1092
10000
1 186539742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3753;AVGPOST=0.9980;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 186539762 . T TC 188 PASS INDEL;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7605;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186539915 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5374;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186540068 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186540142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8319;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186540202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4675;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186540220 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.960;LDAF=0.2956;AVGPOST=0.9839;RSQ=0.9728;ERATE=0.0003;THETA=0.0005;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 186540221 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.960;LDAF=0.2958;AVGPOST=0.9851;RSQ=0.9749;ERATE=0.0003;THETA=0.0004;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 186540408 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5852;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186540575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0163;AVGPOST=0.9977;RSQ=0.9393;ERATE=0.0005;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186540677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0385;AVGPOST=0.9982;RSQ=0.9817;ERATE=0.0004;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 186540682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186540720 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.9132;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186540759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.869;LDAF=0.0127;AVGPOST=0.9979;RSQ=0.9287;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186540762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3780;AVGPOST=0.9970;RSQ=0.9944;ERATE=0.0007;THETA=0.0003;AC=824;AN=2184 GT:DS:GL:BD 0.37728938 0
1 186540842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.964;LDAF=0.0928;AVGPOST=0.9950;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 186540843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.955;LDAF=0.0634;AVGPOST=0.9953;RSQ=0.9696;ERATE=0.0002;THETA=0.0004;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 186540978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9368;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186540996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186541101 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0175;AVGPOST=0.9995;RSQ=0.9885;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 186541339 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186541360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0375;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0002;THETA=0.0014;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 186541446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0335;AVGPOST=0.9996;RSQ=0.9950;ERATE=0.0002;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 186541493 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9385;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186541518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8088;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186541549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0363;AVGPOST=0.9996;RSQ=0.9946;ERATE=0.0003;THETA=0.0009;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 186541805 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186541869 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186542057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9290;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186542452 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186542507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186542696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0073;AVGPOST=0.9995;RSQ=0.9699;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186542716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1192;AVGPOST=0.9987;RSQ=0.9948;ERATE=0.0004;THETA=0.0046;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 186542756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5719;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186542764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7936;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186542795 rs67355818 AC A 7345 PASS INDEL;BAVGPOST=0.987;BRSQ=0.946;LDAF=0.1418;AVGPOST=0.9864;RSQ=0.9594;ERATE=0.0005;THETA=0.0003;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 186542797 rs34289198 AC A 7136 PASS INDEL;BAVGPOST=0.987;BRSQ=0.946;LDAF=0.1414;AVGPOST=0.9865;RSQ=0.9607;ERATE=0.0003;THETA=0.0006;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 186542872 . T TC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6211;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186543134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186543154 . A AG 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4498;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186543159 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186543205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7816;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186543238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0081;AVGPOST=0.9968;RSQ=0.8431;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186543304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8491;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186543393 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9996;RSQ=0.9908;ERATE=0.0002;THETA=0.0014;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186543423 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0085;AVGPOST=0.9992;RSQ=0.9617;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186543440 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186543614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1949;AVGPOST=0.9974;RSQ=0.9933;ERATE=0.0006;THETA=0.0003;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 186543790 rs112296714 T TTCAC 32857 PASS INDEL;BAVGPOST=0.986;BRSQ=0.960;LDAF=0.1951;AVGPOST=0.9962;RSQ=0.9890;ERATE=0.0006;THETA=0.0004;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 186543848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.880;LDAF=0.4453;AVGPOST=0.9149;RSQ=0.8682;ERATE=0.0194;THETA=0.0003;AC=986;AN=2184 GT:DS:GL:BD 0.45146519 0
1 186543894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0047;AVGPOST=0.9986;RSQ=0.8663;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186543981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.1777;AVGPOST=0.9984;RSQ=0.9962;ERATE=0.0003;THETA=0.0008;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 186544020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7740;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186544155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.810;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9322;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186544158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9992;RSQ=0.9803;ERATE=0.0002;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186544201 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0056;AVGPOST=0.9974;RSQ=0.8310;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186544264 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186544347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186544451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5834;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186545085 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.8985;ERATE=0.0003;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186545143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186545206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186545289 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186545318 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2053;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0005;THETA=0.0002;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 186545343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186545717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6264;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=1370;AN=2184 GT:DS:GL:BD 0.62728935 1
1 186545755 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0170;AVGPOST=0.9996;RSQ=0.9884;ERATE=0.0002;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 186545762 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9987;RSQ=0.9263;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186545815 . GC G 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.6019;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186545842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0128;AVGPOST=0.9987;RSQ=0.9609;ERATE=0.0005;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186545846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9685;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186545987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9065;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186546033 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8533;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186546163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5309;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186546176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1773;AVGPOST=0.9984;RSQ=0.9963;ERATE=0.0002;THETA=0.0003;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 186546187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0196;AVGPOST=0.9968;RSQ=0.9346;ERATE=0.0002;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 186546290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7257;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186546326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186546383 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186546446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186546541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5403;ERATE=0.0002;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186546546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186546577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6616;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186546728 . CAA C 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7233;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186546747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7085;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186546825 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9945;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186546900 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0038;AVGPOST=0.9974;RSQ=0.7270;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186547067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8822;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186547110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6815;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186547183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186547333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1946;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 186547350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0002;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186547467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6853;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186547558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186547559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8006;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186547579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=0.9998;RSQ=0.9935;ERATE=0.0002;THETA=0.0024;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 186547646 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186547803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186547862 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9989;RSQ=0.3667;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186547952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0962;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 186547988 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1949;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 186548140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9127;AVGPOST=0.9983;RSQ=0.9917;ERATE=0.0002;THETA=0.0003;AC=1993;AN=2184 GT:DS:GL:BD 0.91254580 1
1 186548241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8224;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186548242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186548334 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186548342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6340;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186548433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1947;AVGPOST=0.9981;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 186548617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3893;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0007;AC=850;AN=2184 GT:DS:GL:BD 0.38919413 0
1 186548710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7925;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186548857 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3743;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 186548860 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4373;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186548881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7629;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186549038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0031;AVGPOST=0.9952;RSQ=0.5733;ERATE=0.0003;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186549235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9736;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186549251 . A AC 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5236;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186549307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0080;AVGPOST=0.9986;RSQ=0.9276;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186549444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7202;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186549638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9826;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186549648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9598;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186549681 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186549687 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186549775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9517;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186549893 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0088;AVGPOST=0.9992;RSQ=0.9646;ERATE=0.0002;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186549930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6514;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186550026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2176;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 186550036 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3897;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0005;THETA=0.0005;AC=852;AN=2184 GT:DS:GL:BD 0.39010990 0
1 186550288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9029;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186550345 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6108;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186550352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7689;ERATE=0.0003;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186550362 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5917;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186550429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7563;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186550497 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5179;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186550535 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2066;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0005;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 186550590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6457;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186550629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9272;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186550635 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0031;AVGPOST=0.9968;RSQ=0.6276;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186550636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.7509;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186550652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9311;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186550679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7918;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186550738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1898;AVGPOST=0.9973;RSQ=0.9932;ERATE=0.0006;THETA=0.0004;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 186550740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8265;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186550760 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186550817 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5198;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186550864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7446;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186551100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.844;LDAF=0.0104;AVGPOST=0.9961;RSQ=0.8440;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186551187 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6524;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186551279 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5995;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186551367 rs111255799 AGAAC A 29771 PASS INDEL;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.2189;AVGPOST=0.9973;RSQ=0.9934;ERATE=0.0007;THETA=0.0017;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 186551411 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9640;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186551548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0370;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0002;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 186551609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6762;ERATE=0.0002;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186551815 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7803;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186551883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186551884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9560;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186551940 MERGED_DEL_2_6558 TCCCAGCCATGTGGAACTGTGAGTCAATTAAATATCTTTCCATTATAAATTACCCAGTTTCAGGTATGTCTTTATTAGCAGTGTGAGAACAGACTAACACAGTAAATTGGAACCAGTAGAATGGGGTGCTGCTGTAAAGATACCCAAAAATGTGAAAGTGACTTTGGAACTGGGTAACAGGAAGAAGTTG T . . SV;BAVGPOST=0.997;BRSQ=0.527;LDAF=0.0051;AVGPOST=0.9947;RSQ=0.5998;ERATE=0.0009;THETA=0.0006;CIEND=-72,81;CIPOS=-93,64;END=186553861;HOMLEN=8;HOMSEQ=CCCAGCCA;SOURCE=BreakDancer_186551907_186 GT:DS:GL:BD 0.00457875 0
1 186551981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9691;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186552007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2071;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 186552022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2069;AVGPOST=0.9988;RSQ=0.9969;ERATE=0.0004;THETA=0.0009;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 186552272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.955;LDAF=0.0257;AVGPOST=0.9974;RSQ=0.9664;ERATE=0.0003;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 186552350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9113;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186552546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186552711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9986;RSQ=0.8920;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186553054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0086;AVGPOST=0.9973;RSQ=0.8600;ERATE=0.0009;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186553163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.6134;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186553197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0153;AVGPOST=0.9984;RSQ=0.9547;ERATE=0.0003;THETA=0.0001;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186553288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4959;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186553310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8232;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186553351 . A AT 486 PASS INDEL;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9641;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186553386 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186553412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6791;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186553418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.528;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6203;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186553565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8968;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186553635 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8378;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186553660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.854;LDAF=0.0092;AVGPOST=0.9973;RSQ=0.8877;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186553662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9591;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186553663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6542;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186553680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.866;LDAF=0.0099;AVGPOST=0.9985;RSQ=0.9451;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186553852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5825;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186553974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186554007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5865;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186554144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.2246;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186554154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186554170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2069;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186554226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.957;LDAF=0.0379;AVGPOST=0.9971;RSQ=0.9685;ERATE=0.0005;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 186554266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.972;LDAF=0.1216;AVGPOST=0.9970;RSQ=0.9876;ERATE=0.0003;THETA=0.0003;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 186554277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.973;LDAF=0.1218;AVGPOST=0.9965;RSQ=0.9858;ERATE=0.0004;THETA=0.0003;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 186554286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0150;AVGPOST=0.9989;RSQ=0.9687;ERATE=0.0002;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186554354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0033;AVGPOST=0.9982;RSQ=0.7840;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186554389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.873;LDAF=0.0112;AVGPOST=0.9983;RSQ=0.9299;ERATE=0.0003;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186554457 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2069;AVGPOST=0.9978;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186554556 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186554619 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9462;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186554691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6260;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186554699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.4800;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186554719 . TAGC T 639 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9323;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186554725 . TTTTAA T 655 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9691;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186554759 . T TC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186554888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8241;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186555036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6504;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186555088 . A AT 39 PASS INDEL;BAVGPOST=0.998;BRSQ=0.561;LDAF=0.0051;AVGPOST=0.9956;RSQ=0.6450;ERATE=0.0011;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186555123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5664;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186555169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0144;AVGPOST=0.9937;RSQ=0.8307;ERATE=0.0009;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186555170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.1183;AVGPOST=0.9971;RSQ=0.9879;ERATE=0.0005;THETA=0.0002;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 186555318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.976;LDAF=0.2082;AVGPOST=0.9970;RSQ=0.9935;ERATE=0.0006;THETA=0.0004;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 186555372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2072;AVGPOST=0.9984;RSQ=0.9957;ERATE=0.0006;THETA=0.0004;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 186555415 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186555465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9365;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186555706 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186555803 . TACTA T 685 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9986;RSQ=0.9048;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186555950 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6509;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186555953 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0107;AVGPOST=0.9984;RSQ=0.9326;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186555954 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1219;AVGPOST=0.9960;RSQ=0.9841;ERATE=0.0005;THETA=0.0004;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 186555991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8342;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186556136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.4935;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186556177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.805;LDAF=0.0049;AVGPOST=0.9979;RSQ=0.8248;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186556198 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8130;ERATE=0.0002;THETA=0.0027;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186556238 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0109;AVGPOST=0.9990;RSQ=0.9559;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186556270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3884;AVGPOST=0.9962;RSQ=0.9933;ERATE=0.0008;THETA=0.0004;AC=848;AN=2184 GT:DS:GL:BD 0.38827839 0
1 186556280 . CAT C 147 PASS INDEL;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7196;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186556326 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2073;AVGPOST=0.9978;RSQ=0.9950;ERATE=0.0004;THETA=0.0003;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186556355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0177;AVGPOST=0.9991;RSQ=0.9778;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 186556363 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5444;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186556478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.945;LDAF=0.2026;AVGPOST=0.9943;RSQ=0.9865;ERATE=0.0005;THETA=0.0005;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 186556608 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2068;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0004;THETA=0.0008;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186556714 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186556936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2054;AVGPOST=0.9979;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 186557060 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186557176 . G GA 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0030;AVGPOST=0.9954;RSQ=0.3586;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186557179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.6385;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186557358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0154;AVGPOST=0.9980;RSQ=0.9463;ERATE=0.0002;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186557363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186557453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2183;AVGPOST=0.9926;RSQ=0.9820;ERATE=0.0004;THETA=0.0004;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 186557493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186557631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186557665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9731;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186557808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.5373;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186557890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2412;AVGPOST=0.9957;RSQ=0.9895;ERATE=0.0007;THETA=0.0003;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 186557931 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5118;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186558024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7623;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186558045 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186558069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7104;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186558146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186558164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5385;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186558377 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2067;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0004;THETA=0.0006;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186558445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186558540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2071;AVGPOST=0.9985;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186558576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5724;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186558724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186558746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186558776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9997;RSQ=0.9924;ERATE=0.0002;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 186558788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7490;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186558798 . T TA 174 PASS INDEL;BAVGPOST=0.985;BRSQ=0.491;LDAF=0.0352;AVGPOST=0.9548;RSQ=0.4754;ERATE=0.0099;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 186558800 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7873;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186558892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0127;AVGPOST=0.9983;RSQ=0.9460;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186558970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7013;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186559136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186559228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0371;AVGPOST=0.9993;RSQ=0.9914;ERATE=0.0004;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 186559280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0002;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186559331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2060;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 186559332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186559361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186559451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5461;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186559567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186559570 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0149;AVGPOST=0.9993;RSQ=0.9807;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186559831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9794;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186559923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186559924 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9121;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186559969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.557;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.4749;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186560104 . AAAT A 1399 PASS INDEL;BAVGPOST=0.960;BRSQ=0.761;LDAF=0.0995;AVGPOST=0.9695;RSQ=0.8754;ERATE=0.0008;THETA=0.0005;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 186560106 . AT A 3012 PASS INDEL;BAVGPOST=0.982;BRSQ=0.919;LDAF=0.1155;AVGPOST=0.9901;RSQ=0.9650;ERATE=0.0005;THETA=0.0003;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 186560231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6908;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186560480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9313;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186560600 . T TG 175 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186560661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1894;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0003;THETA=0.0007;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 186560836 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186560853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186560881 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9236;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186560993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8467;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186561027 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186561065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186561069 . G GA 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186561095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.5311;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186561148 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186561205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186561254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6899;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186561281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7512;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186561460 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2064;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186561575 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6447;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186561679 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0002;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 186561765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.928;LDAF=0.0115;AVGPOST=0.9966;RSQ=0.8985;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186561796 . AG A 502 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9012;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186561827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9077;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186561897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6336;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186561975 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9551;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186562033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1903;AVGPOST=0.9982;RSQ=0.9963;ERATE=0.0004;THETA=0.0006;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 186562049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9189;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186562126 . G GA 125 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4616;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186562192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.5276;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186562212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186562262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.758;LDAF=0.0042;AVGPOST=0.9986;RSQ=0.8576;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186562286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186562317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8791;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186562386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0101;AVGPOST=0.9996;RSQ=0.9825;ERATE=0.0002;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186562478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186562514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8118;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186562546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8504;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186562680 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1902;AVGPOST=0.9977;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 186562750 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9975;RSQ=0.9355;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186562908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0372;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 186562930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1189;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 186562938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1898;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 186563033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186563106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.905;LDAF=0.0323;AVGPOST=0.9943;RSQ=0.9356;ERATE=0.0003;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 186563221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5357;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186563240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7986;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186563270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6384;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186563271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9159;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186563560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5459;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186563763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1191;AVGPOST=0.9988;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 186563786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7704;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186563803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0115;AVGPOST=0.9992;RSQ=0.9755;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186563846 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0059;AVGPOST=0.9972;RSQ=0.8120;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186563920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186563934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0063;AVGPOST=0.9971;RSQ=0.8355;ERATE=0.0005;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186563950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5120;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186564180 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8734;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186564190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7639;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186564197 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1901;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 186564244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186564295 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.7312;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186564397 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6641;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186564465 . GT G 1674 PASS INDEL;BAVGPOST=0.994;BRSQ=0.825;LDAF=0.0209;AVGPOST=0.9931;RSQ=0.8581;ERATE=0.0004;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 186564482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6802;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186564501 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2071;AVGPOST=0.9986;RSQ=0.9964;ERATE=0.0004;THETA=0.0005;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186564556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.735;LDAF=0.0069;AVGPOST=0.9932;RSQ=0.5946;ERATE=0.0005;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186564558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0166;AVGPOST=0.9961;RSQ=0.9067;ERATE=0.0004;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 186564641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8923;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186564864 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5102;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186564871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2066;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186564935 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6030;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186564938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8459;ERATE=0.0003;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186565093 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0053;AVGPOST=0.9955;RSQ=0.6702;ERATE=0.0009;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186565157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6511;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186565198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3727;AVGPOST=0.9975;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 186565249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0045;AVGPOST=0.9972;RSQ=0.7534;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186565450 . T TTA 74 PASS INDEL;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7986;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186565610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9410;ERATE=0.0002;THETA=0.0034;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186565640 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186565716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186565776 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186565849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1192;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 186566005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.734;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7642;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186566019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.7413;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186566289 rs11383238 T TA 73116 PASS INDEL;BAVGPOST=0.980;BRSQ=0.930;LDAF=0.8510;AVGPOST=0.9709;RSQ=0.9181;ERATE=0.0010;THETA=0.0006;AC=1853;AN=2184 GT:DS:GL:BD 0.84844321 1
1 186566294 rs67675710 G GA 12691 PASS INDEL;BAVGPOST=0.895;BRSQ=0.750;LDAF=0.7170;AVGPOST=0.8300;RSQ=0.7095;ERATE=0.0466;THETA=0.0003;AC=1643;AN=2184 GT:DS:GL:BD 0.75228935 1
1 186566350 . T TTTTC 7349 PASS INDEL;BAVGPOST=0.996;BRSQ=0.952;LDAF=0.0377;AVGPOST=0.9984;RSQ=0.9801;ERATE=0.0004;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 186566386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0150;AVGPOST=0.9992;RSQ=0.9804;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186566397 . TTTC T 142 PASS INDEL;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0032;AVGPOST=0.9963;RSQ=0.5257;ERATE=0.0007;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186566429 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.918;LDAF=0.2379;AVGPOST=0.9407;RSQ=0.8797;ERATE=0.0195;THETA=0.0006;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 186566434 . CTT C 133 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7414;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186566440 . CTCTCTT C 2406 PASS INDEL;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0159;AVGPOST=0.9975;RSQ=0.9423;ERATE=0.0005;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186566467 . CCTTT C 910 PASS INDEL;BAVGPOST=0.995;BRSQ=0.820;LDAF=0.0224;AVGPOST=0.9796;RSQ=0.6656;ERATE=0.0018;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186566484 rs71104872 C CTT 13534 PASS INDEL;BAVGPOST=0.884;BRSQ=0.725;LDAF=0.2934;AVGPOST=0.8566;RSQ=0.7217;ERATE=0.0285;THETA=0.0004;AC=605;AN=2184 GT:DS:GL:BD 0.27701464 0
1 186566493 rs55943230 TC T 419 PASS INDEL;BAVGPOST=0.950;BRSQ=0.456;LDAF=0.0721;AVGPOST=0.9265;RSQ=0.5627;ERATE=0.0072;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 186566496 rs57380115 CTT C 1407 PASS INDEL;BAVGPOST=0.870;BRSQ=0.601;LDAF=0.2303;AVGPOST=0.7980;RSQ=0.5437;ERATE=0.0377;THETA=0.0008;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 186566552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.640;LDAF=0.0249;AVGPOST=0.9785;RSQ=0.6695;ERATE=0.0014;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 186566554 . TTC T 4884 PASS INDEL;BAVGPOST=0.911;BRSQ=0.626;LDAF=0.1768;AVGPOST=0.8546;RSQ=0.5842;ERATE=0.0280;THETA=0.0003;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 186566604 . T TC 215 PASS INDEL;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0059;AVGPOST=0.9944;RSQ=0.6045;ERATE=0.0012;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186566631 . CTTCCTTCT C 1756 PASS INDEL;BAVGPOST=0.992;BRSQ=0.919;LDAF=0.0416;AVGPOST=0.9896;RSQ=0.8936;ERATE=0.0019;THETA=0.0018;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 186566639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.696;LDAF=0.1100;AVGPOST=0.9021;RSQ=0.5900;ERATE=0.0297;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 186566665 . G GC 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3428;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186566677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9988;RSQ=0.9446;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186566857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.580;LDAF=0.0210;AVGPOST=0.9777;RSQ=0.6035;ERATE=0.0035;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186566932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9416;ERATE=0.0002;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186566935 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1902;AVGPOST=0.9983;RSQ=0.9961;ERATE=0.0005;THETA=0.0005;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 186567030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9344;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186567114 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8468;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186567252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1899;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0006;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 186567292 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.6215;ERATE=0.0004;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186567448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.841;LDAF=0.0094;AVGPOST=0.9972;RSQ=0.8982;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186567495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0369;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0002;THETA=0.0002;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 186567545 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6819;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186567589 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2066;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186567646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2070;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0010;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 186567680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.640;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.7105;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186567762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186567812 . CTCA C 98 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6947;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186567844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186567847 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186567851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186567965 . AC A 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0034;AVGPOST=0.9957;RSQ=0.5238;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186567967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.819;LDAF=0.0112;AVGPOST=0.9967;RSQ=0.8797;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186568028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186568040 rs80231472 AGT A 121210 PASS INDEL;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.9968;AVGPOST=0.9975;RSQ=0.7236;ERATE=0.0003;THETA=0.0004;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 186568042 rs80231472 TG T 24400 PASS INDEL;BAVGPOST=0.995;BRSQ=0.557;LDAF=0.9879;AVGPOST=0.9884;RSQ=0.6479;ERATE=0.0015;THETA=0.0003;AC=2163;AN=2184 GT:DS:GL:BD 0.99038464 1
1 186568109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.821;LDAF=0.0051;AVGPOST=0.9965;RSQ=0.7232;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186568240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7656;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186568289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6770;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186568566 . CA C 335 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7842;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186568594 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2067;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0004;THETA=0.0005;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186568607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4768;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186568648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9369;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186568796 . TTTG T 306 PASS INDEL;BAVGPOST=0.920;BRSQ=0.493;LDAF=0.0612;AVGPOST=0.9465;RSQ=0.6996;ERATE=0.0006;THETA=0.0010;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 186568997 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186569015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5408;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186569023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8296;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186569062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0478;AVGPOST=0.9984;RSQ=0.9867;ERATE=0.0003;THETA=0.0007;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 186569408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186569429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3915;AVGPOST=0.9963;RSQ=0.9939;ERATE=0.0006;THETA=0.0004;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 186569471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0392;AVGPOST=0.9980;RSQ=0.9805;ERATE=0.0003;THETA=0.0056;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 186569587 . TG T 55 PASS INDEL;BAVGPOST=0.994;BRSQ=0.483;LDAF=0.0050;AVGPOST=0.9941;RSQ=0.5157;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186569598 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8555;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186569721 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0115;AVGPOST=0.9993;RSQ=0.9772;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186569863 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0125;AVGPOST=0.9979;RSQ=0.9405;ERATE=0.0004;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186569890 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.875;LDAF=0.0102;AVGPOST=0.9981;RSQ=0.9310;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186570114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8952;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186570239 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186570301 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0071;AVGPOST=0.9961;RSQ=0.8062;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186570302 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.904;LDAF=0.1825;AVGPOST=0.9676;RSQ=0.9230;ERATE=0.0052;THETA=0.0005;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 186570302 rs112178034 T TA 17213 PASS INDEL;BAVGPOST=0.982;BRSQ=0.316;LDAF=0.9699;AVGPOST=0.9628;RSQ=0.5037;ERATE=0.0033;THETA=0.0003;AC=2137;AN=2184 GT:DS:GL:BD 0.97847986 1
1 186570324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9303;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186570429 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2067;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186570491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9987;RSQ=0.9253;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186570695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186570727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186570733 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8964;AVGPOST=0.9970;RSQ=0.9867;ERATE=0.0003;THETA=0.0002;AC=1957;AN=2184 GT:DS:GL:BD 0.89606225 1
1 186570752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186570785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7045;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186570843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0070;AVGPOST=0.9987;RSQ=0.9301;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186570857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186570885 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186570909 . AAAGT A 141 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186570972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5894;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186570991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.971;LDAF=0.1872;AVGPOST=0.9931;RSQ=0.9846;ERATE=0.0004;THETA=0.0003;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 186571233 rs34182249 C CA 1508 PASS INDEL;BAVGPOST=0.549;BRSQ=0.180;LDAF=0.6013;AVGPOST=0.7331;RSQ=0.5382;ERATE=0.0187;THETA=0.0004;AC=1319;AN=2184 GT:DS:GL:BD 0.60393775 1
1 186571351 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2073;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0003;THETA=0.0009;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 186571397 . TTC T 1485 PASS INDEL;BAVGPOST=0.878;BRSQ=0.734;LDAF=0.2853;AVGPOST=0.8866;RSQ=0.7967;ERATE=0.0070;THETA=0.0005;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 186571401 rs111658780 CTCT C 26502 PASS INDEL;BAVGPOST=0.976;BRSQ=0.957;LDAF=0.3822;AVGPOST=0.9893;RSQ=0.9832;ERATE=0.0005;THETA=0.0002;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 186571405 . TC T 48 PASS INDEL;BAVGPOST=0.786;BRSQ=0.128;LDAF=0.1718;AVGPOST=0.7747;RSQ=0.3722;ERATE=0.0135;THETA=0.0003;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 186571460 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8447;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186571498 . T TG 641 PASS INDEL;BAVGPOST=0.989;BRSQ=0.685;LDAF=0.0291;AVGPOST=0.9704;RSQ=0.5863;ERATE=0.0072;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 186571530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8605;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186571655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4957;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186571689 . TG T 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5168;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186571734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0184;AVGPOST=0.9971;RSQ=0.9419;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 186571741 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7151;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186571751 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.775;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6837;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186571754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9992;RSQ=0.9820;ERATE=0.0002;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186571936 . A AT 99 PASS INDEL;BAVGPOST=0.990;BRSQ=0.408;LDAF=0.0135;AVGPOST=0.9812;RSQ=0.4763;ERATE=0.0020;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186571938 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0048;AVGPOST=0.9964;RSQ=0.6947;ERATE=0.0008;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186572099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1891;AVGPOST=0.9974;RSQ=0.9942;ERATE=0.0004;THETA=0.0008;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 186572106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.9118;AVGPOST=0.9973;RSQ=0.9860;ERATE=0.0002;THETA=0.0004;AC=1993;AN=2184 GT:DS:GL:BD 0.91254580 1
1 186572184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1169;AVGPOST=0.9940;RSQ=0.9772;ERATE=0.0003;THETA=0.0003;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 186572303 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5838;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186572333 . A AT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5545;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186572379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8768;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186572385 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9369;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186572388 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186572482 . CTTGT C 154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3944;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186572506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1194;AVGPOST=0.9985;RSQ=0.9941;ERATE=0.0004;THETA=0.0003;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 186572520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1897;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 186572547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0963;AVGPOST=0.9990;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 186572593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0008;AVGPOST=0.9984;RSQ=0.1958;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186572844 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186572855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1191;AVGPOST=0.9977;RSQ=0.9916;ERATE=0.0003;THETA=0.0003;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 186572856 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8389;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186572944 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.952;LDAF=0.1159;AVGPOST=0.9960;RSQ=0.9845;ERATE=0.0006;THETA=0.0004;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 186573220 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5964;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186573293 . A ATG 107 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5017;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186573312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5875;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186573334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4885;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186573438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8810;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186573465 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2163;AVGPOST=0.9973;RSQ=0.9940;ERATE=0.0007;THETA=0.0008;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 186573566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5046;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186573602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9871;ERATE=0.0002;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186573730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2069;AVGPOST=0.9987;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186573809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6825;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186573846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186573853 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7355;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186573988 . TC T 102 PASS INDEL;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7464;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186574021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2070;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 186574102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0153;AVGPOST=0.9988;RSQ=0.9742;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186574229 . C CT 97 PASS INDEL;BAVGPOST=0.998;BRSQ=0.676;LDAF=0.0037;AVGPOST=0.9971;RSQ=0.7425;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186574296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5502;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186574505 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8764;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186574518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2075;AVGPOST=0.9982;RSQ=0.9958;ERATE=0.0006;THETA=0.0005;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 186574553 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4699;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186574571 . G GT 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4382;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186574603 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7031;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186574677 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9018;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186574691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2059;AVGPOST=0.9978;RSQ=0.9949;ERATE=0.0004;THETA=0.0005;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186574692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0164;AVGPOST=0.9981;RSQ=0.9516;ERATE=0.0004;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 186574788 . CA C 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186574798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186574802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186574826 . AC A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186574894 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8948;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186575084 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6856;ERATE=0.0002;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186575085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186575195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6272;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186575321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186575487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9823;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186575514 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.2101;AVGPOST=0.9969;RSQ=0.9937;ERATE=0.0003;THETA=0.0005;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 186575518 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.2110;AVGPOST=0.9971;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 186575760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186575866 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7840;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186575872 . TTTC T 277 PASS INDEL;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9033;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186575889 . CT C 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5335;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186575899 . CTCCT C 50 PASS INDEL;BAVGPOST=0.990;BRSQ=0.319;LDAF=0.0510;AVGPOST=0.9317;RSQ=0.4756;ERATE=0.0036;THETA=0.0037;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 186576040 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7098;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186576119 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5108;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186576230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9296;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186576330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2078;AVGPOST=0.9981;RSQ=0.9953;ERATE=0.0006;THETA=0.0005;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 186576338 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186576673 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5995;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186576704 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0170;AVGPOST=0.9996;RSQ=0.9896;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 186576769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5338;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186576836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0073;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186576871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2064;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186576930 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2172;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0008;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 186576984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9400;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186576993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9777;ERATE=0.0002;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186577008 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.865;LDAF=0.0226;AVGPOST=0.9976;RSQ=0.9559;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 186577034 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2172;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0006;THETA=0.0003;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 186577062 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9579;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186577141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0118;AVGPOST=0.9963;RSQ=0.8800;ERATE=0.0002;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186577164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186577180 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2080;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 186577207 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186577208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186577461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2139;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0002;THETA=0.0004;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 186577489 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0002;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186577546 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9741;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186577616 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186577667 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186577717 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2140;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0004;THETA=0.0010;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 186577731 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9357;ERATE=0.0002;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186577738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9629;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186577854 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186577925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5128;AVGPOST=0.9962;RSQ=0.9938;ERATE=0.0004;THETA=0.0003;AC=1119;AN=2184 GT:DS:GL:BD 0.51236266 1
