179444465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1798;AVGPOST=0.9985;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 179444549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6015;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0006;THETA=0.0005;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 179444560 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0146;AVGPOST=0.9995;RSQ=0.9852;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179444575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1465;AVGPOST=0.9983;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 179444577 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179444626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5377;AVGPOST=0.9977;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=1173;AN=2184 GT:DS:GL:BD 0.53708792 1
1 179444660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5363;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0004;THETA=0.0009;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179444723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179444743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6550;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179444785 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8382;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179444810 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0653;AVGPOST=0.9991;RSQ=0.9947;ERATE=0.0002;THETA=0.0025;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 179444811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.1454;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0025;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 179444949 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0412;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179444964 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3574;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0005;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 179444978 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0241;AVGPOST=0.9994;RSQ=0.9884;ERATE=0.0003;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179445025 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5367;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179445026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179445168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179445316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0657;AVGPOST=0.9979;RSQ=0.9881;ERATE=0.0006;THETA=0.0005;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 179445323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179445334 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9560;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179445348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179445387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8252;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179445435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0412;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179445467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5998;AVGPOST=0.9962;RSQ=0.9938;ERATE=0.0008;THETA=0.0004;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 179445515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5356;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0007;THETA=0.0004;AC=1170;AN=2184 GT:DS:GL:BD 0.53571427 1
1 179445542 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8554;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=1868;AN=2184 GT:DS:GL:BD 0.85531133 1
1 179445597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0003;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179445654 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5362;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0005;THETA=0.0002;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179445777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.1454;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 179445798 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4655;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179445820 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5370;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=1172;AN=2184 GT:DS:GL:BD 0.53663003 1
1 179445830 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179445903 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3573;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0002;THETA=0.0004;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 179445922 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5367;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0004;THETA=0.0005;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179445932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0188;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179446135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179446156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1793;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0004;THETA=0.0007;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 179446204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7858;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179446250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7045;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179446261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4142;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179446390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9997;RSQ=0.9938;ERATE=0.0003;THETA=0.0011;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179446396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6006;AVGPOST=0.9966;RSQ=0.9948;ERATE=0.0004;THETA=0.0002;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 179446440 rs78614537 CAT C 65043 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5376;AVGPOST=0.9960;RSQ=0.9940;ERATE=0.0011;THETA=0.0004;AC=1172;AN=2184 GT:DS:GL:BD 0.53663003 1
1 179446515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5368;AVGPOST=0.9970;RSQ=0.9960;ERATE=0.0007;THETA=0.0002;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179446545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0072;AVGPOST=0.9973;RSQ=0.8576;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179446553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.416;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5367;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179446579 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.5377;AVGPOST=0.9917;RSQ=0.9876;ERATE=0.0027;THETA=0.0004;AC=1175;AN=2184 GT:DS:GL:BD 0.53800368 1
1 179446705 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179446715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5630;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179446755 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.5997;AVGPOST=0.9958;RSQ=0.9930;ERATE=0.0007;THETA=0.0006;AC=1312;AN=2184 GT:DS:GL:BD 0.60073262 1
1 179446772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0145;AVGPOST=0.9994;RSQ=0.9806;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179446855 . AC A 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179446871 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6900;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179446883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.968;LDAF=0.5156;AVGPOST=0.9755;RSQ=0.9670;ERATE=0.0040;THETA=0.0005;AC=1136;AN=2184 GT:DS:GL:BD 0.52014655 1
1 179446964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.982;LDAF=0.5941;AVGPOST=0.9947;RSQ=0.9916;ERATE=0.0003;THETA=0.0005;AC=1297;AN=2184 GT:DS:GL:BD 0.59386444 1
1 179446987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.982;LDAF=0.5299;AVGPOST=0.9937;RSQ=0.9912;ERATE=0.0006;THETA=0.0007;AC=1158;AN=2184 GT:DS:GL:BD 0.53021979 1
1 179447015 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5361;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179447218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0652;AVGPOST=0.9991;RSQ=0.9940;ERATE=0.0002;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 179447246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5363;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179447257 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6652;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179447259 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0008;AVGPOST=0.9988;RSQ=0.3290;ERATE=0.0004;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179447297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6208;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179447347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5773;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0007;THETA=0.0003;AC=1261;AN=2184 GT:DS:GL:BD 0.57738096 1
1 179447434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179447445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4974;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179447620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0190;AVGPOST=0.9987;RSQ=0.9734;ERATE=0.0004;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179447630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0298;AVGPOST=0.9989;RSQ=0.9857;ERATE=0.0004;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179447632 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0650;AVGPOST=0.9991;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 179447651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1502;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 179447662 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.4516;ERATE=0.0007;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179447669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5367;AVGPOST=0.9935;RSQ=0.9909;ERATE=0.0011;THETA=0.0003;AC=1172;AN=2184 GT:DS:GL:BD 0.53663003 1
1 179447789 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5686;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179447829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0283;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0003;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179447889 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8148;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179447956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6012;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0006;THETA=0.0004;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 179447970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6345;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179448048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179448143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.737;LDAF=0.0090;AVGPOST=0.9931;RSQ=0.6982;ERATE=0.0008;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179448150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.984;LDAF=0.5329;AVGPOST=0.9914;RSQ=0.9880;ERATE=0.0006;THETA=0.0012;AC=1162;AN=2184 GT:DS:GL:BD 0.53205127 1
1 179448178 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0205;AVGPOST=0.9957;RSQ=0.9151;ERATE=0.0005;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179448200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.690;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8597;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179448220 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179448243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1509;AVGPOST=0.9958;RSQ=0.9873;ERATE=0.0006;THETA=0.0009;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 179448243 . AT A 319 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.8165;ERATE=0.0003;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179448282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.3014;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179448383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.559;LDAF=0.0050;AVGPOST=0.9951;RSQ=0.6223;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179448490 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.991;LDAF=0.5268;AVGPOST=0.9833;RSQ=0.9762;ERATE=0.0015;THETA=0.0006;AC=1156;AN=2184 GT:DS:GL:BD 0.52930403 1
1 179448568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179448631 . GGCT G 597 PASS INDEL;BAVGPOST=0.997;BRSQ=0.769;LDAF=0.0105;AVGPOST=0.9976;RSQ=0.8934;ERATE=0.0008;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179448673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.921;LDAF=0.0250;AVGPOST=0.9968;RSQ=0.9484;ERATE=0.0005;THETA=0.0010;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179448683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.880;LDAF=0.4807;AVGPOST=0.9100;RSQ=0.8720;ERATE=0.0132;THETA=0.0006;AC=1073;AN=2184 GT:DS:GL:BD 0.49130037 0
1 179448687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.964;LDAF=0.0693;AVGPOST=0.9951;RSQ=0.9684;ERATE=0.0006;THETA=0.0004;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 179448771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5062;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179448829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4610;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179448853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.965;LDAF=0.5347;AVGPOST=0.9931;RSQ=0.9905;ERATE=0.0007;THETA=0.0005;AC=1170;AN=2184 GT:DS:GL:BD 0.53571427 1
1 179448866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1056;AVGPOST=0.9964;RSQ=0.9849;ERATE=0.0008;THETA=0.0004;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 179448867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0239;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179448914 rs67204515 AAAAG A 14252 PASS INDEL;BAVGPOST=0.986;BRSQ=0.958;LDAF=0.1814;AVGPOST=0.9946;RSQ=0.9851;ERATE=0.0006;THETA=0.0007;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 179449058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5373;AVGPOST=0.9976;RSQ=0.9965;ERATE=0.0006;THETA=0.0003;AC=1173;AN=2184 GT:DS:GL:BD 0.53708792 1
1 179449079 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3575;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 179449173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5365;AVGPOST=0.9988;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179449192 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.863;LDAF=0.0156;AVGPOST=0.9963;RSQ=0.9210;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179449204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5265;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179449214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1791;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 179449221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.6881;ERATE=0.0008;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179449247 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8542;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179449271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5367;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179449300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0103;AVGPOST=0.9987;RSQ=0.9562;ERATE=0.0002;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179449389 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.5981;AVGPOST=0.9897;RSQ=0.9844;ERATE=0.0036;THETA=0.0005;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 179449416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.966;LDAF=0.5305;AVGPOST=0.9943;RSQ=0.9915;ERATE=0.0005;THETA=0.0007;AC=1159;AN=2184 GT:DS:GL:BD 0.53067768 1
1 179449606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0034;AVGPOST=0.9952;RSQ=0.4669;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179449740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8578;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179449764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8273;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179449776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9267;ERATE=0.0003;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179449859 . A AC 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0023;AVGPOST=0.9964;RSQ=0.3613;ERATE=0.0008;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179449882 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.5364;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0005;THETA=0.0007;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179449990 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0655;AVGPOST=0.9967;RSQ=0.9819;ERATE=0.0005;THETA=0.0005;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 179450042 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0124;AVGPOST=0.9961;RSQ=0.8947;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179450046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.3924;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179450058 . TTTTA T 23758 PASS INDEL;BAVGPOST=0.968;BRSQ=0.936;LDAF=0.3906;AVGPOST=0.9747;RSQ=0.9563;ERATE=0.0023;THETA=0.0002;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 179450084 . AAAAT A 214 PASS INDEL;BAVGPOST=0.998;BRSQ=0.557;LDAF=0.0099;AVGPOST=0.9890;RSQ=0.5701;ERATE=0.0011;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179450234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.834;LDAF=0.8584;AVGPOST=0.9720;RSQ=0.9119;ERATE=0.0021;THETA=0.0005;AC=1897;AN=2184 GT:DS:GL:BD 0.86858976 1
1 179450256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.1790;AVGPOST=0.9986;RSQ=0.9960;ERATE=0.0004;THETA=0.0014;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 179450315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0713;AVGPOST=0.9957;RSQ=0.9744;ERATE=0.0005;THETA=0.0002;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 179450365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8407;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179450374 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3585;AVGPOST=0.9942;RSQ=0.9908;ERATE=0.0005;THETA=0.0003;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 179450387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.910;LDAF=0.0324;AVGPOST=0.9916;RSQ=0.8998;ERATE=0.0009;THETA=0.0002;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179450461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.856;BRSQ=0.736;LDAF=0.3274;AVGPOST=0.8863;RSQ=0.8264;ERATE=0.0064;THETA=0.0002;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 179450581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0229;AVGPOST=0.9976;RSQ=0.9603;ERATE=0.0004;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 179450591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3557;AVGPOST=0.9950;RSQ=0.9918;ERATE=0.0013;THETA=0.0003;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 179450600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0647;AVGPOST=0.9979;RSQ=0.9876;ERATE=0.0009;THETA=0.0002;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 179450604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9625;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179450718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.549;LDAF=0.0062;AVGPOST=0.9954;RSQ=0.6890;ERATE=0.0009;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179450752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0276;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179450913 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6002;AVGPOST=0.9970;RSQ=0.9951;ERATE=0.0005;THETA=0.0012;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 179450950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0045;AVGPOST=0.9996;RSQ=0.9649;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179450970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179450972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.8562;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=1869;AN=2184 GT:DS:GL:BD 0.85576922 1
1 179451033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179451089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7079;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179451101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7136;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179451124 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1035;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 179451314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0245;AVGPOST=0.9993;RSQ=0.9893;ERATE=0.0002;THETA=0.0048;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179451316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5825;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0007;THETA=0.0002;AC=1272;AN=2184 GT:DS:GL:BD 0.58241761 1
1 179451366 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5366;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0004;THETA=0.0009;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179451406 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179451439 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5367;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0005;THETA=0.0002;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179451445 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5218;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179451471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0066;AVGPOST=0.9958;RSQ=0.7746;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179451744 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0119;AVGPOST=0.9986;RSQ=0.9449;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179451775 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0650;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 179451793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0649;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0002;THETA=0.0005;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 179451836 . T TA 1379 PASS INDEL;BAVGPOST=0.994;BRSQ=0.787;LDAF=0.0112;AVGPOST=0.9989;RSQ=0.9539;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179451866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0650;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 179451873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7048;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=1539;AN=2184 GT:DS:GL:BD 0.70467031 1
1 179451944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5365;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0002;THETA=0.0001;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179452024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179452194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5365;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179452275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1792;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0002;THETA=0.0001;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 179452381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0649;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 179452432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179452492 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179452495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9996;RSQ=0.9476;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179452520 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1033;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0002;THETA=0.0005;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 179452522 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.5367;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179452610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0061;AVGPOST=0.9993;RSQ=0.9551;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179452634 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179452695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5361;AVGPOST=0.9987;RSQ=0.9983;ERATE=0.0003;THETA=0.0014;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179452715 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9860;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179452758 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3576;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 179452799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5365;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179452827 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5607;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179452858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1498;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 179453019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179453049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0048;AVGPOST=0.9979;RSQ=0.8230;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179453178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.9972;AVGPOST=0.9996;RSQ=0.9398;ERATE=0.0003;THETA=0.0002;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 179453198 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1801;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 179453230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5503;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=1201;AN=2184 GT:DS:GL:BD 0.54990840 1
1 179453239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8554;AVGPOST=0.9987;RSQ=0.9957;ERATE=0.0004;THETA=0.0008;AC=1868;AN=2184 GT:DS:GL:BD 0.85531133 1
1 179453264 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0202;AVGPOST=0.9995;RSQ=0.9895;ERATE=0.0002;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 179453272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5353;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0005;THETA=0.0008;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 179453292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9231;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179453293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9034;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179453321 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.6052;AVGPOST=0.9951;RSQ=0.9922;ERATE=0.0013;THETA=0.0004;AC=1320;AN=2184 GT:DS:GL:BD 0.60439563 1
1 179453330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.961;LDAF=0.1767;AVGPOST=0.9901;RSQ=0.9744;ERATE=0.0011;THETA=0.0003;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 179453371 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179453424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3982;AVGPOST=0.9883;RSQ=0.9809;ERATE=0.0038;THETA=0.0003;AC=865;AN=2184 GT:DS:GL:BD 0.39606228 0
1 179453498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8554;AVGPOST=0.9988;RSQ=0.9958;ERATE=0.0004;THETA=0.0002;AC=1869;AN=2184 GT:DS:GL:BD 0.85576922 1
1 179453514 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.893;LDAF=0.0736;AVGPOST=0.9899;RSQ=0.9487;ERATE=0.0005;THETA=0.0022;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 179453568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179453667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5363;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179453820 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1795;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 179453824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1034;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0002;THETA=0.0002;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 179453826 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179453860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6649;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179453938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179453957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5792;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179453965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5369;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0005;THETA=0.0002;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179453992 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6023;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0007;THETA=0.0002;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 179454009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6366;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179454047 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1792;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 179454136 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0089;AVGPOST=0.9984;RSQ=0.9364;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179454213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.7172;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179454227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5368;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179454326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5365;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0004;THETA=0.0002;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179454370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1792;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0002;THETA=0.0004;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 179454371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8639;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179454379 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0659;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 179454389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179454544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5368;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0004;THETA=0.0003;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179454609 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179454674 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9233;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179454686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179454716 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179454751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5367;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0005;THETA=0.0004;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179454829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179454859 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.3321;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=725;AN=2184 GT:DS:GL:BD 0.33195969 0
1 179454882 rs35232924 A AAG 78036 PASS INDEL;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.5987;AVGPOST=0.9930;RSQ=0.9889;ERATE=0.0015;THETA=0.0008;AC=1309;AN=2184 GT:DS:GL:BD 0.59935898 1
1 179454915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0247;AVGPOST=0.9990;RSQ=0.9841;ERATE=0.0002;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179455039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6197;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179455097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4538;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179455110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.933;LDAF=0.5985;AVGPOST=0.9896;RSQ=0.9830;ERATE=0.0009;THETA=0.0007;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 179455124 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0043;AVGPOST=0.9981;RSQ=0.8109;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179455186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.965;LDAF=0.1548;AVGPOST=0.9949;RSQ=0.9842;ERATE=0.0012;THETA=0.0002;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 179455231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1790;AVGPOST=0.9985;RSQ=0.9955;ERATE=0.0006;THETA=0.0004;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 179455254 . C CA 962 PASS INDEL;BAVGPOST=0.583;BRSQ=0.236;LDAF=0.5644;AVGPOST=0.6879;RSQ=0.4623;ERATE=0.0292;THETA=0.0007;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 179455265 . A AAAC 1036 PASS INDEL;BAVGPOST=0.997;BRSQ=0.938;LDAF=0.0263;AVGPOST=0.9936;RSQ=0.9018;ERATE=0.0007;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179455360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.967;LDAF=0.0657;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 179455364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5368;AVGPOST=0.9974;RSQ=0.9963;ERATE=0.0005;THETA=0.0004;AC=1172;AN=2184 GT:DS:GL:BD 0.53663003 1
1 179455413 rs71114523 T TAAAG 62320 PASS INDEL;BAVGPOST=0.934;BRSQ=0.901;LDAF=0.4901;AVGPOST=0.9288;RSQ=0.9109;ERATE=0.0114;THETA=0.0002;AC=1084;AN=2184 GT:DS:GL:BD 0.49633700 0
1 179455594 MERGED_DEL_2_6440 AAATTCAGGAAATGCAGAGAGCCCCTGAAAAATACTACAAAATAAGACCATACATGAGACACATAGTCATCAGATTCTCCAAGGTTGAAATGAAAGAAAAAATGTTAAAGGCAGGTAGAGAGAAGGGGCAGGTCACCTGCAAAGCAAACTCCATAAGGCTAACAGCAGACATGTCAGCAGAAATCCTACA A . . SV;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0662;AVGPOST=0.9991;RSQ=0.9934;ERATE=0.0005;THETA=0.0188;CIEND=-179,191;CIPOS=-249,122;END=179458296;HOMLEN=4;HOMSEQ=AATT;SOURCE=AssembledBreakpoints_1794 GT:DS:GL:BD 0.06593407 0
1 179455645 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5617;AVGPOST=0.9958;RSQ=0.9941;ERATE=0.0003;THETA=0.0005;AC=1226;AN=2184 GT:DS:GL:BD 0.56135529 1
1 179455716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7515;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179455768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179455769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5617;AVGPOST=0.9958;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=1226;AN=2184 GT:DS:GL:BD 0.56135529 1
1 179455775 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3734;AVGPOST=0.9947;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 179455815 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8424;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179455837 . AC A 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6230;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179456076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.883;LDAF=0.0311;AVGPOST=0.9964;RSQ=0.9530;ERATE=0.0008;THETA=0.0002;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 179456093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0114;AVGPOST=0.9994;RSQ=0.9723;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179456134 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179456190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1507;AVGPOST=0.9941;RSQ=0.9841;ERATE=0.0004;THETA=0.0007;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 179456221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8246;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179456239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179456286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0035;AVGPOST=0.9977;RSQ=0.7236;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179456313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8410;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179456394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179456462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5614;AVGPOST=0.9937;RSQ=0.9913;ERATE=0.0010;THETA=0.0008;AC=1226;AN=2184 GT:DS:GL:BD 0.56135529 1
1 179456531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5616;AVGPOST=0.9955;RSQ=0.9936;ERATE=0.0007;THETA=0.0026;AC=1226;AN=2184 GT:DS:GL:BD 0.56135529 1
1 179456634 . A AC 57538 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5628;AVGPOST=0.9939;RSQ=0.9908;ERATE=0.0009;THETA=0.0013;AC=1228;AN=2184 GT:DS:GL:BD 0.56227106 1
1 179456653 . TAATTGCAGGTTTA T 92720 PASS INDEL;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5612;AVGPOST=0.9937;RSQ=0.9907;ERATE=0.0006;THETA=0.0006;AC=1226;AN=2184 GT:DS:GL:BD 0.56135529 1
1 179456736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5736;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179456790 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0226;AVGPOST=0.9975;RSQ=0.9639;ERATE=0.0003;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 179456812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.967;LDAF=0.5395;AVGPOST=0.9803;RSQ=0.9748;ERATE=0.0005;THETA=0.0002;AC=1181;AN=2184 GT:DS:GL:BD 0.54075092 1
1 179456813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.923;LDAF=0.8185;AVGPOST=0.9761;RSQ=0.9490;ERATE=0.0012;THETA=0.0002;AC=1789;AN=2184 GT:DS:GL:BD 0.81913918 1
1 179456839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1875;AVGPOST=0.9949;RSQ=0.9881;ERATE=0.0005;THETA=0.0008;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 179456987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.5630;AVGPOST=0.9954;RSQ=0.9934;ERATE=0.0007;THETA=0.0005;AC=1229;AN=2184 GT:DS:GL:BD 0.56272894 1
1 179457194 . TA T 18265 PASS INDEL;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.5565;AVGPOST=0.9822;RSQ=0.9765;ERATE=0.0023;THETA=0.0003;AC=1219;AN=2184 GT:DS:GL:BD 0.55815017 1
1 179457202 . CTA C 2783 PASS INDEL;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0213;AVGPOST=0.9967;RSQ=0.9424;ERATE=0.0005;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179457254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.965;LDAF=0.1103;AVGPOST=0.9925;RSQ=0.9751;ERATE=0.0004;THETA=0.0005;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 179457276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5618;AVGPOST=0.9965;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 179457317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0041;AVGPOST=0.9972;RSQ=0.7718;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179457338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0023;AVGPOST=0.9971;RSQ=0.5307;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179457465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5612;AVGPOST=0.9955;RSQ=0.9941;ERATE=0.0004;THETA=0.0003;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 179457551 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5621;AVGPOST=0.9966;RSQ=0.9949;ERATE=0.0006;THETA=0.0005;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 179457555 . TTTTG T 1460 PASS INDEL;BAVGPOST=0.996;BRSQ=0.917;LDAF=0.0328;AVGPOST=0.9882;RSQ=0.8685;ERATE=0.0013;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 179457568 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6171;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179457640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.962;LDAF=0.1115;AVGPOST=0.9928;RSQ=0.9763;ERATE=0.0003;THETA=0.0005;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 179457753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.895;BRSQ=0.583;LDAF=0.1858;AVGPOST=0.8561;RSQ=0.5878;ERATE=0.0453;THETA=0.0005;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 179457782 . CTT C 133 PASS INDEL;BAVGPOST=0.933;BRSQ=0.351;LDAF=0.0979;AVGPOST=0.8782;RSQ=0.4566;ERATE=0.0133;THETA=0.0006;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 179457788 . T TTC 682 PASS INDEL;BAVGPOST=0.911;BRSQ=0.421;LDAF=0.1162;AVGPOST=0.8834;RSQ=0.5652;ERATE=0.0097;THETA=0.0003;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 179457800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.342;LDAF=0.0098;AVGPOST=0.9847;RSQ=0.3598;ERATE=0.0012;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179457831 . TTTCC T 18 PASS INDEL;BAVGPOST=0.992;BRSQ=0.449;LDAF=0.0126;AVGPOST=0.9846;RSQ=0.5115;ERATE=0.0022;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179457843 . GTCTCTCTCTCTCTTTCTT G 14792 PASS INDEL;BAVGPOST=0.948;BRSQ=0.793;LDAF=0.1371;AVGPOST=0.9768;RSQ=0.9288;ERATE=0.0007;THETA=0.0004;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 179457883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0263;AVGPOST=0.9964;RSQ=0.9485;ERATE=0.0005;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179457965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.966;LDAF=0.5534;AVGPOST=0.9666;RSQ=0.9555;ERATE=0.0046;THETA=0.0005;AC=1213;AN=2184 GT:DS:GL:BD 0.55540293 1
1 179458015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4583;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179458034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.957;LDAF=0.5489;AVGPOST=0.9835;RSQ=0.9776;ERATE=0.0008;THETA=0.0003;AC=1204;AN=2184 GT:DS:GL:BD 0.55128205 1
1 179458060 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.949;LDAF=0.3593;AVGPOST=0.9771;RSQ=0.9651;ERATE=0.0015;THETA=0.0002;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 179458078 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6647;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179458105 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5375;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179458119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.942;LDAF=0.5480;AVGPOST=0.9720;RSQ=0.9646;ERATE=0.0014;THETA=0.0004;AC=1200;AN=2184 GT:DS:GL:BD 0.54945058 1
1 179458163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5646;AVGPOST=0.9844;RSQ=0.9789;ERATE=0.0016;THETA=0.0068;AC=1233;AN=2184 GT:DS:GL:BD 0.56456041 1
1 179458176 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6983;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179458334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.973;LDAF=0.5856;AVGPOST=0.9825;RSQ=0.9744;ERATE=0.0007;THETA=0.0113;AC=1278;AN=2184 GT:DS:GL:BD 0.58516484 1
1 179458426 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8341;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179458472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1507;AVGPOST=0.9951;RSQ=0.9866;ERATE=0.0003;THETA=0.0002;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 179458584 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8565;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179458609 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5204;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179458648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6027;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0005;THETA=0.0003;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 179458750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4827;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179458821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6026;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 179458846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0141;AVGPOST=0.9992;RSQ=0.9803;ERATE=0.0002;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179458934 rs5779026 GC G 20854 PASS INDEL;BAVGPOST=0.966;BRSQ=0.942;LDAF=0.5123;AVGPOST=0.9012;RSQ=0.8683;ERATE=0.0110;THETA=0.0003;AC=1144;AN=2184 GT:DS:GL:BD 0.52380955 1
1 179459030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8703;ERATE=0.0004;THETA=0.0031;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179459035 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.975;LDAF=0.8722;AVGPOST=0.9946;RSQ=0.9784;ERATE=0.0007;THETA=0.0005;AC=1909;AN=2184 GT:DS:GL:BD 0.87408423 1
1 179459040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0676;AVGPOST=0.9963;RSQ=0.9785;ERATE=0.0004;THETA=0.0005;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 179459122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.970;LDAF=0.5975;AVGPOST=0.9927;RSQ=0.9887;ERATE=0.0006;THETA=0.0003;AC=1305;AN=2184 GT:DS:GL:BD 0.59752744 1
1 179459247 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8034;ERATE=0.0004;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179459316 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179459329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179459386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0247;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0002;THETA=0.0002;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179459460 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7044;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0006;THETA=0.0007;AC=1539;AN=2184 GT:DS:GL:BD 0.70467031 1
1 179459476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9191;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179459485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1026;AVGPOST=0.9989;RSQ=0.9945;ERATE=0.0003;THETA=0.0002;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 179459511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9551;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179459541 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7706;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179459554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3323;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=725;AN=2184 GT:DS:GL:BD 0.33195969 0