1 186578102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186578142 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186578220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0159;AVGPOST=0.9980;RSQ=0.9632;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 186578288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9133;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186578514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8476;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186578592 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.884;LDAF=0.0160;AVGPOST=0.9953;RSQ=0.8982;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186578594 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4797;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186578636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0244;AVGPOST=0.9974;RSQ=0.9612;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 186578723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6955;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186578757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9529;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186578830 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3684;AVGPOST=0.9976;RSQ=0.9960;ERATE=0.0003;THETA=0.0036;AC=804;AN=2184 GT:DS:GL:BD 0.36813188 0
1 186578857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9603;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186579026 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186579092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6565;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186579159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8826;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186579193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186579281 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2157;AVGPOST=0.9971;RSQ=0.9935;ERATE=0.0006;THETA=0.0003;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 186579575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9817;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186579686 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6595;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186579709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0124;AVGPOST=0.9991;RSQ=0.9771;ERATE=0.0002;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186579732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8231;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186579773 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8093;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186579902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186579945 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8741;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186580189 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186580253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3703;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186580301 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186580391 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6602;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186580648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186580678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186580718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186580747 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6580;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186580824 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.5175;AVGPOST=0.9971;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=1129;AN=2184 GT:DS:GL:BD 0.51694137 1
1 186580844 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0183;AVGPOST=0.9988;RSQ=0.9707;ERATE=0.0004;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 186580962 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1185;AVGPOST=0.9975;RSQ=0.9911;ERATE=0.0002;THETA=0.0007;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 186580963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186581005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1122;AVGPOST=0.9974;RSQ=0.9889;ERATE=0.0004;THETA=0.0003;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 186581021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0470;AVGPOST=0.9989;RSQ=0.9895;ERATE=0.0002;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 186581097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8574;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186581206 . TGAA T 564 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9302;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186581361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.962;LDAF=0.0547;AVGPOST=0.9964;RSQ=0.9714;ERATE=0.0003;THETA=0.0006;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 186581370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.429;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4846;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186581371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186581439 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0140;AVGPOST=0.9986;RSQ=0.9605;ERATE=0.0002;THETA=0.0001;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186581605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186581650 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186581762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5520;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186581875 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9100;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186582036 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5851;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186582040 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5968;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186582064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186582066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186582073 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186582110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186582353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.893;LDAF=0.0208;AVGPOST=0.9957;RSQ=0.9142;ERATE=0.0005;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 186582394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7511;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186582405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.916;LDAF=0.0337;AVGPOST=0.9978;RSQ=0.9739;ERATE=0.0004;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 186582482 rs35816554 G GA 13640 PASS INDEL;BAVGPOST=0.953;BRSQ=0.875;LDAF=0.2306;AVGPOST=0.9045;RSQ=0.8006;ERATE=0.0227;THETA=0.0002;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 186582662 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.4761;AVGPOST=0.9842;RSQ=0.9773;ERATE=0.0018;THETA=0.0002;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 186582672 rs58452682 AT A 669 PASS INDEL;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9643;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186582808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186582865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8821;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186582943 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8363;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186583022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7250;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186583041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186583070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5849;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186583155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8555;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186583251 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186583286 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8734;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186583289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5914;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186583308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1117;AVGPOST=0.9986;RSQ=0.9940;ERATE=0.0004;THETA=0.0007;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 186583327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9479;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186583362 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186583470 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7762;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186583481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186583553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5796;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186583665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186583733 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5981;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186583895 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.934;LDAF=0.0366;AVGPOST=0.9962;RSQ=0.9638;ERATE=0.0002;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 186583969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0031;AVGPOST=0.9964;RSQ=0.5132;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186584050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186584103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8795;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186584297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186584403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186584434 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186584617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6063;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186584618 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6964;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186584624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0372;AVGPOST=0.9996;RSQ=0.9958;ERATE=0.0002;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 186584661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0055;AVGPOST=0.9984;RSQ=0.9046;ERATE=0.0003;THETA=0.0017;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186584758 . A ATT 185 PASS INDEL;BAVGPOST=0.993;BRSQ=0.509;LDAF=0.0247;AVGPOST=0.9726;RSQ=0.5623;ERATE=0.0030;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 186584760 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.592;LDAF=0.0147;AVGPOST=0.9851;RSQ=0.6121;ERATE=0.0020;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186584760 . A ATT 16826 PASS INDEL;BAVGPOST=0.971;BRSQ=0.921;LDAF=0.2086;AVGPOST=0.9657;RSQ=0.9285;ERATE=0.0039;THETA=0.0008;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 186584762 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.938;LDAF=0.1943;AVGPOST=0.9899;RSQ=0.9778;ERATE=0.0008;THETA=0.0026;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 186584863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6149;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186585067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2090;AVGPOST=0.9973;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 186585098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0378;AVGPOST=0.9985;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 186585145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.6863;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186585254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.777;LDAF=0.0123;AVGPOST=0.9964;RSQ=0.8726;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186585258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0373;AVGPOST=0.9995;RSQ=0.9931;ERATE=0.0003;THETA=0.0026;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 186585282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7969;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186585308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0078;AVGPOST=0.9985;RSQ=0.9202;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186585334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0376;AVGPOST=0.9985;RSQ=0.9863;ERATE=0.0003;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 186585501 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0072;AVGPOST=0.9987;RSQ=0.9173;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186585503 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.2102;AVGPOST=0.9934;RSQ=0.9846;ERATE=0.0011;THETA=0.0011;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 186585585 . GAA G 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6140;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186585586 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0067;AVGPOST=0.9991;RSQ=0.9428;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186585665 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.7944;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186585804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6875;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186585954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5841;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186586004 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9279;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186586017 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.859;LDAF=0.0078;AVGPOST=0.9982;RSQ=0.9206;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186586283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.837;LDAF=0.0271;AVGPOST=0.9931;RSQ=0.9103;ERATE=0.0004;THETA=0.0028;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 186586421 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0025;AVGPOST=0.9959;RSQ=0.3002;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186586468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.770;LDAF=0.0059;AVGPOST=0.9967;RSQ=0.7568;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186586609 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1229;AVGPOST=0.9972;RSQ=0.9903;ERATE=0.0006;THETA=0.0002;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 186586647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6029;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186586690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.692;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7604;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186586720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6491;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186586791 . CG C 2040 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9965;RSQ=0.9353;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 186586841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0247;AVGPOST=0.9971;RSQ=0.9560;ERATE=0.0002;THETA=0.0011;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 186586851 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.821;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6265;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186586971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186587031 . G GA 28 PASS INDEL;BAVGPOST=0.988;BRSQ=0.458;LDAF=0.0223;AVGPOST=0.9697;RSQ=0.4476;ERATE=0.0076;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186587040 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186587125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4662;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186587149 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1202;AVGPOST=0.9964;RSQ=0.9876;ERATE=0.0003;THETA=0.0005;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 186587183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2106;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 186587335 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9362;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186587543 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186587680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8329;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186587702 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186587816 . TG T 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5855;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186587908 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5127;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186588086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186588107 . CTAAT C 4285 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9984;RSQ=0.9705;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186588177 . G GC 131 PASS INDEL;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5649;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186588201 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.958;LDAF=0.0367;AVGPOST=0.9994;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 186588403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186588493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.910;LDAF=0.0185;AVGPOST=0.9979;RSQ=0.9536;ERATE=0.0005;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 186588510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186588661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.1175;AVGPOST=0.9894;RSQ=0.9626;ERATE=0.0016;THETA=0.0003;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 186588842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1189;AVGPOST=0.9970;RSQ=0.9883;ERATE=0.0004;THETA=0.0015;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 186588901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1190;AVGPOST=0.9988;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 186588984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2104;AVGPOST=0.9977;RSQ=0.9947;ERATE=0.0005;THETA=0.0009;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 186589123 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6488;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186589634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186589657 . A AT 903 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0080;AVGPOST=0.9982;RSQ=0.9182;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186589687 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5687;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186589861 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0172;AVGPOST=0.9995;RSQ=0.9881;ERATE=0.0003;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 186589987 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186590001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1221;AVGPOST=0.9972;RSQ=0.9895;ERATE=0.0003;THETA=0.0003;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 186590066 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7158;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186590326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186590375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9991;RSQ=0.9830;ERATE=0.0002;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186590387 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186590471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9563;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186590506 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8194;ERATE=0.0004;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186590664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6995;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186590761 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0002;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 186590781 rs113600686 A AT 25093 PASS INDEL;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2110;AVGPOST=0.9984;RSQ=0.9962;ERATE=0.0004;THETA=0.0007;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 186590786 . T TG 1286 PASS INDEL;BAVGPOST=0.923;BRSQ=0.715;LDAF=0.1430;AVGPOST=0.9296;RSQ=0.8138;ERATE=0.0016;THETA=0.0004;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 186590789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.735;LDAF=0.0035;AVGPOST=0.9977;RSQ=0.7376;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186590855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8833;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186590880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7865;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186591038 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5256;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186591057 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186591322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1926;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0006;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 186591398 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7543;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186591481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5517;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186591538 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0169;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0002;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 186591560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186591674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6231;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186591726 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186591727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7477;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186591773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9750;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186591834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0047;AVGPOST=0.9970;RSQ=0.7824;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186591900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0193;AVGPOST=0.9968;RSQ=0.9286;ERATE=0.0006;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 186591912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.961;LDAF=0.1188;AVGPOST=0.9934;RSQ=0.9753;ERATE=0.0005;THETA=0.0007;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 186592058 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4005;AVGPOST=0.9912;RSQ=0.9872;ERATE=0.0010;THETA=0.0004;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 186592098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186592133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0037;AVGPOST=0.9992;RSQ=0.9033;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186592158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186592191 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2044;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0002;THETA=0.0050;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 186592221 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186592245 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0178;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0002;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 186592255 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.6963;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186592304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186592363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.7237;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186592399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186592625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.0272;AVGPOST=0.9957;RSQ=0.9423;ERATE=0.0004;THETA=0.0008;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 186592636 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7245;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186592679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.969;LDAF=0.2518;AVGPOST=0.9888;RSQ=0.9780;ERATE=0.0009;THETA=0.0027;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 186592775 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0178;AVGPOST=0.9994;RSQ=0.9831;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 186592813 . AG A 8628 PASS INDEL;BAVGPOST=0.973;BRSQ=0.939;LDAF=0.2548;AVGPOST=0.9472;RSQ=0.9013;ERATE=0.0097;THETA=0.0004;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 186592881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5244;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186592885 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186592949 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186593021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9542;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186593084 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1186;AVGPOST=0.9986;RSQ=0.9947;ERATE=0.0004;THETA=0.0008;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 186593131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1187;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 186593142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5895;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186593207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0282;AVGPOST=0.9968;RSQ=0.9589;ERATE=0.0003;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 186593270 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186593366 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5839;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186593449 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.646;LDAF=0.0076;AVGPOST=0.9942;RSQ=0.6753;ERATE=0.0004;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186593452 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.969;LDAF=0.0775;AVGPOST=0.9909;RSQ=0.9573;ERATE=0.0014;THETA=0.0013;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 186593454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0214;AVGPOST=0.9946;RSQ=0.9053;ERATE=0.0007;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 186593525 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0043;AVGPOST=0.9968;RSQ=0.6731;ERATE=0.0006;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186593595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0439;AVGPOST=0.9926;RSQ=0.9393;ERATE=0.0004;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 186593827 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186594061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5418;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186594067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5165;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186594135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7605;ERATE=0.0002;THETA=0.0063;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186594182 . A AT 451 PASS INDEL;BAVGPOST=0.994;BRSQ=0.751;LDAF=0.0259;AVGPOST=0.9719;RSQ=0.5780;ERATE=0.0051;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 186594230 rs34631076 T TTTTA 14193 PASS INDEL;BAVGPOST=0.937;BRSQ=0.810;LDAF=0.1758;AVGPOST=0.9578;RSQ=0.9079;ERATE=0.0010;THETA=0.0003;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 186594243 . T TTTAG 5974 PASS INDEL;BAVGPOST=0.947;BRSQ=0.749;LDAF=0.1214;AVGPOST=0.9337;RSQ=0.7795;ERATE=0.0029;THETA=0.0004;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 186594244 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.842;LDAF=0.0162;AVGPOST=0.9947;RSQ=0.8779;ERATE=0.0004;THETA=0.0073;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 186594246 . A AT 51 PASS INDEL;BAVGPOST=0.933;BRSQ=0.602;LDAF=0.0615;AVGPOST=0.9513;RSQ=0.7087;ERATE=0.0006;THETA=0.0002;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 186594249 . T TA 402 PASS INDEL;BAVGPOST=0.934;BRSQ=0.607;LDAF=0.0629;AVGPOST=0.9532;RSQ=0.7327;ERATE=0.0006;THETA=0.0004;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 186594449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4800;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186594528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.930;LDAF=0.2467;AVGPOST=0.9838;RSQ=0.9693;ERATE=0.0007;THETA=0.0006;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 186594554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4872;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186594567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=0.9984;RSQ=0.9636;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186594665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6384;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186594789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9984;ERATE=0.0002;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186594876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186594940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186594979 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4127;AVGPOST=0.9895;RSQ=0.9839;ERATE=0.0031;THETA=0.0006;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 186595154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6299;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186595252 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9706;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186595254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0058;AVGPOST=0.9990;RSQ=0.9203;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186595268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0558;AVGPOST=0.9989;RSQ=0.9920;ERATE=0.0003;THETA=0.0014;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 186595288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7556;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186595291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0054;AVGPOST=0.9965;RSQ=0.7395;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186595362 . AGT A 614 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9087;ERATE=0.0003;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186595484 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7748;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186595548 . C CA 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5972;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186595558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0554;AVGPOST=0.9992;RSQ=0.9933;ERATE=0.0004;THETA=0.0004;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 186595582 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8262;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186595603 . T TTTA 14036 PASS INDEL;BAVGPOST=0.983;BRSQ=0.959;LDAF=0.2543;AVGPOST=0.9882;RSQ=0.9770;ERATE=0.0015;THETA=0.0010;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 186595689 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.5905;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186595714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.535;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5574;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186595839 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6629;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186596102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0357;AVGPOST=0.9990;RSQ=0.9894;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 186596197 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186596377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186596393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0045;AVGPOST=0.9997;RSQ=0.9668;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186596458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0065;AVGPOST=0.9962;RSQ=0.7802;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186596520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186596523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7396;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186596528 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0308;AVGPOST=0.9995;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 186596587 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186596597 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1913;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 186596630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1926;AVGPOST=0.9979;RSQ=0.9949;ERATE=0.0005;THETA=0.0008;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 186596659 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.6981;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186596702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186596738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5172;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186596922 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4126;AVGPOST=0.9962;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 186597077 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8412;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186597347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.586;LDAF=0.0039;AVGPOST=0.9961;RSQ=0.6225;ERATE=0.0007;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186597351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0031;AVGPOST=0.9978;RSQ=0.7134;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186597354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0128;AVGPOST=0.9974;RSQ=0.9112;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186597410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.8026;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186597415 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7873;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186597633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186597646 . AATT A 14066 PASS INDEL;BAVGPOST=0.995;BRSQ=0.974;LDAF=0.0963;AVGPOST=0.9963;RSQ=0.9837;ERATE=0.0006;THETA=0.0004;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 186597649 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186597750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1933;AVGPOST=0.9954;RSQ=0.9907;ERATE=0.0003;THETA=0.0017;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 186597843 . CTG C 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6556;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186597876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8316;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186597885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.980;LDAF=0.1914;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 186597917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6369;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186597983 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0356;AVGPOST=0.9974;RSQ=0.9713;ERATE=0.0004;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 186597998 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0049;AVGPOST=0.9959;RSQ=0.6810;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186597999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0005;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186598133 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186598211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2474;AVGPOST=0.9971;RSQ=0.9939;ERATE=0.0005;THETA=0.0005;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 186598226 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0544;AVGPOST=0.9989;RSQ=0.9913;ERATE=0.0004;THETA=0.0005;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 186598270 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7795;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186598298 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186598418 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9789;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186598420 . G GT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0032;AVGPOST=0.9976;RSQ=0.7163;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186598479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7594;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186598480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186598526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1211;AVGPOST=0.9979;RSQ=0.9915;ERATE=0.0004;THETA=0.0005;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 186598564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6231;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186598610 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1918;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0005;THETA=0.0010;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 186598682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6637;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186598807 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9997;RSQ=0.9963;ERATE=0.0002;THETA=0.0007;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 186598815 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0348;AVGPOST=0.9996;RSQ=0.9957;ERATE=0.0002;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 186598968 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186598987 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4867;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186599018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.8937;AVGPOST=0.9958;RSQ=0.9824;ERATE=0.0005;THETA=0.0003;AC=1953;AN=2184 GT:DS:GL:BD 0.89423078 1
1 186599053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8196;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186599164 . TA T 6081 PASS INDEL;BAVGPOST=0.974;BRSQ=0.929;LDAF=0.1931;AVGPOST=0.9579;RSQ=0.9087;ERATE=0.0059;THETA=0.0006;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 186599173 rs34760682 AT A 28174 PASS INDEL;BAVGPOST=0.992;BRSQ=0.976;LDAF=0.1906;AVGPOST=0.9979;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 186599199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186599224 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.971;LDAF=0.0942;AVGPOST=0.9942;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 186599336 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9853;ERATE=0.0002;THETA=0.0016;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186599370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9824;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186599404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9995;RSQ=0.1996;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186599515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0058;AVGPOST=0.9990;RSQ=0.9338;ERATE=0.0002;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186599524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2468;AVGPOST=0.9974;RSQ=0.9947;ERATE=0.0004;THETA=0.0007;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 186599542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0303;AVGPOST=0.9990;RSQ=0.9879;ERATE=0.0003;THETA=0.0007;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 186599542 . A ACC 10313 PASS INDEL;BAVGPOST=0.978;BRSQ=0.944;LDAF=0.2357;AVGPOST=0.9855;RSQ=0.9694;ERATE=0.0012;THETA=0.0003;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 186599543 rs3059375 C CCT 38242 PASS INDEL;BAVGPOST=0.987;BRSQ=0.972;LDAF=0.2460;AVGPOST=0.9957;RSQ=0.9910;ERATE=0.0005;THETA=0.0005;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 186599565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.0551;AVGPOST=0.9989;RSQ=0.9928;ERATE=0.0002;THETA=0.0009;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 186599828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1907;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 186599833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5897;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186599874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9995;RSQ=0.9840;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186599902 . GA G 114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5189;ERATE=0.0004;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186599937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8924;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186599964 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5442;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186600209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186600270 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186600314 rs34476994 ATGT A 23471 PASS INDEL;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.2098;AVGPOST=0.9870;RSQ=0.9699;ERATE=0.0004;THETA=0.0006;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 186600381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0141;AVGPOST=0.9991;RSQ=0.9769;ERATE=0.0002;THETA=0.0048;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186600471 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0002;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186600481 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1909;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 186600486 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1201;AVGPOST=0.9992;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 186600608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186600634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0041;AVGPOST=0.9983;RSQ=0.8516;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186600640 . G GA 145 PASS INDEL;BAVGPOST=0.975;BRSQ=0.519;LDAF=0.0544;AVGPOST=0.9271;RSQ=0.4448;ERATE=0.0129;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 186600660 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2456;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0005;THETA=0.0003;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 186600705 . AGAG A 1543 PASS INDEL;BAVGPOST=0.985;BRSQ=0.838;LDAF=0.0518;AVGPOST=0.9755;RSQ=0.8162;ERATE=0.0047;THETA=0.0007;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 186600708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.725;LDAF=0.1076;AVGPOST=0.9144;RSQ=0.6408;ERATE=0.0344;THETA=0.0006;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 186600728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.793;LDAF=0.0158;AVGPOST=0.9916;RSQ=0.7961;ERATE=0.0007;THETA=0.0019;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186600734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.716;LDAF=0.1182;AVGPOST=0.9005;RSQ=0.6173;ERATE=0.0318;THETA=0.0009;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 186600740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.885;BRSQ=0.624;LDAF=0.2505;AVGPOST=0.8410;RSQ=0.5841;ERATE=0.0959;THETA=0.0011;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 186600746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.607;LDAF=0.1112;AVGPOST=0.8955;RSQ=0.5697;ERATE=0.0262;THETA=0.0005;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 186600770 rs34876646 GAGA G 27830 PASS INDEL;BAVGPOST=0.985;BRSQ=0.355;LDAF=0.9693;AVGPOST=0.9555;RSQ=0.4145;ERATE=0.0048;THETA=0.0002;AC=2153;AN=2184 GT:DS:GL:BD 0.98580587 1
1 186600788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.570;LDAF=0.0237;AVGPOST=0.9714;RSQ=0.5142;ERATE=0.0048;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186600952 . A AC 250 PASS INDEL;BAVGPOST=0.998;BRSQ=0.654;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7429;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186600956 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.942;LDAF=0.2704;AVGPOST=0.9368;RSQ=0.8831;ERATE=0.0219;THETA=0.0003;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 186601009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186601073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.7635;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186601078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186601109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186601131 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9385;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186601141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2423;AVGPOST=0.9957;RSQ=0.9914;ERATE=0.0006;THETA=0.0003;AC=530;AN=2184 GT:DS:GL:BD 0.24267399 0
1 186601303 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186601452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186601476 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186601534 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0002;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186601688 . G GC 178 PASS INDEL;BAVGPOST=0.996;BRSQ=0.847;LDAF=0.0122;AVGPOST=0.9894;RSQ=0.6445;ERATE=0.0050;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186601716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2467;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 186601738 . T TG 30656 PASS INDEL;BAVGPOST=0.988;BRSQ=0.933;LDAF=0.8898;AVGPOST=0.9611;RSQ=0.8559;ERATE=0.0054;THETA=0.0046;AC=1963;AN=2184 GT:DS:GL:BD 0.89880955 1
1 186601742 rs67498903 G GC 90116 PASS INDEL;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.9117;AVGPOST=0.9926;RSQ=0.9636;ERATE=0.0004;THETA=0.0004;AC=1993;AN=2184 GT:DS:GL:BD 0.91254580 1
1 186601762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8758;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186601763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5967;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186601873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0054;AVGPOST=0.9966;RSQ=0.7778;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186602017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2447;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0007;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 186602234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186602237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186602240 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8809;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186602302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1907;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 186602408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0316;AVGPOST=0.9986;RSQ=0.9807;ERATE=0.0004;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 186602615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5740;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186602643 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2446;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0005;THETA=0.0007;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 186602721 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2450;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 186602737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4839;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186602759 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1213;AVGPOST=0.9985;RSQ=0.9939;ERATE=0.0002;THETA=0.0005;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 186602890 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186602922 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0122;AVGPOST=0.9989;RSQ=0.9579;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186602977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9329;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186602978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0287;AVGPOST=0.9984;RSQ=0.9776;ERATE=0.0004;THETA=0.0007;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 186603268 . TTG T 315 PASS INDEL;BAVGPOST=0.979;BRSQ=0.632;LDAF=0.0484;AVGPOST=0.9506;RSQ=0.5781;ERATE=0.0144;THETA=0.0010;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 186603322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9644;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186603408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9992;RSQ=0.9407;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186603410 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9644;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186603426 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2447;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 186603623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186603713 . TAC T 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5855;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186603734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5756;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186603762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5433;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186603861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4868;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186604245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0037;AVGPOST=0.9977;RSQ=0.7469;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186604252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186604451 . CT C 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6870;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186604505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1218;AVGPOST=0.9980;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 186604691 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1897;AVGPOST=0.9974;RSQ=0.9937;ERATE=0.0004;THETA=0.0004;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 186604763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5313;AVGPOST=0.9932;RSQ=0.9884;ERATE=0.0007;THETA=0.0009;AC=1161;AN=2184 GT:DS:GL:BD 0.53159338 1
1 186604790 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5348;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186604831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7407;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186604950 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6718;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186605049 . CAACTT C 338 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7732;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186605201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186605202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0311;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0002;THETA=0.0008;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 186605204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.4074;ERATE=0.0002;THETA=0.0011;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186605225 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6115;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186605257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6474;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186605303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186605404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4976;ERATE=0.0002;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186605474 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0036;AVGPOST=0.9995;RSQ=0.9349;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186605555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8450;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186605599 . TAC T 281 PASS INDEL;BAVGPOST=0.934;BRSQ=0.537;LDAF=0.0776;AVGPOST=0.9262;RSQ=0.6523;ERATE=0.0024;THETA=0.0004;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 186605601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.955;LDAF=0.2235;AVGPOST=0.9815;RSQ=0.9658;ERATE=0.0003;THETA=0.0005;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 186605602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.955;LDAF=0.2254;AVGPOST=0.9804;RSQ=0.9639;ERATE=0.0003;THETA=0.0014;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 186605707 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8771;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186605828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5796;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186605910 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0312;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0003;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 186605987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186606025 . A AT 76 PASS INDEL;BAVGPOST=0.998;BRSQ=0.717;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7707;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186606049 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186606050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2455;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0003;THETA=0.0013;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 186606237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9677;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186606266 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.828;LDAF=0.0056;AVGPOST=0.9967;RSQ=0.7689;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186606373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7280;ERATE=0.0003;THETA=0.0038;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186606445 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186606460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2452;AVGPOST=0.9973;RSQ=0.9948;ERATE=0.0004;THETA=0.0005;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 186606522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186606581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.906;BRSQ=0.757;LDAF=0.2092;AVGPOST=0.9180;RSQ=0.8238;ERATE=0.0068;THETA=0.0003;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 186606601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.850;BRSQ=0.484;LDAF=0.1877;AVGPOST=0.9259;RSQ=0.8327;ERATE=0.0010;THETA=0.0014;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 186606632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0045;AVGPOST=0.9968;RSQ=0.7046;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186606640 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.575;LDAF=0.0785;AVGPOST=0.9440;RSQ=0.7207;ERATE=0.0006;THETA=0.0005;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 186606643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.575;LDAF=0.0789;AVGPOST=0.9447;RSQ=0.7258;ERATE=0.0005;THETA=0.0035;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 186606645 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.792;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8558;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186606672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6344;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186606693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.875;LDAF=0.2186;AVGPOST=0.9708;RSQ=0.9436;ERATE=0.0008;THETA=0.0003;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 186606708 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.906;LDAF=0.1733;AVGPOST=0.9771;RSQ=0.9489;ERATE=0.0006;THETA=0.0035;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 186606712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0290;AVGPOST=0.9988;RSQ=0.9828;ERATE=0.0004;THETA=0.0015;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 186606716 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0343;AVGPOST=0.9989;RSQ=0.9884;ERATE=0.0004;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 186606717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0051;AVGPOST=0.9961;RSQ=0.7050;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186606748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.803;LDAF=0.0115;AVGPOST=0.9969;RSQ=0.8954;ERATE=0.0004;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186606778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9989;RSQ=0.9574;ERATE=0.0004;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186606784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8389;ERATE=0.0005;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186606840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.875;LDAF=0.0701;AVGPOST=0.9812;RSQ=0.8836;ERATE=0.0006;THETA=0.0005;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 186608335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.951;LDAF=0.0313;AVGPOST=0.9973;RSQ=0.9666;ERATE=0.0004;THETA=0.0007;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 186608351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0074;AVGPOST=0.9979;RSQ=0.8896;ERATE=0.0005;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186608401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7821;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186608417 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.7177;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186608458 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2457;AVGPOST=0.9976;RSQ=0.9947;ERATE=0.0004;THETA=0.0008;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 186608793 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.637;LDAF=0.0125;AVGPOST=0.9959;RSQ=0.8790;ERATE=0.0007;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186608795 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0129;AVGPOST=0.9951;RSQ=0.8455;ERATE=0.0005;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186609020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8316;ERATE=0.0004;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186609378 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8831;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186609961 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6874;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186609962 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4668;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186609993 . TGATA T 169 PASS INDEL;BAVGPOST=0.997;BRSQ=0.739;LDAF=0.0096;AVGPOST=0.9902;RSQ=0.5962;ERATE=0.0025;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186610014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8197;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186610075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.941;LDAF=0.0361;AVGPOST=0.9896;RSQ=0.8986;ERATE=0.0005;THETA=0.0004;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 186611584 . CA C 35 PASS INDEL;BAVGPOST=0.952;BRSQ=0.048;LDAF=0.0337;AVGPOST=0.9478;RSQ=0.3878;ERATE=0.0028;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 186611636 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186611646 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.948;LDAF=0.2316;AVGPOST=0.9854;RSQ=0.9713;ERATE=0.0005;THETA=0.0009;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 186611665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8787;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186611704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186612027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0325;AVGPOST=0.9996;RSQ=0.9952;ERATE=0.0003;THETA=0.0030;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 186612028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186612062 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186612194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0104;AVGPOST=0.9943;RSQ=0.7928;ERATE=0.0004;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186612215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0042;AVGPOST=0.9954;RSQ=0.5712;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186612223 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.833;LDAF=0.0551;AVGPOST=0.9802;RSQ=0.8463;ERATE=0.0009;THETA=0.0006;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 186612358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.923;BRSQ=0.737;LDAF=0.1575;AVGPOST=0.9523;RSQ=0.8803;ERATE=0.0013;THETA=0.0005;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 186612360 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0086;AVGPOST=0.9938;RSQ=0.7156;ERATE=0.0008;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186612386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.810;LDAF=0.2025;AVGPOST=0.9429;RSQ=0.8784;ERATE=0.0034;THETA=0.0007;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 186612501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186612593 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4148;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0005;THETA=0.0004;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 186612619 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5262;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186612640 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2858;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 186612650 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5467;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186612692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9106;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186612725 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2439;AVGPOST=0.9969;RSQ=0.9940;ERATE=0.0003;THETA=0.0007;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 186612773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7495;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186612805 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186612938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186613031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0002;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186613081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186613083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6457;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186613143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0545;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 186613305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186613404 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6696;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186613497 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0138;AVGPOST=0.9984;RSQ=0.9496;ERATE=0.0002;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186613530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186613601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5548;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186613620 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8643;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186613755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7212;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186613841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6617;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186613843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7809;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186613988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0002;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186614016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7100;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186614079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.8113;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186614080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6513;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186614095 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5341;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186614100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8321;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186614171 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0397;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0009;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 186614221 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9542;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186614293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0080;AVGPOST=0.9993;RSQ=0.9695;ERATE=0.0002;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186614367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6743;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186614383 . ATTC A 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6055;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186614430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1914;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0010;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 186614488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0037;AVGPOST=0.9985;RSQ=0.8396;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186614525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7230;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186614641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.5176;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186614642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186614689 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9211;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186614766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0064;AVGPOST=0.9965;RSQ=0.7880;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186614827 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0308;AVGPOST=0.9957;RSQ=0.9447;ERATE=0.0004;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 186614871 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186615087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7078;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186615152 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5914;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186615322 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6098;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186615586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7728;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186615587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6262;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186615613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7491;ERATE=0.0006;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186615634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186615716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6782;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186615740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0289;AVGPOST=0.9989;RSQ=0.9853;ERATE=0.0002;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 186615803 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1918;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 186615972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6789;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186615995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4164;AVGPOST=0.9954;RSQ=0.9930;ERATE=0.0005;THETA=0.0008;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 186616037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1116;AVGPOST=0.9939;RSQ=0.9744;ERATE=0.0003;THETA=0.0008;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 186616040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186616131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186616172 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6312;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186616202 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1935;AVGPOST=0.9973;RSQ=0.9944;ERATE=0.0003;THETA=0.0010;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 186616222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6534;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186616285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9986;RSQ=0.8967;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186616333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8109;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186616477 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1901;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0003;THETA=0.0008;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 186616599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1919;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0003;THETA=0.0074;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 186616611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186616745 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7058;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186616756 rs111893072 C CTTGA 38835 PASS INDEL;BAVGPOST=0.977;BRSQ=0.935;LDAF=0.1812;AVGPOST=0.9804;RSQ=0.9574;ERATE=0.0006;THETA=0.0006;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 186616758 . T TG 7676 PASS INDEL;BAVGPOST=0.973;BRSQ=0.923;LDAF=0.1734;AVGPOST=0.9796;RSQ=0.9548;ERATE=0.0005;THETA=0.0006;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 186616759 . A ATTC 209 PASS INDEL;BAVGPOST=0.918;BRSQ=0.527;LDAF=0.0799;AVGPOST=0.9340;RSQ=0.7220;ERATE=0.0005;THETA=0.0018;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 186616782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.742;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.7998;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186616910 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0386;AVGPOST=0.9983;RSQ=0.9850;ERATE=0.0004;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 186617052 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6227;ERATE=0.0004;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186617182 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9743;ERATE=0.0002;THETA=0.0019;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186617384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.707;LDAF=0.0090;AVGPOST=0.9923;RSQ=0.6524;ERATE=0.0007;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186617472 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.864;LDAF=0.1667;AVGPOST=0.9693;RSQ=0.9309;ERATE=0.0006;THETA=0.0007;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 186617478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.857;LDAF=0.1654;AVGPOST=0.9702;RSQ=0.9332;ERATE=0.0006;THETA=0.0009;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 186617622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8900;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186617683 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1895;AVGPOST=0.9980;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 186617693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9993;RSQ=0.9686;ERATE=0.0003;THETA=0.0023;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186617717 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1918;AVGPOST=0.9982;RSQ=0.9958;ERATE=0.0003;THETA=0.0008;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 186617777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6683;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186618042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186618057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.793;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8167;ERATE=0.0004;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186618134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6860;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186618135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5420;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186618328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0113;AVGPOST=0.9992;RSQ=0.9699;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186618329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0352;AVGPOST=0.9993;RSQ=0.9910;ERATE=0.0002;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 186618441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186618514 . CT C 2071 PASS INDEL;BAVGPOST=0.930;BRSQ=0.847;LDAF=0.2697;AVGPOST=0.9635;RSQ=0.9360;ERATE=0.0011;THETA=0.0020;AC=605;AN=2184 GT:DS:GL:BD 0.27701464 0
1 186618519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6076;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186618519 rs11289400 TA T 144 PASS INDEL;BAVGPOST=0.902;BRSQ=0.492;LDAF=0.0721;AVGPOST=0.9392;RSQ=0.6971;ERATE=0.0005;THETA=0.0006;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 186618563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186618699 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4167;AVGPOST=0.9928;RSQ=0.9889;ERATE=0.0006;THETA=0.0041;AC=912;AN=2184 GT:DS:GL:BD 0.41758242 0
1 186618840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.4675;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186618892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8046;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186618958 . C CA 445 PASS INDEL;BAVGPOST=0.997;BRSQ=0.700;LDAF=0.0059;AVGPOST=0.9957;RSQ=0.7063;ERATE=0.0008;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186619058 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8761;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186619067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8704;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186619075 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0002;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186619186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0059;AVGPOST=0.9985;RSQ=0.8889;ERATE=0.0004;THETA=0.0024;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186619190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.4179;AVGPOST=0.9850;RSQ=0.9766;ERATE=0.0012;THETA=0.0086;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 186619280 . CAGG C 337 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7666;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186619375 . AAAC A 343 PASS INDEL;BAVGPOST=0.994;BRSQ=0.768;LDAF=0.0121;AVGPOST=0.9928;RSQ=0.7769;ERATE=0.0009;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186619380 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186619387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0406;AVGPOST=0.9982;RSQ=0.9850;ERATE=0.0002;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 186619393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0060;AVGPOST=0.9981;RSQ=0.8844;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186619663 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186619764 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1038;AVGPOST=0.9981;RSQ=0.9911;ERATE=0.0005;THETA=0.0006;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 186619786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9663;ERATE=0.0003;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186619851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7760;ERATE=0.0003;THETA=0.0047;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186619852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.775;LDAF=0.9916;AVGPOST=0.9963;RSQ=0.8307;ERATE=0.0003;THETA=0.0013;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 186619866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6813;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186620001 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8565;ERATE=0.0003;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186620159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186620240 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0107;AVGPOST=0.9991;RSQ=0.9629;ERATE=0.0002;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186620245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1255;AVGPOST=0.9980;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 186620273 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0963;AVGPOST=0.9985;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 186620443 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6776;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186620535 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7363;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186620660 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186620928 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8234;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186620942 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0025;AVGPOST=0.9959;RSQ=0.3312;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186620984 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4912;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186621050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9995;RSQ=0.9716;ERATE=0.0003;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186621100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7329;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186621103 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2351;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0005;THETA=0.0006;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 186621186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186621231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9788;ERATE=0.0003;THETA=0.0015;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186621281 . A AC 169 PASS INDEL;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0038;AVGPOST=0.9966;RSQ=0.6599;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186621351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0065;AVGPOST=0.9972;RSQ=0.8082;ERATE=0.0006;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186621370 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186621381 . CTCTT C 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.4630;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186621413 . TTC T 85 PASS INDEL;BAVGPOST=0.995;BRSQ=0.576;LDAF=0.0067;AVGPOST=0.9928;RSQ=0.6085;ERATE=0.0007;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186621431 . C CTT 512 PASS INDEL;BAVGPOST=0.977;BRSQ=0.478;LDAF=0.0401;AVGPOST=0.9637;RSQ=0.6509;ERATE=0.0022;THETA=0.0032;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 186621433 . TTC T 412 PASS INDEL;BAVGPOST=0.910;BRSQ=0.159;LDAF=0.1236;AVGPOST=0.8409;RSQ=0.4046;ERATE=0.0060;THETA=0.0008;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 186621435 . C CT 75 PASS INDEL;BAVGPOST=0.931;BRSQ=0.053;LDAF=0.1532;AVGPOST=0.7836;RSQ=0.3288;ERATE=0.0093;THETA=0.0012;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 186621440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.439;LDAF=0.0063;AVGPOST=0.9920;RSQ=0.5132;ERATE=0.0009;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186621441 . TTC T 2625 PASS INDEL;BAVGPOST=0.964;BRSQ=0.687;LDAF=0.0584;AVGPOST=0.9676;RSQ=0.8128;ERATE=0.0027;THETA=0.0019;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 186621459 . C CT 134 PASS INDEL;BAVGPOST=0.991;BRSQ=0.484;LDAF=0.0240;AVGPOST=0.9683;RSQ=0.4791;ERATE=0.0051;THETA=0.0015;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186621517 . TTTCC T 13964 PASS INDEL;BAVGPOST=0.988;BRSQ=0.960;LDAF=0.1194;AVGPOST=0.9863;RSQ=0.9627;ERATE=0.0014;THETA=0.0019;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 186621528 . CCTT C 1249 PASS INDEL;BAVGPOST=0.943;BRSQ=0.673;LDAF=0.1480;AVGPOST=0.8341;RSQ=0.4836;ERATE=0.0149;THETA=0.0013;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 186621541 . TTTCC T 249 PASS INDEL;BAVGPOST=0.996;BRSQ=0.442;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5636;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186621598 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.756;LDAF=0.0084;AVGPOST=0.9967;RSQ=0.8297;ERATE=0.0005;THETA=0.0014;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186621687 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6624;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186621718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186621890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186622353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8122;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186622419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9364;ERATE=0.0002;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186622484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6611;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186622561 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5682;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186622562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186622572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0002;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186622738 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0412;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0002;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 186622837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186623034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2357;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 186623038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186623058 . AAG A 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186623091 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186623304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8967;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186623332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186623344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9880;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186623429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8104;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186623470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1035;AVGPOST=0.9982;RSQ=0.9944;ERATE=0.0002;THETA=0.0010;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 186623581 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0285;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0003;THETA=0.0008;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 186623660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0114;AVGPOST=0.9987;RSQ=0.9490;ERATE=0.0004;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186623721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9031;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186623762 rs72503146 A AG 80763 PASS INDEL;BAVGPOST=0.987;BRSQ=0.531;LDAF=0.9838;AVGPOST=0.9804;RSQ=0.5462;ERATE=0.0035;THETA=0.0010;AC=2157;AN=2184 GT:DS:GL:BD 0.98763734 1
1 186623810 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2354;AVGPOST=0.9986;RSQ=0.9969;ERATE=0.0006;THETA=0.0016;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 186623831 . C CA 494 PASS INDEL;BAVGPOST=0.952;BRSQ=0.476;LDAF=0.0879;AVGPOST=0.8875;RSQ=0.4168;ERATE=0.0267;THETA=0.0009;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 186623874 . AAAAG A 1782 PASS INDEL;BAVGPOST=0.992;BRSQ=0.754;LDAF=0.0172;AVGPOST=0.9932;RSQ=0.8475;ERATE=0.0010;THETA=0.0010;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186623893 . G GGAAA 215 PASS INDEL;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0031;AVGPOST=0.9971;RSQ=0.5923;ERATE=0.0007;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186623904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5749;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186623979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8538;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186623980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6532;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186623990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186623994 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0099;AVGPOST=0.9992;RSQ=0.9631;ERATE=0.0002;THETA=0.0018;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186624006 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2346;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0003;THETA=0.0009;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 186624325 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186624335 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6769;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186624403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.541;LDAF=0.0037;AVGPOST=0.9968;RSQ=0.6424;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186624404 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6113;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186624445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0118;AVGPOST=0.9947;RSQ=0.8549;ERATE=0.0003;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186624505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9883;ERATE=0.0002;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186624584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8317;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186624731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.880;LDAF=0.0107;AVGPOST=0.9983;RSQ=0.9408;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186624868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.864;LDAF=0.0136;AVGPOST=0.9937;RSQ=0.8324;ERATE=0.0006;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186624916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0212;AVGPOST=0.9989;RSQ=0.9829;ERATE=0.0002;THETA=0.0013;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 186625025 rs112088620 AT A 950 PASS INDEL;BAVGPOST=0.988;BRSQ=0.771;LDAF=0.0342;AVGPOST=0.9726;RSQ=0.6744;ERATE=0.0070;THETA=0.0009;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 186625114 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186625117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.3492;ERATE=0.0002;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186625139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0046;AVGPOST=0.9976;RSQ=0.7891;ERATE=0.0009;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186625165 rs113463025 GGGAAGT G 1061 PASS INDEL;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0093;AVGPOST=0.9994;RSQ=0.9733;ERATE=0.0002;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186625247 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186625258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8240;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186625266 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.8044;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186625288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0002;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186625361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9928;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186625438 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6203;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186625477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186625481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0042;AVGPOST=0.9963;RSQ=0.6255;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186625563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0102;AVGPOST=0.9987;RSQ=0.9425;ERATE=0.0003;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186625564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.4650;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186625638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.977;LDAF=0.2344;AVGPOST=0.9947;RSQ=0.9893;ERATE=0.0011;THETA=0.0008;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 186625661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0061;AVGPOST=0.9979;RSQ=0.8538;ERATE=0.0005;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186625757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5377;ERATE=0.0005;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186625763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6579;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186625888 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9741;ERATE=0.0003;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186625906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6954;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186625947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8972;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186625973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186626014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186626028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5302;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186626067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7690;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186626073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1113;AVGPOST=0.9978;RSQ=0.9927;ERATE=0.0006;THETA=0.0006;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 186626230 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0127;AVGPOST=0.9995;RSQ=0.9867;ERATE=0.0003;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186626277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186626309 . TAC T 25099 PASS INDEL;BAVGPOST=0.958;BRSQ=0.424;LDAF=0.9322;AVGPOST=0.9068;RSQ=0.4014;ERATE=0.0213;THETA=0.0008;AC=2114;AN=2184 GT:DS:GL:BD 0.96794873 1
1 186626460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186626465 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2355;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0004;THETA=0.0017;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 186626655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6489;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186626750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9315;ERATE=0.0002;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186626922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6692;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186626954 . TTTTC T 709 PASS INDEL;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0216;AVGPOST=0.9961;RSQ=0.9247;ERATE=0.0006;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 186627128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.827;LDAF=0.0106;AVGPOST=0.9963;RSQ=0.8616;ERATE=0.0004;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186627129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6170;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186627209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1050;AVGPOST=0.9964;RSQ=0.9855;ERATE=0.0007;THETA=0.0010;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 186627256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1146;AVGPOST=0.9980;RSQ=0.9939;ERATE=0.0004;THETA=0.0013;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 186627262 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9612;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186627299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1133;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0004;THETA=0.0009;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 186627353 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186627402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186627620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8417;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186627625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186627670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9335;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186627694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186627701 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0127;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0002;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186627791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6862;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186627831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0968;AVGPOST=0.9990;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 186627841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.8020;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186627929 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0101;AVGPOST=0.9989;RSQ=0.9548;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186627982 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9602;ERATE=0.0002;THETA=0.0020;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186628004 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6247;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186628123 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186628211 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186628222 rs68087622 AT A 22564 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2354;AVGPOST=0.9979;RSQ=0.9952;ERATE=0.0004;THETA=0.0005;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 186628263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186628282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9272;ERATE=0.0003;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186628312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0505;AVGPOST=0.9989;RSQ=0.9919;ERATE=0.0004;THETA=0.0013;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 186628341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186628487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186628579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186628610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9474;ERATE=0.0002;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186628647 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186628799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186628821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186628938 . ATCAAAAAGGTAG A 671 PASS INDEL;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186629008 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1120;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0002;THETA=0.0008;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 186629288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9690;ERATE=0.0002;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186629403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186629433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6359;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186629481 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5558;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186629504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4837;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186629606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0033;AVGPOST=0.9985;RSQ=0.8238;ERATE=0.0003;THETA=0.0029;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186629607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186629623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.866;LDAF=0.0096;AVGPOST=0.9981;RSQ=0.9323;ERATE=0.0003;THETA=0.0014;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186629757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6467;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186629761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0352;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0002;THETA=0.0013;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 186629770 rs113299751 G GTTTTCT 14646 PASS INDEL;BAVGPOST=0.982;BRSQ=0.938;LDAF=0.1149;AVGPOST=0.9877;RSQ=0.9624;ERATE=0.0015;THETA=0.0006;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 186629798 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.902;LDAF=0.0291;AVGPOST=0.9928;RSQ=0.9173;ERATE=0.0004;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 186629865 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0362;AVGPOST=0.9967;RSQ=0.9698;ERATE=0.0004;THETA=0.0007;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 186629975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.963;LDAF=0.3327;AVGPOST=0.9785;RSQ=0.9646;ERATE=0.0009;THETA=0.0005;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 186630038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7848;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186630343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0139;AVGPOST=0.9989;RSQ=0.9674;ERATE=0.0002;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186630374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7708;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186630461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186630632 . TAGAC T 2374 PASS INDEL;BAVGPOST=0.997;BRSQ=0.905;LDAF=0.0123;AVGPOST=0.9974;RSQ=0.9238;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186630711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8933;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186630743 . TAC T 13 PASS INDEL;BAVGPOST=0.996;BRSQ=0.688;LDAF=0.0149;AVGPOST=0.9822;RSQ=0.5380;ERATE=0.0032;THETA=0.0041;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186630821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.4969;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186630838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.6360;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186630857 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0966;AVGPOST=0.9978;RSQ=0.9891;ERATE=0.0005;THETA=0.0005;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 186630871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.7985;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186630874 . CT C 122 PASS INDEL;BAVGPOST=0.998;BRSQ=0.744;LDAF=0.0047;AVGPOST=0.9959;RSQ=0.6614;ERATE=0.0006;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186630884 . G GT 10977 PASS INDEL;BAVGPOST=0.956;BRSQ=0.896;LDAF=0.2726;AVGPOST=0.8653;RSQ=0.7472;ERATE=0.0123;THETA=0.0008;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 186630943 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.866;LDAF=0.0316;AVGPOST=0.9938;RSQ=0.9273;ERATE=0.0007;THETA=0.0010;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 186630955 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0103;AVGPOST=0.9978;RSQ=0.9125;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186630957 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0117;AVGPOST=0.9962;RSQ=0.8639;ERATE=0.0005;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186630971 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0105;AVGPOST=0.9950;RSQ=0.8024;ERATE=0.0010;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186631039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9983;RSQ=0.1459;ERATE=0.0005;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186631048 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0049;AVGPOST=0.9972;RSQ=0.7827;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186631168 . GTTC G 472 PASS INDEL;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0049;AVGPOST=0.9972;RSQ=0.7705;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186631315 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0004;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186631546 . C CT 567 PASS INDEL;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0044;AVGPOST=0.9976;RSQ=0.7903;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186631560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6043;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186631580 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186631696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186631725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5360;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186631743 rs16686 C CAA 49796 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3582;AVGPOST=0.9936;RSQ=0.9891;ERATE=0.0005;THETA=0.0008;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 186631755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0031;AVGPOST=0.9974;RSQ=0.6767;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186631760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186631802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9369;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186631809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8663;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186631912 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6672;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186631932 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0217;AVGPOST=0.9990;RSQ=0.9806;ERATE=0.0002;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 186631936 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5693;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186632005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9857;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186632112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186632115 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7778;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186632118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0043;AVGPOST=0.9981;RSQ=0.8390;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186632200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0080;AVGPOST=0.9966;RSQ=0.8560;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186632233 . T TC 884 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0141;AVGPOST=0.9989;RSQ=0.9657;ERATE=0.0005;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186632238 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186632245 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5107;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186632287 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1312;AVGPOST=0.9984;RSQ=0.9952;ERATE=0.0006;THETA=0.0008;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 186632317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1201;AVGPOST=0.9969;RSQ=0.9884;ERATE=0.0003;THETA=0.0004;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 186632353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4342;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186632455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9701;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186632591 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186632601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9985;RSQ=0.9487;ERATE=0.0002;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186632749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186632768 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186632810 . G GA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4177;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186632911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186632967 . GAT G 113 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6875;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186632997 . TGTGA T 227 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7725;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186633004 . TTG T 253 PASS INDEL;BAVGPOST=0.981;BRSQ=0.651;LDAF=0.0421;AVGPOST=0.9576;RSQ=0.5592;ERATE=0.0194;THETA=0.0010;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 186633054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186633061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9939;ERATE=0.0002;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186633085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186633101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186633163 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.610;LDAF=0.0372;AVGPOST=0.9611;RSQ=0.5811;ERATE=0.0132;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 186633320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7528;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186633351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0095;AVGPOST=0.9990;RSQ=0.9537;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186633424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.8992;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186633469 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.655;LDAF=0.0047;AVGPOST=0.9973;RSQ=0.7667;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186633511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7189;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186633512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.780;LDAF=0.0090;AVGPOST=0.9950;RSQ=0.8025;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186633534 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7670;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186633713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5816;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186633738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0964;AVGPOST=0.9984;RSQ=0.9935;ERATE=0.0002;THETA=0.0005;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 186633749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.909;LDAF=0.0139;AVGPOST=0.9963;RSQ=0.9016;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186633754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9095;AVGPOST=0.9947;RSQ=0.9724;ERATE=0.0004;THETA=0.0013;AC=1986;AN=2184 GT:DS:GL:BD 0.90934068 1
1 186633764 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186633809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5571;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186633933 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0002;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186633991 . TAA T 75 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5184;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186634036 . GA G 75 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9972;RSQ=0.5394;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186634090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186634163 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6441;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186634204 . AT A 442 PASS INDEL;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0054;AVGPOST=0.9978;RSQ=0.8432;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186634270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0092;AVGPOST=0.9980;RSQ=0.9125;ERATE=0.0006;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186634374 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186634410 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.4605;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186634506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0106;AVGPOST=0.9957;RSQ=0.8475;ERATE=0.0007;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186634525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0096;AVGPOST=0.9987;RSQ=0.9394;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186634538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5338;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186634542 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2310;AVGPOST=0.9966;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 186634553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0081;AVGPOST=0.9978;RSQ=0.8953;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186634559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0080;AVGPOST=0.9980;RSQ=0.9074;ERATE=0.0002;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186634637 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7066;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186634671 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9449;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186634715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8066;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186634883 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1033;AVGPOST=0.9983;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 186634912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6366;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186634936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7797;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186635095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1205;AVGPOST=0.9956;RSQ=0.9826;ERATE=0.0003;THETA=0.0004;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 186635119 . A AC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5557;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186635190 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186635199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1230;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 186635309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7550;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186635324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8806;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186635457 . C CA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186635473 . TG T 506 PASS INDEL;BAVGPOST=0.984;BRSQ=0.677;LDAF=0.0311;AVGPOST=0.9745;RSQ=0.6900;ERATE=0.0048;THETA=0.0009;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 186635474 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1083;AVGPOST=0.9969;RSQ=0.9901;ERATE=0.0006;THETA=0.0008;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 186635493 . C CA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7315;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186635499 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1141;AVGPOST=0.9971;RSQ=0.9917;ERATE=0.0004;THETA=0.0006;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 186635552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.877;LDAF=0.0132;AVGPOST=0.9963;RSQ=0.8926;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186635562 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0002;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186635577 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186635685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6265;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186635728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8989;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186635747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0058;AVGPOST=0.9991;RSQ=0.9418;ERATE=0.0002;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186635938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9524;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186635993 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7292;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186636060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1126;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0008;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 186636194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186636196 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7521;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186636280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9858;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186636288 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0324;AVGPOST=0.9988;RSQ=0.9855;ERATE=0.0003;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 186636307 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0353;AVGPOST=0.9985;RSQ=0.9830;ERATE=0.0004;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 186636331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4468;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186636343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0066;AVGPOST=0.9930;RSQ=0.5829;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186636365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7841;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186636392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7501;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186636417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4401;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186636517 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0058;AVGPOST=0.9985;RSQ=0.9110;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186636661 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4517;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186636920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0427;AVGPOST=0.9978;RSQ=0.9829;ERATE=0.0004;THETA=0.0006;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 186637006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0100;AVGPOST=0.9987;RSQ=0.9490;ERATE=0.0002;THETA=0.0014;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186637088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1125;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0012;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 186637168 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186637180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9477;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186637208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5511;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186637245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186637651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5650;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186637771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0096;AVGPOST=0.9990;RSQ=0.9618;ERATE=0.0003;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186637813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0115;AVGPOST=0.9987;RSQ=0.9513;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186637896 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0501;AVGPOST=0.9991;RSQ=0.9928;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 186637923 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.820;LDAF=0.0332;AVGPOST=0.9889;RSQ=0.8843;ERATE=0.0003;THETA=0.0010;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 186637942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8231;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186637951 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0018;AVGPOST=0.9971;RSQ=0.3908;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186638016 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8404;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186638038 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9996;RSQ=0.9834;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186638108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186638119 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7650;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186638125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8425;ERATE=0.0003;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186638199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.5806;ERATE=0.0006;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186638264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1225;AVGPOST=0.9982;RSQ=0.9951;ERATE=0.0003;THETA=0.0008;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 186638298 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5413;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186638375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186638384 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186638476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8359;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186638500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8344;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186638701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.679;LDAF=0.0046;AVGPOST=0.9953;RSQ=0.5855;ERATE=0.0015;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186638821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5331;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186638945 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9024;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186638966 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5531;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186639003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6510;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186639105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8628;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186639215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9765;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186639236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7059;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186639243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0059;AVGPOST=0.9981;RSQ=0.8549;ERATE=0.0005;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186639287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9210;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186639294 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6178;ERATE=0.0004;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186639322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8444;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186639365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5694;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186639369 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9990;RSQ=0.9595;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186639374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.584;LDAF=0.0183;AVGPOST=0.9806;RSQ=0.5849;ERATE=0.0042;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186639403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0129;AVGPOST=0.9984;RSQ=0.9469;ERATE=0.0003;THETA=0.0022;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186639447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6213;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186639460 . A AT 544 PASS INDEL;BAVGPOST=0.955;BRSQ=0.636;LDAF=0.0645;AVGPOST=0.9729;RSQ=0.8485;ERATE=0.0015;THETA=0.0006;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 186639485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7076;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186639508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5788;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186639559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186639589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186639591 . TG T 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186639660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186639718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9812;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186639767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4595;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186639795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0001;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0002;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186639800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186640428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9928;ERATE=0.0002;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186640439 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5377;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186640525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0154;AVGPOST=0.9976;RSQ=0.9327;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186640566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186640585 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7136;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186640614 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9995;RSQ=0.9840;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186640617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2339;AVGPOST=0.9976;RSQ=0.9950;ERATE=0.0004;THETA=0.0006;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 186640638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186640673 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4627;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186640692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7881;ERATE=0.0002;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186640702 . TGC T 1405 PASS INDEL;BAVGPOST=0.989;BRSQ=0.940;LDAF=0.0949;AVGPOST=0.9927;RSQ=0.9674;ERATE=0.0005;THETA=0.0005;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 186640703 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0968;AVGPOST=0.9954;RSQ=0.9816;ERATE=0.0003;THETA=0.0004;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 186640704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0971;AVGPOST=0.9947;RSQ=0.9791;ERATE=0.0003;THETA=0.0004;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 186640796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186640821 rs4648305 AT A 1371 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0143;AVGPOST=0.9986;RSQ=0.9559;ERATE=0.0003;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186640853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0285;AVGPOST=0.9992;RSQ=0.9880;ERATE=0.0003;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 186641058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1308;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0003;THETA=0.0008;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 186641104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4721;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186641126 . T TA 13366 PASS INDEL;BAVGPOST=0.992;BRSQ=0.468;LDAF=0.9731;AVGPOST=0.9631;RSQ=0.4916;ERATE=0.0025;THETA=0.0007;AC=2143;AN=2184 GT:DS:GL:BD 0.98122710 1
1 186641157 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5095;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186641197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186641198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.810;LDAF=0.0114;AVGPOST=0.9967;RSQ=0.8789;ERATE=0.0008;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186641218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0130;AVGPOST=0.9972;RSQ=0.9025;ERATE=0.0004;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186641265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0117;AVGPOST=0.9975;RSQ=0.9017;ERATE=0.0009;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186641273 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.801;LDAF=0.0272;AVGPOST=0.9900;RSQ=0.8571;ERATE=0.0004;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 186641281 . TCAA T 39 PASS INDEL;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0043;AVGPOST=0.9956;RSQ=0.5855;ERATE=0.0008;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186641297 . ATACTATTATCTG A 1165 PASS INDEL;BAVGPOST=0.998;BRSQ=0.726;LDAF=0.0046;AVGPOST=0.9955;RSQ=0.6051;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186641318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8491;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186641358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9619;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186641396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7607;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186641411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186641577 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8292;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186641626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9997;AVGPOST=0.9995;RSQ=0.0495;ERATE=0.0003;THETA=0.0005;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 186641628 rs3835508 TA T 1020 PASS INDEL;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0142;AVGPOST=0.9957;RSQ=0.8769;ERATE=0.0004;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186641647 rs67014492 C CA 12160 PASS INDEL;BAVGPOST=0.981;BRSQ=0.939;LDAF=0.1245;AVGPOST=0.9596;RSQ=0.8852;ERATE=0.0091;THETA=0.0005;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 186641682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=0.9991;RSQ=0.9548;ERATE=0.0004;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186641840 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186641887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7823;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186641902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7000;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186641919 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5494;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186641980 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.543;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186642025 . C CT 31 PASS INDEL;BAVGPOST=0.987;BRSQ=0.507;LDAF=0.0247;AVGPOST=0.9673;RSQ=0.4833;ERATE=0.0059;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186642059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8085;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186642068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8679;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186642150 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8427;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186642182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8663;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186642183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7778;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186642331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186642389 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5687;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186642429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.9575;AVGPOST=0.9976;RSQ=0.9755;ERATE=0.0003;THETA=0.0012;AC=2091;AN=2184 GT:DS:GL:BD 0.95741761 1
1 186642604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.576;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7887;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186642744 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5439;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186642807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0061;AVGPOST=0.9979;RSQ=0.8841;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186642856 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9857;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186642891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7487;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186642987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0499;AVGPOST=0.9980;RSQ=0.9875;ERATE=0.0003;THETA=0.0007;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 186643058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3584;AVGPOST=0.9869;RSQ=0.9784;ERATE=0.0009;THETA=0.0006;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 186643116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4402;ERATE=0.0005;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186643203 rs36233646 TTATAA T 18426 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1129;AVGPOST=0.9984;RSQ=0.9944;ERATE=0.0005;THETA=0.0009;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 186643238 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9577;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186643275 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186643541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186643545 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0041;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186643768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0002;THETA=0.0029;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186643803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186643853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186643928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8407;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186643950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0498;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0037;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 186643959 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186644120 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186644137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0116;AVGPOST=0.9993;RSQ=0.9711;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186644195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9593;ERATE=0.0002;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186644208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0106;AVGPOST=0.9995;RSQ=0.9754;ERATE=0.0004;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186644282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0002;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186644308 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0077;AVGPOST=1.0000;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186644309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0105;AVGPOST=0.9997;RSQ=0.9877;ERATE=0.0002;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186644325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9603;ERATE=0.0009;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186644331 rs4648280 A AAAAC 333 PASS INDEL;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8174;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186644351 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0021;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186644632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186644794 rs4648277 AC A 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186644854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186644917 rs3218626 CT C 38 PASS INDEL;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6837;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186645078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186645087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186645119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186645282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186645312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186645375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186645384 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8818;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186645418 . GT G 166 PASS INDEL;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.8022;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186645488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1033;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0006;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 186645669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186645828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186645851 rs71828189 AAAAT A 1424 PASS INDEL;BAVGPOST=0.995;BRSQ=0.872;LDAF=0.0227;AVGPOST=0.9895;RSQ=0.8274;ERATE=0.0008;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 186645854 rs71828189 AT A 352 PASS INDEL;BAVGPOST=0.995;BRSQ=0.851;LDAF=0.0188;AVGPOST=0.9926;RSQ=0.8514;ERATE=0.0002;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 186645927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1582;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0008;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 186646005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186646058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7706;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186646323 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2341;AVGPOST=0.9981;RSQ=0.9960;ERATE=0.0004;THETA=0.0009;AC=510;AN=2184 GT:DS:GL:BD 0.23351648 0
1 186646407 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5943;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186646409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7466;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186646480 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0413;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0002;THETA=0.0047;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 186646503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186646578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0498;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0002;THETA=0.0008;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 186646586 rs4648272 CTG C 11783 PASS INDEL;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1049;AVGPOST=0.9880;RSQ=0.9558;ERATE=0.0018;THETA=0.0005;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 186646590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186646594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186646693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186646746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9533;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186646784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186647138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0603;AVGPOST=0.9969;RSQ=0.9790;ERATE=0.0003;THETA=0.0005;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 186647177 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7172;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186647206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9516;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186647241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186647267 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186647384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186647418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186647454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186647559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186647609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=1.0000;RSQ=0.9978;ERATE=0.0002;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186648024 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186648073 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9882;ERATE=0.0002;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186648157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186648197 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0941;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0008;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 186648232 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186648316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186648355 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186648372 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186648408 . TG T 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7953;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186648417 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=0.9920;ERATE=0.0002;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186648749 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186648768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7872;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186648983 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6009;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186649004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.809;LDAF=0.0160;AVGPOST=0.9932;RSQ=0.8351;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186649009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186649071 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5817;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186649098 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9849;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186649159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8696;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186649216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6108;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186649221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.8606;AVGPOST=0.9930;RSQ=0.9783;ERATE=0.0005;THETA=0.0003;AC=1879;AN=2184 GT:DS:GL:BD 0.86034799 1
1 186649226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0052;AVGPOST=0.9977;RSQ=0.8365;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186649300 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186649335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0041;AVGPOST=0.9966;RSQ=0.6785;ERATE=0.0008;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186649366 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186649441 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.4267;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186649540 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186649547 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9996;RSQ=0.9778;ERATE=0.0003;THETA=0.0038;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186649618 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.844;LDAF=0.0089;AVGPOST=0.9972;RSQ=0.8879;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186649668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.4012;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186649714 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5526;ERATE=0.0003;THETA=0.0053;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186649719 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9534;ERATE=0.0003;THETA=0.0015;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186650048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5651;ERATE=0.0004;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186650068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0128;AVGPOST=0.9983;RSQ=0.9552;ERATE=0.0003;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186650163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0289;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0002;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 186650210 rs20418 G GCTA 2964 PASS INDEL;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0156;AVGPOST=0.9988;RSQ=0.9637;ERATE=0.0005;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186650270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8856;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186650321 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1751;AVGPOST=0.9957;RSQ=0.9883;ERATE=0.0005;THETA=0.0006;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 186650373 rs4648255 ATAGT A 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8083;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186650434 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8329;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186650435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186650461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5961;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186650514 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6166;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186650577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7021;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186650609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7593;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186650662 . T TG 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7041;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186650688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0290;AVGPOST=0.9995;RSQ=0.9930;ERATE=0.0003;THETA=0.0006;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 186650695 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186650707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0404;AVGPOST=0.9995;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 186650742 . T TG 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4891;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186650751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.2534;AVGPOST=0.9861;RSQ=0.9731;ERATE=0.0009;THETA=0.0005;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 186650846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1177;AVGPOST=0.9988;RSQ=0.9957;ERATE=0.0003;THETA=0.0007;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 186650876 rs72366725 TAC T 6835 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0737;AVGPOST=0.9979;RSQ=0.9875;ERATE=0.0005;THETA=0.0006;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 186650998 rs4648252 GA G 776 PASS INDEL;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0094;AVGPOST=0.9980;RSQ=0.9311;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186650999 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0043;AVGPOST=0.9969;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186651032 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9863;ERATE=0.0002;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186651083 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0776;AVGPOST=0.9992;RSQ=0.9959;ERATE=0.0004;THETA=0.0006;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 186651144 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8230;ERATE=0.0008;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186651296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.924;LDAF=0.0282;AVGPOST=0.9963;RSQ=0.9456;ERATE=0.0004;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 186651611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0728;AVGPOST=0.9970;RSQ=0.9849;ERATE=0.0003;THETA=0.0005;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 186651620 rs113450246 CA C 5674 PASS INDEL;BAVGPOST=0.984;BRSQ=0.912;LDAF=0.0980;AVGPOST=0.9537;RSQ=0.8124;ERATE=0.0074;THETA=0.0008;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 186651723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0145;AVGPOST=0.9994;RSQ=0.9802;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186651840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8594;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186651876 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.964;LDAF=0.1948;AVGPOST=0.9815;RSQ=0.9550;ERATE=0.0005;THETA=0.0007;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 186651932 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0243;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0002;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 186651992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9987;RSQ=0.9418;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186652002 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.8969;AVGPOST=0.9918;RSQ=0.9660;ERATE=0.0005;THETA=0.0006;AC=1960;AN=2184 GT:DS:GL:BD 0.89743590 1