1 179459574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179459584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0274;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0002;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179459676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5364;AVGPOST=0.9989;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=1170;AN=2184 GT:DS:GL:BD 0.53571427 1
1 179459720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.5346;AVGPOST=0.9968;RSQ=0.9955;ERATE=0.0004;THETA=0.0022;AC=1167;AN=2184 GT:DS:GL:BD 0.53434068 1
1 179459725 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.5354;AVGPOST=0.9982;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 179459730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179459758 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0035;AVGPOST=0.9970;RSQ=0.6878;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179459850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6446;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179459900 . T TTG 1655 PASS INDEL;BAVGPOST=0.971;BRSQ=0.505;LDAF=0.0307;AVGPOST=0.9699;RSQ=0.6116;ERATE=0.0032;THETA=0.0013;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179459901 . T TG 450 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9670;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179460067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179460074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0659;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0002;THETA=0.0003;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 179460079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0047;AVGPOST=0.9978;RSQ=0.8222;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179460117 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0252;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0002;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179460125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5365;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179460131 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0196;AVGPOST=0.9991;RSQ=0.9809;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 179460149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7140;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179460196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5087;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179460219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5348;AVGPOST=0.9944;RSQ=0.9922;ERATE=0.0012;THETA=0.0011;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 179460322 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179460436 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0192;AVGPOST=0.9995;RSQ=0.9894;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179460524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0412;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0002;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179460766 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179460778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179460806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0279;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179460807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179460918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179460979 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0658;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 179461004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0247;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0002;THETA=0.0001;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179461027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3574;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0003;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 179461064 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179461067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179461116 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0247;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0002;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179461123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0411;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179461144 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179461158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6024;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0002;THETA=0.0003;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 179461189 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7755;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179461212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6024;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0004;THETA=0.0004;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 179461296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8699;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179461371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5298;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179461409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0276;AVGPOST=0.9996;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179461447 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1476;AVGPOST=0.9959;RSQ=0.9897;ERATE=0.0005;THETA=0.0020;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 179461459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0659;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 179461496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0199;AVGPOST=0.9991;RSQ=0.9826;ERATE=0.0004;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 179461528 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7410;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179461573 . G GA 2318 PASS INDEL;BAVGPOST=0.734;BRSQ=0.574;LDAF=0.4574;AVGPOST=0.7451;RSQ=0.6302;ERATE=0.0437;THETA=0.0002;AC=1048;AN=2184 GT:DS:GL:BD 0.47985348 0
1 179461582 . AAACAAC A 29781 PASS INDEL;BAVGPOST=0.958;BRSQ=0.923;LDAF=0.5606;AVGPOST=0.9202;RSQ=0.8794;ERATE=0.0191;THETA=0.0006;AC=1252;AN=2184 GT:DS:GL:BD 0.57326007 1
1 179461671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8562;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0002;THETA=0.0004;AC=1870;AN=2184 GT:DS:GL:BD 0.85622710 1
1 179461758 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1022;AVGPOST=0.9988;RSQ=0.9956;ERATE=0.0002;THETA=0.0003;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 179461779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0210;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0002;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179461782 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1022;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0002;THETA=0.0004;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 179461894 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0665;AVGPOST=0.9990;RSQ=0.9940;ERATE=0.0004;THETA=0.0002;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 179461945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0274;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179461968 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0247;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0002;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179461975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1024;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 179461977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0173;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0002;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179461987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179462056 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179462067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179462099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179462149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9972;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0007;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 179462219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1019;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 179462339 . C CTAT 49430 PASS INDEL;BAVGPOST=0.976;BRSQ=0.947;LDAF=0.7025;AVGPOST=0.9544;RSQ=0.9183;ERATE=0.0110;THETA=0.0010;AC=1552;AN=2184 GT:DS:GL:BD 0.71062273 1
1 179462349 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.976;LDAF=0.3501;AVGPOST=0.9913;RSQ=0.9869;ERATE=0.0003;THETA=0.0002;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 179462414 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5235;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179462473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1458;AVGPOST=0.9991;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 179462561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7974;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179462667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0658;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 179462708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5687;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179462801 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.6879;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0004;THETA=0.0002;AC=1501;AN=2184 GT:DS:GL:BD 0.68727106 1
1 179462817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7924;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179462866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8533;AVGPOST=0.9981;RSQ=0.9943;ERATE=0.0007;THETA=0.0003;AC=1864;AN=2184 GT:DS:GL:BD 0.85347986 1
1 179462954 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6868;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0004;THETA=0.0004;AC=1499;AN=2184 GT:DS:GL:BD 0.68635529 1
1 179462956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0090;AVGPOST=0.9986;RSQ=0.9499;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179463019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6578;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179463079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6340;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179463313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0413;AVGPOST=0.9995;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179463329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8359;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179463333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.706;LDAF=0.0121;AVGPOST=0.9924;RSQ=0.7541;ERATE=0.0005;THETA=0.0014;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179463499 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8995;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179463503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0083;AVGPOST=0.9991;RSQ=0.9576;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179463514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179463591 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179463635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3315;AVGPOST=0.9978;RSQ=0.9957;ERATE=0.0006;THETA=0.0004;AC=724;AN=2184 GT:DS:GL:BD 0.33150184 0
1 179463925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1024;AVGPOST=0.9987;RSQ=0.9937;ERATE=0.0004;THETA=0.0006;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 179464217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5742;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179464218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9462;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179464232 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6871;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0007;THETA=0.0006;AC=1499;AN=2184 GT:DS:GL:BD 0.68635529 1
1 179464557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3572;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0005;THETA=0.0006;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 179464585 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7518;AVGPOST=0.9980;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=1643;AN=2184 GT:DS:GL:BD 0.75228935 1
1 179464600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179464782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179464911 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0659;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0009;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 179464920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0251;AVGPOST=0.9991;RSQ=0.9863;ERATE=0.0002;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179464922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7455;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179464964 . G GT 67 PASS INDEL;BAVGPOST=0.998;BRSQ=0.717;LDAF=0.0045;AVGPOST=0.9954;RSQ=0.6172;ERATE=0.0005;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179465087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179465129 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8677;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179465212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7524;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0004;THETA=0.0008;AC=1643;AN=2184 GT:DS:GL:BD 0.75228935 1
1 179465223 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0415;AVGPOST=0.9991;RSQ=0.9897;ERATE=0.0005;THETA=0.0012;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179465226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.777;LDAF=0.0066;AVGPOST=0.9977;RSQ=0.8692;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179465292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1024;AVGPOST=0.9988;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 179465339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.372;LDAF=0.0027;AVGPOST=0.9953;RSQ=0.3013;ERATE=0.0012;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179465353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7074;ERATE=0.0006;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179465490 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4517;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179465494 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0002;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179465508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8187;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179465516 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7915;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179465541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0665;AVGPOST=0.9985;RSQ=0.9921;ERATE=0.0003;THETA=0.0011;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 179465673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5324;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179465674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1505;AVGPOST=0.9985;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 179465675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0082;AVGPOST=0.9989;RSQ=0.9549;ERATE=0.0003;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179465765 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8806;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179465778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9631;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179465821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0063;AVGPOST=0.9986;RSQ=0.9046;ERATE=0.0004;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179465828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7706;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179465851 . AT A 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7348;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179465965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7571;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179465983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179465985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179466114 . G GC 15 PASS INDEL;BAVGPOST=0.999;BRSQ=0.515;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6132;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179466174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.6569;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179466320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179466380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6874;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=1500;AN=2184 GT:DS:GL:BD 0.68681318 1
1 179466385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8551;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=1867;AN=2184 GT:DS:GL:BD 0.85485345 1
1 179466508 . T TG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7233;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179466577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0276;AVGPOST=0.9996;RSQ=0.9933;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179466624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3580;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=781;AN=2184 GT:DS:GL:BD 0.35760072 0
1 179466667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9404;ERATE=0.0003;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179466685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179466706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4225;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179466889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0412;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0002;THETA=0.0004;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179467038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0263;AVGPOST=0.9985;RSQ=0.9817;ERATE=0.0004;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179467042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9739;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179467100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7375;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179467106 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179467237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0054;AVGPOST=0.9977;RSQ=0.8385;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179467415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0096;AVGPOST=0.9977;RSQ=0.9024;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179467434 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6359;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179467477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0073;AVGPOST=0.9971;RSQ=0.8468;ERATE=0.0005;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179467725 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9625;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179467736 . A AC 69 PASS INDEL;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8182;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179467757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179467826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7218;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179467838 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0155;AVGPOST=0.9981;RSQ=0.9538;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179467921 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7293;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0027;AC=1592;AN=2184 GT:DS:GL:BD 0.72893775 1
1 179468007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1455;AVGPOST=0.9985;RSQ=0.9950;ERATE=0.0004;THETA=0.0006;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 179468017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.8014;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179468149 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8809;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0003;THETA=0.0010;AC=1924;AN=2184 GT:DS:GL:BD 0.88095236 1
1 179468214 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9971;AVGPOST=0.9997;RSQ=0.9465;ERATE=0.0002;THETA=0.0003;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 179468238 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179468255 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1272;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0002;THETA=0.0002;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 179468318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8234;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179468339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179468344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6305;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179468362 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5678;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179468392 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179468445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8811;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0007;AC=1924;AN=2184 GT:DS:GL:BD 0.88095236 1
1 179468546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179468573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8590;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179468619 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.6748;AVGPOST=0.9729;RSQ=0.9605;ERATE=0.0032;THETA=0.0003;AC=1488;AN=2184 GT:DS:GL:BD 0.68131870 1
1 179468845 . CT C 119 PASS INDEL;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0039;AVGPOST=0.9980;RSQ=0.7925;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179468856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0262;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0003;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179469016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1285;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 179469130 . TAATA T 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4828;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179469213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0277;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0003;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179469253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7890;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179469279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5466;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179469314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1546;AVGPOST=0.9994;RSQ=0.9980;ERATE=0.0003;THETA=0.0008;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 179469320 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0402;AVGPOST=0.9989;RSQ=0.9889;ERATE=0.0003;THETA=0.0006;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 179469360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5967;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179469431 . ATATG A 198 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0085;AVGPOST=0.9969;RSQ=0.8537;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179469435 . GTA G 353 PASS INDEL;BAVGPOST=0.965;BRSQ=0.468;LDAF=0.0758;AVGPOST=0.8988;RSQ=0.4413;ERATE=0.0147;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 179469474 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.677;LDAF=0.0167;AVGPOST=0.9854;RSQ=0.6539;ERATE=0.0005;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179469632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7275;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=1588;AN=2184 GT:DS:GL:BD 0.72710621 1
1 179469688 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179469741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7286;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=1590;AN=2184 GT:DS:GL:BD 0.72802198 1
1 179469747 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.935;LDAF=0.1743;AVGPOST=0.9914;RSQ=0.9753;ERATE=0.0004;THETA=0.0004;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 179469754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.696;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8074;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179469827 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6979;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179469855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3260;AVGPOST=0.9961;RSQ=0.9929;ERATE=0.0004;THETA=0.0003;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 179469939 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8175;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179469976 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.4444;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179470022 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0412;AVGPOST=0.9980;RSQ=0.9788;ERATE=0.0004;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 179470081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179470096 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5543;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179470149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179470240 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4530;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179470263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9390;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179470357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1547;AVGPOST=0.9992;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 179470386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5578;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179470433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179470537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7677;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179470584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0405;AVGPOST=0.9994;RSQ=0.9933;ERATE=0.0003;THETA=0.0032;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 179470587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4035;ERATE=0.0006;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179470618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1457;AVGPOST=0.9947;RSQ=0.9831;ERATE=0.0005;THETA=0.0006;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 179470671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0061;AVGPOST=0.9983;RSQ=0.8776;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179470779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.797;LDAF=0.0053;AVGPOST=0.9964;RSQ=0.7610;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179470802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0108;AVGPOST=0.9977;RSQ=0.9064;ERATE=0.0003;THETA=0.0053;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179470859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6878;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179470877 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.6454;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179470926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0127;AVGPOST=0.9977;RSQ=0.9302;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179471183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.3296;AVGPOST=0.9949;RSQ=0.9911;ERATE=0.0010;THETA=0.0003;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 179471422 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179471485 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.8778;AVGPOST=0.9892;RSQ=0.9655;ERATE=0.0012;THETA=0.0002;AC=1923;AN=2184 GT:DS:GL:BD 0.88049453 1
1 179471518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5424;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179471533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3607;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=787;AN=2184 GT:DS:GL:BD 0.36034799 0
1 179471557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8617;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179471574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7255;AVGPOST=0.9943;RSQ=0.9900;ERATE=0.0007;THETA=0.0004;AC=1587;AN=2184 GT:DS:GL:BD 0.72664833 1
1 179471575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0197;AVGPOST=0.9988;RSQ=0.9741;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179471648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8802;AVGPOST=0.9931;RSQ=0.9757;ERATE=0.0008;THETA=0.0003;AC=1924;AN=2184 GT:DS:GL:BD 0.88095236 1
1 179471663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0039;AVGPOST=0.9993;RSQ=0.9115;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179471709 . A AAAG 753 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0113;AVGPOST=0.9986;RSQ=0.9515;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179471750 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6872;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0008;THETA=0.0002;AC=1501;AN=2184 GT:DS:GL:BD 0.68727106 1
1 179471761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7278;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0006;THETA=0.0003;AC=1589;AN=2184 GT:DS:GL:BD 0.72756410 1
1 179471832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179471869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0113;AVGPOST=0.9995;RSQ=0.9804;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179471911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8197;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179471957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3276;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0005;THETA=0.0013;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 179471978 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8441;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179472059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8234;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179472091 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0012;AVGPOST=0.9981;RSQ=0.2856;ERATE=0.0005;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179472288 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7491;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179472406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179472508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4452;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179472528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8058;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179472532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3274;AVGPOST=0.9971;RSQ=0.9942;ERATE=0.0006;THETA=0.0002;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 179472549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9973;RSQ=0.9425;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179472552 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0064;AVGPOST=0.9964;RSQ=0.8048;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179472574 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.578;LDAF=0.0066;AVGPOST=0.9937;RSQ=0.6459;ERATE=0.0009;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179472678 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.667;LDAF=0.0038;AVGPOST=0.9963;RSQ=0.5786;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179472690 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0025;AVGPOST=0.9972;RSQ=0.5332;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179472696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8472;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179472699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.921;LDAF=0.8858;AVGPOST=0.9793;RSQ=0.9267;ERATE=0.0022;THETA=0.0005;AC=1945;AN=2184 GT:DS:GL:BD 0.89056778 1
1 179472752 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0253;AVGPOST=0.9997;RSQ=0.9945;ERATE=0.0002;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179472838 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9994;RSQ=0.9753;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179472856 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9978;RSQ=0.8418;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179472912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.970;LDAF=0.3205;AVGPOST=0.9871;RSQ=0.9784;ERATE=0.0008;THETA=0.0004;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 179472996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0403;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0002;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 179473203 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9282;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179473273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.906;LDAF=0.0284;AVGPOST=0.9958;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179473404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179473417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8059;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179473452 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.7200;AVGPOST=0.9945;RSQ=0.9918;ERATE=0.0004;THETA=0.0003;AC=1570;AN=2184 GT:DS:GL:BD 0.71886444 1
1 179473513 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3258;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 179473563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3354;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 179473588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179473596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7199;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179473648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179473654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179473704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0832;AVGPOST=0.9990;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 179473724 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0002;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179473809 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8254;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179473917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1285;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 179473918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3601;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0001;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 179474016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7791;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179474053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.8821;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=1926;AN=2184 GT:DS:GL:BD 0.88186812 1
1 179474090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7798;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179474125 . A AG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179474248 rs78819305 CT C 38486 PASS INDEL;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3609;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 179474444 rs72501162 C CT 36791 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8798;AVGPOST=0.9958;RSQ=0.9865;ERATE=0.0009;THETA=0.0002;AC=1925;AN=2184 GT:DS:GL:BD 0.88141024 1
1 179474509 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179474527 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7359;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179474528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7568;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179474654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179474727 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3277;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0006;THETA=0.0005;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 179474732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1287;AVGPOST=0.9977;RSQ=0.9914;ERATE=0.0005;THETA=0.0004;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 179474962 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6983;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179475003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3271;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 179475112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179475206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7495;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179475246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179475257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179475259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179475274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0253;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0002;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179475282 . A AT 70 PASS INDEL;BAVGPOST=0.981;BRSQ=0.443;LDAF=0.0298;AVGPOST=0.9618;RSQ=0.4953;ERATE=0.0083;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 179475462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0275;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0002;THETA=0.0018;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179475551 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7495;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179475644 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9518;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179475758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179475813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6613;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179475826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.8938;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179475853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6664;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179475888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7332;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179475929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7942;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179475964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0403;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0002;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 179475980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179476074 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4987;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179476185 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179476194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6768;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179476283 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0081;AVGPOST=0.9982;RSQ=0.9122;ERATE=0.0003;THETA=0.0027;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179476507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1493;AVGPOST=0.9984;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 179476746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3605;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0005;THETA=0.0004;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 179476763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0814;AVGPOST=0.9977;RSQ=0.9884;ERATE=0.0004;THETA=0.0002;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 179476791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8821;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=1926;AN=2184 GT:DS:GL:BD 0.88186812 1
1 179477137 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1283;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0002;THETA=0.0002;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 179477230 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3273;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0005;THETA=0.0039;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 179477404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3270;AVGPOST=0.9972;RSQ=0.9954;ERATE=0.0007;THETA=0.0004;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 179477439 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0123;AVGPOST=0.9953;RSQ=0.8458;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179477543 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9588;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179477591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1289;AVGPOST=0.9986;RSQ=0.9948;ERATE=0.0004;THETA=0.0018;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 179477619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8954;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179477644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.7353;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179477725 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0049;AVGPOST=0.9964;RSQ=0.7414;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179477813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9074;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179477903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179477921 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6874;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=1500;AN=2184 GT:DS:GL:BD 0.68681318 1
1 179477966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179478009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6871;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179478024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179478274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8960;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179478393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179478659 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8863;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179478695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179478799 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8319;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179478819 . GT G 833 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8761;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179478831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179478894 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3370;AVGPOST=0.9952;RSQ=0.9927;ERATE=0.0007;THETA=0.0001;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 179478943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0002;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179478968 rs35670650 CA C 37391 PASS INDEL;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3375;AVGPOST=0.9855;RSQ=0.9762;ERATE=0.0030;THETA=0.0003;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 179479012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7276;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=1588;AN=2184 GT:DS:GL:BD 0.72710621 1
1 179479036 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3268;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0004;THETA=0.0007;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 179479128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8720;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179479136 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6240;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179479167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5261;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179479209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0349;AVGPOST=0.9992;RSQ=0.9905;ERATE=0.0002;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 179479226 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0122;AVGPOST=0.9990;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179479448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7273;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0007;AC=1587;AN=2184 GT:DS:GL:BD 0.72664833 1
1 179479557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0274;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179479577 . TA T 9636 PASS INDEL;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1296;AVGPOST=0.9972;RSQ=0.9901;ERATE=0.0005;THETA=0.0006;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 179479754 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.8559;AVGPOST=0.9983;RSQ=0.9948;ERATE=0.0004;THETA=0.0005;AC=1869;AN=2184 GT:DS:GL:BD 0.85576922 1
1 179479758 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.8560;AVGPOST=0.9988;RSQ=0.9962;ERATE=0.0004;THETA=0.0006;AC=1869;AN=2184 GT:DS:GL:BD 0.85576922 1
1 179479766 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0280;AVGPOST=0.9987;RSQ=0.9859;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179479775 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1286;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 179479803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8421;AVGPOST=0.9988;RSQ=0.9966;ERATE=0.0004;THETA=0.0006;AC=1838;AN=2184 GT:DS:GL:BD 0.84157509 1
1 179479984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5018;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179480135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.6948;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179480136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9502;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179480259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1463;AVGPOST=0.9963;RSQ=0.9875;ERATE=0.0007;THETA=0.0005;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 179480305 . C CA 499 PASS INDEL;BAVGPOST=0.942;BRSQ=0.488;LDAF=0.1111;AVGPOST=0.8672;RSQ=0.4419;ERATE=0.0238;THETA=0.0002;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 179480422 rs113441523 GTA G 20426 PASS INDEL;BAVGPOST=0.980;BRSQ=0.253;LDAF=0.9485;AVGPOST=0.9182;RSQ=0.3586;ERATE=0.0071;THETA=0.0005;AC=2131;AN=2184 GT:DS:GL:BD 0.97573262 1
1 179480462 . T TTA 5461 PASS INDEL;BAVGPOST=0.956;BRSQ=0.905;LDAF=0.3025;AVGPOST=0.9269;RSQ=0.8661;ERATE=0.0098;THETA=0.0007;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 179480559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.857;LDAF=0.3971;AVGPOST=0.8822;RSQ=0.8004;ERATE=0.0504;THETA=0.0002;AC=843;AN=2184 GT:DS:GL:BD 0.38598901 0
1 179480601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0072;AVGPOST=0.9951;RSQ=0.7338;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179480650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5390;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179480710 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6805;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179480840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0060;AVGPOST=0.9987;RSQ=0.9130;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179480841 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0050;AVGPOST=0.9979;RSQ=0.8209;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179480920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179480926 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7254;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179481170 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6472;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179481189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7247;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179481357 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0040;AVGPOST=0.9956;RSQ=0.5881;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179481401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179481428 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179481600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6270;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179481632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7813;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179481709 . G GA 78 PASS INDEL;BAVGPOST=0.960;BRSQ=0.299;LDAF=0.1308;AVGPOST=0.8228;RSQ=0.3821;ERATE=0.0090;THETA=0.0003;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 179481712 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0191;AVGPOST=0.9983;RSQ=0.9656;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179481743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5631;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179481807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8824;AVGPOST=0.9986;RSQ=0.9951;ERATE=0.0004;THETA=0.0005;AC=1926;AN=2184 GT:DS:GL:BD 0.88186812 1
1 179481910 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179481993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7156;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179482212 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8532;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179482216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8719;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179482358 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179482502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5291;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179482604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1285;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 179482616 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0261;AVGPOST=0.9996;RSQ=0.9938;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179482666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179482959 . CTTCTAGGTT C 5046 PASS INDEL;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0252;AVGPOST=0.9991;RSQ=0.9856;ERATE=0.0004;THETA=0.0027;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179483271 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5187;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179483292 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7794;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179483303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7607;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179483373 . T TC 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5409;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179483441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7901;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179483442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0271;AVGPOST=0.9996;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179483492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179483510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9998;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179483532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0002;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179483604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9245;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179483614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1689;AVGPOST=0.9991;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 179483757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0275;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179483795 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1769;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 179483875 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8494;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179483907 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179483954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179483971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8763;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179484000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0262;AVGPOST=0.9995;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179484026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179484113 . A AG 79 PASS INDEL;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8156;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179484170 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0254;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179484334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3353;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 179484409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0036;AVGPOST=0.9973;RSQ=0.6985;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179484476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0062;AVGPOST=0.9989;RSQ=0.9156;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179484502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1456;AVGPOST=0.9978;RSQ=0.9926;ERATE=0.0004;THETA=0.0004;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 179484651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4946;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0005;THETA=0.0003;AC=1082;AN=2184 GT:DS:GL:BD 0.49542123 0
1 179484708 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6288;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179484716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9242;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179484821 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3267;AVGPOST=0.9970;RSQ=0.9941;ERATE=0.0006;THETA=0.0006;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 179484849 . CT C 36 PASS INDEL;BAVGPOST=0.996;BRSQ=0.405;LDAF=0.0054;AVGPOST=0.9929;RSQ=0.4886;ERATE=0.0008;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179484854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6965;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179484918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6324;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179484921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179485324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.660;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8064;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179485499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0251;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179485529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9054;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179485548 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1363;AVGPOST=0.9962;RSQ=0.9873;ERATE=0.0004;THETA=0.0004;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 179485634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1476;AVGPOST=0.9981;RSQ=0.9942;ERATE=0.0003;THETA=0.0026;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 179485650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9015;ERATE=0.0004;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179485713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4995;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179485738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179486073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5921;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179486126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6173;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179486171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0189;AVGPOST=0.9995;RSQ=0.9885;ERATE=0.0002;THETA=0.0011;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179486188 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179486222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0276;AVGPOST=0.9995;RSQ=0.9913;ERATE=0.0003;THETA=0.0035;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179486262 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7233;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179486276 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7986;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179486377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179486463 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8109;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179486516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179486550 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1456;AVGPOST=0.9977;RSQ=0.9931;ERATE=0.0004;THETA=0.0003;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 179486553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0262;AVGPOST=0.9995;RSQ=0.9904;ERATE=0.0003;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179486557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0002;THETA=0.0060;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179486559 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6731;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179486598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8725;AVGPOST=0.9978;RSQ=0.9924;ERATE=0.0005;THETA=0.0004;AC=1906;AN=2184 GT:DS:GL:BD 0.87271065 1
1 179486606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6794;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179486609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5785;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179486614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7185;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179486684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7584;ERATE=0.0004;THETA=0.0048;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179486685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.3315;AVGPOST=0.9927;RSQ=0.9876;ERATE=0.0007;THETA=0.0010;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 179486742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0031;AVGPOST=0.9972;RSQ=0.6182;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179486868 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0281;AVGPOST=0.9993;RSQ=0.9886;ERATE=0.0003;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179486873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9308;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179486886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179486975 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179487093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8915;ERATE=0.0006;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179487107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7999;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179487323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179487332 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.568;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7950;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179487376 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.8989;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=1963;AN=2184 GT:DS:GL:BD 0.89880955 1
1 179487400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0282;AVGPOST=0.9991;RSQ=0.9863;ERATE=0.0004;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179487413 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6693;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179487514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.909;LDAF=0.8492;AVGPOST=0.9687;RSQ=0.9135;ERATE=0.0070;THETA=0.0034;AC=1872;AN=2184 GT:DS:GL:BD 0.85714287 1
1 179487527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.978;LDAF=0.3554;AVGPOST=0.9816;RSQ=0.9703;ERATE=0.0024;THETA=0.0004;AC=779;AN=2184 GT:DS:GL:BD 0.35668498 0
1 179487702 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179487786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7348;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179487816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4301;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179487856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8795;AVGPOST=0.9988;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=1920;AN=2184 GT:DS:GL:BD 0.87912089 1
1 179487931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0270;AVGPOST=0.9993;RSQ=0.9895;ERATE=0.0003;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179487938 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0185;AVGPOST=0.9993;RSQ=0.9857;ERATE=0.0002;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 179487940 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0270;AVGPOST=0.9990;RSQ=0.9861;ERATE=0.0003;THETA=0.0030;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179487998 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9996;RSQ=0.9906;ERATE=0.0003;THETA=0.0016;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179488065 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9718;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179488160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9567;ERATE=0.0002;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179488178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0266;AVGPOST=0.9996;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 179488295 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8239;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179488350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4952;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0006;THETA=0.0004;AC=1081;AN=2184 GT:DS:GL:BD 0.49496338 0
1 179488499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6230;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179488561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0053;AVGPOST=0.9991;RSQ=0.9278;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179488723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8531;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179488769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8779;AVGPOST=0.9982;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=1916;AN=2184 GT:DS:GL:BD 0.87728935 1
1 179488795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.8758;AVGPOST=0.9940;RSQ=0.9807;ERATE=0.0008;THETA=0.0007;AC=1915;AN=2184 GT:DS:GL:BD 0.87683153 1
1 179488835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7311;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179488965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3346;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 179489007 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8552;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179489064 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179489142 . TC T 1201 PASS INDEL;BAVGPOST=0.819;BRSQ=0.664;LDAF=0.2740;AVGPOST=0.8133;RSQ=0.6852;ERATE=0.0352;THETA=0.0003;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 179489144 rs71114531 CT C 49487 PASS INDEL;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4944;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0005;THETA=0.0003;AC=1080;AN=2184 GT:DS:GL:BD 0.49450549 0
1 179489315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6938;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179489334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179489402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.964;LDAF=0.3526;AVGPOST=0.9903;RSQ=0.9844;ERATE=0.0008;THETA=0.0003;AC=775;AN=2184 GT:DS:GL:BD 0.35485348 0
1 179489488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8793;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=1920;AN=2184 GT:DS:GL:BD 0.87912089 1
1 179489575 . T TTTTA 141 PASS INDEL;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0021;AVGPOST=0.9969;RSQ=0.4487;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179489675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8449;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179489722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7942;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179489735 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0253;AVGPOST=0.9995;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179489792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4516;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179489991 . G GTA 36 PASS INDEL;BAVGPOST=0.997;BRSQ=0.390;LDAF=0.0039;AVGPOST=0.9941;RSQ=0.3932;ERATE=0.0007;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179490002 . TAC T 26 PASS INDEL;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0040;AVGPOST=0.9941;RSQ=0.3527;ERATE=0.0010;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179490078 rs77970121 TTTTAA T 59806 PASS INDEL;BAVGPOST=0.987;BRSQ=0.953;LDAF=0.8681;AVGPOST=0.9782;RSQ=0.9316;ERATE=0.0038;THETA=0.0005;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 179490154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.608;LDAF=0.0031;AVGPOST=0.9997;RSQ=0.9585;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179490182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9904;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179490331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0022;AVGPOST=0.9970;RSQ=0.5258;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179490386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179490446 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179490494 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6706;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179490565 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9673;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179490572 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179490818 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179491033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.510;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5678;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179491137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8790;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=1920;AN=2184 GT:DS:GL:BD 0.87912089 1
1 179491137 . G GA 17304 PASS INDEL;BAVGPOST=0.867;BRSQ=0.658;LDAF=0.7587;AVGPOST=0.8011;RSQ=0.6010;ERATE=0.0498;THETA=0.0002;AC=1735;AN=2184 GT:DS:GL:BD 0.79441392 1
1 179491150 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6683;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179491385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5411;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179491438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3625;AVGPOST=0.9954;RSQ=0.9926;ERATE=0.0008;THETA=0.0009;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 179491471 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179491591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8371;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179491629 . CAA C 355 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9531;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179491731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7920;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179491795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0126;AVGPOST=0.9992;RSQ=0.9701;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179491822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0249;AVGPOST=0.9994;RSQ=0.9892;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179491831 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.645;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179491847 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.3340;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0005;THETA=0.0004;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 179491863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1447;AVGPOST=0.9976;RSQ=0.9929;ERATE=0.0004;THETA=0.0008;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 179491986 . A AT 15 PASS INDEL;BAVGPOST=0.998;BRSQ=0.576;LDAF=0.0073;AVGPOST=0.9915;RSQ=0.5716;ERATE=0.0010;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179492065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0346;AVGPOST=0.9977;RSQ=0.9737;ERATE=0.0003;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 179492085 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.4638;AVGPOST=0.9932;RSQ=0.9895;ERATE=0.0007;THETA=0.0003;AC=1011;AN=2184 GT:DS:GL:BD 0.46291208 0
1 179492303 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179492317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179492404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7697;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179492439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0286;AVGPOST=0.9985;RSQ=0.9818;ERATE=0.0004;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179492526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8843;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179492585 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.6875;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179492652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0068;AVGPOST=0.9998;RSQ=0.9848;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179492655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8792;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=1920;AN=2184 GT:DS:GL:BD 0.87912089 1
1 179492732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8897;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179492735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0124;AVGPOST=0.9994;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179492792 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9720;ERATE=0.0002;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179492879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9476;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179493027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.850;LDAF=0.0176;AVGPOST=0.9960;RSQ=0.9059;ERATE=0.0005;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179493140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179493331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4787;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179493536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5792;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179493574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5429;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179493747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8154;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179493835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0279;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0002;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179493855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1889;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 179493895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179494145 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8792;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0002;THETA=0.0003;AC=1920;AN=2184 GT:DS:GL:BD 0.87912089 1
1 179494198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179494200 . G GC 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179494258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179494447 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179494504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179494525 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179494574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179494595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179494665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8792;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0002;THETA=0.0005;AC=1920;AN=2184 GT:DS:GL:BD 0.87912089 1
1 179494699 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179494705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179494775 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0253;AVGPOST=0.9997;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179494928 . C CAATA 170 PASS INDEL;BAVGPOST=0.985;BRSQ=0.603;LDAF=0.0319;AVGPOST=0.9716;RSQ=0.6782;ERATE=0.0020;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179495025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5470;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179495073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6120;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179495134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0249;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0002;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179495265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9113;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179495354 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.949;LDAF=0.4497;AVGPOST=0.9514;RSQ=0.9298;ERATE=0.0129;THETA=0.0004;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 179495403 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0068;AVGPOST=0.9995;RSQ=0.9656;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179495441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179495522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179495591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8793;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0005;THETA=0.0004;AC=1920;AN=2184 GT:DS:GL:BD 0.87912089 1
1 179495668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.8995;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179495687 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9486;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179495706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6970;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179495736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9395;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179495846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7714;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179496035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9192;ERATE=0.0002;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179496036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8895;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179496330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.650;LDAF=0.0097;AVGPOST=0.9925;RSQ=0.6936;ERATE=0.0009;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179496380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0266;AVGPOST=0.9995;RSQ=0.9926;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 179496487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8374;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179496579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179496680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1456;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0002;THETA=0.0003;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 179496779 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0279;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0002;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179496836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0159;AVGPOST=0.9991;RSQ=0.9802;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179496909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0049;AVGPOST=0.9979;RSQ=0.8424;ERATE=0.0002;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179496973 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8766;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 179497019 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3599;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 179497046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0346;AVGPOST=0.9979;RSQ=0.9753;ERATE=0.0002;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 179497064 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3593;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0003;THETA=0.0007;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 179497094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0246;AVGPOST=0.9996;RSQ=0.9926;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179497097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9221;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179497139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0190;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0002;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179497239 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179497258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179497319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8927;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179497359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8768;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0002;THETA=0.0008;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 179497440 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9406;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179497443 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179497575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179497576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179497627 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179497708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9651;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179497725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1453;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0002;THETA=0.0003;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 179497737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179497885 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179497911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9189;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179497954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.947;LDAF=0.0264;AVGPOST=0.9981;RSQ=0.9729;ERATE=0.0006;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179498006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179498022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9862;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179498132 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3594;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 179498149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3595;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 179498173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179498222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.893;LDAF=0.0226;AVGPOST=0.9962;RSQ=0.9350;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 179498291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0281;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0004;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179498535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7527;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179498587 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8500;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179498603 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179498822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.7319;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179498842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0046;AVGPOST=0.9994;RSQ=0.9450;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179498853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7975;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179498870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0271;AVGPOST=0.9995;RSQ=0.9924;ERATE=0.0002;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179498872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179498925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0248;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 179498953 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6609;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179499234 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.901;LDAF=0.0153;AVGPOST=0.9972;RSQ=0.9312;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179499284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0045;AVGPOST=0.9961;RSQ=0.6412;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179499325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179499326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0082;AVGPOST=0.9983;RSQ=0.9169;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179499353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179499366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7947;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179499392 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1439;AVGPOST=0.9970;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 179499406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.4873;AVGPOST=0.9953;RSQ=0.9922;ERATE=0.0009;THETA=0.0004;AC=1065;AN=2184 GT:DS:GL:BD 0.48763737 0
1 179499443 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6535;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179499459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.960;LDAF=0.3560;AVGPOST=0.9915;RSQ=0.9853;ERATE=0.0012;THETA=0.0005;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 179499467 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.809;LDAF=0.0071;AVGPOST=0.9974;RSQ=0.8574;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179499549 . CCT C 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5568;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179499588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5183;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179499606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7514;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179499698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179499780 rs58244319 ATGT A 25672 PASS INDEL;BAVGPOST=0.971;BRSQ=0.944;LDAF=0.3484;AVGPOST=0.9842;RSQ=0.9761;ERATE=0.0005;THETA=0.0004;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 179499785 rs57694417 CAAAAG C 37345 PASS INDEL;BAVGPOST=0.971;BRSQ=0.944;LDAF=0.3486;AVGPOST=0.9753;RSQ=0.9632;ERATE=0.0022;THETA=0.0007;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 179499807 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179499839 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3758;AVGPOST=0.9963;RSQ=0.9943;ERATE=0.0004;THETA=0.0009;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 179499868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3585;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 179499916 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179500018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7096;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179500097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179500170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179500181 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179500267 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0126;AVGPOST=0.9995;RSQ=0.9818;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179500358 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1484;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0004;THETA=0.0002;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 179500640 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0251;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0002;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179500673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179500723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179500743 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9514;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179500765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9524;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179500924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179500964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179501114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179501190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179501365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8764;AVGPOST=0.9991;RSQ=0.9965;ERATE=0.0003;THETA=0.0012;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 179501583 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.973;LDAF=0.3573;AVGPOST=0.9943;RSQ=0.9915;ERATE=0.0006;THETA=0.0006;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 179501618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9769;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179501636 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179501636 . C CT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6542;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179501654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3596;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0006;THETA=0.0002;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 179501694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9880;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179501737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.3592;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 179501871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3842;AVGPOST=0.9968;RSQ=0.9948;ERATE=0.0009;THETA=0.0005;AC=838;AN=2184 GT:DS:GL:BD 0.38369963 0
1 179501914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0131;AVGPOST=0.9984;RSQ=0.9485;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179501999 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179502079 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7139;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179502230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6056;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179502231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0136;AVGPOST=0.9983;RSQ=0.9467;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179502258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3902;AVGPOST=0.9803;RSQ=0.9682;ERATE=0.0047;THETA=0.0005;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 179502357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1439;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0002;THETA=0.0004;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 179502394 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179502599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3599;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 179502672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179502691 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179502714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179502753 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179502925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179502988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179503015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179503105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179503326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0279;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179503372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0156;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0002;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179503410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179503440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0280;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179503660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8142;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179503698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3337;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0002;THETA=0.0002;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 179503699 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179503806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3597;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 179503892 . AGAG A 119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4757;ERATE=0.0004;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179503895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179503909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179504025 rs72261568 AAAG A 28906 PASS INDEL;BAVGPOST=0.988;BRSQ=0.978;LDAF=0.3598;AVGPOST=0.9905;RSQ=0.9846;ERATE=0.0010;THETA=0.0003;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 179504043 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3777;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0015;THETA=0.0004;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 179504070 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9939;ERATE=0.0002;THETA=0.0001;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179504130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3597;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 179504310 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3596;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 179504336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9685;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179504340 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8425;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179504348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179504371 . T TA 209 PASS INDEL;BAVGPOST=0.998;BRSQ=0.788;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7914;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179504406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.5497;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179504480 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179504488 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.4517;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179504515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9992;RSQ=0.9859;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179504641 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.884;BRSQ=0.753;LDAF=0.2520;AVGPOST=0.9115;RSQ=0.8501;ERATE=0.0020;THETA=0.0004;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 179504777 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.8221;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179504790 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1449;AVGPOST=0.9958;RSQ=0.9869;ERATE=0.0004;THETA=0.0002;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 179504870 . AC A 576 PASS INDEL;BAVGPOST=0.991;BRSQ=0.750;LDAF=0.0171;AVGPOST=0.9944;RSQ=0.8741;ERATE=0.0005;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179504987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.851;BRSQ=0.625;LDAF=0.7581;AVGPOST=0.8442;RSQ=0.6871;ERATE=0.0091;THETA=0.0005;AC=1735;AN=2184 GT:DS:GL:BD 0.79441392 1