1 186652175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0584;AVGPOST=0.9993;RSQ=0.9951;ERATE=0.0003;THETA=0.0010;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 186652313 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8760;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186652382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7810;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186652392 rs34984585 TC T 1719 PASS INDEL;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.0934;AVGPOST=0.9936;RSQ=0.9759;ERATE=0.0003;THETA=0.0005;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 186652394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0935;AVGPOST=0.9939;RSQ=0.9766;ERATE=0.0003;THETA=0.0002;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 186652395 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1085;AVGPOST=0.9939;RSQ=0.9796;ERATE=0.0003;THETA=0.0005;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 186652458 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7495;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186652602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186652720 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8175;ERATE=0.0004;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186652822 . A AT 484 PASS INDEL;BAVGPOST=0.989;BRSQ=0.558;LDAF=0.0223;AVGPOST=0.9713;RSQ=0.4929;ERATE=0.0062;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186652918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7805;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186652942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0636;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0002;THETA=0.0002;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 186652952 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1884;AVGPOST=0.9987;RSQ=0.9965;ERATE=0.0003;THETA=0.0010;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 186653033 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1026;AVGPOST=0.9994;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 186653050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6448;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186653091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.5760;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186653183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186653255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5972;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186653327 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8608;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186653366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4393;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186653428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9681;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186653447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6712;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186653495 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9172;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186653526 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186653530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.977;LDAF=0.1174;AVGPOST=0.9986;RSQ=0.9946;ERATE=0.0004;THETA=0.0004;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 186653539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0403;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0012;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 186653550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.1174;AVGPOST=0.9986;RSQ=0.9943;ERATE=0.0003;THETA=0.0007;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 186653622 . C CT 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8604;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186653629 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186653630 . C CA 54 PASS INDEL;BAVGPOST=0.997;BRSQ=0.765;LDAF=0.0108;AVGPOST=0.9894;RSQ=0.6098;ERATE=0.0008;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186653765 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2406;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 186653787 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1895;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 186653817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6407;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186653850 rs34290361 TA T 13920 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1031;AVGPOST=0.9985;RSQ=0.9945;ERATE=0.0003;THETA=0.0007;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 186653852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7709;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186653864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8949;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186653897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186653925 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9716;ERATE=0.0002;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186653949 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9666;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186653959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5294;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186654076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1751;AVGPOST=0.9987;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 186654116 . A AG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6567;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186654144 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8183;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186654148 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7872;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186654188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186654217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0143;AVGPOST=0.9988;RSQ=0.9628;ERATE=0.0003;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186654331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0139;AVGPOST=0.9984;RSQ=0.9454;ERATE=0.0004;THETA=0.0010;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186654360 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.1754;AVGPOST=0.9985;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 186654381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.1753;AVGPOST=0.9974;RSQ=0.9928;ERATE=0.0006;THETA=0.0007;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 186654410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0580;AVGPOST=0.9988;RSQ=0.9924;ERATE=0.0005;THETA=0.0004;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 186654544 . T TA 215 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7458;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186654633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.2389;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0003;THETA=0.0008;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 186654724 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5326;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186654788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0053;AVGPOST=0.9967;RSQ=0.7552;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186654830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.472;LDAF=0.0172;AVGPOST=0.9798;RSQ=0.5688;ERATE=0.0037;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186654850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.0661;AVGPOST=0.9964;RSQ=0.9826;ERATE=0.0003;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 186654980 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186655026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7329;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186655045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1035;AVGPOST=0.9991;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 186655055 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6522;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186655072 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4738;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186655203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186655243 . C CAATT 27781 PASS INDEL;BAVGPOST=0.981;BRSQ=0.945;LDAF=0.1678;AVGPOST=0.9882;RSQ=0.9683;ERATE=0.0016;THETA=0.0004;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 186655254 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.2361;AVGPOST=0.9970;RSQ=0.9941;ERATE=0.0006;THETA=0.0011;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 186655308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6168;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186655311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0564;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0004;THETA=0.0006;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 186655351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0002;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186655413 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186655437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8069;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186655509 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9444;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186655515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186655991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5368;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186656008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.925;LDAF=0.0365;AVGPOST=0.9940;RSQ=0.9377;ERATE=0.0003;THETA=0.0006;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 186656132 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5888;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186656152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2407;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0005;THETA=0.0008;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 186656301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0034;AVGPOST=0.9968;RSQ=0.6348;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186656419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8924;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186656422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0404;AVGPOST=0.9996;RSQ=0.9958;ERATE=0.0003;THETA=0.0006;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 186656475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5467;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186656502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1742;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0004;THETA=0.0007;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 186656659 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.906;LDAF=0.0165;AVGPOST=0.9963;RSQ=0.9175;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186656675 . A AG 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186656714 . G GT 804 PASS INDEL;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0157;AVGPOST=0.9979;RSQ=0.9400;ERATE=0.0005;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186656799 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1175;AVGPOST=0.9989;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 186656809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.1650;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186656916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9787;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186657002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7147;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186657271 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2399;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0003;THETA=0.0012;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 186657326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0128;AVGPOST=0.9979;RSQ=0.9421;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186657356 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0082;AVGPOST=0.9969;RSQ=0.8529;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186657408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.6273;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186657527 . TTTTC T 527 PASS INDEL;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9093;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186657543 . A AT 90 PASS INDEL;BAVGPOST=0.992;BRSQ=0.566;LDAF=0.0198;AVGPOST=0.9754;RSQ=0.4907;ERATE=0.0059;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186657545 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9535;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186657680 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1026;AVGPOST=0.9991;RSQ=0.9956;ERATE=0.0004;THETA=0.0012;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 186657732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0646;AVGPOST=0.9984;RSQ=0.9892;ERATE=0.0004;THETA=0.0005;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 186657733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0027;AVGPOST=0.9967;RSQ=0.5213;ERATE=0.0008;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186657765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0064;AVGPOST=0.9933;RSQ=0.5678;ERATE=0.0009;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186657876 . C CA 892 PASS INDEL;BAVGPOST=0.929;BRSQ=0.687;LDAF=0.1129;AVGPOST=0.9487;RSQ=0.8238;ERATE=0.0021;THETA=0.0005;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 186657920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9821;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186657994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1253;AVGPOST=0.9986;RSQ=0.9945;ERATE=0.0004;THETA=0.0007;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 186658072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.9571;AVGPOST=0.9963;RSQ=0.9605;ERATE=0.0003;THETA=0.0007;AC=2091;AN=2184 GT:DS:GL:BD 0.95741761 1
1 186658172 . TCTAA T 321 PASS INDEL;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0051;AVGPOST=0.9974;RSQ=0.7877;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186658198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0659;AVGPOST=0.9981;RSQ=0.9884;ERATE=0.0004;THETA=0.0005;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 186658212 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1888;AVGPOST=0.9984;RSQ=0.9957;ERATE=0.0002;THETA=0.0004;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 186658347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1011;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 186658395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9999;RSQ=0.9310;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186658448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.969;LDAF=0.1158;AVGPOST=0.9968;RSQ=0.9882;ERATE=0.0005;THETA=0.0005;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 186658524 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9765;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186658570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7379;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186658759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0509;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0003;THETA=0.0008;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 186658830 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1174;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 186658933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186659055 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186659072 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0082;AVGPOST=0.9981;RSQ=0.9390;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186659125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1892;AVGPOST=0.9986;RSQ=0.9963;ERATE=0.0005;THETA=0.0007;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 186659230 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.967;LDAF=0.0615;AVGPOST=0.9977;RSQ=0.9849;ERATE=0.0003;THETA=0.0050;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 186659231 rs113749646 C CA 23902 PASS INDEL;BAVGPOST=0.977;BRSQ=0.947;LDAF=0.2262;AVGPOST=0.9851;RSQ=0.9734;ERATE=0.0010;THETA=0.0006;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 186659234 . A AC 2673 PASS INDEL;BAVGPOST=0.959;BRSQ=0.897;LDAF=0.2102;AVGPOST=0.9721;RSQ=0.9478;ERATE=0.0009;THETA=0.0004;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 186659238 . A AC 177 PASS INDEL;BAVGPOST=0.994;BRSQ=0.763;LDAF=0.0132;AVGPOST=0.9918;RSQ=0.7595;ERATE=0.0009;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186659264 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5735;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186659347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6919;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186659423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9403;ERATE=0.0002;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186659431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6114;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186659444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4978;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186659466 . A AC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6802;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186659495 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7110;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186659566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186659614 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7290;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186659840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8941;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186659859 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1893;AVGPOST=0.9990;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 186660012 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5620;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186660200 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8889;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186660212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0407;AVGPOST=0.9987;RSQ=0.9874;ERATE=0.0002;THETA=0.0004;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 186660238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1031;AVGPOST=0.9984;RSQ=0.9926;ERATE=0.0003;THETA=0.0006;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 186660304 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.707;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7655;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186660333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.723;LDAF=0.0118;AVGPOST=0.9922;RSQ=0.7560;ERATE=0.0002;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186660337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1893;AVGPOST=0.9984;RSQ=0.9954;ERATE=0.0004;THETA=0.0007;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 186660411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.830;LDAF=0.1738;AVGPOST=0.9502;RSQ=0.8793;ERATE=0.0073;THETA=0.0009;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 186660443 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.752;LDAF=0.0042;AVGPOST=0.9971;RSQ=0.7246;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186660455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9499;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186660566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186660697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.8861;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186660748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9815;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186660819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.888;LDAF=0.0105;AVGPOST=0.9984;RSQ=0.9451;ERATE=0.0002;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186661094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8915;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186661146 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.705;LDAF=0.0045;AVGPOST=0.9987;RSQ=0.9148;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186661198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186661251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186661347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6283;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186661379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0631;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0028;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 186661413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186661495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9811;ERATE=0.0003;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186661507 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1900;AVGPOST=0.9980;RSQ=0.9947;ERATE=0.0006;THETA=0.0009;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 186661563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186661576 . T TA 225 PASS INDEL;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6156;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186661578 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8681;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186661609 . A AT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186661696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.7017;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186661698 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1027;AVGPOST=0.9986;RSQ=0.9939;ERATE=0.0004;THETA=0.0004;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 186661811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0648;AVGPOST=0.9991;RSQ=0.9938;ERATE=0.0005;THETA=0.0006;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 186661847 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5770;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186662117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0649;AVGPOST=0.9990;RSQ=0.9933;ERATE=0.0004;THETA=0.0011;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 186662271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.9081;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186662345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1175;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0006;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 186662387 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186662388 . CA C 186 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4635;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186662414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0034;AVGPOST=0.9961;RSQ=0.6209;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186662476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1176;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 186662679 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0040;AVGPOST=0.9996;RSQ=0.9681;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186662776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2403;AVGPOST=0.9967;RSQ=0.9942;ERATE=0.0007;THETA=0.0006;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 186662788 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9328;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186662796 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1246;AVGPOST=0.9927;RSQ=0.9731;ERATE=0.0005;THETA=0.0003;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 186662836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9796;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186662879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5509;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186662886 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5362;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186662975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186663023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0646;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0006;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 186663036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0646;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 186663151 . G GA 30 PASS INDEL;BAVGPOST=0.990;BRSQ=0.518;LDAF=0.0257;AVGPOST=0.9628;RSQ=0.4182;ERATE=0.0077;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186663244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9573;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186663255 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186663261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.975;LDAF=0.2277;AVGPOST=0.9885;RSQ=0.9805;ERATE=0.0004;THETA=0.0007;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 186663336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0654;AVGPOST=0.9981;RSQ=0.9875;ERATE=0.0003;THETA=0.0008;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 186663430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0658;AVGPOST=0.9986;RSQ=0.9906;ERATE=0.0006;THETA=0.0013;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 186663442 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0051;AVGPOST=0.9932;RSQ=0.4799;ERATE=0.0010;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186663458 . C CA 820 PASS INDEL;BAVGPOST=0.887;BRSQ=0.676;LDAF=0.1846;AVGPOST=0.9195;RSQ=0.8280;ERATE=0.0054;THETA=0.0007;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 186663534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6582;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186663641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186663696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1175;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 186663757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1176;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0003;THETA=0.0007;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 186663886 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6009;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186663917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0645;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0009;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 186663918 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0002;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186663936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0644;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 186663990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186664165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0509;AVGPOST=0.9996;RSQ=0.9967;ERATE=0.0003;THETA=0.0010;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 186664166 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186664193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9640;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186664260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8230;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186664308 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186664349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7094;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186664505 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1893;AVGPOST=0.9985;RSQ=0.9961;ERATE=0.0003;THETA=0.0006;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 186664508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0644;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0009;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 186664592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6257;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186664620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6600;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186664664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0142;AVGPOST=0.9973;RSQ=0.9200;ERATE=0.0005;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186664750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5851;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186664788 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0088;AVGPOST=0.9947;RSQ=0.8281;ERATE=0.0005;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186664816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1031;AVGPOST=0.9979;RSQ=0.9902;ERATE=0.0004;THETA=0.0011;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 186664823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0064;AVGPOST=0.9957;RSQ=0.7531;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186664880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.952;LDAF=0.0537;AVGPOST=0.9959;RSQ=0.9719;ERATE=0.0008;THETA=0.0006;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 186664886 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.935;LDAF=0.1278;AVGPOST=0.9692;RSQ=0.8960;ERATE=0.0025;THETA=0.0005;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 186664938 . TTC T 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9642;ERATE=0.0002;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186665078 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186665174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0866;AVGPOST=0.9986;RSQ=0.9935;ERATE=0.0004;THETA=0.0004;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 186665242 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186665284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8784;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186665431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0117;AVGPOST=0.9975;RSQ=0.9194;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186665445 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2117;AVGPOST=0.9972;RSQ=0.9933;ERATE=0.0007;THETA=0.0011;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 186665465 rs34202467 ATCTC A 10358 PASS INDEL;BAVGPOST=0.974;BRSQ=0.931;LDAF=0.2002;AVGPOST=0.9469;RSQ=0.8789;ERATE=0.0005;THETA=0.0005;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 186665480 . TCTC T 10697 PASS INDEL;BAVGPOST=0.974;BRSQ=0.931;LDAF=0.2018;AVGPOST=0.9477;RSQ=0.8818;ERATE=0.0005;THETA=0.0003;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 186665586 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8292;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186665734 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1172;AVGPOST=0.9986;RSQ=0.9953;ERATE=0.0004;THETA=0.0008;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 186665737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0942;AVGPOST=0.9988;RSQ=0.9947;ERATE=0.0003;THETA=0.0007;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 186665789 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9827;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186665945 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0861;AVGPOST=0.9992;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 186666077 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186666080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.8173;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186666089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4271;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186666131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186666191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1441;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0007;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 186666202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186666280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186666284 . C CA 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.5645;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186666370 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0320;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0002;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 186666394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186666471 . AC A 657 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0003;THETA=0.0052;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186666488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186666532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1447;AVGPOST=0.9979;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 186666560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5301;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186666624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2609;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0005;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 186666690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0129;AVGPOST=0.9990;RSQ=0.9712;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186666733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0198;AVGPOST=0.9986;RSQ=0.9716;ERATE=0.0002;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 186666771 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1435;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0006;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 186666798 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1023;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 186666850 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2610;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0007;THETA=0.0004;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 186666936 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186666950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.3145;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186666960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186667088 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9554;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186667126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1175;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0002;THETA=0.0006;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 186667151 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8526;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186667185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1175;AVGPOST=0.9984;RSQ=0.9942;ERATE=0.0004;THETA=0.0008;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 186667369 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186667444 rs112212195 A ACTGTGT 53426 PASS INDEL;BAVGPOST=0.973;BRSQ=0.932;LDAF=0.2070;AVGPOST=0.9877;RSQ=0.9766;ERATE=0.0013;THETA=0.0007;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 186667516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186667638 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2198;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 186667667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186667824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186667897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186667936 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8418;ERATE=0.0003;THETA=0.0021;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186667970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0122;AVGPOST=0.9975;RSQ=0.9226;ERATE=0.0003;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186668006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8821;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186668042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.6394;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186668129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5369;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186668143 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8939;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186668288 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4969;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186668398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.554;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8023;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186668402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0327;AVGPOST=0.9986;RSQ=0.9806;ERATE=0.0006;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 186668450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0499;AVGPOST=0.9970;RSQ=0.9743;ERATE=0.0006;THETA=0.0009;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 186668451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0092;AVGPOST=0.9965;RSQ=0.8214;ERATE=0.0006;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186668454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.330;LDAF=0.0090;AVGPOST=0.9865;RSQ=0.3781;ERATE=0.0012;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186668492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.611;LDAF=0.0034;AVGPOST=0.9973;RSQ=0.6442;ERATE=0.0008;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186668510 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0020;AVGPOST=0.9971;RSQ=0.3763;ERATE=0.0007;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186668539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0108;AVGPOST=0.9958;RSQ=0.8569;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186668631 rs11321275 AT A 19131 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1910;AVGPOST=0.9963;RSQ=0.9911;ERATE=0.0005;THETA=0.0017;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 186668702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8303;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186668974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.869;LDAF=0.0276;AVGPOST=0.9891;RSQ=0.8446;ERATE=0.0004;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 186669092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2621;AVGPOST=0.9973;RSQ=0.9951;ERATE=0.0005;THETA=0.0006;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 186669131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1078;AVGPOST=0.9909;RSQ=0.9607;ERATE=0.0005;THETA=0.0006;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 186669203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8847;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186669647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0462;AVGPOST=0.9989;RSQ=0.9883;ERATE=0.0004;THETA=0.0008;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 186669648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5007;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186669660 . TA T 3089 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0294;AVGPOST=0.9987;RSQ=0.9839;ERATE=0.0003;THETA=0.0014;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 186669682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186669696 . AT A 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9944;RSQ=0.5669;ERATE=0.0008;THETA=0.0022;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186669708 . T TA 100 PASS INDEL;BAVGPOST=0.994;BRSQ=0.421;LDAF=0.0229;AVGPOST=0.9677;RSQ=0.4356;ERATE=0.0056;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186669870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9690;ERATE=0.0003;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186669875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186669894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186669976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0320;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 186669978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0212;AVGPOST=0.9995;RSQ=0.9877;ERATE=0.0003;THETA=0.0011;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 186669991 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4024;ERATE=0.0006;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186670054 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186670078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4753;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186670194 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8225;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186670313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8246;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186670413 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0212;AVGPOST=0.9997;RSQ=0.9925;ERATE=0.0003;THETA=0.0012;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 186670475 . C CA 517 PASS INDEL;BAVGPOST=0.934;BRSQ=0.504;LDAF=0.1303;AVGPOST=0.8354;RSQ=0.4158;ERATE=0.0274;THETA=0.0007;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 186670595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.958;LDAF=0.0358;AVGPOST=0.9961;RSQ=0.9543;ERATE=0.0008;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 186670681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7268;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186670690 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.526;LDAF=0.0045;AVGPOST=0.9936;RSQ=0.4997;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186670850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8558;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186670874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6538;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186670875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5736;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186670944 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186670994 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0036;AVGPOST=0.9969;RSQ=0.6659;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186671051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0023;AVGPOST=0.9964;RSQ=0.3592;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186671239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.953;LDAF=0.0516;AVGPOST=0.9970;RSQ=0.9808;ERATE=0.0005;THETA=0.0007;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 186671271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7649;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186671272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0044;AVGPOST=0.9976;RSQ=0.7704;ERATE=0.0006;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186671402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186671518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186671543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7277;ERATE=0.0007;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186671544 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6535;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186671611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0508;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0011;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 186671913 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186671971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0027;AVGPOST=0.9985;RSQ=0.7695;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186672001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0510;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0002;THETA=0.0004;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 186672042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186672162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9377;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186672168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5423;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186672203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1048;AVGPOST=0.9970;RSQ=0.9886;ERATE=0.0003;THETA=0.0007;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 186672241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1544;AVGPOST=0.9979;RSQ=0.9936;ERATE=0.0004;THETA=0.0007;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 186672274 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6856;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186672374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9148;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186672623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.6074;ERATE=0.0013;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186672891 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.746;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8699;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186672945 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9825;ERATE=0.0003;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186673037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186673146 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186673305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6772;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186673314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7041;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186673369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186673423 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0289;AVGPOST=0.9997;RSQ=0.9960;ERATE=0.0002;THETA=0.0011;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 186673461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186673473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0212;AVGPOST=0.9994;RSQ=0.9869;ERATE=0.0003;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 186673573 . CCTTATTCAG C 542 PASS INDEL;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0040;AVGPOST=0.9970;RSQ=0.7111;ERATE=0.0004;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186673657 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0116;AVGPOST=0.9973;RSQ=0.9026;ERATE=0.0005;THETA=0.0016;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186673759 . AT A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6027;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186673775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186673781 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0371;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0002;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 186673875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3197;ERATE=0.0008;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186674044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8417;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186674136 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8398;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186674266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0002;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186674433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0508;AVGPOST=0.9996;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 186674561 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2263;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0002;THETA=0.0006;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 186674597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5545;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186674622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0117;AVGPOST=0.9993;RSQ=0.9743;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186674640 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0375;AVGPOST=0.9989;RSQ=0.9868;ERATE=0.0004;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 186674792 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9967;RSQ=0.9071;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186674825 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9089;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186674892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9832;ERATE=0.0002;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186674930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9811;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186674974 rs112330830 GT G 1581 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9979;RSQ=0.9410;ERATE=0.0004;THETA=0.0013;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186675120 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6387;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186675225 . G GT 2987 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0311;AVGPOST=0.9990;RSQ=0.9853;ERATE=0.0004;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 186675282 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1879;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0004;THETA=0.0006;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 186675506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0053;AVGPOST=0.9987;RSQ=0.9145;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186675510 rs10573412 TCA T 1399 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0147;AVGPOST=0.9978;RSQ=0.9404;ERATE=0.0004;THETA=0.0014;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186675515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0036;AVGPOST=0.9968;RSQ=0.6742;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186675527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.854;LDAF=0.0147;AVGPOST=0.9973;RSQ=0.9309;ERATE=0.0003;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186675647 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0049;AVGPOST=0.9986;RSQ=0.8893;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186675664 . TGTC T 4596 PASS INDEL;BAVGPOST=0.980;BRSQ=0.749;LDAF=0.0395;AVGPOST=0.9857;RSQ=0.8663;ERATE=0.0003;THETA=0.0021;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 186675682 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186675736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0390;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0003;THETA=0.0009;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 186675802 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.8023;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186675838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6883;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186675840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0321;AVGPOST=0.9997;RSQ=0.9960;ERATE=0.0003;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 186675891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186676151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0002;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186676253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0003;THETA=0.0012;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 186676354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0499;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 186676374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186676610 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9903;ERATE=0.0003;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186676612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5251;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186676714 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0320;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0002;THETA=0.0007;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 186676813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0049;AVGPOST=0.9989;RSQ=0.9141;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186676833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8830;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186676905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.976;LDAF=0.2069;AVGPOST=0.9840;RSQ=0.9668;ERATE=0.0045;THETA=0.0005;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 186676917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0058;AVGPOST=0.9990;RSQ=0.9252;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186677042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.942;LDAF=0.0412;AVGPOST=0.9937;RSQ=0.9358;ERATE=0.0006;THETA=0.0010;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 186677235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6626;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186677236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.615;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.5989;ERATE=0.0008;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186677253 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0140;AVGPOST=0.9992;RSQ=0.9757;ERATE=0.0003;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186677266 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4402;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186677273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0050;AVGPOST=0.9970;RSQ=0.7650;ERATE=0.0004;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186677328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8227;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186677337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9678;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186677387 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0325;AVGPOST=0.9987;RSQ=0.9819;ERATE=0.0005;THETA=0.0011;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 186677416 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5956;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186677451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0508;AVGPOST=0.9992;RSQ=0.9936;ERATE=0.0004;THETA=0.0006;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 186677628 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9073;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186677678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186677680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6106;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186677715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.5976;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186677799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5741;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186677920 . T TGAA 246 PASS INDEL;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6672;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186678053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.677;LDAF=0.0033;AVGPOST=0.9983;RSQ=0.7886;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186678134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186678138 . AG A 362 PASS INDEL;BAVGPOST=0.996;BRSQ=0.685;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7652;ERATE=0.0006;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186678174 . GA G 1772 PASS INDEL;BAVGPOST=0.992;BRSQ=0.938;LDAF=0.0550;AVGPOST=0.9947;RSQ=0.9632;ERATE=0.0005;THETA=0.0008;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 186678180 . T TG 105 PASS INDEL;BAVGPOST=0.998;BRSQ=0.677;LDAF=0.0033;AVGPOST=0.9971;RSQ=0.6379;ERATE=0.0007;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186678439 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.736;LDAF=0.0099;AVGPOST=0.9944;RSQ=0.7802;ERATE=0.0006;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186678452 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7222;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186678549 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.702;LDAF=0.0093;AVGPOST=0.9940;RSQ=0.7493;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186678556 rs71750049 C CT 1008 PASS INDEL;BAVGPOST=0.586;BRSQ=0.083;LDAF=0.7654;AVGPOST=0.7439;RSQ=0.4316;ERATE=0.0181;THETA=0.0009;AC=1811;AN=2184 GT:DS:GL:BD 0.82921243 1
1 186679025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0509;AVGPOST=0.9990;RSQ=0.9929;ERATE=0.0004;THETA=0.0011;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 186679148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5599;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186679273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9779;ERATE=0.0004;THETA=0.0016;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186679335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5448;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186679415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0175;AVGPOST=0.9988;RSQ=0.9677;ERATE=0.0005;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 186679438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.431;LDAF=0.0038;AVGPOST=0.9967;RSQ=0.6596;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186679520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.775;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7053;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186679532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8507;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186679597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7487;ERATE=0.0005;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186679601 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.481;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4786;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186679681 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0330;AVGPOST=0.9987;RSQ=0.9824;ERATE=0.0005;THETA=0.0013;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 186679985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0002;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186679986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7597;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186680198 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9364;ERATE=0.0003;THETA=0.0035;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186680220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7457;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186680258 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4744;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186680271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7394;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186680449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5194;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186680591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8366;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186680604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8803;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186680608 . AT A 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0029;AVGPOST=0.9971;RSQ=0.6004;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186680673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186680703 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5283;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186680715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.819;LDAF=0.0088;AVGPOST=0.9955;RSQ=0.7820;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186680757 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186680790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.800;LDAF=0.0086;AVGPOST=0.9961;RSQ=0.8026;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186680792 . G GT 87 PASS INDEL;BAVGPOST=0.986;BRSQ=0.518;LDAF=0.0295;AVGPOST=0.9616;RSQ=0.4829;ERATE=0.0072;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 186680855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4728;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186680895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186681155 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0002;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186681186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186681330 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6782;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186681470 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5580;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186681516 . TG T 16701 PASS INDEL;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.1076;AVGPOST=0.9971;RSQ=0.9887;ERATE=0.0003;THETA=0.0008;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 186681655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4259;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186681755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186681772 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186681806 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5120;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186681817 . AGAGT A 450 PASS INDEL;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6372;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186681864 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0535;AVGPOST=0.9991;RSQ=0.9936;ERATE=0.0003;THETA=0.0007;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 186681940 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7755;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186681988 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9548;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186681995 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6719;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186682033 rs112378735 C CT 38754 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2604;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 186682040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6684;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186682122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7476;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186682281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7236;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186682358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8525;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186682405 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4440;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186682432 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1086;AVGPOST=0.9987;RSQ=0.9940;ERATE=0.0006;THETA=0.0006;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 186682447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3491;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186682754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0534;AVGPOST=0.9991;RSQ=0.9935;ERATE=0.0003;THETA=0.0010;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 186682768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5923;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186682791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.1124;AVGPOST=0.9952;RSQ=0.9811;ERATE=0.0005;THETA=0.0009;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 186682875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2158;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0004;THETA=0.0011;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 186683061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186683298 . AG A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.5927;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186683326 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9046;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186683595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.8304;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186683740 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8324;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186683745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186683770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6861;ERATE=0.0007;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186683793 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5650;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186683800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.7239;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186683889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9583;ERATE=0.0002;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186683956 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186683972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0039;AVGPOST=0.9993;RSQ=0.9121;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186684172 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.703;LDAF=0.0081;AVGPOST=0.9914;RSQ=0.6103;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186684265 . GT G 279 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0041;AVGPOST=0.9965;RSQ=0.6760;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186684410 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5690;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186684442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8997;AVGPOST=0.9985;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=1966;AN=2184 GT:DS:GL:BD 0.90018314 1
1 186684464 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9721;ERATE=0.0003;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186684625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0002;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186684875 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1090;AVGPOST=0.9985;RSQ=0.9936;ERATE=0.0003;THETA=0.0013;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 186684977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9017;AVGPOST=0.9993;RSQ=0.9967;ERATE=0.0002;THETA=0.0006;AC=1970;AN=2184 GT:DS:GL:BD 0.90201467 1
1 186684983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6518;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186684994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7469;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186685095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0042;AVGPOST=0.9983;RSQ=0.8242;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186685149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186685154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8366;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186685290 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7386;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186685376 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7410;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186685471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5004;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186685498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7901;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186685604 . TCA T 177 PASS INDEL;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7175;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186685682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186685773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.9142;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186685818 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7912;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0003;THETA=0.0016;AC=1729;AN=2184 GT:DS:GL:BD 0.79166669 1