1 179505045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.923;LDAF=0.1380;AVGPOST=0.9902;RSQ=0.9699;ERATE=0.0005;THETA=0.0020;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 179505183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7469;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179505184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6050;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179505202 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0131;AVGPOST=0.9976;RSQ=0.9280;ERATE=0.0003;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179505211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179505220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0273;AVGPOST=0.9990;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179505232 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5116;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179505299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179505368 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.907;BRSQ=0.796;LDAF=0.8038;AVGPOST=0.9462;RSQ=0.8885;ERATE=0.0013;THETA=0.0004;AC=1777;AN=2184 GT:DS:GL:BD 0.81364471 1
1 179505378 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.905;BRSQ=0.792;LDAF=0.8029;AVGPOST=0.9458;RSQ=0.8895;ERATE=0.0007;THETA=0.0004;AC=1772;AN=2184 GT:DS:GL:BD 0.81135529 1
1 179505588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.947;LDAF=0.8594;AVGPOST=0.9815;RSQ=0.9484;ERATE=0.0011;THETA=0.0004;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 179505692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0030;AVGPOST=0.9960;RSQ=0.5692;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179505696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0056;AVGPOST=0.9978;RSQ=0.8281;ERATE=0.0005;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179505737 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0070;AVGPOST=0.9960;RSQ=0.7799;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179505745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.872;LDAF=0.0319;AVGPOST=0.9889;RSQ=0.8589;ERATE=0.0011;THETA=0.0007;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179505954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4333;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179506279 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1408;AVGPOST=0.9929;RSQ=0.9795;ERATE=0.0004;THETA=0.0004;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 179506344 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179506383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.442;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3694;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179506445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6946;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179506517 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179506627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.953;LDAF=0.4332;AVGPOST=0.9763;RSQ=0.9644;ERATE=0.0031;THETA=0.0002;AC=950;AN=2184 GT:DS:GL:BD 0.43498167 0
1 179506662 . A AC 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4816;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179506882 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179507008 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179507013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3348;AVGPOST=0.9971;RSQ=0.9946;ERATE=0.0007;THETA=0.0003;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 179507066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0042;AVGPOST=0.9959;RSQ=0.6052;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179507222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5644;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179507234 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0287;AVGPOST=0.9985;RSQ=0.9823;ERATE=0.0003;THETA=0.0002;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179507446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179507632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.877;LDAF=0.2989;AVGPOST=0.9497;RSQ=0.9221;ERATE=0.0005;THETA=0.0004;AC=665;AN=2184 GT:DS:GL:BD 0.30448717 0
1 179507633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.877;LDAF=0.2985;AVGPOST=0.9491;RSQ=0.9208;ERATE=0.0004;THETA=0.0057;AC=664;AN=2184 GT:DS:GL:BD 0.30402932 0
1 179507662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4545;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179507806 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9254;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179507925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.3287;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0005;THETA=0.0008;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 179508038 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8443;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179508050 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9181;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179508108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8668;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179508149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179508194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.758;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9356;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179508210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0060;AVGPOST=0.9990;RSQ=0.9235;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179508270 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0196;AVGPOST=0.9981;RSQ=0.9566;ERATE=0.0005;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179508351 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0033;AVGPOST=0.9991;RSQ=0.8877;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179508421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3591;AVGPOST=0.9981;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 179508433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0271;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179508505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9996;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179508676 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4189;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179508780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179508818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4637;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179508856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.792;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8444;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179508867 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.5847;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179508938 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6343;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179508994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6206;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179508996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179508997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0279;AVGPOST=0.9982;RSQ=0.9744;ERATE=0.0004;THETA=0.0012;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179509026 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.871;LDAF=0.0132;AVGPOST=0.9968;RSQ=0.9125;ERATE=0.0003;THETA=0.0012;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179509076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179509105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7513;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179509115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5711;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179509140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8014;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179509201 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0095;AVGPOST=0.9988;RSQ=0.9476;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179509280 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0243;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0003;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179509287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179509487 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179509518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179509611 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179509623 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0273;AVGPOST=0.9993;RSQ=0.9883;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179509652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7914;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179509746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0094;AVGPOST=0.9981;RSQ=0.9151;ERATE=0.0005;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179509749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.4878;AVGPOST=0.9908;RSQ=0.9857;ERATE=0.0006;THETA=0.0005;AC=1065;AN=2184 GT:DS:GL:BD 0.48763737 0
1 179509755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6250;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179509762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9985;RSQ=0.9710;ERATE=0.0003;THETA=0.0022;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179509810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7081;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179509873 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.751;LDAF=0.0079;AVGPOST=0.9978;RSQ=0.8937;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179509899 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.8917;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179509904 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0251;AVGPOST=0.9997;RSQ=0.9954;ERATE=0.0002;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 179510094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.753;LDAF=0.0055;AVGPOST=0.9966;RSQ=0.7414;ERATE=0.0008;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179510156 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0049;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179510248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0167;AVGPOST=0.9979;RSQ=0.9421;ERATE=0.0004;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179510263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7909;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179510352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5132;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179510470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7793;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179510535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0194;AVGPOST=0.9983;RSQ=0.9618;ERATE=0.0005;THETA=0.0012;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179510565 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8767;AVGPOST=0.9952;RSQ=0.9854;ERATE=0.0003;THETA=0.0023;AC=1918;AN=2184 GT:DS:GL:BD 0.87820512 1
1 179510608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0272;AVGPOST=0.9993;RSQ=0.9882;ERATE=0.0004;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179510618 . T TTG 10039 PASS INDEL;BAVGPOST=0.861;BRSQ=0.772;LDAF=0.3738;AVGPOST=0.8516;RSQ=0.7768;ERATE=0.0168;THETA=0.0006;AC=794;AN=2184 GT:DS:GL:BD 0.36355311 0
1 179510619 rs35516684 T TG 19953 PASS INDEL;BAVGPOST=0.931;BRSQ=0.891;LDAF=0.4868;AVGPOST=0.9514;RSQ=0.9389;ERATE=0.0006;THETA=0.0033;AC=1082;AN=2184 GT:DS:GL:BD 0.49542123 0
1 179510620 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.894;LDAF=0.3861;AVGPOST=0.9073;RSQ=0.8427;ERATE=0.0359;THETA=0.0051;AC=824;AN=2184 GT:DS:GL:BD 0.37728938 0
1 179510627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.967;LDAF=0.3532;AVGPOST=0.9845;RSQ=0.9760;ERATE=0.0005;THETA=0.0007;AC=776;AN=2184 GT:DS:GL:BD 0.35531136 0
1 179510640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9636;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179510716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6193;ERATE=0.0004;THETA=0.0093;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179510774 . A ATAATATATGCATGT 65376 PASS INDEL;BAVGPOST=0.930;BRSQ=0.857;LDAF=0.3361;AVGPOST=0.9515;RSQ=0.9248;ERATE=0.0031;THETA=0.0007;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 179510785 . A ATGT 27696 PASS INDEL;BAVGPOST=0.910;BRSQ=0.803;LDAF=0.2868;AVGPOST=0.9251;RSQ=0.8613;ERATE=0.0083;THETA=0.0004;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 179510807 . CATA C 8671 PASS INDEL;BAVGPOST=0.900;BRSQ=0.737;LDAF=0.2528;AVGPOST=0.8854;RSQ=0.7722;ERATE=0.0126;THETA=0.0039;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 179510826 . A AAT 2007 PASS INDEL;BAVGPOST=0.950;BRSQ=0.668;LDAF=0.1103;AVGPOST=0.9050;RSQ=0.6257;ERATE=0.0178;THETA=0.0005;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 179510849 rs67249229 G GATA 8925 PASS INDEL;BAVGPOST=0.975;BRSQ=0.911;LDAF=0.1328;AVGPOST=0.9805;RSQ=0.9453;ERATE=0.0003;THETA=0.0004;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 179510854 . T TTA 7487 PASS INDEL;BAVGPOST=0.968;BRSQ=0.860;LDAF=0.1268;AVGPOST=0.9653;RSQ=0.8863;ERATE=0.0015;THETA=0.0016;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 179510860 rs72078317 CATA C 14525 PASS INDEL;BAVGPOST=0.978;BRSQ=0.922;LDAF=0.1409;AVGPOST=0.9878;RSQ=0.9653;ERATE=0.0005;THETA=0.0003;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 179510876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7718;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179511120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6238;ERATE=0.0012;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179511151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.9230;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179511185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9711;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179511237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3583;AVGPOST=0.9959;RSQ=0.9934;ERATE=0.0005;THETA=0.0003;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 179511287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6695;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179511311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6084;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179511435 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0054;AVGPOST=0.9988;RSQ=0.9146;ERATE=0.0003;THETA=0.0041;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179511493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5146;AVGPOST=0.9973;RSQ=0.9962;ERATE=0.0005;THETA=0.0007;AC=1125;AN=2184 GT:DS:GL:BD 0.51510990 1
1 179511539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0267;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0002;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179511621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179511645 . G GT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7446;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179511654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3839;AVGPOST=0.9961;RSQ=0.9939;ERATE=0.0009;THETA=0.0006;AC=838;AN=2184 GT:DS:GL:BD 0.38369963 0
1 179511739 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.797;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.6990;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179511743 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5918;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179511775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.9973;AVGPOST=0.9995;RSQ=0.9242;ERATE=0.0003;THETA=0.0006;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 179511805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0238;AVGPOST=0.9979;RSQ=0.9636;ERATE=0.0002;THETA=0.0006;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 179511865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.5153;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179512039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3588;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0005;THETA=0.0005;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 179512040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1468;AVGPOST=0.9980;RSQ=0.9935;ERATE=0.0003;THETA=0.0003;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179512462 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179512496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179512531 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0197;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0002;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 179512630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.919;LDAF=0.3947;AVGPOST=0.9778;RSQ=0.9682;ERATE=0.0007;THETA=0.0002;AC=850;AN=2184 GT:DS:GL:BD 0.38919413 0
1 179512686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179512759 . AT A 2541 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0233;AVGPOST=0.9982;RSQ=0.9705;ERATE=0.0004;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 179512778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6494;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179512881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9979;RSQ=0.9127;ERATE=0.0002;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179513055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9775;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179513087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4504;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179513129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4359;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179513144 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179513214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4545;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179513262 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179513279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0266;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0002;THETA=0.0033;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 179513282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179513315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0190;AVGPOST=0.9994;RSQ=0.9887;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179513353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9816;ERATE=0.0003;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179513394 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8121;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179513434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0004;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179513662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0070;AVGPOST=0.9990;RSQ=0.9380;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179513679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.945;LDAF=0.3486;AVGPOST=0.9692;RSQ=0.9505;ERATE=0.0055;THETA=0.0003;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 179513763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0272;AVGPOST=0.9983;RSQ=0.9753;ERATE=0.0004;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 179513764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1566;AVGPOST=0.9915;RSQ=0.9762;ERATE=0.0007;THETA=0.0032;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 179513775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0058;AVGPOST=0.9969;RSQ=0.7530;ERATE=0.0008;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179513803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.817;LDAF=0.0086;AVGPOST=0.9960;RSQ=0.7924;ERATE=0.0005;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179513819 . A AG 85 PASS INDEL;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4367;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179513889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0349;AVGPOST=0.9987;RSQ=0.9880;ERATE=0.0003;THETA=0.0034;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 179513977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.9042;AVGPOST=0.9960;RSQ=0.9840;ERATE=0.0005;THETA=0.0005;AC=1975;AN=2184 GT:DS:GL:BD 0.90430403 1
1 179514008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179514115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3301;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0004;THETA=0.0008;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 179514184 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0002;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179514421 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8099;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179514696 . CCTGACGGA C 13850 PASS INDEL;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0405;AVGPOST=0.9961;RSQ=0.9655;ERATE=0.0007;THETA=0.0002;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 179514777 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3577;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0005;THETA=0.0006;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 179514902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179515023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0266;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 179515029 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7573;ERATE=0.0006;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179515216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9701;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179515630 rs111990625 ACTT A 5180 PASS INDEL;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0261;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0002;THETA=0.0009;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179515645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6862;ERATE=0.0006;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179515685 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5649;ERATE=0.0004;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179515814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.9154;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179515894 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1226;AVGPOST=0.9969;RSQ=0.9888;ERATE=0.0007;THETA=0.0023;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 179515966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.931;LDAF=0.0166;AVGPOST=0.9986;RSQ=0.9631;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179516072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5384;AVGPOST=0.9964;RSQ=0.9947;ERATE=0.0005;THETA=0.0016;AC=1176;AN=2184 GT:DS:GL:BD 0.53846157 1
1 179516281 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9045;AVGPOST=0.9989;RSQ=0.9956;ERATE=0.0003;THETA=0.0001;AC=1976;AN=2184 GT:DS:GL:BD 0.90476191 1
1 179516362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179516547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0391;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0052;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 179516603 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7267;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179516614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3143;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 179516646 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3136;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 179516648 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0898;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179516716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3273;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 179516738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5894;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 179516749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0170;AVGPOST=0.9990;RSQ=0.9767;ERATE=0.0002;THETA=0.0020;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179517003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3137;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 179517032 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179517067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179517080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7647;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179517140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3254;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0004;THETA=0.0014;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 179517163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5886;AVGPOST=0.9970;RSQ=0.9949;ERATE=0.0012;THETA=0.0003;AC=1286;AN=2184 GT:DS:GL:BD 0.58882785 1
1 179517170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179517189 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179517201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7428;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179517366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9030;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0002;THETA=0.0003;AC=1972;AN=2184 GT:DS:GL:BD 0.90293038 1
1 179517416 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179517466 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3140;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0002;THETA=0.0003;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 179517472 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179517521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5898;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0007;THETA=0.0003;AC=1287;AN=2184 GT:DS:GL:BD 0.58928573 1
1 179517544 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179517557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179517714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3136;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 179517827 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6352;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179517833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0171;AVGPOST=0.9995;RSQ=0.9905;ERATE=0.0002;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179517860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5460;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=1193;AN=2184 GT:DS:GL:BD 0.54624540 1
1 179518126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5782;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179518260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1480;AVGPOST=0.9982;RSQ=0.9950;ERATE=0.0004;THETA=0.0003;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 179518329 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0190;AVGPOST=0.9995;RSQ=0.9892;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179518405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179518406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0053;AVGPOST=0.9990;RSQ=0.9174;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179518431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0385;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 179518459 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0655;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0011;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 179518523 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0271;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179518571 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7021;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179518584 . G GA 10311 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0382;AVGPOST=0.9993;RSQ=0.9925;ERATE=0.0003;THETA=0.0002;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 179518635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179518684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179518742 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9859;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179518795 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0282;AVGPOST=0.9992;RSQ=0.9892;ERATE=0.0002;THETA=0.0002;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179518799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4616;AVGPOST=0.9945;RSQ=0.9920;ERATE=0.0011;THETA=0.0010;AC=1005;AN=2184 GT:DS:GL:BD 0.46016484 0
1 179518806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8941;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179518816 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6611;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179518858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4006;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0005;THETA=0.0002;AC=875;AN=2184 GT:DS:GL:BD 0.40064102 0
1 179518859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6949;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179518999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.7038;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179519001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6560;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179519091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179519127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179519191 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5752;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179519265 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3043;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179519311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5444;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179519383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6785;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179519489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5754;AVGPOST=0.9976;RSQ=0.9956;ERATE=0.0008;THETA=0.0003;AC=1255;AN=2184 GT:DS:GL:BD 0.57463372 1
1 179519608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3130;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0005;THETA=0.0002;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 179519637 rs66602391 ATTTC A 20799 PASS INDEL;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1482;AVGPOST=0.9944;RSQ=0.9846;ERATE=0.0005;THETA=0.0003;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 179519660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.582;LDAF=0.0022;AVGPOST=0.9969;RSQ=0.4268;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179519686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179519871 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179519880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9014;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=1969;AN=2184 GT:DS:GL:BD 0.90155679 1
1 179520050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2870;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0002;THETA=0.0003;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 179520099 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9370;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179520108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1883;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0002;THETA=0.0006;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 179520135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179520151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9035;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0004;AC=1973;AN=2184 GT:DS:GL:BD 0.90338826 1
1 179520254 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5746;AVGPOST=0.9990;RSQ=0.9988;ERATE=0.0002;THETA=0.0005;AC=1255;AN=2184 GT:DS:GL:BD 0.57463372 1
1 179520412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179520422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0763;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 179520506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5750;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0003;AC=1255;AN=2184 GT:DS:GL:BD 0.57463372 1
1 179520569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179520575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179520602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179520603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179520660 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0763;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 179520698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179520715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0002;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179520736 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179520791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0193;AVGPOST=0.9996;RSQ=0.9907;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179520844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1864;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0002;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 179520888 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6493;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179520895 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9468;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179520972 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=1.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0003;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 179521013 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6174;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179521025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179521031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179521048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179521085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179521096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179521260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9099;AVGPOST=0.9989;RSQ=0.9947;ERATE=0.0002;THETA=0.0004;AC=1987;AN=2184 GT:DS:GL:BD 0.90979856 1
1 179521270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179521432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8839;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179521479 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0003;THETA=0.0035;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179521512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0148;AVGPOST=0.9993;RSQ=0.9834;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179521516 . G GT 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7165;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179521531 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179521553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=1.0000;RSQ=0.9920;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179521575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179521626 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179521684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0283;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179521731 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0231;AVGPOST=0.9995;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 179521740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179521751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179521754 . CTT C 56 PASS INDEL;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3682;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179521932 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4362;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0004;THETA=0.0003;AC=952;AN=2184 GT:DS:GL:BD 0.43589744 0
1 179521994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179522074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179522082 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0330;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0002;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 179522099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0169;AVGPOST=0.9964;RSQ=0.9130;ERATE=0.0006;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179522124 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179522221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4367;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0004;THETA=0.0007;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 179522227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1468;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0003;THETA=0.0014;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179522340 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1470;AVGPOST=0.9986;RSQ=0.9959;ERATE=0.0004;THETA=0.0002;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 179522369 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179522523 . TG T 201 PASS INDEL;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8798;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179522553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5774;AVGPOST=0.9976;RSQ=0.9963;ERATE=0.0005;THETA=0.0002;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 179522556 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179522601 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.9972;AVGPOST=0.9979;RSQ=0.7428;ERATE=0.0004;THETA=0.0007;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 179522658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8643;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179522679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179522795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.7976;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179522860 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1476;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0006;THETA=0.0006;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 179522929 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5922;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179522942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9124;AVGPOST=0.9991;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=1993;AN=2184 GT:DS:GL:BD 0.91254580 1
1 179522952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0289;AVGPOST=0.9989;RSQ=0.9880;ERATE=0.0002;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179522967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.432;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7190;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179522997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9124;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179523000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.940;LDAF=0.1469;AVGPOST=0.9966;RSQ=0.9901;ERATE=0.0004;THETA=0.0006;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179523031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.963;LDAF=0.1882;AVGPOST=0.9946;RSQ=0.9871;ERATE=0.0007;THETA=0.0003;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 179523072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.920;LDAF=0.1596;AVGPOST=0.9738;RSQ=0.9294;ERATE=0.0011;THETA=0.0002;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 179523078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.691;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8081;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179523090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5776;AVGPOST=0.9957;RSQ=0.9929;ERATE=0.0009;THETA=0.0009;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 179523150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1463;AVGPOST=0.9972;RSQ=0.9906;ERATE=0.0009;THETA=0.0005;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 179523193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.974;LDAF=0.5475;AVGPOST=0.9793;RSQ=0.9702;ERATE=0.0025;THETA=0.0003;AC=1203;AN=2184 GT:DS:GL:BD 0.55082417 1