1 186685835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8496;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186685940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186685981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186686005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186686223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186686301 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5994;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186686327 . CGT C 331 PASS INDEL;BAVGPOST=0.978;BRSQ=0.673;LDAF=0.0617;AVGPOST=0.9382;RSQ=0.5664;ERATE=0.0209;THETA=0.0011;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 186686328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0383;AVGPOST=0.9988;RSQ=0.9884;ERATE=0.0002;THETA=0.0009;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 186686491 . ACT A 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186686976 . T TA 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.563;LDAF=0.0029;AVGPOST=0.9955;RSQ=0.4153;ERATE=0.0005;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186687032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7251;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186687159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8193;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186687347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9526;AVGPOST=0.9992;RSQ=0.9921;ERATE=0.0004;THETA=0.0005;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 186687388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0031;AVGPOST=0.9971;RSQ=0.6427;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186687540 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186687738 . AT A 1248 PASS INDEL;BAVGPOST=0.991;BRSQ=0.830;LDAF=0.0276;AVGPOST=0.9823;RSQ=0.7527;ERATE=0.0010;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 186687744 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9835;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186687791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8255;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186687846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6495;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186687917 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.754;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5615;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186687999 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186688130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6242;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186688178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6429;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186688234 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9267;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186688238 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186688342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0387;AVGPOST=0.9994;RSQ=0.9938;ERATE=0.0003;THETA=0.0008;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 186688418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4570;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186688539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9951;ERATE=0.0003;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186688563 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186688853 . T TA 505 PASS INDEL;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0078;AVGPOST=0.9935;RSQ=0.6878;ERATE=0.0005;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186688880 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9855;ERATE=0.0002;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186688924 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186688980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186689079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5531;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186689362 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6304;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186689542 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5412;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186689576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9825;ERATE=0.0002;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186689636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0527;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0013;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 186689673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7637;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186689696 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0140;AVGPOST=0.9995;RSQ=0.9819;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186689708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6527;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186689848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9842;ERATE=0.0002;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186689972 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0002;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186690075 . A AG 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.6164;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186690107 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6982;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186690118 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186690142 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186690435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.9132;AVGPOST=0.9985;RSQ=0.9926;ERATE=0.0004;THETA=0.0009;AC=1996;AN=2184 GT:DS:GL:BD 0.91391939 1
1 186690466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5525;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186690575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9025;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186690600 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4924;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186690963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6923;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186691014 . CTT C 212 PASS INDEL;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6021;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186691035 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5649;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186691056 . G GT 102 PASS INDEL;BAVGPOST=0.989;BRSQ=0.512;LDAF=0.0226;AVGPOST=0.9693;RSQ=0.4621;ERATE=0.0066;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186691238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=1.000;LDAF=0.7522;AVGPOST=0.9972;RSQ=0.9941;ERATE=0.0005;THETA=0.0004;AC=1644;AN=2184 GT:DS:GL:BD 0.75274724 1
1 186691288 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1083;AVGPOST=0.9982;RSQ=0.9923;ERATE=0.0003;THETA=0.0007;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 186691360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8899;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186691367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4872;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186691448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0128;AVGPOST=0.9996;RSQ=0.9877;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186691482 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0048;AVGPOST=0.9981;RSQ=0.8625;ERATE=0.0006;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186691584 . C CA 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186691730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186691820 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.563;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6609;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186691838 . G GGAAT 383 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0044;AVGPOST=0.9967;RSQ=0.7356;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186691935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9324;ERATE=0.0002;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186691943 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186692030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5298;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186692048 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8956;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186692116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4576;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186692124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0879;AVGPOST=0.9914;RSQ=0.9588;ERATE=0.0004;THETA=0.0004;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 186692353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0108;AVGPOST=0.9989;RSQ=0.9610;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186692469 . GAC G 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3465;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186692503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186692562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9650;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0002;THETA=0.0006;AC=2109;AN=2184 GT:DS:GL:BD 0.96565932 1
1 186692611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0037;AVGPOST=0.9977;RSQ=0.7513;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186692624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186692670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7996;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186692733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.965;LDAF=0.8941;AVGPOST=0.9901;RSQ=0.9637;ERATE=0.0014;THETA=0.0010;AC=1957;AN=2184 GT:DS:GL:BD 0.89606225 1
1 186692739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.947;LDAF=0.9624;AVGPOST=0.9962;RSQ=0.9579;ERATE=0.0005;THETA=0.0005;AC=2106;AN=2184 GT:DS:GL:BD 0.96428573 1
1 186692978 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186692983 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0220;AVGPOST=0.9996;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 186693068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.939;LDAF=0.1048;AVGPOST=0.9939;RSQ=0.9763;ERATE=0.0003;THETA=0.0011;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 186693069 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186693087 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0003;THETA=0.0033;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186693146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9998;RSQ=0.9820;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186693188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186693220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8493;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186693225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7961;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186693228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1092;AVGPOST=0.9974;RSQ=0.9886;ERATE=0.0006;THETA=0.0006;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 186693383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8552;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186693412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7531;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186693439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186693515 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186693552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8758;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186693553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7111;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186693615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8366;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186693619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.996;LDAF=0.7511;AVGPOST=0.9972;RSQ=0.9944;ERATE=0.0004;THETA=0.0007;AC=1643;AN=2184 GT:DS:GL:BD 0.75228935 1
1 186693626 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8006;ERATE=0.0004;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186693627 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1083;AVGPOST=0.9986;RSQ=0.9938;ERATE=0.0003;THETA=0.0009;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 186693632 . CTT C 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186693672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.846;LDAF=0.7266;AVGPOST=0.8889;RSQ=0.7927;ERATE=0.0151;THETA=0.0007;AC=1649;AN=2184 GT:DS:GL:BD 0.75503665 1
1 186693678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5768;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186693779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.936;LDAF=0.7533;AVGPOST=0.9410;RSQ=0.8879;ERATE=0.0118;THETA=0.0007;AC=1674;AN=2184 GT:DS:GL:BD 0.76648355 1
1 186693787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8019;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186693793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.805;LDAF=0.0154;AVGPOST=0.9938;RSQ=0.8512;ERATE=0.0004;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186693814 . C CT 792 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0071;AVGPOST=0.9985;RSQ=0.8924;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186693921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7109;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186693941 . T TA 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4384;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186694040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7973;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186694090 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186694227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.920;LDAF=0.1036;AVGPOST=0.9928;RSQ=0.9701;ERATE=0.0005;THETA=0.0012;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 186694434 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6520;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186694454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0398;AVGPOST=0.9980;RSQ=0.9804;ERATE=0.0004;THETA=0.0007;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 186694489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1082;AVGPOST=0.9988;RSQ=0.9948;ERATE=0.0003;THETA=0.0007;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 186694522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5903;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186694579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0438;AVGPOST=0.9977;RSQ=0.9786;ERATE=0.0003;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 186694669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1100;AVGPOST=0.9931;RSQ=0.9693;ERATE=0.0005;THETA=0.0003;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 186694827 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.852;LDAF=0.9282;AVGPOST=0.9637;RSQ=0.7933;ERATE=0.0086;THETA=0.0004;AC=2053;AN=2184 GT:DS:GL:BD 0.94001830 1
1 186695029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186695149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186695186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9117;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186695209 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0444;AVGPOST=0.9974;RSQ=0.9768;ERATE=0.0005;THETA=0.0007;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 186695232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8291;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186695344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7603;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186695385 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186695391 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5040;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186695446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0042;AVGPOST=0.9978;RSQ=0.7934;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186695500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186695547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6836;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186695596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0393;AVGPOST=0.9993;RSQ=0.9923;ERATE=0.0002;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 186695698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186695780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5233;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186695919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0302;AVGPOST=0.9991;RSQ=0.9866;ERATE=0.0003;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 186695929 . ATC A 1074 PASS INDEL;BAVGPOST=0.980;BRSQ=0.904;LDAF=0.0988;AVGPOST=0.9867;RSQ=0.9450;ERATE=0.0006;THETA=0.0006;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 186695930 . TCTC T 13965 PASS INDEL;BAVGPOST=0.983;BRSQ=0.917;LDAF=0.1023;AVGPOST=0.9917;RSQ=0.9668;ERATE=0.0003;THETA=0.0007;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 186695945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5287;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186696058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7972;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186696068 . TTGTGA T 295 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7378;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186696103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4943;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186696119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0018;AVGPOST=0.9970;RSQ=0.3014;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186696182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0;LDAF=0.9942;AVGPOST=0.9940;RSQ=0.5895;ERATE=0.0009;THETA=0.0010;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 186696197 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186696259 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8316;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186696333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1085;AVGPOST=0.9978;RSQ=0.9911;ERATE=0.0003;THETA=0.0009;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 186696376 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.562;LDAF=0.0042;AVGPOST=0.9964;RSQ=0.6565;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186696669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186696824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0008;AVGPOST=0.9987;RSQ=0.4518;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186696843 rs113070329 A ATTT 610 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7548;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186696855 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9690;AVGPOST=0.9993;RSQ=0.9899;ERATE=0.0004;THETA=0.0008;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 186696923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3609;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186696932 rs56138770 CTT C 37832 PASS INDEL;BAVGPOST=0.977;BRSQ=0.956;LDAF=0.7046;AVGPOST=0.9499;RSQ=0.9180;ERATE=0.0059;THETA=0.0004;AC=1571;AN=2184 GT:DS:GL:BD 0.71932232 1
1 186696984 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.8076;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186697086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.958;LDAF=0.0430;AVGPOST=0.9962;RSQ=0.9655;ERATE=0.0004;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 186697131 . CTG C 11 PASS INDEL;BAVGPOST=0.996;BRSQ=0.618;LDAF=0.0099;AVGPOST=0.9888;RSQ=0.5507;ERATE=0.0033;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186697196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186697207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6002;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186697208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186697210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186697359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186697575 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5599;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186697754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186697805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7851;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186697812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.673;LDAF=0.0032;AVGPOST=0.9975;RSQ=0.6636;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186697845 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9872;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186697848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0465;AVGPOST=0.9947;RSQ=0.9548;ERATE=0.0011;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 186697922 . AG A 248 PASS INDEL;BAVGPOST=0.997;BRSQ=0.713;LDAF=0.0062;AVGPOST=0.9971;RSQ=0.7910;ERATE=0.0007;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186698052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7767;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186698083 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5037;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186698103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0040;AVGPOST=0.9963;RSQ=0.6171;ERATE=0.0020;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186698166 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0396;AVGPOST=0.9988;RSQ=0.9864;ERATE=0.0003;THETA=0.0007;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 186698224 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.9020;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0002;THETA=0.0002;AC=1971;AN=2184 GT:DS:GL:BD 0.90247256 1
1 186698254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.9021;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=1971;AN=2184 GT:DS:GL:BD 0.90247256 1
1 186698313 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7219;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186698373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9173;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186698377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9841;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186698385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8329;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186698400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.897;LDAF=0.0215;AVGPOST=0.9953;RSQ=0.9194;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 186698507 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0002;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186698522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0145;AVGPOST=0.9983;RSQ=0.9509;ERATE=0.0007;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186698696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186698707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7846;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186698737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7911;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=1729;AN=2184 GT:DS:GL:BD 0.79166669 1
1 186698751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8316;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186698764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1040;AVGPOST=0.9967;RSQ=0.9847;ERATE=0.0003;THETA=0.0007;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 186698774 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186698783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.980;LDAF=0.1782;AVGPOST=0.9897;RSQ=0.9719;ERATE=0.0004;THETA=0.0007;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 186698784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1092;AVGPOST=0.9983;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 186698841 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5709;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186698881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9431;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186698995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186699053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0439;AVGPOST=0.9979;RSQ=0.9833;ERATE=0.0003;THETA=0.0007;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 186699063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5200;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186699136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0901;AVGPOST=0.9891;RSQ=0.9503;ERATE=0.0004;THETA=0.0005;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 186699324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0052;AVGPOST=0.9975;RSQ=0.7906;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186699336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.776;LDAF=0.0094;AVGPOST=0.9932;RSQ=0.7299;ERATE=0.0007;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186699376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0106;AVGPOST=0.9982;RSQ=0.9302;ERATE=0.0003;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186699416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8945;AVGPOST=0.9868;RSQ=0.9533;ERATE=0.0015;THETA=0.0006;AC=1958;AN=2184 GT:DS:GL:BD 0.89652014 1
1 186699480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.711;LDAF=0.0268;AVGPOST=0.9919;RSQ=0.8815;ERATE=0.0003;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 186699491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1089;AVGPOST=0.9988;RSQ=0.9943;ERATE=0.0005;THETA=0.0038;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 186699500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6866;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186699527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.750;LDAF=0.0047;AVGPOST=0.9976;RSQ=0.7856;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186699556 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186699671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1086;AVGPOST=0.9988;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 186699732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0136;AVGPOST=0.9989;RSQ=0.9624;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186699795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9767;ERATE=0.0003;THETA=0.0025;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186699905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8546;ERATE=0.0006;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186699906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1090;AVGPOST=0.9978;RSQ=0.9898;ERATE=0.0006;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 186700047 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186700061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186700077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8091;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186700148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9536;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186700227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7324;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186700287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9529;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186700410 rs33954059 A AT 75501 PASS INDEL;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.8975;AVGPOST=0.9915;RSQ=0.9688;ERATE=0.0019;THETA=0.0004;AC=1964;AN=2184 GT:DS:GL:BD 0.89926738 1
1 186700495 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0141;AVGPOST=0.9993;RSQ=0.9758;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186700527 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5736;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186700699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7865;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186700824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7836;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186700896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5754;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186700907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6776;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186700959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9687;AVGPOST=0.9986;RSQ=0.9848;ERATE=0.0004;THETA=0.0003;AC=2117;AN=2184 GT:DS:GL:BD 0.96932232 1
1 186701015 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0108;AVGPOST=0.9981;RSQ=0.9324;ERATE=0.0004;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186701037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9605;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186701067 . GA G 1380 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0157;AVGPOST=0.9984;RSQ=0.9584;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186701124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9020;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0007;AC=1971;AN=2184 GT:DS:GL:BD 0.90247256 1
1 186701148 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186701164 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=0.9998;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186701291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5671;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186701370 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.893;LDAF=0.0101;AVGPOST=0.9990;RSQ=0.9497;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186701441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7760;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186701490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7577;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186701500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186701537 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5726;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186701568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8230;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186701596 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.8095;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186701607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186701786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5663;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186701891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.890;LDAF=0.0123;AVGPOST=0.9961;RSQ=0.8913;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186701974 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8967;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186702020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6813;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186702051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186702204 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186702370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5657;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186702376 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5736;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186702397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186702459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6397;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186702599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9691;AVGPOST=0.9991;RSQ=0.9874;ERATE=0.0004;THETA=0.0003;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 186702712 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0062;AVGPOST=0.9986;RSQ=0.9162;ERATE=0.0004;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186702783 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9462;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186702823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0002;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186702838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9267;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186702921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186703017 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186703227 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4959;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186703235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5242;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186703257 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.967;LDAF=0.0383;AVGPOST=0.9964;RSQ=0.9609;ERATE=0.0006;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 186703281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6413;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186703375 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186703379 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186703455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9225;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186703480 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7956;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186703504 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186703519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5855;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186703635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7524;AVGPOST=0.9980;RSQ=0.9962;ERATE=0.0003;THETA=0.0009;AC=1644;AN=2184 GT:DS:GL:BD 0.75274724 1
1 186703681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0049;AVGPOST=0.9982;RSQ=0.8556;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186703801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186703851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9482;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186703887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186704049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186704052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186704124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8668;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186704141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9768;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186704364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186704439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8590;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186704471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0052;AVGPOST=0.9968;RSQ=0.7707;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186704538 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.902;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.7500;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186704555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9298;AVGPOST=0.9973;RSQ=0.9859;ERATE=0.0004;THETA=0.0017;AC=2031;AN=2184 GT:DS:GL:BD 0.92994505 1
1 186704645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4912;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186704706 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186704714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0002;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186704723 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6271;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186704927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0172;AVGPOST=0.9990;RSQ=0.9780;ERATE=0.0003;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 186704929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8410;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186704999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8221;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186705048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5803;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186705268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6052;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186705276 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186705353 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186705362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186705372 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9298;AVGPOST=0.9992;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=2031;AN=2184 GT:DS:GL:BD 0.92994505 1
1 186705404 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.8475;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=1851;AN=2184 GT:DS:GL:BD 0.84752744 1
1 186705414 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0106;AVGPOST=0.9993;RSQ=0.9710;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186705586 . TG T 12697 PASS INDEL;BAVGPOST=0.982;BRSQ=0.967;LDAF=0.3268;AVGPOST=0.9412;RSQ=0.9049;ERATE=0.0027;THETA=0.0036;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 186705594 . TA T 29620 PASS INDEL;BAVGPOST=0.940;BRSQ=0.820;LDAF=0.8256;AVGPOST=0.9232;RSQ=0.8213;ERATE=0.0066;THETA=0.0005;AC=1822;AN=2184 GT:DS:GL:BD 0.83424908 1
1 186705882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0134;AVGPOST=0.9995;RSQ=0.9803;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186706095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0140;AVGPOST=0.9993;RSQ=0.9760;ERATE=0.0003;THETA=0.0013;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186706200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186706206 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7375;ERATE=0.0002;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186706231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5137;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186706333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186706399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186706442 . T TA 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.520;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4156;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186706537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186706674 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8617;ERATE=0.0002;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186706709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7634;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186706715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7539;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186706802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5367;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186707019 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.700;LDAF=0.0072;AVGPOST=0.9917;RSQ=0.5778;ERATE=0.0017;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186707376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9352;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186707435 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186707469 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186707485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6555;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186707778 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6043;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186707868 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.9032;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186707884 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7452;AVGPOST=0.9969;RSQ=0.9945;ERATE=0.0004;THETA=0.0005;AC=1628;AN=2184 GT:DS:GL:BD 0.74542123 1
1 186708023 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8617;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186708067 . ACTT A 192 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186708125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7160;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186708168 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=1.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0002;THETA=0.0008;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 186708184 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9278;AVGPOST=0.9994;RSQ=0.9962;ERATE=0.0002;THETA=0.0006;AC=2026;AN=2184 GT:DS:GL:BD 0.92765570 1
1 186708260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186708462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4959;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186708551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8682;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186708566 . GA G 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3899;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186708572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0065;AVGPOST=0.9969;RSQ=0.8234;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186708577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7263;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186708609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5394;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186708728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9883;ERATE=0.0002;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186708729 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8508;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186708842 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186708903 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1015;AVGPOST=0.9986;RSQ=0.9931;ERATE=0.0004;THETA=0.0008;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 186709122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9452;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186709279 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186709348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186709361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8561;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186709390 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0346;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0002;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 186709400 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5229;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186709490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8812;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186709542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7976;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186709582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186709921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6730;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186709931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0121;AVGPOST=0.9988;RSQ=0.9677;ERATE=0.0004;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186709942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186710102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186710157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9846;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186710204 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6933;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186710304 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9456;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186710304 . CT C 1248 PASS INDEL;BAVGPOST=0.997;BRSQ=0.902;LDAF=0.0207;AVGPOST=0.9928;RSQ=0.8715;ERATE=0.0004;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 186710309 . GAA G 1827 PASS INDEL;BAVGPOST=0.997;BRSQ=0.902;LDAF=0.0206;AVGPOST=0.9930;RSQ=0.8756;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 186710333 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1118;AVGPOST=0.9984;RSQ=0.9933;ERATE=0.0005;THETA=0.0006;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 186710366 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186710441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8751;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186710614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9908;ERATE=0.0002;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186710861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6981;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186710897 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8825;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186711025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186711040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.865;LDAF=0.0059;AVGPOST=0.9985;RSQ=0.9119;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186711363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.726;LDAF=0.0064;AVGPOST=0.9971;RSQ=0.8105;ERATE=0.0006;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186711378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4536;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186711457 . GA G 158 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9109;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186711561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1016;AVGPOST=0.9991;RSQ=0.9957;ERATE=0.0004;THETA=0.0020;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 186711612 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0304;AVGPOST=0.9984;RSQ=0.9805;ERATE=0.0004;THETA=0.0009;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 186711625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9451;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186711683 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7096;ERATE=0.0005;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186711684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.710;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7651;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186711702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186711705 . TAAC T 100 PASS INDEL;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8020;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186711883 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6015;ERATE=0.0005;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186711910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7836;AVGPOST=0.9962;RSQ=0.9904;ERATE=0.0004;THETA=0.0005;AC=1713;AN=2184 GT:DS:GL:BD 0.78434068 1
1 186711912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8735;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186711928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1021;AVGPOST=0.9978;RSQ=0.9908;ERATE=0.0003;THETA=0.0003;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 186712020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186712022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7258;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186712121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0123;AVGPOST=0.9992;RSQ=0.9701;ERATE=0.0003;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186712122 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0123;AVGPOST=0.9993;RSQ=0.9754;ERATE=0.0002;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186712165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186712187 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186712194 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0004;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186712393 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6673;AVGPOST=0.9964;RSQ=0.9938;ERATE=0.0003;THETA=0.0006;AC=1458;AN=2184 GT:DS:GL:BD 0.66758239 1
1 186712408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186712436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7038;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186712455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6228;AVGPOST=0.9949;RSQ=0.9920;ERATE=0.0004;THETA=0.0006;AC=1362;AN=2184 GT:DS:GL:BD 0.62362635 1
1 186712704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7264;AVGPOST=0.9957;RSQ=0.9912;ERATE=0.0004;THETA=0.0008;AC=1588;AN=2184 GT:DS:GL:BD 0.72710621 1
1 186712748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8321;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186712811 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9632;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186712815 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8173;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186712848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186712901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186712912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0126;AVGPOST=0.9991;RSQ=0.9712;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186712956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0050;AVGPOST=0.9959;RSQ=0.6593;ERATE=0.0005;THETA=0.0030;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186712974 . C CA 2148 PASS INDEL;BAVGPOST=0.518;BRSQ=0.155;LDAF=0.5785;AVGPOST=0.6234;RSQ=0.2895;ERATE=0.0513;THETA=0.0007;AC=1320;AN=2184 GT:DS:GL:BD 0.60439563 1
1 186713000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.825;LDAF=0.0215;AVGPOST=0.9932;RSQ=0.8704;ERATE=0.0003;THETA=0.0018;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 186713094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.876;LDAF=0.0072;AVGPOST=0.9984;RSQ=0.9105;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186713221 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7969;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186713463 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6121;ERATE=0.0004;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186713467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0102;AVGPOST=0.9979;RSQ=0.9205;ERATE=0.0003;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186713471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5320;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186713527 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0059;AVGPOST=0.9951;RSQ=0.7592;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186713561 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5678;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186713613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8674;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186713619 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186713732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9699;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186713748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186713825 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.5141;ERATE=0.0002;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186713943 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5594;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186713985 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5873;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186714001 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186714060 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0575;AVGPOST=0.9988;RSQ=0.9926;ERATE=0.0003;THETA=0.0010;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 186714109 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0034;AVGPOST=0.9966;RSQ=0.6572;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186714222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0031;AVGPOST=0.9968;RSQ=0.6147;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186714373 . CA C 466 PASS INDEL;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186714401 . AGAG A 106 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7540;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186714415 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6434;ERATE=0.0008;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186714439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0071;AVGPOST=0.9985;RSQ=0.9202;ERATE=0.0003;THETA=0.0034;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186714454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7768;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186714511 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9149;ERATE=0.0002;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186714550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5767;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186714751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186714757 . CTG C 262 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5558;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186714788 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186714847 . A AT 173 PASS INDEL;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0055;AVGPOST=0.9957;RSQ=0.6647;ERATE=0.0006;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186714889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7726;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186714984 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9736;ERATE=0.0002;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186715157 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186715281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.6022;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186715318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186715383 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6868;ERATE=0.0002;THETA=0.0064;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186715394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0064;AVGPOST=0.9982;RSQ=0.8902;ERATE=0.0004;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186715460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9996;RSQ=0.9842;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186715604 . A ACTT 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3745;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186715622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7045;ERATE=0.0006;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186715642 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0121;AVGPOST=0.9995;RSQ=0.9798;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186715682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186715720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9387;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186715722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3789;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186715726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.6106;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186715843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9996;RSQ=0.9779;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186715856 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5198;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186715899 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8303;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186715922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7022;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186715955 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0084;AVGPOST=0.9971;RSQ=0.8657;ERATE=0.0004;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186716025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.8883;ERATE=0.0003;THETA=0.0030;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186716110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186716263 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6269;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186716329 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.777;LDAF=0.0076;AVGPOST=0.9951;RSQ=0.7712;ERATE=0.0003;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186716353 . GC G 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5931;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186716450 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9725;AVGPOST=0.9991;RSQ=0.9871;ERATE=0.0003;THETA=0.0007;AC=2124;AN=2184 GT:DS:GL:BD 0.97252744 1
1 186716561 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9722;AVGPOST=0.9992;RSQ=0.9869;ERATE=0.0004;THETA=0.0015;AC=2124;AN=2184 GT:DS:GL:BD 0.97252744 1
1 186716645 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0045;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186716654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186716766 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6307;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186716868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0063;AVGPOST=0.9982;RSQ=0.8802;ERATE=0.0005;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186716915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6903;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186716943 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0135;AVGPOST=0.9986;RSQ=0.9603;ERATE=0.0002;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186716977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9810;ERATE=0.0003;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186717128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0037;AVGPOST=0.9968;RSQ=0.6943;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186717129 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186717154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186717156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1254;AVGPOST=0.9938;RSQ=0.9782;ERATE=0.0006;THETA=0.0009;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 186717198 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186717216 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5678;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186717217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0060;AVGPOST=0.9982;RSQ=0.8740;ERATE=0.0005;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186717337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9975;RSQ=0.8259;ERATE=0.0002;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186717338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186717374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186717399 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.9396;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0011;AC=2052;AN=2184 GT:DS:GL:BD 0.93956041 1
1 186717505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9270;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186717554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7289;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186717572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.835;LDAF=0.8801;AVGPOST=0.9461;RSQ=0.8072;ERATE=0.0264;THETA=0.0010;AC=1955;AN=2184 GT:DS:GL:BD 0.89514655 1
1 186717613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6418;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186717687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0158;AVGPOST=0.9995;RSQ=0.9892;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186717715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186717764 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0033;AVGPOST=0.9981;RSQ=0.7644;ERATE=0.0004;THETA=0.0036;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186717831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8262;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186717945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186718006 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7960;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186718031 . TGAA T 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5929;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186718261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2077;AVGPOST=0.9848;RSQ=0.9657;ERATE=0.0005;THETA=0.0005;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 186718269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9232;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186718290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7106;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186718291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186718317 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9393;AVGPOST=0.9991;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=2052;AN=2184 GT:DS:GL:BD 0.93956041 1
1 186718334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9536;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186718345 . GT G 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5037;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186718488 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0005;AVGPOST=0.9989;RSQ=0.2646;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186718510 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7872;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186718511 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.9111;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186718532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9567;AVGPOST=0.9990;RSQ=0.9901;ERATE=0.0003;THETA=0.0006;AC=2090;AN=2184 GT:DS:GL:BD 0.95695972 1
1 186718596 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5771;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186718623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186718655 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8819;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186718693 . CTTTA C 1084 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9137;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186718840 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186718853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8531;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186718896 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0110;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186718959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5696;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186718963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5175;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186719092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5287;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186719106 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4871;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186719124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7697;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186719146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186719272 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186719281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9997;RSQ=0.9820;ERATE=0.0002;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186719293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5775;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186719368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7184;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186719513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186719568 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0086;AVGPOST=0.9985;RSQ=0.9303;ERATE=0.0002;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186719570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.0958;AVGPOST=0.9954;RSQ=0.9777;ERATE=0.0003;THETA=0.0008;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 186719632 . AG A 312 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8623;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186719646 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186719691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0002;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186719718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8830;ERATE=0.0006;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186719810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7349;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186719905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0072;AVGPOST=0.9966;RSQ=0.8153;ERATE=0.0006;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186719932 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7382;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186720003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6585;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186720055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5062;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186720057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8597;AVGPOST=0.9942;RSQ=0.9854;ERATE=0.0006;THETA=0.0010;AC=1879;AN=2184 GT:DS:GL:BD 0.86034799 1
1 186720069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186720084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8024;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186720119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8020;ERATE=0.0008;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186720186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8512;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186720339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.886;LDAF=0.0381;AVGPOST=0.9886;RSQ=0.8821;ERATE=0.0004;THETA=0.0011;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 186720386 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7651;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186720504 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9213;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186720528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0133;AVGPOST=0.9988;RSQ=0.9708;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186720545 . AT A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5972;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186720713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0061;AVGPOST=0.9986;RSQ=0.9087;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186720799 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186720881 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5759;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186720900 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6716;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186720937 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.6484;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186720983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8870;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186721179 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0122;AVGPOST=0.9986;RSQ=0.9545;ERATE=0.0002;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186721180 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0122;AVGPOST=0.9986;RSQ=0.9545;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186721220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.653;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8956;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186721223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6896;ERATE=0.0002;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186721231 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186721312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9366;ERATE=0.0003;THETA=0.0019;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186721384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9699;ERATE=0.0002;THETA=0.0016;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186721675 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6283;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186721746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0051;AVGPOST=0.9948;RSQ=0.6441;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186721747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9536;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0002;THETA=0.0005;AC=2083;AN=2184 GT:DS:GL:BD 0.95375460 1
1 186721977 . AC A 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186722019 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0036;AVGPOST=0.9976;RSQ=0.7380;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186722074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6249;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186722113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9545;AVGPOST=0.9995;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 186722138 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9397;AVGPOST=0.9989;RSQ=0.9934;ERATE=0.0003;THETA=0.0010;AC=2053;AN=2184 GT:DS:GL:BD 0.94001830 1
1 186722237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.9039;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186722248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186722322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186722331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4679;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186722414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9922;ERATE=0.0003;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186722418 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5975;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186722430 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9537;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=2083;AN=2184 GT:DS:GL:BD 0.95375460 1
1 186722436 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.947;LDAF=0.0185;AVGPOST=0.9975;RSQ=0.9470;ERATE=0.0003;THETA=0.0011;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 186722447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7044;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186722607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0002;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186722614 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186722673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186722689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186722723 . CT C 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6993;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186722755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186722768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5494;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186722804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8645;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186722864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8498;ERATE=0.0002;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186722920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186722959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8731;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186723007 . A AC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5163;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186723092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186723097 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186723115 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186723119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6640;ERATE=0.0002;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186723157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0002;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186723158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186723189 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186723240 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9995;RSQ=0.9805;ERATE=0.0002;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186723251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9557;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186723458 . TAG T 232 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8268;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186723572 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186723744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186723917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8666;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186724028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7891;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186724055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9206;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186724155 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9998;RSQ=0.9907;ERATE=0.0002;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186724161 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186724249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9547;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0002;THETA=0.0006;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 186724251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186724316 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186724510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0028;AVGPOST=0.9975;RSQ=0.6758;ERATE=0.0007;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186724538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9538;AVGPOST=0.9989;RSQ=0.9901;ERATE=0.0003;THETA=0.0008;AC=2083;AN=2184 GT:DS:GL:BD 0.95375460 1
1 186724638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9375;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186724694 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6874;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186724732 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186724746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6392;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186724799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186724834 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9504;ERATE=0.0003;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186724950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8499;ERATE=0.0002;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186725003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9560;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0003;THETA=0.0007;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 186725088 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8211;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186725115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186725336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.742;LDAF=0.0056;AVGPOST=0.9943;RSQ=0.5918;ERATE=0.0030;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186725340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6772;ERATE=0.0002;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186725363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0070;AVGPOST=0.9967;RSQ=0.8398;ERATE=0.0007;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186725364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186725365 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.919;LDAF=0.0192;AVGPOST=0.9961;RSQ=0.9207;ERATE=0.0004;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 186725417 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186725445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8832;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186725451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8985;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186725567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.8109;ERATE=0.0002;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186725602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8806;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186725659 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186725850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186726006 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186726141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186726234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.897;LDAF=0.0151;AVGPOST=0.9953;RSQ=0.8899;ERATE=0.0005;THETA=0.0012;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186726468 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9432;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186726478 . C CA 744 PASS INDEL;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0049;AVGPOST=0.9983;RSQ=0.8654;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186726501 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0119;AVGPOST=0.9967;RSQ=0.8963;ERATE=0.0003;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186726515 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0115;AVGPOST=0.9986;RSQ=0.9519;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186726598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4948;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186726765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9174;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186726791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4912;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186726794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0118;AVGPOST=0.9995;RSQ=0.9788;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186726884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186726972 rs11312899 TA T 74058 PASS INDEL;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.9573;AVGPOST=0.9982;RSQ=0.9815;ERATE=0.0005;THETA=0.0011;AC=2092;AN=2184 GT:DS:GL:BD 0.95787543 1
1 186726979 . AT A 568 PASS INDEL;BAVGPOST=0.751;BRSQ=0.245;LDAF=0.2331;AVGPOST=0.7257;RSQ=0.3686;ERATE=0.0420;THETA=0.0008;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 186727013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0178;AVGPOST=0.9984;RSQ=0.9610;ERATE=0.0003;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 186727043 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6884;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186727107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186727187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186727189 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9169;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186727239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9164;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186727247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186727261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7952;ERATE=0.0005;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186727264 . GCA G 651 PASS INDEL;BAVGPOST=0.969;BRSQ=0.713;LDAF=0.0845;AVGPOST=0.9278;RSQ=0.6006;ERATE=0.0378;THETA=0.0018;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 186727425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186727569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5049;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186727707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186727751 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7162;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186727758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8958;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186727779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4300;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186727789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7106;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186727795 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9639;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186727922 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0111;AVGPOST=0.9987;RSQ=0.9616;ERATE=0.0003;THETA=0.0029;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186728068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0028;AVGPOST=0.9966;RSQ=0.5597;ERATE=0.0008;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186728259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186728267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7653;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186728339 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5812;ERATE=0.0006;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186728828 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0065;AVGPOST=0.9982;RSQ=0.8949;ERATE=0.0005;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186728837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8566;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186728851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9543;AVGPOST=0.9987;RSQ=0.9872;ERATE=0.0005;THETA=0.0008;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 186728894 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.8149;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186728913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.546;LDAF=0.0029;AVGPOST=0.9954;RSQ=0.3694;ERATE=0.0005;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186729019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9559;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0002;THETA=0.0009;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 186729054 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8195;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186729132 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7300;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186729138 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.2759;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186729157 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186729186 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8735;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186729201 . G GT 1834 PASS INDEL;BAVGPOST=0.960;BRSQ=0.700;LDAF=0.0902;AVGPOST=0.9179;RSQ=0.6016;ERATE=0.0242;THETA=0.0007;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 186729218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.6271;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186729287 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186729304 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7104;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186729358 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186729381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186729393 . AT A 24584 PASS INDEL;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2923;AVGPOST=0.9774;RSQ=0.9610;ERATE=0.0004;THETA=0.0004;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 186729400 . TG T 23433 PASS INDEL;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.2971;AVGPOST=0.9749;RSQ=0.9564;ERATE=0.0011;THETA=0.0008;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 186729401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9733;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0003;THETA=0.0005;AC=2126;AN=2184 GT:DS:GL:BD 0.97344321 1
1 186729407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186729441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0002;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186729541 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186729548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5102;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186729617 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186729687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186729722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0038;AVGPOST=0.9982;RSQ=0.8078;ERATE=0.0006;THETA=0.0023;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186730050 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186730104 . GT G 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186730135 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0004;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 186730152 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5348;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186730318 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5726;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186730341 . TA T 184 PASS INDEL;BAVGPOST=0.983;BRSQ=0.478;LDAF=0.0274;AVGPOST=0.9608;RSQ=0.4361;ERATE=0.0079;THETA=0.0018;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186730360 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0088;AVGPOST=0.9986;RSQ=0.9406;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186730382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9545;AVGPOST=0.9994;RSQ=0.9938;ERATE=0.0003;THETA=0.0006;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 186730628 . CT C 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186730650 rs79878277 AC A 510 PASS INDEL;BAVGPOST=0.998;BRSQ=0.792;LDAF=0.0074;AVGPOST=0.9969;RSQ=0.8365;ERATE=0.0002;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186730810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186730869 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.5123;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186730932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6639;ERATE=0.0006;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186731255 . CAT C 70 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186731361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0569;AVGPOST=0.9982;RSQ=0.9885;ERATE=0.0002;THETA=0.0006;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 186731365 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0053;AVGPOST=0.9988;RSQ=0.9005;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186731376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186731434 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9315;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186731570 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9559;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0003;THETA=0.0006;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 186731628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186731740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186731764 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7363;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186731765 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186731864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9544;AVGPOST=0.9991;RSQ=0.9914;ERATE=0.0004;THETA=0.0012;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 186731937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9733;AVGPOST=0.9996;RSQ=0.9928;ERATE=0.0003;THETA=0.0007;AC=2126;AN=2184 GT:DS:GL:BD 0.97344321 1
1 186731997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186732055 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5912;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186732071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186732103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0132;AVGPOST=0.9991;RSQ=0.9743;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186732114 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4291;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186732120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.979;LDAF=0.1035;AVGPOST=0.9940;RSQ=0.9735;ERATE=0.0006;THETA=0.0006;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 186732164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0097;AVGPOST=0.9989;RSQ=0.9490;ERATE=0.0004;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186732170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.0966;AVGPOST=0.9934;RSQ=0.9690;ERATE=0.0004;THETA=0.0027;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 186732173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6839;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186732246 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186732470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186732513 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6841;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186732521 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186732651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0149;AVGPOST=0.9980;RSQ=0.9477;ERATE=0.0004;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186732670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186732690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6442;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186732764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7423;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186732841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0085;AVGPOST=0.9992;RSQ=0.9660;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186732893 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0146;AVGPOST=0.9991;RSQ=0.9736;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186732916 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0142;AVGPOST=0.9993;RSQ=0.9789;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186732970 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5954;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186732987 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9311;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186733129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9434;AVGPOST=0.9989;RSQ=0.9920;ERATE=0.0003;THETA=0.0005;AC=2061;AN=2184 GT:DS:GL:BD 0.94368130 1
1 186733173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0456;AVGPOST=0.9992;RSQ=0.9919;ERATE=0.0004;THETA=0.0008;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 186733315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9731;AVGPOST=0.9992;RSQ=0.9892;ERATE=0.0002;THETA=0.0040;AC=2126;AN=2184 GT:DS:GL:BD 0.97344321 1
1 186733347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6495;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186733366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5729;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186733376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6745;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186733382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186733401 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186733439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186733467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186733495 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186733621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186733729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186733749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9142;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186733759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6585;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186733790 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7495;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186734030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4327;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186734040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0123;AVGPOST=0.9990;RSQ=0.9647;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186734064 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0048;AVGPOST=0.9965;RSQ=0.6842;ERATE=0.0005;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186734073 . TG T 149 PASS INDEL;BAVGPOST=0.997;BRSQ=0.618;LDAF=0.0055;AVGPOST=0.9934;RSQ=0.5622;ERATE=0.0006;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186734221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.9195;AVGPOST=0.9987;RSQ=0.9926;ERATE=0.0006;THETA=0.0006;AC=2009;AN=2184 GT:DS:GL:BD 0.91987181 1
1 186734263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9559;AVGPOST=0.9996;RSQ=0.9958;ERATE=0.0003;THETA=0.0007;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 186734312 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186734322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186734480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5884;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186734508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9024;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186734523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186734573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6222;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186734612 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.963;LDAF=0.2228;AVGPOST=0.9922;RSQ=0.9846;ERATE=0.0003;THETA=0.0007;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 186734621 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8521;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186734957 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8174;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186734974 . TG T 1138 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9371;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186735000 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186735003 . TTCAACCCC T 165 PASS INDEL;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7438;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186735004 . TCAACCCCTC T 359 PASS INDEL;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8598;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186735103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186735143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186735205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7576;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186735314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7707;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186735370 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9559;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0004;THETA=0.0008;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 186735474 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186735524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186735537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9496;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186735538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0065;AVGPOST=0.9986;RSQ=0.9060;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186735541 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.9205;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0002;THETA=0.0004;AC=2010;AN=2184 GT:DS:GL:BD 0.92032969 1
1 186735711 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2015;AVGPOST=0.9933;RSQ=0.9853;ERATE=0.0004;THETA=0.0003;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 186735736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9364;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186735831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9140;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186735895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9505;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186735992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.6123;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186736066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.888;LDAF=0.0223;AVGPOST=0.9939;RSQ=0.8920;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 186736079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.7176;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186736162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7100;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186736169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0064;AVGPOST=0.9970;RSQ=0.7989;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186736218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8483;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186736440 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186736530 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9559;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0003;THETA=0.0017;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 186736533 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5277;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186736574 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7779;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186736592 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6381;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186736703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9094;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186736779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6188;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186736925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0059;AVGPOST=0.9972;RSQ=0.8320;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186736963 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186737070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9543;AVGPOST=0.9989;RSQ=0.9901;ERATE=0.0003;THETA=0.0011;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 186737167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7096;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186737196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9559;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0003;THETA=0.0007;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 186737247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0121;AVGPOST=0.9987;RSQ=0.9515;ERATE=0.0004;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186737351 . A AC 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4851;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186737514 . ATTCT A 143 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8187;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186737532 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8637;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186737688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9400;ERATE=0.0002;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186737776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186737861 . A AT 341 PASS INDEL;BAVGPOST=0.996;BRSQ=0.773;LDAF=0.0077;AVGPOST=0.9955;RSQ=0.7646;ERATE=0.0005;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186738033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186738088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7684;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186738231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0100;AVGPOST=0.9993;RSQ=0.9700;ERATE=0.0002;THETA=0.0011;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186738439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9454;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186738500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9561;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186738539 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0821;AVGPOST=0.9984;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 186738635 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0418;AVGPOST=0.9973;RSQ=0.9755;ERATE=0.0003;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 186738696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186738757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5175;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186738832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8840;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186738850 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9081;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186738922 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8451;ERATE=0.0002;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186738979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8957;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186739200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6689;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186739291 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5908;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186739343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0055;AVGPOST=0.9984;RSQ=0.8838;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186739394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9503;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186739407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6098;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186739431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8625;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 186739603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8068;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186739650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8636;AVGPOST=0.9986;RSQ=0.9960;ERATE=0.0005;THETA=0.0004;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 186739705 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0579;AVGPOST=0.9993;RSQ=0.9960;ERATE=0.0003;THETA=0.0010;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 186739859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0202;AVGPOST=0.9978;RSQ=0.9695;ERATE=0.0003;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 186739879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9902;ERATE=0.0002;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186739904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186740010 . C CTT 120 PASS INDEL;BAVGPOST=0.994;BRSQ=0.566;LDAF=0.0113;AVGPOST=0.9857;RSQ=0.5311;ERATE=0.0031;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186740048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186740116 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8335;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186740325 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186740393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186740472 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5866;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186740484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0580;AVGPOST=0.9989;RSQ=0.9932;ERATE=0.0004;THETA=0.0006;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 186740509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8627;AVGPOST=0.9994;RSQ=0.9980;ERATE=0.0005;THETA=0.0003;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 186740598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186740600 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186740758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5338;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186740766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0420;AVGPOST=0.9960;RSQ=0.9614;ERATE=0.0003;THETA=0.0009;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 186740767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6318;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186740811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.8637;AVGPOST=0.9934;RSQ=0.9823;ERATE=0.0010;THETA=0.0009;AC=1891;AN=2184 GT:DS:GL:BD 0.86584246 1
1 186740833 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.2394;AVGPOST=0.9799;RSQ=0.9580;ERATE=0.0003;THETA=0.0005;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 186740845 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.2428;AVGPOST=0.9761;RSQ=0.9501;ERATE=0.0005;THETA=0.0008;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 186740940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0225;AVGPOST=0.9843;RSQ=0.7457;ERATE=0.0005;THETA=0.0010;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 186741115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8667;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186741158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8576;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186741202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.8969;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186741213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186741337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9545;AVGPOST=0.9984;RSQ=0.9862;ERATE=0.0003;THETA=0.0003;AC=2086;AN=2184 GT:DS:GL:BD 0.95512819 1
1 186741531 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7012;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186741536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.8631;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0003;THETA=0.0011;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 186741552 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0078;AVGPOST=0.9988;RSQ=0.9441;ERATE=0.0005;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186741555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9681;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186741621 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5075;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186741792 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4370;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186741866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6758;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186741987 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0829;AVGPOST=0.9985;RSQ=0.9935;ERATE=0.0005;THETA=0.0033;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 186742026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.827;LDAF=0.0077;AVGPOST=0.9973;RSQ=0.8510;ERATE=0.0006;THETA=0.0015;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186742037 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.820;LDAF=0.9019;AVGPOST=0.9097;RSQ=0.6274;ERATE=0.0085;THETA=0.0005;AC=2034;AN=2184 GT:DS:GL:BD 0.93131870 1
1 186742099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0832;AVGPOST=0.9979;RSQ=0.9899;ERATE=0.0004;THETA=0.0006;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 186742320 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7083;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186742343 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.4962;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186742473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.893;LDAF=0.0084;AVGPOST=0.9973;RSQ=0.8759;ERATE=0.0005;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186742537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7570;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186742540 rs35940964 GACAAT G 421 PASS INDEL;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7531;ERATE=0.0006;THETA=0.0044;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186742599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186742843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5602;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186742847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7312;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186742904 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0042;AVGPOST=0.9972;RSQ=0.7583;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186742947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2039;AVGPOST=0.9847;RSQ=0.9662;ERATE=0.0008;THETA=0.0014;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 186743088 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6858;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186743190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.619;LDAF=0.0089;AVGPOST=0.9901;RSQ=0.5754;ERATE=0.0007;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186743193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.607;LDAF=0.0050;AVGPOST=0.9944;RSQ=0.5219;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186743196 rs57376790 C CTA 34426 PASS INDEL;BAVGPOST=0.992;BRSQ=0.291;LDAF=0.9780;AVGPOST=0.9691;RSQ=0.4295;ERATE=0.0033;THETA=0.0008;AC=2163;AN=2184 GT:DS:GL:BD 0.99038464 1
1 186743264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8837;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186743350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5168;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186743479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186743674 rs79449199 A AT 55040 PASS INDEL;BAVGPOST=0.983;BRSQ=0.950;LDAF=0.8457;AVGPOST=0.9433;RSQ=0.8589;ERATE=0.0107;THETA=0.0008;AC=1872;AN=2184 GT:DS:GL:BD 0.85714287 1
1 186743710 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5309;ERATE=0.0004;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186743783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0116;AVGPOST=0.9993;RSQ=0.9811;ERATE=0.0003;THETA=0.0013;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186743903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8669;AVGPOST=0.9993;RSQ=0.9978;ERATE=0.0003;THETA=0.0006;AC=1893;AN=2184 GT:DS:GL:BD 0.86675823 1
1 186743917 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0081;AVGPOST=0.9989;RSQ=0.9437;ERATE=0.0002;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186743945 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186743973 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186744049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186744150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186744181 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186744261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8291;ERATE=0.0002;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186744297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0002;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186744362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9574;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0002;THETA=0.0006;AC=2091;AN=2184 GT:DS:GL:BD 0.95741761 1
1 186744376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8766;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0002;THETA=0.0005;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 186744444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7713;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186744533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186744557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186744861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0003;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186744874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8636;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0005;THETA=0.0016;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 186744949 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6484;ERATE=0.0006;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186744960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7185;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186744987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186745012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7725;ERATE=0.0006;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186745068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186745079 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8036;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186745165 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8844;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186745351 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9987;RSQ=0.9397;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186745368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7390;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186745445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9421;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186745497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0071;AVGPOST=0.9988;RSQ=0.9253;ERATE=0.0003;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186745500 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7075;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186745714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1025;AVGPOST=0.9960;RSQ=0.9825;ERATE=0.0005;THETA=0.0013;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 186745725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186745835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6729;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186745894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.9734;AVGPOST=0.9995;RSQ=0.9922;ERATE=0.0002;THETA=0.0010;AC=2126;AN=2184 GT:DS:GL:BD 0.97344321 1
1 186745922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0556;AVGPOST=0.9994;RSQ=0.9957;ERATE=0.0002;THETA=0.0005;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 186745964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5810;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186746025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8503;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186746075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6779;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186746301 . C CT 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4659;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186746321 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8651;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0012;AC=1889;AN=2184 GT:DS:GL:BD 0.86492676 1
1 186746425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7605;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186746462 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0244;AVGPOST=0.9996;RSQ=0.9933;ERATE=0.0003;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 186746522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186746544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6824;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186746556 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0825;AVGPOST=0.9986;RSQ=0.9936;ERATE=0.0004;THETA=0.0006;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 186746629 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7952;ERATE=0.0002;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186746653 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6628;ERATE=0.0005;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186746718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186746727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186746842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0032;AVGPOST=0.9975;RSQ=0.7177;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186746846 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.9734;AVGPOST=0.9995;RSQ=0.9907;ERATE=0.0003;THETA=0.0005;AC=2126;AN=2184 GT:DS:GL:BD 0.97344321 1
1 186746980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4909;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186746987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0056;AVGPOST=0.9984;RSQ=0.8827;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186747046 . TTC T 571 PASS INDEL;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0550;AVGPOST=0.9984;RSQ=0.9876;ERATE=0.0003;THETA=0.0008;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 186747047 . TCTC T 7713 PASS INDEL;BAVGPOST=0.996;BRSQ=0.967;LDAF=0.0559;AVGPOST=0.9963;RSQ=0.9757;ERATE=0.0005;THETA=0.0010;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 186747273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0025;AVGPOST=0.9960;RSQ=0.4602;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186747350 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0202;AVGPOST=0.9985;RSQ=0.9724;ERATE=0.0003;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 186747380 . A AT 90 PASS INDEL;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6889;ERATE=0.0005;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186747392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7417;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186747418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186747471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9769;ERATE=0.0003;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186747495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.3308;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186747508 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9569;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0002;THETA=0.0004;AC=2090;AN=2184 GT:DS:GL:BD 0.95695972 1
1 186747524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9162;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186747612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8536;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0008;AC=1864;AN=2184 GT:DS:GL:BD 0.85347986 1
1 186747628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8531;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186747631 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9862;ERATE=0.0002;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186747657 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0145;AVGPOST=0.9994;RSQ=0.9838;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186747723 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9565;AVGPOST=0.9988;RSQ=0.9906;ERATE=0.0003;THETA=0.0008;AC=2090;AN=2184 GT:DS:GL:BD 0.95695972 1
1 186747740 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0823;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0007;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 186747746 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6145;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186747747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0827;AVGPOST=0.9989;RSQ=0.9947;ERATE=0.0003;THETA=0.0007;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 186747779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186747780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186747797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5496;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186747801 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9565;AVGPOST=0.9989;RSQ=0.9891;ERATE=0.0003;THETA=0.0010;AC=2090;AN=2184 GT:DS:GL:BD 0.95695972 1
1 186747835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186748024 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186748077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186748114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5730;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186748143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9459;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186748225 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0002;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186748353 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0823;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0002;THETA=0.0007;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 186748485 . CTG C 218 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8161;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186748488 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186748672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5810;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186748687 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7488;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186748693 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8481;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186748838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8972;ERATE=0.0002;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186748986 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186749130 . AC A 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186749133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.907;LDAF=0.0241;AVGPOST=0.9951;RSQ=0.9181;ERATE=0.0004;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 186749233 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8645;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0005;THETA=0.0011;AC=1888;AN=2184 GT:DS:GL:BD 0.86446887 1
1 186749275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5540;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186749342 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186749495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186749619 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9699;ERATE=0.0002;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186749658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0553;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0009;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 186749736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0051;AVGPOST=0.9973;RSQ=0.8270;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186749743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7144;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186749768 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186749774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9782;ERATE=0.0004;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186749776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0178;AVGPOST=0.9940;RSQ=0.8772;ERATE=0.0004;THETA=0.0011;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 186749831 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.4660;ERATE=0.0006;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186749976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.862;LDAF=0.0117;AVGPOST=0.9944;RSQ=0.8261;ERATE=0.0005;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186749977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.6282;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186750029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.686;LDAF=0.0057;AVGPOST=0.9966;RSQ=0.7643;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186750143 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9801;ERATE=0.0002;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186750252 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186750295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186750306 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8866;ERATE=0.0003;THETA=0.0023;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186750326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6167;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186750492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0116;AVGPOST=0.9988;RSQ=0.9589;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186750580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7519;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186750590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0053;AVGPOST=0.9981;RSQ=0.8519;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186750633 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.8651;AVGPOST=0.9968;RSQ=0.9902;ERATE=0.0007;THETA=0.0011;AC=1888;AN=2184 GT:DS:GL:BD 0.86446887 1
1 186750644 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9993;RSQ=0.9540;ERATE=0.0003;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186750854 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9567;AVGPOST=0.9993;RSQ=0.9934;ERATE=0.0003;THETA=0.0007;AC=2090;AN=2184 GT:DS:GL:BD 0.95695972 1
1 186750882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7266;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186750936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186750949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8671;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186751063 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186751109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186751159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186751228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0562;AVGPOST=0.9989;RSQ=0.9923;ERATE=0.0003;THETA=0.0008;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 186751306 . G GT 478 PASS INDEL;BAVGPOST=0.991;BRSQ=0.691;LDAF=0.0199;AVGPOST=0.9814;RSQ=0.6532;ERATE=0.0045;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186751373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9121;ERATE=0.0004;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186751490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186751542 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186751593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6805;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186751603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6922;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186751733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0554;AVGPOST=0.9995;RSQ=0.9960;ERATE=0.0003;THETA=0.0009;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 186751734 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8030;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186751829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9978;RSQ=0.8231;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186751832 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186751856 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8419;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186751902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.2035;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186752006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5084;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186752029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6812;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186752038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9568;AVGPOST=0.9994;RSQ=0.9944;ERATE=0.0002;THETA=0.0009;AC=2090;AN=2184 GT:DS:GL:BD 0.95695972 1
1 186752134 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186752142 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9536;AVGPOST=0.9994;RSQ=0.9944;ERATE=0.0003;THETA=0.0008;AC=2083;AN=2184 GT:DS:GL:BD 0.95375460 1
1 186752193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186752217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5597;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186752237 . T TTA 52 PASS INDEL;BAVGPOST=0.968;BRSQ=0.326;LDAF=0.0821;AVGPOST=0.8735;RSQ=0.3432;ERATE=0.0105;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 186752343 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186752432 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0036;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186752445 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9880;ERATE=0.0003;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186752548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7217;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186752558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.919;LDAF=0.0115;AVGPOST=0.9984;RSQ=0.9417;ERATE=0.0003;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186752574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0555;AVGPOST=0.9984;RSQ=0.9886;ERATE=0.0003;THETA=0.0009;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 186752617 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186752690 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186752778 . C CTA 4715 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0190;AVGPOST=0.9989;RSQ=0.9742;ERATE=0.0002;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 186752984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186753010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6966;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186753083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0044;AVGPOST=0.9986;RSQ=0.8561;ERATE=0.0004;THETA=0.0017;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186753122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6356;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186753315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186753331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6326;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186753397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186753597 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0115;AVGPOST=0.9979;RSQ=0.9237;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186753689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5142;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186753848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.9775;AVGPOST=0.9981;RSQ=0.9651;ERATE=0.0004;THETA=0.0015;AC=2136;AN=2184 GT:DS:GL:BD 0.97802198 1
1 186753891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186753898 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5277;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186753985 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9381;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186754053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186754057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.5854;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186754077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0550;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0016;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 186754083 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3934;ERATE=0.0002;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186754100 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6393;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186754242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.797;LDAF=0.0045;AVGPOST=0.9972;RSQ=0.7391;ERATE=0.0007;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186754307 . CT C 164 PASS INDEL;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186754320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9698;ERATE=0.0002;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186754354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0112;AVGPOST=0.9984;RSQ=0.9418;ERATE=0.0004;THETA=0.0013;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186754399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.6751;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186754408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0087;AVGPOST=0.9968;RSQ=0.8608;ERATE=0.0004;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186754410 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9843;ERATE=0.0003;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186754421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8289;ERATE=0.0003;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186754441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.965;LDAF=0.0660;AVGPOST=0.9969;RSQ=0.9820;ERATE=0.0004;THETA=0.0011;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 186754602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.905;LDAF=0.0148;AVGPOST=0.9965;RSQ=0.9100;ERATE=0.0003;THETA=0.0014;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186754710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186754766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4699;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186754852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186754877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9982;RSQ=0.8855;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186755026 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186755128 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.7905;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186755140 rs71672002 ACT A 9200 PASS INDEL;BAVGPOST=0.974;BRSQ=0.904;LDAF=0.1324;AVGPOST=0.9622;RSQ=0.8707;ERATE=0.0008;THETA=0.0013;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 186755181 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.487;LDAF=0.0034;AVGPOST=0.9967;RSQ=0.5773;ERATE=0.0008;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186755222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.604;LDAF=0.0048;AVGPOST=0.9938;RSQ=0.4945;ERATE=0.0011;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186755236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3949;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186755271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4430;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186755285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186755452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0673;AVGPOST=0.9994;RSQ=0.9960;ERATE=0.0003;THETA=0.0009;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 186755501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8964;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186755516 rs60572839 C CA 422 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9052;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186755525 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8881;ERATE=0.0004;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186755563 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7838;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186755696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8580;ERATE=0.0006;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186755740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4660;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186755815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186755965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.486;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6783;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186756092 . AAAC A 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.4850;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186756129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6593;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186756259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7720;ERATE=0.0004;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186756342 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.712;LDAF=0.0062;AVGPOST=0.9976;RSQ=0.8399;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186756496 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186756529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8584;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186756531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8306;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186756619 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4757;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186756936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.963;LDAF=0.0670;AVGPOST=0.9984;RSQ=0.9894;ERATE=0.0004;THETA=0.0008;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 186756983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0048;AVGPOST=0.9980;RSQ=0.8347;ERATE=0.0002;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186756995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7252;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186757089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.8901;AVGPOST=0.9981;RSQ=0.9926;ERATE=0.0003;THETA=0.0007;AC=1943;AN=2184 GT:DS:GL:BD 0.88965201 1
1 186757098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6921;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186757274 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186757341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0671;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0010;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 186757541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4676;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186757632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4598;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186757689 . ATG A 1411 PASS INDEL;BAVGPOST=0.945;BRSQ=0.646;LDAF=0.1253;AVGPOST=0.8878;RSQ=0.5658;ERATE=0.0404;THETA=0.0012;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 186757770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.957;LDAF=0.0631;AVGPOST=0.9928;RSQ=0.9587;ERATE=0.0003;THETA=0.0014;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 186757889 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5364;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186757940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0065;AVGPOST=0.9982;RSQ=0.8844;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186758135 rs61311084 CAA C 726 PASS INDEL;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9469;ERATE=0.0002;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186758255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186758304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8786;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186758334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5725;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186758352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8107;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186758419 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.807;LDAF=0.0114;AVGPOST=0.9951;RSQ=0.8282;ERATE=0.0005;THETA=0.0017;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186758500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.7449;ERATE=0.0005;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186758588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0093;AVGPOST=0.9970;RSQ=0.8620;ERATE=0.0005;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186758607 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.120;LDAF=0.9779;AVGPOST=0.9618;RSQ=0.3343;ERATE=0.0047;THETA=0.0009;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 186758619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.515;LDAF=0.0295;AVGPOST=0.9613;RSQ=0.4907;ERATE=0.0049;THETA=0.0008;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 186758683 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0046;AVGPOST=0.9942;RSQ=0.4575;ERATE=0.0009;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186758713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0081;AVGPOST=0.9947;RSQ=0.7364;ERATE=0.0006;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186758943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7596;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186758969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7671;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186759076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0055;AVGPOST=0.9994;RSQ=0.9541;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186759125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4709;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186759310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.9133;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186759316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7954;ERATE=0.0002;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186759779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7899;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186759831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186759899 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.2053;AVGPOST=0.9673;RSQ=0.9280;ERATE=0.0013;THETA=0.0009;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 186760022 . T TC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4706;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186760092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0089;AVGPOST=0.9981;RSQ=0.9311;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186760177 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0051;AVGPOST=0.9978;RSQ=0.8403;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186760182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186760348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5198;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186760488 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186760616 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5654;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186760690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6657;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186760733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5335;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186760758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.973;LDAF=0.0688;AVGPOST=0.9978;RSQ=0.9863;ERATE=0.0006;THETA=0.0009;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 186760816 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.624;LDAF=0.0055;AVGPOST=0.9948;RSQ=0.6432;ERATE=0.0008;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186760837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.792;LDAF=0.0077;AVGPOST=0.9932;RSQ=0.6626;ERATE=0.0006;THETA=0.0014;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186760952 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.814;LDAF=0.7860;AVGPOST=0.8724;RSQ=0.7342;ERATE=0.0317;THETA=0.0011;AC=1788;AN=2184 GT:DS:GL:BD 0.81868130 1
1 186760997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.635;LDAF=0.0052;AVGPOST=0.9947;RSQ=0.5947;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186761077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5487;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186761093 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0707;AVGPOST=0.9983;RSQ=0.9908;ERATE=0.0003;THETA=0.0013;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 186761109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6097;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186761172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0696;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0003;THETA=0.0010;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 186761235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9564;AVGPOST=0.9984;RSQ=0.9844;ERATE=0.0004;THETA=0.0009;AC=2090;AN=2184 GT:DS:GL:BD 0.95695972 1