1 179523275 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1224;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0002;THETA=0.0018;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 179523285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179523297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0287;AVGPOST=0.9994;RSQ=0.9920;ERATE=0.0002;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179523723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179523865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9692;ERATE=0.0002;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179523878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179524099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8510;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179524231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0033;AVGPOST=0.9985;RSQ=0.8386;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179524292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179524475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1468;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0002;THETA=0.0002;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179524505 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179524509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1467;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0001;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179524572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7125;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179524632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9304;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179524650 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0764;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0006;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 179524710 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9616;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179524748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0367;AVGPOST=0.9995;RSQ=0.9944;ERATE=0.0003;THETA=0.0006;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 179524825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179524867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9935;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179524964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1471;AVGPOST=0.9987;RSQ=0.9960;ERATE=0.0004;THETA=0.0007;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179525035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9453;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179525112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9536;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179525124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1467;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179525300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1425;AVGPOST=0.9983;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 179525311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1213;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 179525335 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0115;AVGPOST=0.9981;RSQ=0.9350;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179525348 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8790;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179525351 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179525450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179525484 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179525533 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0150;AVGPOST=0.9989;RSQ=0.9647;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179525537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5853;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179525560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8599;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179525571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8913;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179525589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179525593 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179525811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0280;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0013;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179525826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9288;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179525958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179526052 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1244;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 179526175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179526176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179526191 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179526193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179526214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0216;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 179526405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179526461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0004;THETA=0.0001;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179526462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9796;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179526570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179526585 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179526733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7699;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179526787 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179526871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8476;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179526990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179527041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5598;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179527066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7962;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179527087 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0038;AVGPOST=0.9973;RSQ=0.7639;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179527126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9749;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179527183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.5836;AVGPOST=0.9956;RSQ=0.9924;ERATE=0.0009;THETA=0.0002;AC=1277;AN=2184 GT:DS:GL:BD 0.58470696 1
1 179527230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179527254 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179527270 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3948;AVGPOST=0.9972;RSQ=0.9951;ERATE=0.0006;THETA=0.0002;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 179527286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0364;AVGPOST=0.9975;RSQ=0.9796;ERATE=0.0003;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 179527295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.488;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5163;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179527324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179527380 . C CT 23897 PASS INDEL;BAVGPOST=0.979;BRSQ=0.959;LDAF=0.5573;AVGPOST=0.9518;RSQ=0.9270;ERATE=0.0153;THETA=0.0003;AC=1237;AN=2184 GT:DS:GL:BD 0.56639194 1
1 179527401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1901;AVGPOST=0.9973;RSQ=0.9931;ERATE=0.0008;THETA=0.0034;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 179527517 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5754;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179527532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1467;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179527613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1469;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179527633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5195;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179527770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5981;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179527978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1468;AVGPOST=0.9983;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179527992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0266;AVGPOST=0.9997;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 179528048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9830;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179528143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0082;AVGPOST=0.9991;RSQ=0.9661;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179528162 rs60796780 TG T 18461 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1469;AVGPOST=0.9984;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 179528210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6094;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179528430 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179528525 . AT A 426 PASS INDEL;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8720;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179528801 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179528904 . AGAG A 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7286;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179528917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1467;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0002;THETA=0.0003;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179528927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0356;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 179528928 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179528942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1468;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0002;THETA=0.0003;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179529040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0324;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 179529077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0163;AVGPOST=0.9994;RSQ=0.9903;ERATE=0.0002;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179529133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179529150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6963;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=1521;AN=2184 GT:DS:GL:BD 0.69642860 1
1 179529151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7712;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179529161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9716;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179529172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8713;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179529219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179529287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0002;THETA=0.0013;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179529367 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179529377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0002;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179529380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179529491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6013;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179529523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0970;AVGPOST=0.9984;RSQ=0.9938;ERATE=0.0004;THETA=0.0006;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 179529539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179529548 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179529645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179529652 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179529795 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0194;AVGPOST=0.9979;RSQ=0.9660;ERATE=0.0002;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179529833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0271;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179529934 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0329;AVGPOST=0.9991;RSQ=0.9895;ERATE=0.0003;THETA=0.0007;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 179529937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179530014 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6870;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=1501;AN=2184 GT:DS:GL:BD 0.68727106 1
1 179530017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.964;LDAF=0.6495;AVGPOST=0.9763;RSQ=0.9651;ERATE=0.0066;THETA=0.0004;AC=1422;AN=2184 GT:DS:GL:BD 0.65109891 1
1 179530018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.960;LDAF=0.8987;AVGPOST=0.9905;RSQ=0.9651;ERATE=0.0010;THETA=0.0003;AC=1962;AN=2184 GT:DS:GL:BD 0.89835167 1
1 179530053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179530134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179530141 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1469;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0002;THETA=0.0001;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179530173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179530231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179530321 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9883;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179530375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179530414 . G GT 291 PASS INDEL;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0059;AVGPOST=0.9979;RSQ=0.8447;ERATE=0.0007;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179530428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179530460 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179530753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9837;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179530921 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0053;AVGPOST=0.9982;RSQ=0.8557;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179530926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0121;AVGPOST=0.9995;RSQ=0.9802;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179531009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0094;AVGPOST=0.9959;RSQ=0.8178;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179531067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4994;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179531343 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.909;LDAF=0.0239;AVGPOST=0.9966;RSQ=0.9446;ERATE=0.0004;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 179531356 . A AT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8196;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179531365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2084;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 179531594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4005;AVGPOST=0.9972;RSQ=0.9952;ERATE=0.0007;THETA=0.0005;AC=876;AN=2184 GT:DS:GL:BD 0.40109891 0
1 179531608 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0167;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179531690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8945;AVGPOST=0.9964;RSQ=0.9874;ERATE=0.0005;THETA=0.0002;AC=1954;AN=2184 GT:DS:GL:BD 0.89468867 1
1 179531723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0002;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179531744 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179531807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1478;AVGPOST=0.9987;RSQ=0.9964;ERATE=0.0004;THETA=0.0007;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 179531902 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1230;AVGPOST=0.9978;RSQ=0.9922;ERATE=0.0004;THETA=0.0003;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 179532005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.881;LDAF=0.0082;AVGPOST=0.9979;RSQ=0.9002;ERATE=0.0003;THETA=0.0016;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179532076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0002;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179532095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9122;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=1992;AN=2184 GT:DS:GL:BD 0.91208792 1
1 179532121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1237;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 179532123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.5756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179532148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.6885;AVGPOST=0.9971;RSQ=0.9945;ERATE=0.0009;THETA=0.0003;AC=1503;AN=2184 GT:DS:GL:BD 0.68818682 1
1 179532251 . T TA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6636;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179532280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9757;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179532298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1482;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 179532419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8687;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179532461 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179532463 rs71114535 GA G 21894 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1490;AVGPOST=0.9979;RSQ=0.9936;ERATE=0.0005;THETA=0.0003;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 179532493 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6224;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179532712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179532725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6731;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179532744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8824;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179532751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3941;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=862;AN=2184 GT:DS:GL:BD 0.39468864 0
1 179532841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5675;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179533075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1216;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0002;THETA=0.0003;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 179533104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4881;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179533167 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9179;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179533312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1177;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0002;THETA=0.0003;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 179533326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9972;AVGPOST=0.9996;RSQ=0.9416;ERATE=0.0002;THETA=0.0003;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 179533355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179533589 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179533661 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179533915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0768;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 179533961 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179534141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8475;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179534242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7242;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179534242 . C CA 46 PASS INDEL;BAVGPOST=0.985;BRSQ=0.477;LDAF=0.0210;AVGPOST=0.9706;RSQ=0.4518;ERATE=0.0065;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179534280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179534335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9791;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179534344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0910;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0002;THETA=0.0007;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 179534345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8792;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179534457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8261;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179534510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179534529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179534540 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1244;AVGPOST=0.9977;RSQ=0.9924;ERATE=0.0004;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 179534545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6392;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179534588 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9002;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179534657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179534682 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5946;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179534692 . CTGTT C 299 PASS INDEL;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6728;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179534775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.970;LDAF=0.2152;AVGPOST=0.9911;RSQ=0.9790;ERATE=0.0010;THETA=0.0006;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 179534837 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.629;LDAF=0.0097;AVGPOST=0.9944;RSQ=0.7716;ERATE=0.0007;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179534891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.493;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3860;ERATE=0.0005;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179534950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0126;AVGPOST=0.9967;RSQ=0.8884;ERATE=0.0003;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179534952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3973;AVGPOST=0.9953;RSQ=0.9923;ERATE=0.0008;THETA=0.0035;AC=869;AN=2184 GT:DS:GL:BD 0.39789379 0
1 179534989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0040;AVGPOST=0.9978;RSQ=0.7764;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179535169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.6802;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179535216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.970;LDAF=0.2879;AVGPOST=0.9908;RSQ=0.9828;ERATE=0.0005;THETA=0.0005;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 179535273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.545;LDAF=0.0080;AVGPOST=0.9923;RSQ=0.5983;ERATE=0.0009;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179535595 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.840;LDAF=0.0155;AVGPOST=0.9985;RSQ=0.9577;ERATE=0.0005;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179535602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5229;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179535720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1240;AVGPOST=0.9947;RSQ=0.9804;ERATE=0.0006;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 179535774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6193;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179535957 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.811;LDAF=0.0165;AVGPOST=0.9977;RSQ=0.9435;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 179535959 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5345;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179536025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7224;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179536133 . T TG 26357 PASS INDEL;BAVGPOST=0.986;BRSQ=0.968;LDAF=0.2859;AVGPOST=0.9733;RSQ=0.9520;ERATE=0.0031;THETA=0.0002;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 179536197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9074;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179536206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1447;AVGPOST=0.9987;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 179536376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9869;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179536416 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6119;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179536419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5338;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179536579 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.650;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7148;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179536676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0144;AVGPOST=0.9965;RSQ=0.8964;ERATE=0.0007;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 179536713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179536755 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0208;AVGPOST=0.9992;RSQ=0.9825;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179536757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179536849 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0108;AVGPOST=0.9986;RSQ=0.9446;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179536975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1473;AVGPOST=0.9973;RSQ=0.9911;ERATE=0.0006;THETA=0.0006;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179537060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1468;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179537084 . A AG 48 PASS INDEL;BAVGPOST=0.998;BRSQ=0.679;LDAF=0.0048;AVGPOST=0.9951;RSQ=0.6360;ERATE=0.0012;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179537188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7687;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179537219 . GA G 393 PASS INDEL;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0060;AVGPOST=0.9990;RSQ=0.9224;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179537258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0074;AVGPOST=0.9939;RSQ=0.6789;ERATE=0.0007;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179537284 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.967;LDAF=0.1142;AVGPOST=0.9967;RSQ=0.9876;ERATE=0.0005;THETA=0.0006;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 179537296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.944;LDAF=0.0244;AVGPOST=0.9981;RSQ=0.9725;ERATE=0.0003;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179537338 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.2345;AVGPOST=0.9940;RSQ=0.9876;ERATE=0.0005;THETA=0.0005;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 179537475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.553;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7298;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179537545 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9315;ERATE=0.0003;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179537603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5181;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179537710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1477;AVGPOST=0.9975;RSQ=0.9917;ERATE=0.0006;THETA=0.0005;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 179537714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.952;LDAF=0.2129;AVGPOST=0.9914;RSQ=0.9779;ERATE=0.0007;THETA=0.0005;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 179537860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.8906;AVGPOST=0.9839;RSQ=0.9440;ERATE=0.0031;THETA=0.0002;AC=1954;AN=2184 GT:DS:GL:BD 0.89468867 1
1 179537963 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7932;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179537993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0106;AVGPOST=0.9987;RSQ=0.9483;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179538017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1486;AVGPOST=0.9963;RSQ=0.9870;ERATE=0.0008;THETA=0.0003;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 179538201 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1466;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 179538285 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179538412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0025;AVGPOST=0.9962;RSQ=0.4248;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179538455 . C CGCT 54 PASS INDEL;BAVGPOST=0.980;BRSQ=0.317;LDAF=0.0211;AVGPOST=0.9761;RSQ=0.5344;ERATE=0.0016;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179538460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.380;LDAF=0.1145;AVGPOST=0.8569;RSQ=0.4326;ERATE=0.0173;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 179538463 . T TCTTTGTTGG 13459 PASS INDEL;BAVGPOST=0.553;BRSQ=0.334;LDAF=0.5327;AVGPOST=0.6794;RSQ=0.4970;ERATE=0.0364;THETA=0.0003;AC=1192;AN=2184 GT:DS:GL:BD 0.54578757 1
1 179538464 . C CT 1190 PASS INDEL;BAVGPOST=0.604;BRSQ=0.265;LDAF=0.3526;AVGPOST=0.6652;RSQ=0.3863;ERATE=0.0406;THETA=0.0003;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 179538506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.927;LDAF=0.1996;AVGPOST=0.9707;RSQ=0.9322;ERATE=0.0066;THETA=0.0013;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 179538607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5471;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179538617 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9869;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179538631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.974;LDAF=0.2123;AVGPOST=0.9942;RSQ=0.9851;ERATE=0.0006;THETA=0.0019;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 179538659 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179538697 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5418;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179538874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179538893 . AT A 108 PASS INDEL;BAVGPOST=0.995;BRSQ=0.707;LDAF=0.0161;AVGPOST=0.9855;RSQ=0.6330;ERATE=0.0051;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179538899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179539025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0448;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0002;THETA=0.0005;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 179539042 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9315;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179539104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4698;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179539235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1576;AVGPOST=0.9957;RSQ=0.9885;ERATE=0.0005;THETA=0.0003;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 179539283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179539347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9934;ERATE=0.0002;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179539439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9147;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179539478 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0259;AVGPOST=0.9994;RSQ=0.9916;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179539553 . T TG 93 PASS INDEL;BAVGPOST=0.998;BRSQ=0.711;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.7913;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179539630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6094;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179539730 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7641;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179539740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5293;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179539851 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9923;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179540007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0165;AVGPOST=0.9988;RSQ=0.9705;ERATE=0.0002;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179540140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0045;AVGPOST=0.9974;RSQ=0.7772;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179540144 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179540203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179540219 . CTCCA C 195 PASS INDEL;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5862;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179540321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1422;AVGPOST=0.9979;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 179540359 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0124;AVGPOST=0.9987;RSQ=0.9574;ERATE=0.0003;THETA=0.0040;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179540386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3637;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0004;THETA=0.0008;AC=797;AN=2184 GT:DS:GL:BD 0.36492673 0
1 179540441 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5920;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179540506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0873;AVGPOST=0.9986;RSQ=0.9930;ERATE=0.0004;THETA=0.0003;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 179540526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.554;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5448;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179540596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.952;LDAF=0.1476;AVGPOST=0.9764;RSQ=0.9319;ERATE=0.0004;THETA=0.0006;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 179540623 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.512;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6913;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179540636 . TC T 74 PASS INDEL;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7753;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179540678 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0169;AVGPOST=0.9982;RSQ=0.9604;ERATE=0.0004;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179540722 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0272;AVGPOST=0.9984;RSQ=0.9741;ERATE=0.0005;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179540834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0072;AVGPOST=0.9986;RSQ=0.9117;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179540856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5491;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179540857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179540897 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179540910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9251;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179540918 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179540930 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0190;AVGPOST=0.9891;RSQ=0.7724;ERATE=0.0013;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179540990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179541141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0345;AVGPOST=0.9990;RSQ=0.9877;ERATE=0.0002;THETA=0.0002;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 179541175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3984;AVGPOST=0.9966;RSQ=0.9941;ERATE=0.0007;THETA=0.0011;AC=872;AN=2184 GT:DS:GL:BD 0.39926741 0
1 179541297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8015;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179541339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8800;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179541421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179541441 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0774;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 179541486 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2097;AVGPOST=0.9968;RSQ=0.9918;ERATE=0.0008;THETA=0.0003;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 179541694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.833;LDAF=0.0094;AVGPOST=0.9968;RSQ=0.8670;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179541741 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1234;AVGPOST=0.9984;RSQ=0.9936;ERATE=0.0003;THETA=0.0023;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 179541824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179541858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179541860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179541938 . C CCTT 401 PASS INDEL;BAVGPOST=0.997;BRSQ=0.832;LDAF=0.0084;AVGPOST=0.9980;RSQ=0.9024;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179542206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6324;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179542302 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7010;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179542486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.1245;AVGPOST=0.9962;RSQ=0.9886;ERATE=0.0003;THETA=0.0004;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 179542493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179542549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.858;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.8905;ERATE=0.0002;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179542602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.977;LDAF=0.2944;AVGPOST=0.9913;RSQ=0.9843;ERATE=0.0013;THETA=0.0003;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 179542661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0169;AVGPOST=0.9989;RSQ=0.9764;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179542770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6729;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179542912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6952;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179542956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0159;AVGPOST=0.9992;RSQ=0.9814;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179543125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0002;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179543166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5432;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179543175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.841;LDAF=0.0070;AVGPOST=0.9979;RSQ=0.9138;ERATE=0.0003;THETA=0.0047;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179543398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179543438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179543588 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0404;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 179543635 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179543676 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9423;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179543725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0088;AVGPOST=0.9990;RSQ=0.9544;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179543834 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.922;LDAF=0.0248;AVGPOST=0.9971;RSQ=0.9546;ERATE=0.0004;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 179543840 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9732;ERATE=0.0003;THETA=0.0015;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179543872 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.8073;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179544155 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9390;AVGPOST=0.9994;RSQ=0.9956;ERATE=0.0003;THETA=0.0014;AC=2051;AN=2184 GT:DS:GL:BD 0.93910259 1
1 179544194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179544253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5293;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179544254 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9533;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179544315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0063;AVGPOST=0.9996;RSQ=0.9715;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179544325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9806;ERATE=0.0002;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 179544588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179544818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9505;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179544898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.966;LDAF=0.9362;AVGPOST=0.9930;RSQ=0.9567;ERATE=0.0008;THETA=0.0010;AC=2049;AN=2184 GT:DS:GL:BD 0.93818682 1
1 179544913 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.458;LDAF=0.0035;AVGPOST=0.9964;RSQ=0.5222;ERATE=0.0012;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179544941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.535;LDAF=0.0116;AVGPOST=0.9862;RSQ=0.5412;ERATE=0.0013;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179544976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0026;AVGPOST=0.9963;RSQ=0.4824;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179545025 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.566;LDAF=0.0053;AVGPOST=0.9950;RSQ=0.6097;ERATE=0.0007;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179545050 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1960;AVGPOST=0.9904;RSQ=0.9758;ERATE=0.0013;THETA=0.0004;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 179545051 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.959;LDAF=0.0472;AVGPOST=0.9956;RSQ=0.9626;ERATE=0.0008;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 179545115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.972;LDAF=0.3008;AVGPOST=0.9320;RSQ=0.8792;ERATE=0.0057;THETA=0.0003;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 179545184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.833;LDAF=0.0281;AVGPOST=0.9804;RSQ=0.7293;ERATE=0.0028;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 179545327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6031;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179545435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179545439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179545459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179545484 . C CT 6214 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0426;AVGPOST=0.9979;RSQ=0.9824;ERATE=0.0005;THETA=0.0012;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 179545493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9965;RSQ=0.8086;ERATE=0.0004;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179545669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3409;AVGPOST=0.9966;RSQ=0.9936;ERATE=0.0005;THETA=0.0002;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 179545703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9287;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179545747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9953;ERATE=0.0002;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179545769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9599;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179545801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.8735;ERATE=0.0004;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179545857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5636;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179545979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6703;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179545999 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9390;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=2051;AN=2184 GT:DS:GL:BD 0.93910259 1
1 179546086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179546121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179546142 rs72049094 CAGAT C 423 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9251;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179546194 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0049;AVGPOST=0.9939;RSQ=0.5675;ERATE=0.0011;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179546285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9084;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179546375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9827;ERATE=0.0002;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179546440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9619;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179546477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9399;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179546483 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5066;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179546554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0221;AVGPOST=0.9990;RSQ=0.9818;ERATE=0.0003;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 179546592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.8143;ERATE=0.0002;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179546627 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1469;AVGPOST=0.9982;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 179546708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0433;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0002;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 179546809 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.8032;ERATE=0.0002;THETA=0.0060;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179546841 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9381;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179546846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8336;ERATE=0.0003;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179546980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7814;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179547168 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0283;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179547245 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7383;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179547342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9754;ERATE=0.0002;THETA=0.0043;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179547591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179547656 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9750;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179547750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9395;AVGPOST=0.9989;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=2052;AN=2184 GT:DS:GL:BD 0.93956041 1
1 179547782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0310;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0002;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 179547810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9671;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179547833 . CCTAA C 488 PASS INDEL;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0056;AVGPOST=0.9969;RSQ=0.7922;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179547888 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179547906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179547940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9417;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179547993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179548036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0138;AVGPOST=0.9975;RSQ=0.9315;ERATE=0.0002;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179548106 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179548120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0201;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0002;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 179548191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0085;AVGPOST=0.9986;RSQ=0.9391;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179548203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8790;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179548211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179548212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.9088;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179548245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179548267 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3056;AVGPOST=0.9966;RSQ=0.9940;ERATE=0.0005;THETA=0.0003;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 179548291 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1442;AVGPOST=0.9982;RSQ=0.9944;ERATE=0.0004;THETA=0.0004;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 179548310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0280;AVGPOST=0.9990;RSQ=0.9856;ERATE=0.0007;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 179548346 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6856;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179548368 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179548378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9081;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179548457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0042;AVGPOST=0.9962;RSQ=0.6625;ERATE=0.0011;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179548467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8599;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179548569 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9998;RSQ=0.9930;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179548628 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179548750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0061;AVGPOST=0.9952;RSQ=0.6831;ERATE=0.0007;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179548808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0125;AVGPOST=0.9982;RSQ=0.9445;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179548875 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0241;AVGPOST=0.9975;RSQ=0.9667;ERATE=0.0004;THETA=0.0061;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179548878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0299;AVGPOST=0.9984;RSQ=0.9782;ERATE=0.0004;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179548991 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0880;AVGPOST=0.9955;RSQ=0.9809;ERATE=0.0005;THETA=0.0006;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 179548997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.566;LDAF=0.0029;AVGPOST=0.9963;RSQ=0.4947;ERATE=0.0008;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179549033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.951;LDAF=0.0296;AVGPOST=0.9964;RSQ=0.9528;ERATE=0.0005;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179549130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 179549157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9468;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179549240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179549300 . AG A 81 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4827;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179549329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179549370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7847;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179549389 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179549478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0231;AVGPOST=0.9989;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 179549577 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7078;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179549586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.970;LDAF=0.2964;AVGPOST=0.9895;RSQ=0.9791;ERATE=0.0012;THETA=0.0003;AC=648;AN=2184 GT:DS:GL:BD 0.29670331 0
1 179549618 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9193;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179549727 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9250;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179549829 . A AG 172 PASS INDEL;BAVGPOST=0.998;BRSQ=0.610;LDAF=0.0027;AVGPOST=0.9962;RSQ=0.4067;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179549881 . TC T 502 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9986;RSQ=0.8924;ERATE=0.0003;THETA=0.0034;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179549980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3685;AVGPOST=0.9966;RSQ=0.9941;ERATE=0.0003;THETA=0.0008;AC=804;AN=2184 GT:DS:GL:BD 0.36813188 0
1 179550022 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9235;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179550256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6442;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179550290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1392;AVGPOST=0.9968;RSQ=0.9920;ERATE=0.0005;THETA=0.0005;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 179550297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6446;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179550374 . TAAAG T 3175 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0284;AVGPOST=0.9993;RSQ=0.9885;ERATE=0.0004;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179550378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0761;AVGPOST=0.9980;RSQ=0.9907;ERATE=0.0004;THETA=0.0002;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179550488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0356;AVGPOST=0.9989;RSQ=0.9855;ERATE=0.0005;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 179550491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6430;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179550504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.701;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8570;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179550516 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.8040;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179550559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0033;AVGPOST=0.9962;RSQ=0.5058;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179550606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.961;LDAF=0.1181;AVGPOST=0.9942;RSQ=0.9828;ERATE=0.0004;THETA=0.0002;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 179550615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0082;AVGPOST=0.9982;RSQ=0.9185;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179550670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0169;AVGPOST=0.9981;RSQ=0.9473;ERATE=0.0005;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 179550712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0037;AVGPOST=0.9961;RSQ=0.5379;ERATE=0.0007;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179550719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0108;AVGPOST=0.9963;RSQ=0.8719;ERATE=0.0005;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179550758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5072;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179551214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0286;AVGPOST=0.9994;RSQ=0.9900;ERATE=0.0004;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179551236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5817;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179551237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179551381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7949;AVGPOST=0.9975;RSQ=0.9938;ERATE=0.0005;THETA=0.0006;AC=1737;AN=2184 GT:DS:GL:BD 0.79532969 1
1 179551522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0284;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0004;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179551533 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8614;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179551546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0199;AVGPOST=0.9994;RSQ=0.9893;ERATE=0.0002;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 179551599 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9888;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179551637 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179551652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3793;AVGPOST=0.9966;RSQ=0.9944;ERATE=0.0005;THETA=0.0001;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 179551687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0286;AVGPOST=0.9981;RSQ=0.9761;ERATE=0.0004;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179551924 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0041;AVGPOST=0.9976;RSQ=0.7700;ERATE=0.0002;THETA=0.0038;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179551944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1118;AVGPOST=0.9961;RSQ=0.9852;ERATE=0.0004;THETA=0.0003;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 179552104 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0882;AVGPOST=0.9984;RSQ=0.9938;ERATE=0.0003;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 179552233 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4651;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179552298 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0284;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0002;THETA=0.0038;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179552359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179552421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9903;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 179552550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0284;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0002;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179552577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179552825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0002;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179553046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0302;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0002;THETA=0.0009;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 179553151 . CAGA C 242 PASS INDEL;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0046;AVGPOST=0.9985;RSQ=0.8839;ERATE=0.0005;THETA=0.0025;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179553288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179553426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1508;AVGPOST=0.9936;RSQ=0.9808;ERATE=0.0008;THETA=0.0001;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 179553485 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0069;AVGPOST=0.9949;RSQ=0.7384;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179553590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0180;AVGPOST=0.9985;RSQ=0.9704;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179553689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9649;ERATE=0.0003;THETA=0.0061;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179553724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7970;AVGPOST=0.9967;RSQ=0.9919;ERATE=0.0005;THETA=0.0002;AC=1740;AN=2184 GT:DS:GL:BD 0.79670328 1
1 179553756 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0256;AVGPOST=0.9996;RSQ=0.9943;ERATE=0.0003;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179553808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179553872 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0416;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0002;THETA=0.0006;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 179553980 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179554228 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0461;AVGPOST=0.9992;RSQ=0.9930;ERATE=0.0002;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 179554311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0206;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 179554331 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179554508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179554533 . AAT A 1318 PASS INDEL;BAVGPOST=0.963;BRSQ=0.853;LDAF=0.1377;AVGPOST=0.9759;RSQ=0.9241;ERATE=0.0005;THETA=0.0003;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 179554536 . ATATTT A 27609 PASS INDEL;BAVGPOST=0.989;BRSQ=0.968;LDAF=0.1478;AVGPOST=0.9875;RSQ=0.9615;ERATE=0.0008;THETA=0.0002;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 179554608 . T TA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.4919;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179554676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8637;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179555074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8745;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179555122 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4671;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179555153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5722;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179555245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4514;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179555365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1631;AVGPOST=0.9755;RSQ=0.9367;ERATE=0.0015;THETA=0.0003;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 179555385 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.972;LDAF=0.1533;AVGPOST=0.9931;RSQ=0.9788;ERATE=0.0008;THETA=0.0003;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 179555431 . CGCTCGGAGCTCGGA C 353 PASS INDEL;BAVGPOST=0.983;BRSQ=0.472;LDAF=0.0282;AVGPOST=0.9854;RSQ=0.7972;ERATE=0.0009;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 179555486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.900;LDAF=0.0712;AVGPOST=0.9732;RSQ=0.8404;ERATE=0.0017;THETA=0.0006;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 179555576 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.430;LDAF=0.0216;AVGPOST=0.9739;RSQ=0.5155;ERATE=0.0022;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179555619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.899;LDAF=0.0204;AVGPOST=0.9829;RSQ=0.6588;ERATE=0.0010;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179555885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179555947 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5631;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0002;AC=1229;AN=2184 GT:DS:GL:BD 0.56272894 1
1 179556058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179556135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0443;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 179556163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179556174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1522;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 179556289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179556306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9972;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0003;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 179556357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9756;ERATE=0.0009;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179556507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179556562 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179556654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179556766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179556848 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1522;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0012;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 179556859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179556891 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179556898 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179556925 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179556944 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179557130 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1825;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0002;THETA=0.0010;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 179557476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9406;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179557502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.1698;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179557845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179557907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8463;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179557955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179558051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2970;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0002;THETA=0.0001;AC=648;AN=2184 GT:DS:GL:BD 0.29670331 0
1 179558394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7890;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179558699 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0102;AVGPOST=0.9994;RSQ=0.9740;ERATE=0.0003;THETA=0.0014;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179558801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3656;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 179558962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.6086;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179559156 . G GA 18 PASS INDEL;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5447;ERATE=0.0005;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179559166 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9570;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179559456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9391;AVGPOST=0.9979;RSQ=0.9858;ERATE=0.0004;THETA=0.0006;AC=2053;AN=2184 GT:DS:GL:BD 0.94001830 1
1 179559508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8008;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179559632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5971;AVGPOST=0.9980;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=1302;AN=2184 GT:DS:GL:BD 0.59615386 1
1 179559802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0104;AVGPOST=0.9983;RSQ=0.9277;ERATE=0.0006;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179559856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0418;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 179559966 . TAGTC T 19560 PASS INDEL;BAVGPOST=0.982;BRSQ=0.951;LDAF=0.2176;AVGPOST=0.9953;RSQ=0.9896;ERATE=0.0006;THETA=0.0003;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 179560154 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5364;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0006;THETA=0.0003;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 179560207 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0102;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0011;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179560213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6608;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179560238 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179560352 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179560517 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179560624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9243;AVGPOST=0.9987;RSQ=0.9927;ERATE=0.0005;THETA=0.0004;AC=2019;AN=2184 GT:DS:GL:BD 0.92445058 1
1 179560689 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0082;AVGPOST=0.9967;RSQ=0.8611;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179560718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.3000;AVGPOST=0.9958;RSQ=0.9917;ERATE=0.0007;THETA=0.0009;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 179560820 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.483;LDAF=0.0085;AVGPOST=0.9879;RSQ=0.4808;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179561017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0157;AVGPOST=0.9931;RSQ=0.8208;ERATE=0.0007;THETA=0.0038;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 179561021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.569;LDAF=0.0028;AVGPOST=0.9953;RSQ=0.2572;ERATE=0.0011;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179561154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.3045;AVGPOST=0.9926;RSQ=0.9852;ERATE=0.0012;THETA=0.0004;AC=664;AN=2184 GT:DS:GL:BD 0.30402932 0
1 179561369 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.625;LDAF=0.0048;AVGPOST=0.9948;RSQ=0.5466;ERATE=0.0009;THETA=0.0019;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179561382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.456;LDAF=0.0047;AVGPOST=0.9937;RSQ=0.4608;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179561424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7511;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179561432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179561527 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2302;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 179561601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179561609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0274;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0002;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 179561645 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7711;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0002;THETA=0.0005;AC=1684;AN=2184 GT:DS:GL:BD 0.77106225 1
1 179561650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179561683 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.972;LDAF=0.6673;AVGPOST=0.9840;RSQ=0.9672;ERATE=0.0609;THETA=0.0005;AC=1463;AN=2184 GT:DS:GL:BD 0.66987181 1
1 179561901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179561907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179562008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7588;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179562069 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179562143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7165;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0002;THETA=0.0003;AC=1565;AN=2184 GT:DS:GL:BD 0.71657509 1
1 179562181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9499;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179562183 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9463;ERATE=0.0003;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179562471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179562520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0401;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0002;THETA=0.0002;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 179562529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179562673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179562707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0594;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 179562740 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3323;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0002;THETA=0.0005;AC=725;AN=2184 GT:DS:GL:BD 0.33195969 0
1 179562792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0515;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 179562797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179562885 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179563033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0612;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 179563041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0283;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179563058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0613;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0002;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 179563096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179563152 rs11352554 GT G 7636 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0615;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 179563220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0239;AVGPOST=0.9976;RSQ=0.9642;ERATE=0.0003;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 179563300 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7937;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179563392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179563546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9543;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179563598 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9807;ERATE=0.0002;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179563599 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9783;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179563625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0095;AVGPOST=0.9997;RSQ=0.9852;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179563683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179563695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179563717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9137;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=1995;AN=2184 GT:DS:GL:BD 0.91346157 1
1 179563727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9997;RSQ=0.9954;ERATE=0.0002;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179563801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9647;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179563830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179563876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7770;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179563923 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179564073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9456;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179564082 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.9044;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179564144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6715;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=1466;AN=2184 GT:DS:GL:BD 0.67124540 1
1 179564171 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0611;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 179564194 . G GT 1651 PASS INDEL;BAVGPOST=0.975;BRSQ=0.711;LDAF=0.0667;AVGPOST=0.9385;RSQ=0.5969;ERATE=0.0199;THETA=0.0002;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 179564271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7980;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179564292 . TC T 31 PASS INDEL;BAVGPOST=0.976;BRSQ=0.078;LDAF=0.0341;AVGPOST=0.9522;RSQ=0.4488;ERATE=0.0016;THETA=0.0001;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179564294 . CA C 627 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179564296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7274;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179564364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9934;ERATE=0.0003;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179564438 . C CT 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8829;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179564556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0572;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0002;THETA=0.0005;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 179564619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0612;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0002;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 179564631 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179564696 . GC G 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.5157;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179564821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179564833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179564837 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179564849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179564885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179564900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179565080 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0494;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0002;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 179565086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179565192 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9501;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179565301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7946;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179565387 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5305;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179565480 . T TA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179565523 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0066;AVGPOST=0.9985;RSQ=0.9115;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179565564 . TA T 1055 PASS INDEL;BAVGPOST=0.996;BRSQ=0.849;LDAF=0.0157;AVGPOST=0.9934;RSQ=0.8499;ERATE=0.0004;THETA=0.0012;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179565592 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2470;AVGPOST=0.9948;RSQ=0.9901;ERATE=0.0004;THETA=0.0009;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 179565608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9576;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179565733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0026;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179565828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0612;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0001;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 179565851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0198;AVGPOST=0.9996;RSQ=0.9903;ERATE=0.0002;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 179566096 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9934;ERATE=0.0002;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179566109 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5693;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179566118 . AT A 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179566142 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9550;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179566144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0062;AVGPOST=0.9986;RSQ=0.9122;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179566153 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7311;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179566231 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9997;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179566247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8993;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179566296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.2480;AVGPOST=0.9955;RSQ=0.9906;ERATE=0.0008;THETA=0.0002;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 179566442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9159;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179566535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0172;AVGPOST=0.9993;RSQ=0.9818;ERATE=0.0004;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179566548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7638;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179566554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0262;AVGPOST=0.9979;RSQ=0.9666;ERATE=0.0008;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179566680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.961;LDAF=0.0625;AVGPOST=0.9957;RSQ=0.9744;ERATE=0.0006;THETA=0.0003;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 179566745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0291;AVGPOST=0.9995;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179566766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0110;AVGPOST=0.9977;RSQ=0.9170;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179566806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6410;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179566829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0613;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 179566848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3666;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=799;AN=2184 GT:DS:GL:BD 0.36584249 0
1 179566969 . T TCAAA 9980 PASS INDEL;BAVGPOST=0.991;BRSQ=0.924;LDAF=0.0576;AVGPOST=0.9968;RSQ=0.9773;ERATE=0.0004;THETA=0.0004;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 179566971 . C CTATTG 9519 PASS INDEL;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0604;AVGPOST=0.9975;RSQ=0.9843;ERATE=0.0004;THETA=0.0002;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 179566972 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0256;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0002;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179567064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.941;LDAF=0.0647;AVGPOST=0.9934;RSQ=0.9646;ERATE=0.0004;THETA=0.0002;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 179567082 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0612;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 179567177 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179567334 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0366;AVGPOST=0.9995;RSQ=0.9931;ERATE=0.0002;THETA=0.0012;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 179567347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179567455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179567469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0481;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 179567547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9370;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179567580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0002;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179567626 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0060;AVGPOST=0.9994;RSQ=0.9513;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179567696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0285;AVGPOST=0.9995;RSQ=0.9922;ERATE=0.0002;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179567711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8265;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179567793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0029;AVGPOST=0.9963;RSQ=0.4951;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179567797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9377;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179567803 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0182;AVGPOST=0.9988;RSQ=0.9714;ERATE=0.0005;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179567987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8178;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179568216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179568264 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.966;LDAF=0.7603;AVGPOST=0.9665;RSQ=0.9296;ERATE=0.0091;THETA=0.0003;AC=1677;AN=2184 GT:DS:GL:BD 0.76785713 1
1 179568336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6802;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179568546 . G GT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6940;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179568573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0197;AVGPOST=0.9995;RSQ=0.9872;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 179568587 . T TTGGGCC 11041 PASS INDEL;BAVGPOST=0.990;BRSQ=0.921;LDAF=0.0583;AVGPOST=0.9956;RSQ=0.9718;ERATE=0.0004;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 179568662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0002;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179568683 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.963;LDAF=0.2508;AVGPOST=0.9790;RSQ=0.9584;ERATE=0.0056;THETA=0.0004;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 179568761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8194;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179568774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179568815 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0284;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179568829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9140;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=1996;AN=2184 GT:DS:GL:BD 0.91391939 1
1 179569003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179569006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0613;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0002;THETA=0.0005;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 179569062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0193;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179569088 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6745;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0004;THETA=0.0020;AC=1474;AN=2184 GT:DS:GL:BD 0.67490840 1
1 179569147 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6615;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179569167 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179569181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0119;AVGPOST=0.9979;RSQ=0.9242;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 179569228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8202;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179569341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.658;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7356;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179569349 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.1352;AVGPOST=0.9987;RSQ=0.9955;ERATE=0.0002;THETA=0.0004;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 179569481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7785;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179569484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179569722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3249;AVGPOST=0.9968;RSQ=0.9940;ERATE=0.0005;THETA=0.0003;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 179569798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5799;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179569874 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8613;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179569881 . A AT 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6750;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179569921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179570172 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6447;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179570252 . G GT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179570275 . A ACT 44351 PASS INDEL;BAVGPOST=0.983;BRSQ=0.961;LDAF=0.7284;AVGPOST=0.9859;RSQ=0.9739;ERATE=0.0005;THETA=0.0002;AC=1595;AN=2184 GT:DS:GL:BD 0.73031133 1
1 179570276 rs60888896 C CTG 103564 PASS INDEL;BAVGPOST=0.983;BRSQ=0.961;LDAF=0.7282;AVGPOST=0.9865;RSQ=0.9749;ERATE=0.0004;THETA=0.0002;AC=1593;AN=2184 GT:DS:GL:BD 0.72939563 1
1 179570277 . T TG 33090 PASS INDEL;BAVGPOST=0.970;BRSQ=0.934;LDAF=0.7242;AVGPOST=0.9735;RSQ=0.9515;ERATE=0.0025;THETA=0.0005;AC=1588;AN=2184 GT:DS:GL:BD 0.72710621 1
1 179570589 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0395;AVGPOST=0.9984;RSQ=0.9841;ERATE=0.0003;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 179570600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179570617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0220;AVGPOST=0.9995;RSQ=0.9908;ERATE=0.0003;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 179570790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.920;LDAF=0.0197;AVGPOST=0.9961;RSQ=0.9293;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179570858 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9140;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0002;THETA=0.0010;AC=1996;AN=2184 GT:DS:GL:BD 0.91391939 1