1 186761583 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8671;AVGPOST=0.9967;RSQ=0.9903;ERATE=0.0005;THETA=0.0012;AC=1895;AN=2184 GT:DS:GL:BD 0.86767399 1
1 186761597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9565;AVGPOST=0.9987;RSQ=0.9867;ERATE=0.0004;THETA=0.0017;AC=2090;AN=2184 GT:DS:GL:BD 0.95695972 1
1 186761622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7851;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186761644 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0074;AVGPOST=0.9956;RSQ=0.7842;ERATE=0.0004;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186761691 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7850;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186761734 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0628;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0011;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 186761776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186761789 rs67408960 G GT 170 PASS INDEL;BAVGPOST=0.991;BRSQ=0.608;LDAF=0.0241;AVGPOST=0.9719;RSQ=0.5506;ERATE=0.0035;THETA=0.0012;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 186761809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9123;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186761892 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8120;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186761893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7753;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186761913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8031;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186761995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0628;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0033;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 186762079 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0556;AVGPOST=0.9985;RSQ=0.9897;ERATE=0.0003;THETA=0.0011;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 186762180 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186762217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9360;ERATE=0.0002;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186762221 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186762235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186762243 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6126;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186762320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5613;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186762329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0135;AVGPOST=0.9977;RSQ=0.9303;ERATE=0.0003;THETA=0.0015;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186762330 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186762356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186762442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0066;AVGPOST=0.9975;RSQ=0.8459;ERATE=0.0004;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186762499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186762503 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9605;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186762505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8134;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186762555 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8618;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186762659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8782;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186762665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186762816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0532;AVGPOST=0.9990;RSQ=0.9926;ERATE=0.0003;THETA=0.0015;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 186762923 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8571;AVGPOST=0.9952;RSQ=0.9878;ERATE=0.0008;THETA=0.0010;AC=1873;AN=2184 GT:DS:GL:BD 0.85760075 1
1 186762974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186762991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9771;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186763054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0003;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186763179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9566;AVGPOST=0.9991;RSQ=0.9904;ERATE=0.0004;THETA=0.0023;AC=2090;AN=2184 GT:DS:GL:BD 0.95695972 1
1 186763195 . A AT 851 PASS INDEL;BAVGPOST=0.996;BRSQ=0.768;LDAF=0.0070;AVGPOST=0.9960;RSQ=0.7798;ERATE=0.0003;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186763241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186763306 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186763320 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186763328 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0521;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0003;THETA=0.0011;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 186763329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.8995;ERATE=0.0003;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186763420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4468;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186763544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7527;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186763636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7447;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186763690 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0109;AVGPOST=0.9994;RSQ=0.9728;ERATE=0.0003;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186763716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186763738 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186763813 . G GC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7321;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186763814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186763861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7230;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186763924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0524;AVGPOST=0.9989;RSQ=0.9902;ERATE=0.0003;THETA=0.0007;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 186763942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9428;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186763959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8612;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186763960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6861;ERATE=0.0002;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186763975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0517;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0003;THETA=0.0009;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 186764202 rs11450623 C CT 103306 PASS INDEL;BAVGPOST=0.994;BRSQ=0.946;LDAF=0.9464;AVGPOST=0.9850;RSQ=0.8879;ERATE=0.0042;THETA=0.0007;AC=2077;AN=2184 GT:DS:GL:BD 0.95100731 1
1 186764356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5656;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186764420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6024;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186764636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0118;AVGPOST=0.9979;RSQ=0.9131;ERATE=0.0005;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186764678 . G GT 120 PASS INDEL;BAVGPOST=0.997;BRSQ=0.352;LDAF=0.0095;AVGPOST=0.9892;RSQ=0.5613;ERATE=0.0007;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186764701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0522;AVGPOST=0.9991;RSQ=0.9918;ERATE=0.0004;THETA=0.0006;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 186764721 . A AT 1272 PASS INDEL;BAVGPOST=0.995;BRSQ=0.955;LDAF=0.0541;AVGPOST=0.9977;RSQ=0.9796;ERATE=0.0007;THETA=0.0010;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 186764772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.831;LDAF=0.0129;AVGPOST=0.9897;RSQ=0.6429;ERATE=0.0010;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186765173 . G GT 127 PASS INDEL;BAVGPOST=0.994;BRSQ=0.272;LDAF=0.0280;AVGPOST=0.9544;RSQ=0.3703;ERATE=0.0033;THETA=0.0013;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186765196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.837;LDAF=0.0522;AVGPOST=0.9856;RSQ=0.8832;ERATE=0.0005;THETA=0.0009;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 186765216 . A AT 1051 PASS INDEL;BAVGPOST=0.983;BRSQ=0.831;LDAF=0.0518;AVGPOST=0.9845;RSQ=0.8743;ERATE=0.0010;THETA=0.0026;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 186765267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0106;AVGPOST=0.9937;RSQ=0.7185;ERATE=0.0009;THETA=0.0018;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186765430 . TG T 362 PASS INDEL;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0113;AVGPOST=0.9977;RSQ=0.9301;ERATE=0.0003;THETA=0.0020;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186765458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0048;AVGPOST=0.9947;RSQ=0.5772;ERATE=0.0005;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186765486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9714;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186765615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186765647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9043;ERATE=0.0002;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186765683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186765729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.584;LDAF=0.0184;AVGPOST=0.9773;RSQ=0.5188;ERATE=0.0093;THETA=0.0011;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186765884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0098;AVGPOST=0.9992;RSQ=0.9621;ERATE=0.0003;THETA=0.0014;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186766014 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0513;AVGPOST=0.9990;RSQ=0.9917;ERATE=0.0002;THETA=0.0011;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 186766015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0027;AVGPOST=0.9967;RSQ=0.5545;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186766030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9711;ERATE=0.0002;THETA=0.0018;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186766049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186766053 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186766055 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9552;AVGPOST=0.9980;RSQ=0.9819;ERATE=0.0004;THETA=0.0020;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 186766168 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186766242 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8536;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186766305 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5871;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186766332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5043;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186766525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5621;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186766534 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186766642 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186766691 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7368;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186766771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186766774 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9588;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186766909 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0372;AVGPOST=0.9956;RSQ=0.9489;ERATE=0.0005;THETA=0.0007;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 186767016 . AC A 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5817;ERATE=0.0002;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186767062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0088;AVGPOST=0.9982;RSQ=0.9079;ERATE=0.0003;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186767069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9899;ERATE=0.0003;THETA=0.0010;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186767090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0115;AVGPOST=0.9992;RSQ=0.9735;ERATE=0.0002;THETA=0.0018;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186767093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0021;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186767128 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0522;AVGPOST=0.9993;RSQ=0.9952;ERATE=0.0002;THETA=0.0011;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 186767135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0097;AVGPOST=0.9979;RSQ=0.9308;ERATE=0.0002;THETA=0.0014;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186767272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0106;AVGPOST=0.9993;RSQ=0.9718;ERATE=0.0002;THETA=0.0018;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186767317 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6792;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186767327 . AAG A 47 PASS INDEL;BAVGPOST=0.995;BRSQ=0.676;LDAF=0.0107;AVGPOST=0.9876;RSQ=0.5537;ERATE=0.0032;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186767332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4722;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186767338 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.9343;ERATE=0.0002;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186767354 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6619;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186767419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9077;ERATE=0.0002;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186767454 . A AG 2346 PASS INDEL;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0503;AVGPOST=0.9977;RSQ=0.9797;ERATE=0.0003;THETA=0.0012;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 186767455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0499;AVGPOST=0.9981;RSQ=0.9833;ERATE=0.0003;THETA=0.0010;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 186767457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0501;AVGPOST=0.9981;RSQ=0.9839;ERATE=0.0003;THETA=0.0011;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 186767474 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186767562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4296;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186767565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0062;AVGPOST=0.9990;RSQ=0.9423;ERATE=0.0003;THETA=0.0018;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186767648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6852;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186767673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8917;ERATE=0.0004;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186767691 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186767703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9992;RSQ=0.9732;ERATE=0.0003;THETA=0.0016;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186767709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0669;AVGPOST=0.9985;RSQ=0.9908;ERATE=0.0003;THETA=0.0010;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 186767770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9558;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186767772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5273;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186767832 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186767880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.882;LDAF=0.0370;AVGPOST=0.9916;RSQ=0.9126;ERATE=0.0004;THETA=0.0007;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 186767977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186767992 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8632;AVGPOST=0.9981;RSQ=0.9952;ERATE=0.0003;THETA=0.0009;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 186768017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186768045 rs11355666 GA G 65838 PASS INDEL;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.9711;AVGPOST=0.9969;RSQ=0.9537;ERATE=0.0007;THETA=0.0010;AC=2123;AN=2184 GT:DS:GL:BD 0.97206962 1
1 186768053 . AT A 386 PASS INDEL;BAVGPOST=0.858;BRSQ=0.291;LDAF=0.1787;AVGPOST=0.7687;RSQ=0.3572;ERATE=0.0361;THETA=0.0010;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 186768272 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6927;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186768311 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0535;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0004;THETA=0.0012;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 186768355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8081;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186768403 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6684;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186768446 . GTGT G 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6827;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186768597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0539;AVGPOST=0.9989;RSQ=0.9921;ERATE=0.0003;THETA=0.0010;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 186768760 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8636;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0003;THETA=0.0011;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 186768795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5809;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186768819 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186768879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8751;AVGPOST=0.9983;RSQ=0.9949;ERATE=0.0004;THETA=0.0008;AC=1912;AN=2184 GT:DS:GL:BD 0.87545788 1
1 186768924 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186769002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186769006 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0532;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0002;THETA=0.0009;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 186769140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186769213 . C CT 1797 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0566;AVGPOST=0.9982;RSQ=0.9880;ERATE=0.0005;THETA=0.0010;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 186769215 rs61134382 T TA 10847 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0559;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0025;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 186769384 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0004;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186769403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8328;ERATE=0.0003;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186769427 . CA C 260 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7245;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186769465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186769500 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8772;AVGPOST=0.9986;RSQ=0.9958;ERATE=0.0003;THETA=0.0010;AC=1916;AN=2184 GT:DS:GL:BD 0.87728935 1
1 186769548 . CT C 127 PASS INDEL;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6701;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186769572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0529;AVGPOST=0.9993;RSQ=0.9947;ERATE=0.0002;THETA=0.0012;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 186769589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0050;AVGPOST=0.9984;RSQ=0.8754;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186769599 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0679;AVGPOST=0.9982;RSQ=0.9901;ERATE=0.0004;THETA=0.0016;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 186769618 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186769624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5283;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186769670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0535;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0002;THETA=0.0011;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 186769743 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9283;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186769773 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5996;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186769802 . A AGAGT 236 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0038;AVGPOST=0.9966;RSQ=0.6449;ERATE=0.0006;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186769829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5181;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186769891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0121;AVGPOST=0.9990;RSQ=0.9719;ERATE=0.0002;THETA=0.0012;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186769917 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9765;ERATE=0.0003;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186769951 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186770002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9233;ERATE=0.0002;THETA=0.0017;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186770081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6762;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186770083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.9071;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186770124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6347;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186770144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186770285 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8644;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186770336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.853;LDAF=0.0252;AVGPOST=0.9935;RSQ=0.8926;ERATE=0.0004;THETA=0.0015;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 186770482 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186770579 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186770604 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5298;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186770639 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186770700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186770770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8531;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186770801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5016;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186770848 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5301;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186770931 . A AATG 479 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6627;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186771026 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186771227 . T TA 56 PASS INDEL;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0045;AVGPOST=0.9936;RSQ=0.3964;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186771255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4932;ERATE=0.0005;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186771413 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0027;AVGPOST=0.9966;RSQ=0.4362;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186771530 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.6863;ERATE=0.0005;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186771544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9463;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186771701 . C CA 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.509;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3747;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186771739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9989;RSQ=0.9387;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186771740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8448;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186772014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186772130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186772138 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186772261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186772316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0002;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186772393 . G GC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5253;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186772551 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186772666 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186772714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0050;AVGPOST=0.9976;RSQ=0.8438;ERATE=0.0002;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186772757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186772766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5444;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186772966 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5224;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186773049 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186773090 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8927;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186773239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.815;LDAF=0.0166;AVGPOST=0.9937;RSQ=0.8648;ERATE=0.0003;THETA=0.0010;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186773293 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.8003;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186773309 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0247;AVGPOST=0.9955;RSQ=0.9248;ERATE=0.0003;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 186773330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7823;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186773412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186773422 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6178;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186773459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186773521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8234;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186773527 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8272;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186773535 . A AG 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186773549 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186773555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5754;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186773595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5286;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186773604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9986;RSQ=0.9273;ERATE=0.0002;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186773713 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186773843 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8638;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0003;THETA=0.0012;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 186773905 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.937;LDAF=0.0209;AVGPOST=0.9970;RSQ=0.9425;ERATE=0.0003;THETA=0.0013;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 186773933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0101;AVGPOST=0.9980;RSQ=0.9109;ERATE=0.0005;THETA=0.0030;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186774037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6644;ERATE=0.0009;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186774129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186774402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.749;LDAF=0.0072;AVGPOST=0.9977;RSQ=0.8555;ERATE=0.0005;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186774412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0135;AVGPOST=0.9984;RSQ=0.9498;ERATE=0.0003;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186774434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9991;RSQ=0.9468;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186774480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6464;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186774600 . ATT A 11006 PASS INDEL;BAVGPOST=0.666;BRSQ=0.406;LDAF=0.5687;AVGPOST=0.6835;RSQ=0.4523;ERATE=0.0655;THETA=0.0024;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 186774602 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.766;BRSQ=0.533;LDAF=0.6036;AVGPOST=0.7399;RSQ=0.5150;ERATE=0.0753;THETA=0.0008;AC=1410;AN=2184 GT:DS:GL:BD 0.64560437 1
1 186774791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9541;AVGPOST=0.9959;RSQ=0.9625;ERATE=0.0005;THETA=0.0010;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 186774816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8097;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186774817 . T TA 31 PASS INDEL;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0061;AVGPOST=0.9926;RSQ=0.5274;ERATE=0.0014;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186774827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4637;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186774872 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9860;ERATE=0.0003;THETA=0.0017;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186774893 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.2506;AVGPOST=0.9798;RSQ=0.9599;ERATE=0.0011;THETA=0.0008;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 186774897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5816;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186775074 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186775088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.7901;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186775121 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186775129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9362;ERATE=0.0002;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186775189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186775193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186775219 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186775224 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6309;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186775311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186775327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9169;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186775466 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5465;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186775571 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.7075;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186775763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6053;ERATE=0.0002;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186775777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0262;AVGPOST=0.9996;RSQ=0.9923;ERATE=0.0003;THETA=0.0010;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 186775820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5782;ERATE=0.0005;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186776058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0120;AVGPOST=0.9995;RSQ=0.9825;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186776106 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4688;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186776139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8160;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186776185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6332;AVGPOST=0.9885;RSQ=0.9803;ERATE=0.0009;THETA=0.0005;AC=1382;AN=2184 GT:DS:GL:BD 0.63278389 1
1 186776195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186776210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.2066;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186776225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7846;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186776245 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186776287 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186776393 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186776497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5519;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186776522 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9681;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186776725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7639;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186776763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6297;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186776765 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9298;AVGPOST=0.9993;RSQ=0.9952;ERATE=0.0003;THETA=0.0006;AC=2031;AN=2184 GT:DS:GL:BD 0.92994505 1
1 186776786 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6611;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186776795 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186776829 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0002;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186776884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9578;AVGPOST=0.9987;RSQ=0.9880;ERATE=0.0004;THETA=0.0009;AC=2092;AN=2184 GT:DS:GL:BD 0.95787543 1
1 186776914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8571;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186776915 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9841;ERATE=0.0003;THETA=0.0018;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186776950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9560;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0002;THETA=0.0007;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 186776962 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9267;ERATE=0.0002;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186776989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5811;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186777016 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186777031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186777119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9722;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186777211 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0063;AVGPOST=0.9989;RSQ=0.9206;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186777215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7391;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186777235 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6390;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186777237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6126;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186777275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186777295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0096;AVGPOST=0.9983;RSQ=0.9218;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186777329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186777344 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186777368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6678;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186777372 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.889;LDAF=0.0360;AVGPOST=0.9908;RSQ=0.8911;ERATE=0.0004;THETA=0.0014;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 186777378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.920;LDAF=0.0407;AVGPOST=0.9898;RSQ=0.9033;ERATE=0.0007;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 186777429 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.4953;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186777430 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186777696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0526;AVGPOST=0.9994;RSQ=0.9942;ERATE=0.0003;THETA=0.0010;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 186777850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186778089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0186;AVGPOST=0.9958;RSQ=0.9161;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 186778090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.711;LDAF=0.0050;AVGPOST=0.9969;RSQ=0.7419;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186778111 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0263;AVGPOST=0.9978;RSQ=0.9604;ERATE=0.0005;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 186778171 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0020;AVGPOST=0.9971;RSQ=0.3497;ERATE=0.0008;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186778172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.575;LDAF=0.0062;AVGPOST=0.9934;RSQ=0.6037;ERATE=0.0008;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186778193 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0329;AVGPOST=0.9986;RSQ=0.9816;ERATE=0.0003;THETA=0.0009;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 186778251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.476;LDAF=0.0276;AVGPOST=0.9612;RSQ=0.4355;ERATE=0.0042;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186778317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9840;ERATE=0.0003;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186778473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9965;RSQ=0.7756;ERATE=0.0008;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186778793 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0043;AVGPOST=0.9947;RSQ=0.4846;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186779173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.3112;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186779181 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8204;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186779213 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6665;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186779375 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0121;AVGPOST=0.9984;RSQ=0.9472;ERATE=0.0004;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186779499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8220;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186779535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.937;LDAF=0.2162;AVGPOST=0.9819;RSQ=0.9635;ERATE=0.0008;THETA=0.0005;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 186779565 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6821;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186779684 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8195;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186779714 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6859;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186779918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9635;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186779943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0268;AVGPOST=0.9979;RSQ=0.9669;ERATE=0.0004;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 186780313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186780381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5623;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186780425 . TA T 196 PASS INDEL;BAVGPOST=0.976;BRSQ=0.408;LDAF=0.0354;AVGPOST=0.9515;RSQ=0.4626;ERATE=0.0103;THETA=0.0012;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 186780572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.785;LDAF=0.0049;AVGPOST=0.9961;RSQ=0.6760;ERATE=0.0006;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186780605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6244;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186780610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186780685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8643;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186780698 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.8198;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186780733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5268;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186781134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186781141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2180;AVGPOST=0.9937;RSQ=0.9845;ERATE=0.0005;THETA=0.0004;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 186781393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0157;AVGPOST=0.9978;RSQ=0.9436;ERATE=0.0004;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186781423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.425;LDAF=0.0166;AVGPOST=0.9770;RSQ=0.4369;ERATE=0.0041;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186781550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7443;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186781649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.519;LDAF=0.0310;AVGPOST=0.9672;RSQ=0.5782;ERATE=0.0098;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 186781669 . CAATT C 851 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0063;AVGPOST=0.9990;RSQ=0.9261;ERATE=0.0005;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186781688 . TGGAAG T 176 PASS INDEL;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4340;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186781842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4409;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186781993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9104;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186781998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7286;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186782140 . TCA T 323 PASS INDEL;BAVGPOST=0.969;BRSQ=0.636;LDAF=0.0718;AVGPOST=0.9242;RSQ=0.5370;ERATE=0.0256;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 186782223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7887;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186782496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186782574 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8557;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186782733 . T TG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186782783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186782845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5166;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186782908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0127;AVGPOST=0.9989;RSQ=0.9610;ERATE=0.0004;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186782986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186783125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0298;AVGPOST=0.9976;RSQ=0.9690;ERATE=0.0003;THETA=0.0007;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 186783140 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6650;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186783208 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0002;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186783262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9160;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186783268 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8704;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186783277 . TAG T 164 PASS INDEL;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8726;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186783382 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.936;LDAF=0.0149;AVGPOST=0.9993;RSQ=0.9777;ERATE=0.0002;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186783429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7566;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186783480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9174;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186783564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186783580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7492;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186783591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5847;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186783783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186783796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186783872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186783927 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7932;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186784001 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0049;AVGPOST=0.9990;RSQ=0.9280;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186784015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186784057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9922;ERATE=0.0002;THETA=0.0012;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186784072 MERGED_DEL_2_6560 TTGAATTTAGGCTCGTGTGGATGTAGGGACTTGTGTGACAACCAATGGGCAGGTCTTGAGATTTTAAAACTAAGAGTCTAGTGAAACAGAAATCTAGTGGCTATGAGAGTCTGAAAGGCAGAAATTTAGGAGTCAGCTGCCAGCGTAGAGGTAGTGATTCACTTCTTCATTCATTAGTCTAATGTTTATT T . . SV;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0004;CIEND=-74,79;CIPOS=-84,73;END=186791491;HOMLEN=0;HOMSEQ;SOURCE=BreakDancer_186784075_186791481,Ge GT:DS:GL:BD 0.00183150 0
1 186784139 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5030;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186784140 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0314;AVGPOST=0.9985;RSQ=0.9813;ERATE=0.0004;THETA=0.0015;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 186784171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186784215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0002;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186784304 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186784427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9846;ERATE=0.0002;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186784435 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6474;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186784505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2459;AVGPOST=0.9958;RSQ=0.9907;ERATE=0.0003;THETA=0.0019;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 186784506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.939;LDAF=0.0561;AVGPOST=0.9958;RSQ=0.9701;ERATE=0.0003;THETA=0.0006;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 186784513 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186784524 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186784675 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186784700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9411;ERATE=0.0004;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186784714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9257;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186784770 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0091;AVGPOST=0.9980;RSQ=0.9145;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186784928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186785013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0057;AVGPOST=0.9976;RSQ=0.8190;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186785138 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9639;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186785199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186785291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186785300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186785328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7579;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186785366 . CAA C 775 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186785560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5341;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186785658 . CAGT C 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186785668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8221;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186785773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9805;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186785800 . C CA 57 PASS INDEL;BAVGPOST=0.999;BRSQ=0.466;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4173;ERATE=0.0009;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186785842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7871;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186785888 rs75673902 G GA 67145 PASS INDEL;BAVGPOST=0.965;BRSQ=0.543;LDAF=0.9363;AVGPOST=0.9288;RSQ=0.5450;ERATE=0.0192;THETA=0.0008;AC=2083;AN=2184 GT:DS:GL:BD 0.95375460 1
1 186785984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186786032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2304;AVGPOST=0.9962;RSQ=0.9909;ERATE=0.0004;THETA=0.0005;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 186786065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.965;LDAF=0.0993;AVGPOST=0.9918;RSQ=0.9648;ERATE=0.0003;THETA=0.0003;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 186786070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186786097 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0086;AVGPOST=0.9994;RSQ=0.9720;ERATE=0.0002;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186786219 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2306;AVGPOST=0.9957;RSQ=0.9900;ERATE=0.0004;THETA=0.0008;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 186786355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0534;AVGPOST=0.9986;RSQ=0.9882;ERATE=0.0003;THETA=0.0016;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 186786396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186786556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8142;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186786587 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9836;ERATE=0.0003;THETA=0.0010;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186786673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9034;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186786694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9654;ERATE=0.0003;THETA=0.0022;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186786807 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9732;ERATE=0.0002;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186786924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0129;AVGPOST=0.9991;RSQ=0.9707;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186786957 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4999;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186786976 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186787038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5712;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186787066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0115;AVGPOST=0.9997;RSQ=0.9902;ERATE=0.0002;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186787073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9889;ERATE=0.0002;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186787117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9986;RSQ=0.8998;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186787132 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186787304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9575;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186787442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186787454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9122;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186787771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0069;AVGPOST=0.9982;RSQ=0.9105;ERATE=0.0004;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186787867 . GA G 172 PASS INDEL;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0077;AVGPOST=0.9966;RSQ=0.8119;ERATE=0.0006;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186787990 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186788020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9864;ERATE=0.0003;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186788264 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0272;AVGPOST=0.9994;RSQ=0.9889;ERATE=0.0003;THETA=0.0009;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 186788548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9712;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186788604 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0048;AVGPOST=0.9978;RSQ=0.8139;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186788738 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.9016;ERATE=0.0002;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186788953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186789202 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.944;LDAF=0.0157;AVGPOST=0.9984;RSQ=0.9664;ERATE=0.0004;THETA=0.0009;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186789234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186789345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186789395 . A AT 34 PASS INDEL;BAVGPOST=0.997;BRSQ=0.658;LDAF=0.0068;AVGPOST=0.9935;RSQ=0.6421;ERATE=0.0008;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186789415 . T TC 193 PASS INDEL;BAVGPOST=0.976;BRSQ=0.338;LDAF=0.0767;AVGPOST=0.8803;RSQ=0.3431;ERATE=0.0061;THETA=0.0009;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 186789457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0079;AVGPOST=0.9896;RSQ=0.5165;ERATE=0.0011;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186789554 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4259;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186789660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8249;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186789687 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0021;AVGPOST=0.9969;RSQ=0.5175;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186789798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9891;ERATE=0.0003;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186789939 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186789991 . T TA 35 PASS INDEL;BAVGPOST=0.997;BRSQ=0.525;LDAF=0.0059;AVGPOST=0.9923;RSQ=0.4854;ERATE=0.0012;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186789992 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0038;AVGPOST=0.9957;RSQ=0.5106;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186790189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8332;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186790242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186790308 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186790352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186790452 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0270;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0002;THETA=0.0010;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 186790465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0066;AVGPOST=0.9968;RSQ=0.8219;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186790467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186790561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8718;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186790626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0071;AVGPOST=0.9991;RSQ=0.9512;ERATE=0.0003;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186790708 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186790867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9013;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186790895 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0070;AVGPOST=0.9992;RSQ=0.9546;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186790929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.873;LDAF=0.0165;AVGPOST=0.9955;RSQ=0.9036;ERATE=0.0006;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 186790970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0070;AVGPOST=0.9979;RSQ=0.8789;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186790976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1143;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 186790980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9985;RSQ=0.4288;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186791053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9442;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186791159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7980;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186791162 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0040;AVGPOST=0.9986;RSQ=0.8500;ERATE=0.0005;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186791172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9746;ERATE=0.0002;THETA=0.0016;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186791266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186791269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6401;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186791284 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186791425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186791518 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9899;ERATE=0.0002;THETA=0.0014;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186791651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9563;ERATE=0.0002;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186791765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5880;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186791789 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5979;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186791865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186791910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9988;RSQ=0.9321;ERATE=0.0002;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186791928 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6174;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186791947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7312;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186792043 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0121;AVGPOST=0.9995;RSQ=0.9816;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186792130 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5307;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186792162 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8202;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186792162 . CA C 137 PASS INDEL;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0041;AVGPOST=0.9958;RSQ=0.5945;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186792182 . CACACAT C 622 PASS INDEL;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8593;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186792267 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9845;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186792356 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186792418 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4777;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186792491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9527;ERATE=0.0003;THETA=0.0013;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186792521 . TC T 1908 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0125;AVGPOST=0.9976;RSQ=0.9247;ERATE=0.0005;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186792596 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8506;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186792691 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186792742 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0002;THETA=0.0012;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186792807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0528;AVGPOST=0.9990;RSQ=0.9917;ERATE=0.0003;THETA=0.0006;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 186792836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0002;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186792901 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9364;ERATE=0.0002;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186792971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2301;AVGPOST=0.9923;RSQ=0.9819;ERATE=0.0004;THETA=0.0040;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 186793040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0274;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0002;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 186793063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5457;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186793103 . TG T 1934 PASS INDEL;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0152;AVGPOST=0.9989;RSQ=0.9695;ERATE=0.0003;THETA=0.0015;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186793136 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8786;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186793194 . ACT A 244 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.7182;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186793276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9749;ERATE=0.0002;THETA=0.0022;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186793505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186793553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9629;ERATE=0.0003;THETA=0.0017;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186793690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9813;ERATE=0.0002;THETA=0.0014;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186793731 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6966;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186793774 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.759;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9281;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186793936 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7139;ERATE=0.0002;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186793989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186794051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8004;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186794160 . AAT A 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186794163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8330;ERATE=0.0002;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186794269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6942;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186794284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7297;ERATE=0.0004;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186794350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0002;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186794482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186794496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186794506 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186794507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5244;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186794537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8481;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186794596 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0093;AVGPOST=0.9981;RSQ=0.9267;ERATE=0.0002;THETA=0.0013;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186794683 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186794739 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0330;AVGPOST=0.9978;RSQ=0.9776;ERATE=0.0003;THETA=0.0032;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 186794856 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186794867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8814;ERATE=0.0002;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186794868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9816;ERATE=0.0003;THETA=0.0010;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186794874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0002;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186794936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.718;LDAF=0.0204;AVGPOST=0.9928;RSQ=0.8555;ERATE=0.0005;THETA=0.0083;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 186794947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.667;LDAF=0.0195;AVGPOST=0.9862;RSQ=0.7136;ERATE=0.0022;THETA=0.0019;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186795007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.712;LDAF=0.0087;AVGPOST=0.9931;RSQ=0.6977;ERATE=0.0007;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186795330 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.949;LDAF=0.0402;AVGPOST=0.9959;RSQ=0.9647;ERATE=0.0004;THETA=0.0025;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 186795472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5060;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186795545 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8483;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186795585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0021;AVGPOST=0.9970;RSQ=0.4829;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186795733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.720;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8126;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186795801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7162;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186795816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8458;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186795927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0134;AVGPOST=0.9996;RSQ=0.9869;ERATE=0.0002;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186795933 . A AG 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7244;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186795962 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0270;AVGPOST=0.9995;RSQ=0.9918;ERATE=0.0002;THETA=0.0104;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 186796049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8507;ERATE=0.0003;THETA=0.0054;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186796117 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8345;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186796119 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9625;ERATE=0.0003;THETA=0.0022;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186796254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.881;LDAF=0.0121;AVGPOST=0.9968;RSQ=0.8976;ERATE=0.0003;THETA=0.0038;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186796339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0002;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186796450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8757;ERATE=0.0004;THETA=0.0032;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186796451 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.8151;ERATE=0.0004;THETA=0.0046;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186796662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6470;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186796847 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.874;BRSQ=0.724;LDAF=0.2669;AVGPOST=0.8314;RSQ=0.6769;ERATE=0.0267;THETA=0.0008;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 186796856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.466;LDAF=0.0240;AVGPOST=0.9777;RSQ=0.6541;ERATE=0.0020;THETA=0.0040;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 186796910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.419;LDAF=0.0054;AVGPOST=0.9922;RSQ=0.3368;ERATE=0.0009;THETA=0.0090;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186797000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.617;LDAF=0.0077;AVGPOST=0.9943;RSQ=0.7271;ERATE=0.0005;THETA=0.0107;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186797002 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.883;BRSQ=0.675;LDAF=0.1899;AVGPOST=0.8931;RSQ=0.7600;ERATE=0.0052;THETA=0.0063;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 186797016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.409;LDAF=0.0561;AVGPOST=0.9513;RSQ=0.6535;ERATE=0.0038;THETA=0.0108;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 186797023 . ATC A 215 PASS INDEL;BAVGPOST=0.889;BRSQ=0.567;LDAF=0.1419;AVGPOST=0.9120;RSQ=0.7495;ERATE=0.0015;THETA=0.0008;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 186797024 rs112174910 TCTC T 2931 PASS INDEL;BAVGPOST=0.889;BRSQ=0.576;LDAF=0.1400;AVGPOST=0.9200;RSQ=0.7678;ERATE=0.0007;THETA=0.0009;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 186797034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.757;LDAF=0.0246;AVGPOST=0.9862;RSQ=0.7682;ERATE=0.0010;THETA=0.0012;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 186797063 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0035;AVGPOST=0.9947;RSQ=0.3668;ERATE=0.0007;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186797090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.789;LDAF=0.1295;AVGPOST=0.9574;RSQ=0.8707;ERATE=0.0006;THETA=0.0014;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 186797091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.797;LDAF=0.1493;AVGPOST=0.9433;RSQ=0.8427;ERATE=0.0033;THETA=0.0056;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 186797096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.633;LDAF=0.0069;AVGPOST=0.9942;RSQ=0.6658;ERATE=0.0007;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186797129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5258;ERATE=0.0004;THETA=0.0057;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186797479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.861;LDAF=0.8963;AVGPOST=0.9806;RSQ=0.9226;ERATE=0.0007;THETA=0.0053;AC=1959;AN=2184 GT:DS:GL:BD 0.89697802 1