1 179570885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179570916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8919;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179570963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0958;AVGPOST=0.9976;RSQ=0.9894;ERATE=0.0003;THETA=0.0002;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 179570980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.562;LDAF=0.0029;AVGPOST=0.9959;RSQ=0.4062;ERATE=0.0011;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179571053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7681;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179571066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.944;LDAF=0.1103;AVGPOST=0.9778;RSQ=0.9118;ERATE=0.0049;THETA=0.0003;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 179571098 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0287;AVGPOST=0.9990;RSQ=0.9850;ERATE=0.0004;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179571130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8323;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179571209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7692;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179571336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179571375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6588;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179571404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8776;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179571505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179571530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179571862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.862;LDAF=0.0277;AVGPOST=0.9940;RSQ=0.9171;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179571916 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9411;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179571967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7347;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179572070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8199;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179572086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2564;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 179572130 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0212;AVGPOST=0.9994;RSQ=0.9874;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 179572234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0051;AVGPOST=0.9969;RSQ=0.7317;ERATE=0.0009;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179572242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0216;AVGPOST=0.9988;RSQ=0.9823;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 179572249 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8118;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179572308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8891;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179572353 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0259;AVGPOST=0.9993;RSQ=0.9907;ERATE=0.0002;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 179572504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2564;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 179572589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179572590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8793;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179572676 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0895;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0002;THETA=0.0002;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 179572693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0904;AVGPOST=0.9981;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 179572694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7718;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179572697 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0071;AVGPOST=0.9951;RSQ=0.7444;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179572714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5424;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179572901 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0599;AVGPOST=0.9994;RSQ=0.9949;ERATE=0.0003;THETA=0.0007;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 179572959 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7015;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179573117 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179573130 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3550;AVGPOST=0.9966;RSQ=0.9936;ERATE=0.0004;THETA=0.0005;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 179573431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9667;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179573433 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0894;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 179573472 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0141;AVGPOST=0.9986;RSQ=0.9594;ERATE=0.0002;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179573499 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179573628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0685;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0003;THETA=0.0010;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 179573709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179573891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.791;LDAF=0.0114;AVGPOST=0.9957;RSQ=0.8403;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179573943 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6967;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179574007 . G GTA 128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3895;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179574060 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5516;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179574198 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9223;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179574203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179574261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0034;AVGPOST=0.9982;RSQ=0.7604;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179574275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0131;AVGPOST=0.9981;RSQ=0.9392;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179574281 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0158;AVGPOST=0.9985;RSQ=0.9660;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179574338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179574506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179574545 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5529;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179574638 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0002;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179574687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0878;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0002;THETA=0.0003;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 179574718 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179574853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8334;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179574901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0126;AVGPOST=0.9994;RSQ=0.9792;ERATE=0.0002;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179574943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.0880;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 179575070 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8509;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179575101 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0405;AVGPOST=0.9992;RSQ=0.9907;ERATE=0.0004;THETA=0.0002;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 179575206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7139;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179575218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179575275 rs80110193 A AG 10441 PASS INDEL;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0879;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 179575345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1364;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 179575359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8755;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179575369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0880;AVGPOST=0.9994;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 179575401 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8458;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179575421 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0153;AVGPOST=0.9984;RSQ=0.9590;ERATE=0.0005;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179575456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6981;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179575461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7530;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179575518 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0880;AVGPOST=0.9993;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 179575537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8710;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179575587 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0299;AVGPOST=0.9994;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 179575635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6545;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179575641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179575642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0878;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0002;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 179575782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2556;AVGPOST=0.9983;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 179575792 . G GT 580 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0069;AVGPOST=0.9982;RSQ=0.8953;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179575907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179575989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7052;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0001;AC=1540;AN=2184 GT:DS:GL:BD 0.70512819 1
1 179575997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179576117 . TGA T 981 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9994;RSQ=0.9836;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179576119 . AGAT A 4466 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9908;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179576159 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179576220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0059;AVGPOST=0.9978;RSQ=0.8628;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179576286 . A AT 357 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9148;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179576302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179576342 . AT A 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.4935;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179576357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7353;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179576372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179576406 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1364;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 179576430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1891;AVGPOST=0.9972;RSQ=0.9920;ERATE=0.0007;THETA=0.0005;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 179576581 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0880;AVGPOST=0.9993;RSQ=0.9961;ERATE=0.0004;THETA=0.0006;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 179576797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0880;AVGPOST=0.9994;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 179576830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0291;AVGPOST=0.9984;RSQ=0.9808;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179576852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3592;AVGPOST=0.9964;RSQ=0.9932;ERATE=0.0009;THETA=0.0005;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 179576887 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7386;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179576902 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0045;AVGPOST=0.9973;RSQ=0.7853;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179577069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0196;AVGPOST=0.9972;RSQ=0.9309;ERATE=0.0004;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179577149 . C CTATTTGTCA 2316 PASS INDEL;BAVGPOST=0.996;BRSQ=0.869;LDAF=0.0122;AVGPOST=0.9969;RSQ=0.9051;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179577157 . C CAT 278 PASS INDEL;BAVGPOST=0.995;BRSQ=0.792;LDAF=0.0119;AVGPOST=0.9968;RSQ=0.8969;ERATE=0.0003;THETA=0.0001;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179577187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8639;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179577240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0061;AVGPOST=0.9971;RSQ=0.8312;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179577281 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8157;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179577349 rs71675447 CTTTG C 1940 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0153;AVGPOST=0.9996;RSQ=0.9900;ERATE=0.0002;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179577396 . TTTC T 5975 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0304;AVGPOST=0.9995;RSQ=0.9924;ERATE=0.0004;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 179577403 rs76253149 AT A 5019 PASS INDEL;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0944;AVGPOST=0.9978;RSQ=0.9886;ERATE=0.0005;THETA=0.0004;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 179577437 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8637;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179577511 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7234;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179577529 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7405;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179577534 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179577555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0351;AVGPOST=0.9991;RSQ=0.9901;ERATE=0.0003;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 179577576 . A ACT 1917 PASS INDEL;BAVGPOST=0.987;BRSQ=0.915;LDAF=0.0892;AVGPOST=0.9969;RSQ=0.9826;ERATE=0.0008;THETA=0.0005;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 179577709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7457;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179577717 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179577788 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5874;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179577827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7222;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179577839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179577840 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7375;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179577870 rs11374180 G GT 4987 PASS INDEL;BAVGPOST=0.954;BRSQ=0.811;LDAF=0.1526;AVGPOST=0.9154;RSQ=0.7314;ERATE=0.0356;THETA=0.0002;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 179577987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6173;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=1348;AN=2184 GT:DS:GL:BD 0.61721611 1
1 179578067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7513;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179578084 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0226;AVGPOST=0.9980;RSQ=0.9679;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 179578129 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1735;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 179578146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8783;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179578176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179578182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179578226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.927;LDAF=0.0297;AVGPOST=0.9984;RSQ=0.9808;ERATE=0.0002;THETA=0.0001;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 179578323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0148;AVGPOST=0.9987;RSQ=0.9645;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179578434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0049;AVGPOST=0.9977;RSQ=0.8261;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179578640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.916;LDAF=0.0198;AVGPOST=0.9983;RSQ=0.9684;ERATE=0.0002;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 179578811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9710;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179578881 . TGA T 460 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6164;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179578885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0932;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0002;THETA=0.0003;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 179578953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6768;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179578977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179579038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0935;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0002;THETA=0.0007;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 179579052 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179579053 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179579068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179579072 . CAG C 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179579126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179579230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179579676 . C CT 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0035;AVGPOST=0.9967;RSQ=0.6297;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179579746 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179579753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0151;AVGPOST=0.9995;RSQ=0.9857;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179579795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179579911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5604;ERATE=0.0002;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179580004 . A AT 445 PASS INDEL;BAVGPOST=0.996;BRSQ=0.733;LDAF=0.0078;AVGPOST=0.9956;RSQ=0.7655;ERATE=0.0005;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179580070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0442;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 179580152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2558;AVGPOST=0.9978;RSQ=0.9953;ERATE=0.0003;THETA=0.0007;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 179580165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1365;AVGPOST=0.9978;RSQ=0.9924;ERATE=0.0004;THETA=0.0026;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 179580237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=0.9989;RSQ=0.9494;ERATE=0.0003;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179580248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0036;AVGPOST=0.9967;RSQ=0.6785;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179580332 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4611;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179580525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7710;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179580726 . C CA 2722 PASS INDEL;BAVGPOST=0.914;BRSQ=0.550;LDAF=0.1522;AVGPOST=0.8419;RSQ=0.5043;ERATE=0.0264;THETA=0.0002;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 179580743 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9130;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179580830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8537;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179580839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0002;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179580868 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8338;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179580886 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9614;ERATE=0.0002;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179580932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0285;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179581010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8018;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179581077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8594;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179581197 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5667;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179581216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.786;LDAF=0.0049;AVGPOST=0.9978;RSQ=0.8302;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179581370 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5967;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179581398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0177;AVGPOST=0.9988;RSQ=0.9670;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179581434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2549;AVGPOST=0.9942;RSQ=0.9876;ERATE=0.0010;THETA=0.0006;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 179581499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7132;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179581562 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8358;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179581710 . AG A 117 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7539;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179581759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0934;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 179581843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0051;AVGPOST=0.9985;RSQ=0.8696;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179581857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5809;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179581934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0934;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 179581975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7646;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179582020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0202;AVGPOST=0.9978;RSQ=0.9617;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179582022 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179582032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.963;LDAF=0.0925;AVGPOST=0.9985;RSQ=0.9917;ERATE=0.0005;THETA=0.0004;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 179582119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8720;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179582121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1305;AVGPOST=0.9975;RSQ=0.9914;ERATE=0.0004;THETA=0.0006;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 179582269 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179582340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5951;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179582378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7537;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179582680 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7074;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=1545;AN=2184 GT:DS:GL:BD 0.70741761 1
1 179582699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8983;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179582717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5664;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179582763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7563;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179582935 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.963;LDAF=0.2431;AVGPOST=0.9861;RSQ=0.9755;ERATE=0.0004;THETA=0.0003;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 179582936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.957;LDAF=0.1588;AVGPOST=0.9863;RSQ=0.9672;ERATE=0.0003;THETA=0.0004;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 179582955 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179582970 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179583083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0444;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0023;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 179583147 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9275;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179583165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7821;AVGPOST=0.9979;RSQ=0.9947;ERATE=0.0004;THETA=0.0004;AC=1709;AN=2184 GT:DS:GL:BD 0.78250915 1
1 179583268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179583388 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179583390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5671;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179583501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179583529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3253;AVGPOST=0.9977;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 179583662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8432;ERATE=0.0005;THETA=0.0044;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179583733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0044;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179583741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179583886 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0072;AVGPOST=0.9977;RSQ=0.8766;ERATE=0.0005;THETA=0.0054;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179583957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179584079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179584171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0142;AVGPOST=0.9989;RSQ=0.9695;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179584183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0704;AVGPOST=0.9971;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 179584305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6586;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179584311 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9154;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179584406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7177;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179584420 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9240;ERATE=0.0002;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179584428 . ATGAG A 3909 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0177;AVGPOST=0.9984;RSQ=0.9645;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 179584516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179584584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0288;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0002;THETA=0.0015;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179584618 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0755;AVGPOST=0.9989;RSQ=0.9937;ERATE=0.0005;THETA=0.0004;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179584643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0413;AVGPOST=0.9993;RSQ=0.9916;ERATE=0.0003;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179584665 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179584813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179584874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9462;ERATE=0.0003;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179585021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2209;AVGPOST=0.9968;RSQ=0.9932;ERATE=0.0007;THETA=0.0014;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 179585051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0755;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179585146 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0410;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0002;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 179585222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179585286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0290;AVGPOST=0.9996;RSQ=0.9944;ERATE=0.0003;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179585398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179585483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.9091;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179585494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8840;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179585580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7169;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179585780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179585780 . TA T 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179585830 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179586017 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179586314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3665;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 179586454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179586484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0054;AVGPOST=0.9996;RSQ=0.9698;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179586496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9402;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179586514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0262;AVGPOST=0.9996;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179586540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.8012;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179586783 . CTACTT C 119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5219;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179586784 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0754;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179586812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179587050 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3047;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0004;THETA=0.0006;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 179587127 . TC T 1392 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0095;AVGPOST=0.9993;RSQ=0.9675;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179587340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8921;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179587422 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9996;RSQ=0.9910;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179587429 . A AC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7044;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179587505 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0758;AVGPOST=0.9993;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179587569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0754;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0003;THETA=0.0003;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179587713 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179587716 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179587765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179587855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0016;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179587960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9872;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179587989 . A AT 55 PASS INDEL;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5033;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179588140 . ATG A 63 PASS INDEL;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0023;AVGPOST=0.9969;RSQ=0.3824;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179588226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7927;AVGPOST=0.9979;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=1731;AN=2184 GT:DS:GL:BD 0.79258239 1
1 179588525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0198;AVGPOST=0.9996;RSQ=0.9911;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 179588606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0190;AVGPOST=0.9995;RSQ=0.9876;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 179588697 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6903;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179588838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.9075;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179588877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179589245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0755;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179589264 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7258;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179589575 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0309;AVGPOST=0.9975;RSQ=0.9687;ERATE=0.0003;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 179589849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179589865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179589962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179590150 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179590323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179590352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1211;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 179590465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0755;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179590557 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9315;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179590608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179590643 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9990;RSQ=0.9873;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179590689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179590791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0114;AVGPOST=0.9981;RSQ=0.9287;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 179590802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9127;AVGPOST=0.9978;RSQ=0.9905;ERATE=0.0004;THETA=0.0003;AC=1992;AN=2184 GT:DS:GL:BD 0.91208792 1
1 179590929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9310;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179591015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8899;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179591066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0423;AVGPOST=0.9993;RSQ=0.9933;ERATE=0.0003;THETA=0.0014;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 179591408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0145;AVGPOST=0.9993;RSQ=0.9755;ERATE=0.0005;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179591414 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0425;AVGPOST=0.9990;RSQ=0.9897;ERATE=0.0004;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 179591537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8280;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179591573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179591782 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7349;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179591864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7027;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179591872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5263;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179592093 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179592219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5858;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179592235 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179592270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3304;AVGPOST=0.9975;RSQ=0.9955;ERATE=0.0006;THETA=0.0003;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 179592512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0293;AVGPOST=0.9988;RSQ=0.9840;ERATE=0.0003;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179592572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6392;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179592673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9485;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179592839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.5276;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179592846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0265;AVGPOST=0.9990;RSQ=0.9835;ERATE=0.0005;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179592937 rs34338309 T TA 17123 PASS INDEL;BAVGPOST=0.972;BRSQ=0.940;LDAF=0.3719;AVGPOST=0.9436;RSQ=0.9070;ERATE=0.0110;THETA=0.0005;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 179592987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179593065 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9859;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179593075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0090;AVGPOST=0.9978;RSQ=0.9073;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179593158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179593166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0755;AVGPOST=0.9994;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179593258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6678;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179593345 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4335;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179593364 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7778;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179593385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179593416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0032;AVGPOST=0.9967;RSQ=0.6594;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179593517 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179593566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0748;AVGPOST=0.9984;RSQ=0.9924;ERATE=0.0004;THETA=0.0005;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 179593568 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7594;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179593609 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7726;AVGPOST=0.9969;RSQ=0.9929;ERATE=0.0008;THETA=0.0003;AC=1689;AN=2184 GT:DS:GL:BD 0.77335167 1
1 179593708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5025;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179593719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179593790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0294;AVGPOST=0.9987;RSQ=0.9827;ERATE=0.0004;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179593810 . GT G 244 PASS INDEL;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8643;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179593841 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5576;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179593991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8778;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179594001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0041;AVGPOST=0.9977;RSQ=0.7916;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179594124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179594318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3780;AVGPOST=0.9976;RSQ=0.9952;ERATE=0.0008;THETA=0.0015;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 179594323 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0332;AVGPOST=0.9992;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 179594466 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179594703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0423;AVGPOST=0.9992;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 179594748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179594848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179594923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179594924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179594953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179594962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.924;LDAF=0.0258;AVGPOST=0.9934;RSQ=0.9113;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 179595047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.833;BRSQ=0.380;LDAF=0.1496;AVGPOST=0.8346;RSQ=0.5067;ERATE=0.0192;THETA=0.0002;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 179595058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.346;LDAF=0.0097;AVGPOST=0.9902;RSQ=0.5996;ERATE=0.0008;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179595357 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2599;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 179595369 . AAAG A 15218 PASS INDEL;BAVGPOST=0.974;BRSQ=0.910;LDAF=0.1529;AVGPOST=0.9799;RSQ=0.9424;ERATE=0.0007;THETA=0.0002;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 179595501 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4769;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179595524 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9995;RSQ=0.9861;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179595557 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179595572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179595588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.6417;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179595661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179595714 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9793;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179595745 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9289;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179595787 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179595811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.838;LDAF=0.0206;AVGPOST=0.9941;RSQ=0.8831;ERATE=0.0005;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 179595869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0758;AVGPOST=0.9988;RSQ=0.9933;ERATE=0.0004;THETA=0.0002;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179595898 rs74880726 A AG 6288 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0755;AVGPOST=0.9990;RSQ=0.9937;ERATE=0.0005;THETA=0.0002;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179596176 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=0.9993;RSQ=0.9370;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179596189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6134;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179596303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179596359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0172;AVGPOST=0.9993;RSQ=0.9832;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179596372 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179596420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0071;AVGPOST=0.9962;RSQ=0.7883;ERATE=0.0006;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179596518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8435;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179596575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0755;AVGPOST=0.9994;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179596606 . TTGG T 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179596639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179596703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179596729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7159;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179597114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7668;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179597231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7690;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179597238 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2626;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 179597263 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6027;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179597384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6906;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179597440 . ATTTCT A 17323 PASS INDEL;BAVGPOST=0.938;BRSQ=0.884;LDAF=0.4428;AVGPOST=0.9408;RSQ=0.9042;ERATE=0.0095;THETA=0.0004;AC=967;AN=2184 GT:DS:GL:BD 0.44276556 0
1 179597444 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.946;LDAF=0.2969;AVGPOST=0.9749;RSQ=0.9538;ERATE=0.0077;THETA=0.0005;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 179597455 . TTTTC T 17127 PASS INDEL;BAVGPOST=0.932;BRSQ=0.873;LDAF=0.4334;AVGPOST=0.8772;RSQ=0.8083;ERATE=0.0218;THETA=0.0003;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 179597459 rs60815418 CTT C 484 PASS INDEL;BAVGPOST=0.708;BRSQ=0.220;LDAF=0.2802;AVGPOST=0.6944;RSQ=0.3670;ERATE=0.0320;THETA=0.0005;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 179597530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9590;ERATE=0.0005;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179597601 . G GT 5841 PASS INDEL;BAVGPOST=0.878;BRSQ=0.756;LDAF=0.4645;AVGPOST=0.7691;RSQ=0.6119;ERATE=0.0592;THETA=0.0005;AC=957;AN=2184 GT:DS:GL:BD 0.43818682 0
1 179597605 . T TTC 11768 PASS INDEL;BAVGPOST=0.984;BRSQ=0.968;LDAF=0.3663;AVGPOST=0.9910;RSQ=0.9838;ERATE=0.0006;THETA=0.0003;AC=801;AN=2184 GT:DS:GL:BD 0.36675823 0
1 179597606 rs34416136 T TC 28923 PASS INDEL;BAVGPOST=0.984;BRSQ=0.967;LDAF=0.3673;AVGPOST=0.9918;RSQ=0.9853;ERATE=0.0006;THETA=0.0002;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 179597637 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9857;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179597741 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.532;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5736;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179597869 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4990;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179597913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8299;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179598008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6684;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179598044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179598179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2597;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0006;THETA=0.0006;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 179598219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7111;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179598299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6104;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179598561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0755;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179598590 rs10690842 C CAGAA 66975 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3704;AVGPOST=0.9849;RSQ=0.9736;ERATE=0.0034;THETA=0.0005;AC=803;AN=2184 GT:DS:GL:BD 0.36767399 0
1 179598632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7554;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179598763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1213;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 179598793 . CT C 485 PASS INDEL;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8707;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179598833 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8477;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179599012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179599052 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7831;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179599219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0265;AVGPOST=0.9991;RSQ=0.9855;ERATE=0.0004;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179599244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179599327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2607;AVGPOST=0.9954;RSQ=0.9905;ERATE=0.0008;THETA=0.0005;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 179599335 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9994;RSQ=0.9674;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179599365 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.903;LDAF=0.0745;AVGPOST=0.9985;RSQ=0.9907;ERATE=0.0004;THETA=0.0006;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 179599384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7370;ERATE=0.0010;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179599423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0759;AVGPOST=0.9981;RSQ=0.9897;ERATE=0.0004;THETA=0.0003;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179599516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0755;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179599524 . AT A 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6618;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179599529 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179599880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179599985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179600001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0754;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 179600042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0311;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 179600084 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179600173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179600210 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9581;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179600220 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7496;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179600264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0752;AVGPOST=0.9992;RSQ=0.9957;ERATE=0.0004;THETA=0.0007;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 179600309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9981;RSQ=0.9592;ERATE=0.0004;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 179600354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9987;RSQ=0.9495;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179600452 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.865;LDAF=0.0378;AVGPOST=0.9921;RSQ=0.9149;ERATE=0.0005;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 179600784 . C CGT 558 PASS INDEL;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0308;AVGPOST=0.9975;RSQ=0.9678;ERATE=0.0003;THETA=0.0008;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 179600785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0296;AVGPOST=0.9979;RSQ=0.9715;ERATE=0.0003;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 179600786 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0723;AVGPOST=0.9968;RSQ=0.9802;ERATE=0.0004;THETA=0.0004;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 179600788 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0719;AVGPOST=0.9969;RSQ=0.9810;ERATE=0.0005;THETA=0.0005;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 179600797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.8002;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179600992 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.873;LDAF=0.0676;AVGPOST=0.9868;RSQ=0.9219;ERATE=0.0026;THETA=0.0007;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 179601231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.964;LDAF=0.4430;AVGPOST=0.9477;RSQ=0.9151;ERATE=0.0104;THETA=0.0013;AC=971;AN=2184 GT:DS:GL:BD 0.44459707 0
1 179601250 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0100;AVGPOST=0.9981;RSQ=0.9169;ERATE=0.0005;THETA=0.0013;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179601287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.536;LDAF=0.0261;AVGPOST=0.9645;RSQ=0.4445;ERATE=0.0072;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 179601340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6936;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179601374 . G GA 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6217;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179601429 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.8121;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179601515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0061;AVGPOST=0.9979;RSQ=0.8587;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179601622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0097;AVGPOST=0.9989;RSQ=0.9648;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179601749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.3104;AVGPOST=0.9947;RSQ=0.9905;ERATE=0.0005;THETA=0.0002;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 179601750 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.4406;AVGPOST=0.9969;RSQ=0.9947;ERATE=0.0005;THETA=0.0045;AC=962;AN=2184 GT:DS:GL:BD 0.44047618 0
1 179601770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5942;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179601834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7276;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179601906 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0042;AVGPOST=0.9981;RSQ=0.7889;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179601909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179601911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4417;AVGPOST=0.9953;RSQ=0.9925;ERATE=0.0011;THETA=0.0005;AC=963;AN=2184 GT:DS:GL:BD 0.44093406 0
1 179602086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0290;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179602092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179602103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4500;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0005;THETA=0.0005;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 179602329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179602331 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9129;AVGPOST=0.9990;RSQ=0.9957;ERATE=0.0003;THETA=0.0006;AC=1994;AN=2184 GT:DS:GL:BD 0.91300368 1
1 179602413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179602508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0069;AVGPOST=0.9968;RSQ=0.7949;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179602517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0064;AVGPOST=0.9983;RSQ=0.8827;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179602589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.965;LDAF=0.3757;AVGPOST=0.9884;RSQ=0.9791;ERATE=0.0014;THETA=0.0004;AC=822;AN=2184 GT:DS:GL:BD 0.37637362 0
1 179602731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0200;AVGPOST=0.9955;RSQ=0.9008;ERATE=0.0007;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179602742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.461;LDAF=0.0047;AVGPOST=0.9963;RSQ=0.6428;ERATE=0.0008;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179602750 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9124;AVGPOST=0.9933;RSQ=0.9695;ERATE=0.0011;THETA=0.0003;AC=1999;AN=2184 GT:DS:GL:BD 0.91529304 1
1 179602871 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179602990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7624;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179603033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5848;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179603131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0205;AVGPOST=0.9960;RSQ=0.9174;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179603140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.487;LDAF=0.0041;AVGPOST=0.9928;RSQ=0.2971;ERATE=0.0012;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179603164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0280;AVGPOST=0.9978;RSQ=0.9696;ERATE=0.0004;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 179603196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.506;LDAF=0.0035;AVGPOST=0.9951;RSQ=0.4073;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179603238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8205;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179603254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5004;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179603260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.3282;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179603263 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.928;LDAF=0.0259;AVGPOST=0.9979;RSQ=0.9699;ERATE=0.0004;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179603264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0295;AVGPOST=0.9983;RSQ=0.9755;ERATE=0.0004;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179603287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.957;LDAF=0.9090;AVGPOST=0.9924;RSQ=0.9685;ERATE=0.0008;THETA=0.0002;AC=1988;AN=2184 GT:DS:GL:BD 0.91025639 1
1 179603299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.952;LDAF=0.8994;AVGPOST=0.9720;RSQ=0.8967;ERATE=0.0045;THETA=0.0003;AC=1984;AN=2184 GT:DS:GL:BD 0.90842491 1
1 179603311 . AC A 13173 PASS INDEL;BAVGPOST=0.962;BRSQ=0.929;LDAF=0.4227;AVGPOST=0.9436;RSQ=0.9163;ERATE=0.0084;THETA=0.0006;AC=946;AN=2184 GT:DS:GL:BD 0.43315017 0
1 179603433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179603528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9271;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179603575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179603622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179603735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179603811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0014;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179603825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179603943 . CT C 58 PASS INDEL;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3895;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179604199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0288;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179604367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1212;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 179604404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7676;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179604422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179604514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3828;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 179604515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0289;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0003;THETA=0.0006;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179604626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179604748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179604780 . A AT 41 PASS INDEL;BAVGPOST=0.982;BRSQ=0.433;LDAF=0.0312;AVGPOST=0.9567;RSQ=0.4326;ERATE=0.0100;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179604858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179604864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7935;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0012;THETA=0.0002;AC=1733;AN=2184 GT:DS:GL:BD 0.79349816 1
1 179604867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179604873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179604951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179604984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179604987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179604990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179605033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179605058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4544;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0003;THETA=0.0004;AC=992;AN=2184 GT:DS:GL:BD 0.45421246 0
1 179605088 . C CG 81 PASS INDEL;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4979;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179605116 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179605121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179605126 rs79154148 CT C 22127 PASS INDEL;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.3838;AVGPOST=0.9940;RSQ=0.9887;ERATE=0.0015;THETA=0.0004;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 179605188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0094;AVGPOST=0.9993;RSQ=0.9648;ERATE=0.0005;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179605509 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5004;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179605870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3792;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 179606012 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179606100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0138;AVGPOST=0.9989;RSQ=0.9687;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179606157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4531;AVGPOST=0.9975;RSQ=0.9959;ERATE=0.0012;THETA=0.0002;AC=989;AN=2184 GT:DS:GL:BD 0.45283884 0
1 179606176 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6087;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179606208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179606320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8052;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179606344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179606515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8586;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179606521 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0088;AVGPOST=0.9978;RSQ=0.9012;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179606595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9974;RSQ=0.9114;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179606661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0051;AVGPOST=0.9975;RSQ=0.8084;ERATE=0.0005;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179606694 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8065;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179606723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9928;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179606774 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7903;AVGPOST=0.9973;RSQ=0.9933;ERATE=0.0007;THETA=0.0003;AC=1726;AN=2184 GT:DS:GL:BD 0.79029304 1
1 179606810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.3771;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179606858 . A AG 43649 PASS INDEL;BAVGPOST=0.985;BRSQ=0.969;LDAF=0.3771;AVGPOST=0.9840;RSQ=0.9748;ERATE=0.0026;THETA=0.0004;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 179606949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179606971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179606986 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8720;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179607005 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0038;AVGPOST=0.9981;RSQ=0.7958;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179607007 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9687;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179607025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7475;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179607098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0171;AVGPOST=0.9996;RSQ=0.9928;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179607159 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179607160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7815;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179607224 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9892;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179607281 MERGED_DEL_2_6443 ACCATGGGAAGATGTTTTCTCTTATTCTGGGGAAGCACTGATGGTTTTAAGAAAGCCATTGGAGTGAAGGGATGAAGATCTATTAGTGGACTAGTCTTGATGAGAGTGAGACTAGAAAGGAAGAGATAAATTGGGAAAATGAAAATTGCCAGGTGACAAGAAGGGTGTTGAGAAGAATAAGAAAGAGAAG ATCATGGGTAAA . . SV;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3791;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0005;THETA=0.0003;CIEND=-138,232;CIPOS=-193,278;END=179608059;HOMLEN=0;HOMSEQ;SOURCE=AssembledBreakpoints_179607288 GT:DS:GL:BD 0.37820512 0
1 179607312 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.4893;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179607329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7587;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179607584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.715;LDAF=0.0038;AVGPOST=0.9976;RSQ=0.7475;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179607591 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.846;LDAF=0.0831;AVGPOST=0.9878;RSQ=0.9386;ERATE=0.0013;THETA=0.0006;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 179607699 . T TA 22 PASS INDEL;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3681;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179608165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0289;AVGPOST=0.9996;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 179608388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0195;AVGPOST=0.9993;RSQ=0.9848;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179608461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.976;LDAF=0.1540;AVGPOST=0.9937;RSQ=0.9810;ERATE=0.0006;THETA=0.0005;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 179608560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0362;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 179608592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179608757 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179608848 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179608864 . ATTTTC A 393 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6672;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179609005 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179609025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179609049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0035;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 179609212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179609320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179609450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179609549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179609576 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179609589 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2175;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0004;THETA=0.0002;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 179609632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179609746 . CA C 264 PASS INDEL;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179609836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179609844 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179610058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0048;AVGPOST=0.9981;RSQ=0.8416;ERATE=0.0004;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179610087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0413;AVGPOST=0.9988;RSQ=0.9867;ERATE=0.0004;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 179610208 . TATATA T 54 PASS INDEL;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8769;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 179610209 . ATATAAT A 497 PASS INDEL;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0044;AVGPOST=0.9982;RSQ=0.8231;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179610259 . CT C 6089 PASS INDEL;BAVGPOST=0.973;BRSQ=0.946;LDAF=0.3662;AVGPOST=0.9890;RSQ=0.9804;ERATE=0.0010;THETA=0.0003;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 179610260 . TC T 35263 PASS INDEL;BAVGPOST=0.976;BRSQ=0.951;LDAF=0.3696;AVGPOST=0.9954;RSQ=0.9911;ERATE=0.0005;THETA=0.0004;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 179610402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0231;AVGPOST=0.9973;RSQ=0.9523;ERATE=0.0004;THETA=0.0008;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 179610526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5277;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179610537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.630;LDAF=0.0053;AVGPOST=0.9958;RSQ=0.6664;ERATE=0.0006;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179610544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.3689;AVGPOST=0.9924;RSQ=0.9865;ERATE=0.0012;THETA=0.0004;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 179610621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8314;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179610662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0458;AVGPOST=0.9975;RSQ=0.9782;ERATE=0.0005;THETA=0.0002;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 179610680 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6375;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179610737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179610782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179610831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9587;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179610872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179610949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7005;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179610995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179611021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4455;AVGPOST=0.9960;RSQ=0.9936;ERATE=0.0009;THETA=0.0004;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 179611155 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0456;AVGPOST=0.9993;RSQ=0.9939;ERATE=0.0003;THETA=0.0008;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 179611169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7583;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179611196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8681;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179611427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9326;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179611621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.953;LDAF=0.0915;AVGPOST=0.9920;RSQ=0.9673;ERATE=0.0003;THETA=0.0007;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 179611726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0195;AVGPOST=0.9993;RSQ=0.9873;ERATE=0.0003;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 179611734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179611835 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179611864 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.892;BRSQ=0.773;LDAF=0.7210;AVGPOST=0.9172;RSQ=0.8711;ERATE=0.0010;THETA=0.0004;AC=1604;AN=2184 GT:DS:GL:BD 0.73443222 1
1 179611867 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5713;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179611916 . TTC T 183 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5515;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179611964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.7111;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179612014 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.391;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6312;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179612081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3725;AVGPOST=0.9949;RSQ=0.9914;ERATE=0.0017;THETA=0.0010;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 179612109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179612112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179612146 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.912;LDAF=0.0264;AVGPOST=0.9958;RSQ=0.9461;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179612165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9692;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179612258 . G GA 396 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9537;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179612266 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9242;ERATE=0.0004;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 179612293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9896;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179612345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5294;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179612373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0156;AVGPOST=0.9978;RSQ=0.9395;ERATE=0.0005;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 179612403 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179612411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8764;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179612461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4455;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 179612505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3342;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 179612545 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179612666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9352;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179612725 . TG T 2751 PASS INDEL;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0201;AVGPOST=0.9991;RSQ=0.9829;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 179612726 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0302;AVGPOST=0.9952;RSQ=0.9417;ERATE=0.0007;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 179612769 rs77898814 G GA 116643 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9147;AVGPOST=0.9979;RSQ=0.9906;ERATE=0.0008;THETA=0.0006;AC=1999;AN=2184 GT:DS:GL:BD 0.91529304 1
1 179612785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0408;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 179612816 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3531;ERATE=0.0005;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179612835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0410;AVGPOST=0.9994;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 179612839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9073;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179612852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0081;AVGPOST=0.9952;RSQ=0.7545;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 179612947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1211;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 179612956 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179613188 . TATATCTAG T 713 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9198;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179613208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179613223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5461;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179613262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.9149;AVGPOST=0.9991;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=1997;AN=2184 GT:DS:GL:BD 0.91437727 1
1 179613400 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4466;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179613428 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6745;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179613453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8478;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 179613466 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4596;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179613687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9980;RSQ=0.8719;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 179613697 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3667;AVGPOST=0.9968;RSQ=0.9937;ERATE=0.0006;THETA=0.0005;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 179613777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3330;AVGPOST=0.9963;RSQ=0.9933;ERATE=0.0006;THETA=0.0005;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 179613996 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9647;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179614128 rs74307698 TA T 26946 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4049;AVGPOST=0.9941;RSQ=0.9895;ERATE=0.0009;THETA=0.0004;AC=885;AN=2184 GT:DS:GL:BD 0.40521979 0
1 179614147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9983;RSQ=0.8496;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179614243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.271;LDAF=0.0234;AVGPOST=0.9683;RSQ=0.4285;ERATE=0.0030;THETA=0.0018;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 179614519 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9992;RSQ=0.9658;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179614531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7729;AVGPOST=0.9978;RSQ=0.9947;ERATE=0.0006;THETA=0.0008;AC=1689;AN=2184 GT:DS:GL:BD 0.77335167 1
1 179614573 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5970;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179614579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179614612 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.946;LDAF=0.0308;AVGPOST=0.9952;RSQ=0.9471;ERATE=0.0003;THETA=0.0002;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 179614653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179614764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0409;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 179614873 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.638;LDAF=0.0048;AVGPOST=0.9963;RSQ=0.6912;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179615034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8821;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179615045 . T TG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4872;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179615111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0324;AVGPOST=0.9963;RSQ=0.9493;ERATE=0.0006;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 179615174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9466;ERATE=0.0005;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179615229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0099;AVGPOST=0.9994;RSQ=0.9734;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179615338 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9994;RSQ=0.9788;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179615364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0173;AVGPOST=0.9991;RSQ=0.9806;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 179615524 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0347;AVGPOST=0.9954;RSQ=0.9430;ERATE=0.0007;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 179615695 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.213;LDAF=0.0293;AVGPOST=0.9637;RSQ=0.5035;ERATE=0.0017;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 179615715 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0285;AVGPOST=0.9982;RSQ=0.9758;ERATE=0.0005;THETA=0.0013;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179615732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.873;BRSQ=0.459;LDAF=0.1392;AVGPOST=0.8691;RSQ=0.6090;ERATE=0.0082;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 179615764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.891;BRSQ=0.786;LDAF=0.2948;AVGPOST=0.8972;RSQ=0.8344;ERATE=0.0089;THETA=0.0003;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 179615821 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9451;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179617517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.816;BRSQ=0.647;LDAF=0.3083;AVGPOST=0.8290;RSQ=0.7188;ERATE=0.0128;THETA=0.0003;AC=697;AN=2184 GT:DS:GL:BD 0.31913918 0
1 179617735 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.718;LDAF=0.0066;AVGPOST=0.9953;RSQ=0.7329;ERATE=0.0006;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 179617825 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0028;AVGPOST=0.9961;RSQ=0.4282;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179617923 rs67696876 TA T 31655 PASS INDEL;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4534;AVGPOST=0.9848;RSQ=0.9780;ERATE=0.0041;THETA=0.0004;AC=989;AN=2184 GT:DS:GL:BD 0.45283884 0
1 179617931 . AT A 126 PASS INDEL;BAVGPOST=0.986;BRSQ=0.335;LDAF=0.0167;AVGPOST=0.9755;RSQ=0.4383;ERATE=0.0031;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 179617933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9614;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179617988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0032;AVGPOST=0.9968;RSQ=0.5721;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179617998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3734;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 179618014 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4493;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179618034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4968;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179618102 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6943;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179618113 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7731;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=1689;AN=2184 GT:DS:GL:BD 0.77335167 1
1 179618159 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9281;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179618182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179618187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9612;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 179618292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0099;AVGPOST=0.9982;RSQ=0.9197;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179618317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3736;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 179618465 . TATCTC T 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6874;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179618547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.947;LDAF=0.0323;AVGPOST=0.9954;RSQ=0.9522;ERATE=0.0005;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 179618558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179618599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4444;AVGPOST=0.9969;RSQ=0.9946;ERATE=0.0011;THETA=0.0003;AC=971;AN=2184 GT:DS:GL:BD 0.44459707 0
1 179618706 . ACTT A 5820 PASS INDEL;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0370;AVGPOST=0.9965;RSQ=0.9577;ERATE=0.0006;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 179618712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179618766 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0077;AVGPOST=0.9970;RSQ=0.8407;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 179618878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0035;AVGPOST=0.9957;RSQ=0.5684;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179618922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179618925 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6879;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179618943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9480;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179619085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8295;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179619088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179619231 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5256;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179619273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6818;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179619290 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0310;AVGPOST=0.9991;RSQ=0.9871;ERATE=0.0004;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 179619299 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6420;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179619365 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9983;RSQ=0.8344;ERATE=0.0006;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179619380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9995;RSQ=0.9812;ERATE=0.0004;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 179619400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179619558 . AGTT A 685 PASS INDEL;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0096;AVGPOST=0.9967;RSQ=0.8898;ERATE=0.0003;THETA=0.0014;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179619584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=0.9996;RSQ=0.9939;ERATE=0.0003;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 179619653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179619654 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179619665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9122;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=1992;AN=2184 GT:DS:GL:BD 0.91208792 1
1 179619676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3667;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0005;THETA=0.0005;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 179619749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6939;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179619833 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8329;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 179620121 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179620253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3665;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 179620321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179620461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6258;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179620556 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0413;AVGPOST=0.9986;RSQ=0.9857;ERATE=0.0005;THETA=0.0006;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 179620558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9991;RSQ=0.9095;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179620589 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4951;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179620637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1214;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 179620653 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9307;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 179620690 . T TG 13188 PASS INDEL;BAVGPOST=0.978;BRSQ=0.959;LDAF=0.4436;AVGPOST=0.9922;RSQ=0.9866;ERATE=0.0011;THETA=0.0005;AC=973;AN=2184 GT:DS:GL:BD 0.44551283 0
1 179620691 rs11399818 G GT 52677 PASS INDEL;BAVGPOST=0.982;BRSQ=0.967;LDAF=0.4452;AVGPOST=0.9958;RSQ=0.9927;ERATE=0.0006;THETA=0.0002;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 179620776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.676;LDAF=0.9970;AVGPOST=0.9975;RSQ=0.6441;ERATE=0.0014;THETA=0.0010;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 179620819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0039;AVGPOST=0.9958;RSQ=0.5708;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 179620876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.817;LDAF=0.0052;AVGPOST=0.9978;RSQ=0.8290;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179620967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0104;AVGPOST=0.9975;RSQ=0.9218;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 179621164 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0338;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 179621208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179621224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0407;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 179621253 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0017;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179621430 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9630;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 179621518 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 179621649 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179621770 . C CA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179621878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9614;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179621943 . TG T 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179621992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3827;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179622081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3695;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0008;THETA=0.0004;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 179622117 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7775;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 179622361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8869;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179622370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0413;AVGPOST=0.9987;RSQ=0.9856;ERATE=0.0003;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 179622408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0072;AVGPOST=0.9992;RSQ=0.9569;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 179622551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6815;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179622582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0288;AVGPOST=0.9990;RSQ=0.9875;ERATE=0.0003;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 179622872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179622938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 179622959 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179622977 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3698;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 179622992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179622996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3333;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=727;AN=2184 GT:DS:GL:BD 0.33287546 0
1 179623024 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 179623166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9235;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 179623429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0092;AVGPOST=0.9988;RSQ=0.9465;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 179623706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9580;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0