1 186797525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8514;ERATE=0.0005;THETA=0.0036;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186797560 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5582;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186797688 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0037;AVGPOST=0.9962;RSQ=0.5828;ERATE=0.0007;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186797704 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0063;AVGPOST=0.9963;RSQ=0.7817;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186797740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7885;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186797759 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4322;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186797880 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7321;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186797982 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186798045 rs12720484 AG A 4621 PASS INDEL;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0309;AVGPOST=0.9967;RSQ=0.9614;ERATE=0.0003;THETA=0.0022;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 186798054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0002;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186798128 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9654;ERATE=0.0003;THETA=0.0029;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186798153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186798196 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5836;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186798220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186798363 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186798705 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8651;ERATE=0.0003;THETA=0.0027;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186798764 . G GA 264 PASS INDEL;BAVGPOST=0.979;BRSQ=0.513;LDAF=0.0356;AVGPOST=0.9599;RSQ=0.5417;ERATE=0.0061;THETA=0.0034;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 186798856 . C CA 157 PASS INDEL;BAVGPOST=0.992;BRSQ=0.597;LDAF=0.0193;AVGPOST=0.9789;RSQ=0.5560;ERATE=0.0027;THETA=0.0014;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186798866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0066;AVGPOST=0.9983;RSQ=0.8992;ERATE=0.0004;THETA=0.0023;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186798867 rs12720486 G GA 2675 PASS INDEL;BAVGPOST=0.990;BRSQ=0.887;LDAF=0.0402;AVGPOST=0.9786;RSQ=0.7993;ERATE=0.0048;THETA=0.0040;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 186798901 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.3976;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186798917 . T TC 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5408;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186799051 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8599;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186799100 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0312;AVGPOST=0.9989;RSQ=0.9861;ERATE=0.0003;THETA=0.0016;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 186799228 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186799281 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186799555 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.668;LDAF=0.0060;AVGPOST=0.9960;RSQ=0.7454;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186799610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.978;LDAF=0.4611;AVGPOST=0.9517;RSQ=0.9317;ERATE=0.0007;THETA=0.0006;AC=1015;AN=2184 GT:DS:GL:BD 0.46474358 0
1 186799969 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4519;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186800088 rs71708416 TGC T 15988 PASS INDEL;BAVGPOST=0.855;BRSQ=0.601;LDAF=0.7700;AVGPOST=0.7930;RSQ=0.5488;ERATE=0.0309;THETA=0.0018;AC=1792;AN=2184 GT:DS:GL:BD 0.82051283 1
1 186800100 rs58362720 T TTC 149 PASS INDEL;BAVGPOST=0.992;BRSQ=0.418;LDAF=0.0068;AVGPOST=0.9904;RSQ=0.4368;ERATE=0.0007;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186800117 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.632;LDAF=0.0099;AVGPOST=0.9916;RSQ=0.6692;ERATE=0.0015;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186800121 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.645;LDAF=0.0060;AVGPOST=0.9924;RSQ=0.5232;ERATE=0.0011;THETA=0.0020;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186800395 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.622;LDAF=0.0032;AVGPOST=0.9975;RSQ=0.6557;ERATE=0.0005;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186800404 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.9795;AVGPOST=0.9929;RSQ=0.8651;ERATE=0.0005;THETA=0.0006;AC=2141;AN=2184 GT:DS:GL:BD 0.98031133 1
1 186800511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.690;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6507;ERATE=0.0006;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186800585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186800733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9284;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186800756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9590;ERATE=0.0002;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186800911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186800920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186800937 rs75543617 GAGAC G 1656 PASS INDEL;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0231;AVGPOST=0.9975;RSQ=0.9606;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 186801045 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9564;ERATE=0.0003;THETA=0.0052;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186801151 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5355;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186801222 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7350;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186801284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.721;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186801356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8735;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186801663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5029;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186801681 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186801733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9617;ERATE=0.0003;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186801887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0030;AVGPOST=0.9967;RSQ=0.5442;ERATE=0.0008;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186801888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8911;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186802047 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7317;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186802142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0136;AVGPOST=0.9992;RSQ=0.9725;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186802195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0002;THETA=0.0017;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186802221 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1013;AVGPOST=0.9974;RSQ=0.9914;ERATE=0.0003;THETA=0.0023;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 186802236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7443;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186802246 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186802264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9465;ERATE=0.0003;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186802341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9553;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186802433 rs112789331 AG A 1613 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0169;AVGPOST=0.9974;RSQ=0.9452;ERATE=0.0005;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 186802563 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5370;AVGPOST=0.9855;RSQ=0.9805;ERATE=0.0004;THETA=0.0008;AC=1175;AN=2184 GT:DS:GL:BD 0.53800368 1
1 186802586 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0818;AVGPOST=0.9981;RSQ=0.9912;ERATE=0.0003;THETA=0.0009;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 186802791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.977;LDAF=0.2678;AVGPOST=0.9795;RSQ=0.9636;ERATE=0.0013;THETA=0.0007;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 186802808 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7127;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186802840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6612;ERATE=0.0010;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186802847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7439;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186802911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0555;AVGPOST=0.9992;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 186802985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186803134 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8048;ERATE=0.0003;THETA=0.0068;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186803181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0566;AVGPOST=0.9991;RSQ=0.9932;ERATE=0.0003;THETA=0.0010;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 186803224 rs34429516 T TC 25484 PASS INDEL;BAVGPOST=0.971;BRSQ=0.956;LDAF=0.5096;AVGPOST=0.9730;RSQ=0.9671;ERATE=0.0003;THETA=0.0009;AC=1116;AN=2184 GT:DS:GL:BD 0.51098901 1
1 186803226 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.956;LDAF=0.5080;AVGPOST=0.9730;RSQ=0.9666;ERATE=0.0006;THETA=0.0003;AC=1112;AN=2184 GT:DS:GL:BD 0.50915754 1
1 186803226 . AT A 17863 PASS INDEL;BAVGPOST=0.971;BRSQ=0.957;LDAF=0.5091;AVGPOST=0.9723;RSQ=0.9661;ERATE=0.0004;THETA=0.0004;AC=1114;AN=2184 GT:DS:GL:BD 0.51007324 1
1 186803227 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.957;LDAF=0.5094;AVGPOST=0.9718;RSQ=0.9657;ERATE=0.0004;THETA=0.0010;AC=1115;AN=2184 GT:DS:GL:BD 0.51053113 1
1 186803294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6349;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186803300 . G GT 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3289;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186803504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7941;ERATE=0.0002;THETA=0.0081;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186803653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5081;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186803773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7976;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186803799 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186803853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0044;AVGPOST=0.9987;RSQ=0.8991;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186804060 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5402;AVGPOST=0.9872;RSQ=0.9830;ERATE=0.0004;THETA=0.0006;AC=1184;AN=2184 GT:DS:GL:BD 0.54212457 1
1 186804285 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9846;ERATE=0.0003;THETA=0.0034;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186804302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7877;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186804414 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0129;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0002;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186804607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9591;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186804782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=0.9997;RSQ=0.9752;ERATE=0.0002;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186804832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.871;LDAF=0.0275;AVGPOST=0.9934;RSQ=0.9100;ERATE=0.0003;THETA=0.0008;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 186804858 . GT G 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5367;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186804948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9494;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186805008 . GCTTA G 451 PASS INDEL;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0037;AVGPOST=0.9952;RSQ=0.4753;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186805073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9618;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186805189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0030;AVGPOST=0.9963;RSQ=0.5651;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186805283 . TA T 80 PASS INDEL;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0035;AVGPOST=0.9964;RSQ=0.5873;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186805285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186805384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0086;AVGPOST=0.9957;RSQ=0.8485;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186805411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0034;AVGPOST=0.9971;RSQ=0.6638;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186805473 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0247;AVGPOST=0.9981;RSQ=0.9689;ERATE=0.0006;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 186805474 . TA T 1051 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0248;AVGPOST=0.9982;RSQ=0.9726;ERATE=0.0003;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 186805556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8052;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186805701 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9137;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186805782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186805886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186805928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7676;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186805952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186806053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0582;AVGPOST=0.9973;RSQ=0.9811;ERATE=0.0003;THETA=0.0005;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 186806079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186806110 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0247;AVGPOST=0.9992;RSQ=0.9881;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 186806201 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7164;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186806345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0131;AVGPOST=0.9994;RSQ=0.9823;ERATE=0.0002;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186806454 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186806494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186806576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0117;AVGPOST=0.9986;RSQ=0.9550;ERATE=0.0002;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186806632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5170;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186806651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.5794;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186806654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.533;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5388;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186806666 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0029;AVGPOST=0.9955;RSQ=0.3688;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186806884 rs67987940 AG A 10592 PASS INDEL;BAVGPOST=0.941;BRSQ=0.905;LDAF=0.5151;AVGPOST=0.9070;RSQ=0.8732;ERATE=0.0117;THETA=0.0008;AC=1162;AN=2184 GT:DS:GL:BD 0.53205127 1
1 186806887 . A AAG 1458 PASS INDEL;BAVGPOST=0.994;BRSQ=0.916;LDAF=0.0277;AVGPOST=0.9947;RSQ=0.9378;ERATE=0.0007;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 186806950 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5843;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186807104 . T TG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4420;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186807179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7599;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186807265 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0640;ERATE=0.0002;THETA=0.0014;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186807274 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.793;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.9001;ERATE=0.0002;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186807545 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186807599 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186807696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.779;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8818;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186807697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186807754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186807799 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186807848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186807932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9643;ERATE=0.0002;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186807933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7969;ERATE=0.0004;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186807958 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9445;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186808149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5773;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186808196 rs12720489 T TA 38352 PASS INDEL;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.5312;AVGPOST=0.9841;RSQ=0.9768;ERATE=0.0018;THETA=0.0002;AC=1158;AN=2184 GT:DS:GL:BD 0.53021979 1
1 186808244 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186808280 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8939;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186808306 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6356;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186808312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186808343 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4285;AVGPOST=0.9927;RSQ=0.9893;ERATE=0.0005;THETA=0.0087;AC=936;AN=2184 GT:DS:GL:BD 0.42857143 0
1 186808397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6527;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186808572 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186808626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9846;ERATE=0.0002;THETA=0.0019;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186808665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0135;AVGPOST=0.9984;RSQ=0.9571;ERATE=0.0003;THETA=0.0026;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186808675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5782;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186808709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186808725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186808821 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186809062 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7357;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186809097 rs72230206 C CT 1013 PASS INDEL;BAVGPOST=0.483;BRSQ=0.104;LDAF=0.6098;AVGPOST=0.7074;RSQ=0.5086;ERATE=0.0063;THETA=0.0138;AC=1324;AN=2184 GT:DS:GL:BD 0.60622710 1
1 186809496 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5048;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186809577 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0221;AVGPOST=0.9968;RSQ=0.9454;ERATE=0.0003;THETA=0.0141;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 186809638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8229;ERATE=0.0006;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186809659 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5694;ERATE=0.0003;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186809703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0084;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186809793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9653;ERATE=0.0004;THETA=0.0084;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186809883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9106;ERATE=0.0003;THETA=0.0055;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186810023 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.715;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8818;ERATE=0.0003;THETA=0.0035;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186810033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0144;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186810054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8985;ERATE=0.0003;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186810279 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.962;LDAF=0.0797;AVGPOST=0.9893;RSQ=0.9420;ERATE=0.0004;THETA=0.0086;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 186810338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6334;ERATE=0.0002;THETA=0.0295;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186810343 . CA C 589 PASS INDEL;BAVGPOST=0.998;BRSQ=0.869;LDAF=0.0061;AVGPOST=0.9967;RSQ=0.7752;ERATE=0.0005;THETA=0.0196;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186810561 . T TG 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6200;ERATE=0.0003;THETA=0.0091;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186810565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.6592;ERATE=0.0002;THETA=0.0113;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186810588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4816;ERATE=0.0003;THETA=0.0198;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186810659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0202;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186810854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.0117;AVGPOST=0.9979;RSQ=0.9231;ERATE=0.0002;THETA=0.0078;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186810887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9172;ERATE=0.0003;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186811040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8562;ERATE=0.0003;THETA=0.0203;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186811069 . GC G 12468 PASS INDEL;BAVGPOST=0.901;BRSQ=0.840;LDAF=0.5357;AVGPOST=0.8991;RSQ=0.8719;ERATE=0.0065;THETA=0.0040;AC=1191;AN=2184 GT:DS:GL:BD 0.54532969 1
1 186811070 rs77511717 CG C 52340 PASS INDEL;BAVGPOST=0.926;BRSQ=0.890;LDAF=0.5783;AVGPOST=0.9315;RSQ=0.9128;ERATE=0.0011;THETA=0.0023;AC=1265;AN=2184 GT:DS:GL:BD 0.57921243 1
1 186811074 . GA G 6454 PASS INDEL;BAVGPOST=0.843;BRSQ=0.757;LDAF=0.4680;AVGPOST=0.8493;RSQ=0.7991;ERATE=0.0046;THETA=0.0206;AC=1055;AN=2184 GT:DS:GL:BD 0.48305860 0
1 186811128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0160;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186811267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.449;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4095;ERATE=0.0004;THETA=0.0293;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186811311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.911;LDAF=0.3875;AVGPOST=0.9470;RSQ=0.9291;ERATE=0.0013;THETA=0.0018;AC=848;AN=2184 GT:DS:GL:BD 0.38827839 0
1 186811383 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4461;ERATE=0.0002;THETA=0.0158;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186811471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4995;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186811506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186811539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0002;THETA=0.0064;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186811589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9224;ERATE=0.0004;THETA=0.0091;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186811609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0063;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186811670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0003;THETA=0.0124;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186811720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186811954 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0132;AVGPOST=0.9974;RSQ=0.9409;ERATE=0.0002;THETA=0.0105;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186811999 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0076;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186812056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186812277 . GT G 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7111;ERATE=0.0003;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186812285 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0105;AVGPOST=0.9996;RSQ=0.9843;ERATE=0.0003;THETA=0.0081;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186812354 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186812367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8317;AVGPOST=0.9879;RSQ=0.9670;ERATE=0.0005;THETA=0.0019;AC=1813;AN=2184 GT:DS:GL:BD 0.83012819 1
1 186812375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186812494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.7962;ERATE=0.0010;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186812505 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8819;ERATE=0.0005;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186812585 . TA T 490 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8371;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186812603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5953;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186812726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186812780 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6437;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186812901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186812960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0002;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186812992 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.949;LDAF=0.0411;AVGPOST=0.9959;RSQ=0.9567;ERATE=0.0003;THETA=0.0016;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 186813127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.945;LDAF=0.0375;AVGPOST=0.9964;RSQ=0.9640;ERATE=0.0002;THETA=0.0011;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 186813184 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8494;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186813217 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6758;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186813304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186813409 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5170;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186813412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7906;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186813441 . CT C 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6480;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186813517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7222;ERATE=0.0010;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186813622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.896;LDAF=0.0222;AVGPOST=0.9957;RSQ=0.9267;ERATE=0.0005;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 186813668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5736;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186813735 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0085;AVGPOST=0.9972;RSQ=0.8753;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186813746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.965;LDAF=0.7485;AVGPOST=0.9853;RSQ=0.9713;ERATE=0.0009;THETA=0.0008;AC=1637;AN=2184 GT:DS:GL:BD 0.74954212 1
1 186813793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8431;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186813809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0025;AVGPOST=0.9965;RSQ=0.4226;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186813824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3841;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186813854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186813882 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7685;ERATE=0.0010;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186813896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186813951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186814122 . ACT A 93 PASS INDEL;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0107;AVGPOST=0.9929;RSQ=0.7400;ERATE=0.0011;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186814123 . CTT C 21 PASS INDEL;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.0085;AVGPOST=0.9929;RSQ=0.6917;ERATE=0.0010;THETA=0.0017;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186814232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0105;AVGPOST=0.9997;RSQ=0.9857;ERATE=0.0002;THETA=0.0028;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186814235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7213;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186814345 . A AAAAC 584 PASS INDEL;BAVGPOST=0.997;BRSQ=0.790;LDAF=0.0069;AVGPOST=0.9947;RSQ=0.6892;ERATE=0.0006;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186814449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186814454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7577;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186814508 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8755;ERATE=0.0012;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186814526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186814557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6255;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186814568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6174;ERATE=0.0011;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186814569 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0766;AVGPOST=0.9990;RSQ=0.9954;ERATE=0.0004;THETA=0.0013;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 186814644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0053;AVGPOST=0.9963;RSQ=0.7316;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186814701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0772;AVGPOST=0.9978;RSQ=0.9906;ERATE=0.0004;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 186814763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6695;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186815058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8964;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186815285 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186815308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186815386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.9118;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186815630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186815705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0110;AVGPOST=0.9989;RSQ=0.9658;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186815725 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0111;AVGPOST=0.9996;RSQ=0.9863;ERATE=0.0003;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186815777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9983;RSQ=0.9516;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186815997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186816012 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7182;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186816033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.8284;AVGPOST=0.9921;RSQ=0.9794;ERATE=0.0006;THETA=0.0002;AC=1807;AN=2184 GT:DS:GL:BD 0.82738096 1
1 186816040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4523;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186816194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9985;RSQ=0.9499;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186816276 rs67500007 CTATTT C 82336 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7533;AVGPOST=0.9913;RSQ=0.9839;ERATE=0.0007;THETA=0.0006;AC=1647;AN=2184 GT:DS:GL:BD 0.75412089 1
1 186816295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6507;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186816387 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.870;LDAF=0.0121;AVGPOST=0.9969;RSQ=0.8989;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186816491 rs113391333 TG T 109 PASS INDEL;BAVGPOST=0.997;BRSQ=0.845;LDAF=0.0093;AVGPOST=0.9934;RSQ=0.7514;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186816493 rs113391333 TG T 62 PASS INDEL;BAVGPOST=0.997;BRSQ=0.848;LDAF=0.0060;AVGPOST=0.9965;RSQ=0.7971;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186816504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7212;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186816623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7212;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186816650 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7519;AVGPOST=0.9957;RSQ=0.9923;ERATE=0.0004;THETA=0.0006;AC=1641;AN=2184 GT:DS:GL:BD 0.75137365 1
1 186816694 . TAA T 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.6714;ERATE=0.0004;THETA=0.0027;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186816695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7374;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186816702 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.950;LDAF=0.0446;AVGPOST=0.9963;RSQ=0.9634;ERATE=0.0003;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 186816703 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186816720 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6259;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186816743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0048;AVGPOST=0.9991;RSQ=0.9162;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186816765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9841;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186816957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0072;AVGPOST=0.9989;RSQ=0.9467;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186817041 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3791;AVGPOST=0.9972;RSQ=0.9956;ERATE=0.0004;THETA=0.0010;AC=830;AN=2184 GT:DS:GL:BD 0.38003662 0
1 186817052 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6800;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186817119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8839;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186817165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8883;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186817167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186817178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0588;AVGPOST=0.9992;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 186817201 . G GT 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5680;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186817212 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186817286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186817457 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186817575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8722;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186817590 . GGA G 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5181;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186817628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186817636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8814;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186817642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186817649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.871;LDAF=0.0086;AVGPOST=0.9986;RSQ=0.9337;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186817658 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186817727 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7682;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186817866 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8228;ERATE=0.0008;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186817911 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0076;AVGPOST=0.9992;RSQ=0.9591;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186817928 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3796;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=830;AN=2184 GT:DS:GL:BD 0.38003662 0
1 186818187 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4967;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186818328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.895;LDAF=0.0141;AVGPOST=0.9973;RSQ=0.9148;ERATE=0.0005;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186818463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.876;LDAF=0.0131;AVGPOST=0.9962;RSQ=0.8800;ERATE=0.0005;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186818464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186818538 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7079;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186818690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186818698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0073;AVGPOST=0.9987;RSQ=0.9489;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186818706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0149;AVGPOST=0.9994;RSQ=0.9822;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186818734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186818821 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.6064;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186818833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186818838 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186818861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0011;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186818943 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0579;AVGPOST=0.9970;RSQ=0.9774;ERATE=0.0004;THETA=0.0004;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 186819166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9146;ERATE=0.0004;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186819174 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6689;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186819373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186819493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6519;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186819536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6333;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186819544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186819688 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9915;ERATE=0.0002;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186819693 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7537;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186819745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5235;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186819768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186819770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8211;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186819908 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8712;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186819914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9893;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186819942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5817;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186820031 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0084;AVGPOST=0.9982;RSQ=0.9206;ERATE=0.0009;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186820062 . TA T 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4723;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186820174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.4493;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186820306 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9467;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186820437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186820464 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0596;AVGPOST=0.9978;RSQ=0.9886;ERATE=0.0002;THETA=0.0005;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 186820492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0091;AVGPOST=0.9993;RSQ=0.9766;ERATE=0.0002;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186820517 rs35339490 GA G 19844 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1644;AVGPOST=0.9956;RSQ=0.9883;ERATE=0.0004;THETA=0.0002;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 186820683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8509;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186820689 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186820710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8694;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186820746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.806;LDAF=0.0094;AVGPOST=0.9952;RSQ=0.7998;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186820783 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8590;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186820844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5346;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186820949 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186820980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7338;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186821043 . ACT A 139 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6713;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186821078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186821101 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6340;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186821353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3771;AVGPOST=0.9974;RSQ=0.9962;ERATE=0.0003;THETA=0.0008;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 186821413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5031;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186821488 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7652;AVGPOST=0.9972;RSQ=0.9949;ERATE=0.0004;THETA=0.0003;AC=1668;AN=2184 GT:DS:GL:BD 0.76373625 1
1 186821572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186821611 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186821712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9995;RSQ=0.9877;ERATE=0.0003;THETA=0.0001;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186821831 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5621;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186821946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5661;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186821954 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5364;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186822107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0092;AVGPOST=0.9990;RSQ=0.9629;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186822147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2537;AVGPOST=0.9965;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 186822150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7564;AVGPOST=0.9974;RSQ=0.9948;ERATE=0.0004;THETA=0.0005;AC=1650;AN=2184 GT:DS:GL:BD 0.75549453 1
1 186822169 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0148;AVGPOST=0.9995;RSQ=0.9831;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186822305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186822370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5582;AVGPOST=0.9927;RSQ=0.9890;ERATE=0.0004;THETA=0.0007;AC=1217;AN=2184 GT:DS:GL:BD 0.55723441 1
1 186822386 . A AT 1574 PASS INDEL;BAVGPOST=0.910;BRSQ=0.750;LDAF=0.1900;AVGPOST=0.9639;RSQ=0.9220;ERATE=0.0011;THETA=0.0002;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 186822393 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8340;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186822393 rs74263879 TA T 497 PASS INDEL;BAVGPOST=0.935;BRSQ=0.439;LDAF=0.0846;AVGPOST=0.9170;RSQ=0.6132;ERATE=0.0068;THETA=0.0002;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 186822394 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.862;LDAF=0.2045;AVGPOST=0.9479;RSQ=0.8857;ERATE=0.0090;THETA=0.0002;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 186822569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7104;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186822745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1795;AVGPOST=0.9941;RSQ=0.9862;ERATE=0.0006;THETA=0.0004;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 186822750 . A AG 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0026;AVGPOST=0.9963;RSQ=0.4042;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186822779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4520;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186822964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0628;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0003;THETA=0.0026;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 186823114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9986;RSQ=0.9755;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186823244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0002;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186823284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2132;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 186823294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186823456 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9880;ERATE=0.0008;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186823460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186823484 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186823510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186823541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186823937 . TTAGA T 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.4358;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186823941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8066;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186823958 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2562;AVGPOST=0.9954;RSQ=0.9923;ERATE=0.0004;THETA=0.0004;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 186824046 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0105;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0002;THETA=0.0014;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186824113 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8318;AVGPOST=0.9984;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=1816;AN=2184 GT:DS:GL:BD 0.83150184 1
1 186824142 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6717;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186824380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7310;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186824394 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5356;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186824465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6078;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186824550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5037;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186824560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0146;AVGPOST=0.9997;RSQ=0.9934;ERATE=0.0002;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186824625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7401;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186824669 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7041;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186824719 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186824769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.8102;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186824774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.0228;AVGPOST=0.9983;RSQ=0.9700;ERATE=0.0002;THETA=0.0013;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 186824839 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3901;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0002;THETA=0.0035;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 186824947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186824987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186825035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5805;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186825044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7032;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186825127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6583;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186825266 . G GC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6526;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186825329 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6001;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186825337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7605;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186825340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186825425 rs57705488 GTA G 60232 PASS INDEL;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.8350;AVGPOST=0.9897;RSQ=0.9719;ERATE=0.0009;THETA=0.0005;AC=1824;AN=2184 GT:DS:GL:BD 0.83516484 1
1 186825444 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0038;AVGPOST=0.9985;RSQ=0.8488;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186825612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186825679 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.828;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8591;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186825716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0944;AVGPOST=0.9983;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 186825788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6854;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186825807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0145;AVGPOST=0.9993;RSQ=0.9791;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186825830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9829;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186825863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6102;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186825917 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0440;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 186826020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.753;LDAF=0.0067;AVGPOST=0.9961;RSQ=0.7693;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186826226 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.192;LDAF=0.0793;AVGPOST=0.8859;RSQ=0.3853;ERATE=0.0059;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 186826248 . TA T 141 PASS INDEL;BAVGPOST=0.805;BRSQ=0.081;LDAF=0.1720;AVGPOST=0.7705;RSQ=0.3402;ERATE=0.0164;THETA=0.0022;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 186826299 . A AT 585 PASS INDEL;BAVGPOST=0.472;BRSQ=0.110;LDAF=0.3404;AVGPOST=0.6824;RSQ=0.4391;ERATE=0.0145;THETA=0.0003;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 186826350 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.658;BRSQ=0.349;LDAF=0.5200;AVGPOST=0.7031;RSQ=0.4222;ERATE=0.1105;THETA=0.0003;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 186826361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.752;LDAF=0.8250;AVGPOST=0.9245;RSQ=0.8014;ERATE=0.0031;THETA=0.0002;AC=1812;AN=2184 GT:DS:GL:BD 0.82967031 1
1 186826400 . AAGG A 11 PASS INDEL;BAVGPOST=0.988;BRSQ=0.125;LDAF=0.0512;AVGPOST=0.9202;RSQ=0.3353;ERATE=0.0033;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 186826766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3782;AVGPOST=0.9926;RSQ=0.9890;ERATE=0.0006;THETA=0.0012;AC=828;AN=2184 GT:DS:GL:BD 0.37912089 0
1 186826785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8552;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186826844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.962;LDAF=0.7425;AVGPOST=0.9604;RSQ=0.9288;ERATE=0.0064;THETA=0.0005;AC=1636;AN=2184 GT:DS:GL:BD 0.74908423 1
1 186826905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7928;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186826925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0614;AVGPOST=0.9976;RSQ=0.9858;ERATE=0.0006;THETA=0.0005;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 186826929 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.5539;AVGPOST=0.9965;RSQ=0.9947;ERATE=0.0006;THETA=0.0003;AC=1211;AN=2184 GT:DS:GL:BD 0.55448717 1
1 186826964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8420;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186827022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0037;AVGPOST=0.9948;RSQ=0.4642;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186827276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7180;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186827421 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5513;AVGPOST=0.9955;RSQ=0.9933;ERATE=0.0009;THETA=0.0003;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 186827439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0098;AVGPOST=0.9968;RSQ=0.9058;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186827473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6141;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186827541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.868;LDAF=0.0130;AVGPOST=0.9994;RSQ=0.9806;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186827701 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6031;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186827732 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7321;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186827843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7593;AVGPOST=0.9902;RSQ=0.9805;ERATE=0.0017;THETA=0.0003;AC=1657;AN=2184 GT:DS:GL:BD 0.75869966 1
1 186827964 . GA G 161 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8475;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186828015 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0110;AVGPOST=0.9986;RSQ=0.9525;ERATE=0.0005;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186828024 . G GA 1020 PASS INDEL;BAVGPOST=0.995;BRSQ=0.862;LDAF=0.0170;AVGPOST=0.9937;RSQ=0.8633;ERATE=0.0015;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186828074 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.505;LDAF=0.0071;AVGPOST=0.9920;RSQ=0.5841;ERATE=0.0012;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186828083 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0043;AVGPOST=0.9952;RSQ=0.5268;ERATE=0.0013;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186828117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3790;AVGPOST=0.9970;RSQ=0.9950;ERATE=0.0007;THETA=0.0005;AC=829;AN=2184 GT:DS:GL:BD 0.37957877 0
1 186828294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186828307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186828541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0939;AVGPOST=0.9987;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 186828542 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5840;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186828880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6971;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186829074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8402;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=1835;AN=2184 GT:DS:GL:BD 0.84020144 1
1 186829086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6357;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186829097 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0080;AVGPOST=0.9947;RSQ=0.7536;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186829099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186829194 . ATTTC A 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186829252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4600;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186829282 . TATTA T 224 PASS INDEL;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7066;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186829301 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8566;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186829304 . TATTA T 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7108;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186829358 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0056;AVGPOST=0.9980;RSQ=0.8723;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186829452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8155;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186829557 rs35131542 C CA 114767 PASS INDEL;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.8345;AVGPOST=0.9827;RSQ=0.9554;ERATE=0.0042;THETA=0.0004;AC=1826;AN=2184 GT:DS:GL:BD 0.83608061 1
1 186829572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4288;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186829699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8858;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186829729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186829772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0132;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186829784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186829814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6889;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186829854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8452;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186829915 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186829985 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186830007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6352;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186830039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7941;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186830092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1508;AVGPOST=0.9969;RSQ=0.9901;ERATE=0.0005;THETA=0.0005;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 186830141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186830238 rs72118325 TCCGTC T 335 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8974;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186830310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8483;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186830377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186830420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1985;AVGPOST=0.9951;RSQ=0.9901;ERATE=0.0003;THETA=0.0003;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 186830444 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186830497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9298;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186830552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0439;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0002;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 186830564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.976;LDAF=0.8551;AVGPOST=0.9954;RSQ=0.9874;ERATE=0.0003;THETA=0.0003;AC=1869;AN=2184 GT:DS:GL:BD 0.85576922 1
1 186830591 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8800;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186830628 . TA T 448 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8506;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186830636 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8386;AVGPOST=0.9973;RSQ=0.9927;ERATE=0.0004;THETA=0.0004;AC=1832;AN=2184 GT:DS:GL:BD 0.83882785 1
1 186830649 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186831016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8423;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186831023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186831030 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8806;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186831037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8123;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186831060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.684;LDAF=0.0061;AVGPOST=0.9940;RSQ=0.6825;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186831073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8392;AVGPOST=0.9968;RSQ=0.9918;ERATE=0.0004;THETA=0.0005;AC=1834;AN=2184 GT:DS:GL:BD 0.83974361 1
1 186831115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0050;AVGPOST=0.9952;RSQ=0.6169;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186831129 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0068;AVGPOST=0.9918;RSQ=0.5105;ERATE=0.0013;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186831250 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4788;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186831298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4872;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186831395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0059;AVGPOST=0.9960;RSQ=0.7348;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186831422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.601;LDAF=0.0192;AVGPOST=0.9839;RSQ=0.6545;ERATE=0.0009;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186831439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0041;AVGPOST=0.9964;RSQ=0.6156;ERATE=0.0012;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186831503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8381;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186831513 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8408;AVGPOST=0.9968;RSQ=0.9896;ERATE=0.0005;THETA=0.0005;AC=1837;AN=2184 GT:DS:GL:BD 0.84111720 1
1 186831534 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.859;LDAF=0.0199;AVGPOST=0.9945;RSQ=0.8890;ERATE=0.0005;THETA=0.0001;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 186831557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7860;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186831629 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0038;AVGPOST=0.9967;RSQ=0.6348;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186831728 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7566;AVGPOST=0.9947;RSQ=0.9905;ERATE=0.0004;THETA=0.0003;AC=1652;AN=2184 GT:DS:GL:BD 0.75641024 1
1 186831869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.8056;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186832086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.908;LDAF=0.0173;AVGPOST=0.9965;RSQ=0.9177;ERATE=0.0002;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 186832173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8647;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186832304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8504;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186832308 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8684;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186832424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7648;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186832427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0443;AVGPOST=0.9988;RSQ=0.9886;ERATE=0.0004;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 186832562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7999;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186832621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0601;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0002;THETA=0.0005;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 186832637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9046;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186832891 rs34709541 T TA 53591 PASS INDEL;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.8353;AVGPOST=0.9902;RSQ=0.9733;ERATE=0.0013;THETA=0.0003;AC=1830;AN=2184 GT:DS:GL:BD 0.83791208 1
1 186832913 . G GGT 12886 PASS INDEL;BAVGPOST=0.863;BRSQ=0.740;LDAF=0.4966;AVGPOST=0.8085;RSQ=0.6986;ERATE=0.0726;THETA=0.0004;AC=1100;AN=2184 GT:DS:GL:BD 0.50366300 1
1 186832981 . C CA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.5893;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186832982 . TCCC T 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.5459;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186833049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6875;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186833078 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3975;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186833081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.739;LDAF=0.0060;AVGPOST=0.9964;RSQ=0.7450;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186833086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8374;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186833169 . A AT 130 PASS INDEL;BAVGPOST=0.963;BRSQ=0.381;LDAF=0.0610;AVGPOST=0.9172;RSQ=0.4151;ERATE=0.0158;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 186833172 rs57515431 A AT 99729 PASS INDEL;BAVGPOST=0.996;BRSQ=0.619;LDAF=0.9917;AVGPOST=0.9929;RSQ=0.6603;ERATE=0.0010;THETA=0.0002;AC=2170;AN=2184 GT:DS:GL:BD 0.99358976 1
1 186833277 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4580;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186833314 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6835;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186833335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7597;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186833460 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0054;AVGPOST=0.9987;RSQ=0.9079;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186833561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5858;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186833629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.973;LDAF=0.1484;AVGPOST=0.9956;RSQ=0.9865;ERATE=0.0007;THETA=0.0004;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 186833646 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8179;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186833677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186833681 . AAGTGATGTTG A 1093 PASS INDEL;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9054;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186833696 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.885;LDAF=0.0673;AVGPOST=0.9880;RSQ=0.9317;ERATE=0.0005;THETA=0.0002;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 186833790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.707;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7747;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186833810 . ATTGAG A 457 PASS INDEL;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6720;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186833856 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1613;AVGPOST=0.9953;RSQ=0.9854;ERATE=0.0007;THETA=0.0005;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 186834039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8353;AVGPOST=0.9952;RSQ=0.9861;ERATE=0.0006;THETA=0.0007;AC=1824;AN=2184 GT:DS:GL:BD 0.83516484 1
1 186834116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.618;LDAF=0.0058;AVGPOST=0.9935;RSQ=0.5419;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186834188 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0029;AVGPOST=0.9954;RSQ=0.3608;ERATE=0.0009;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186834237 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.904;LDAF=0.2044;AVGPOST=0.9796;RSQ=0.9525;ERATE=0.0011;THETA=0.0003;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 186834237 . T TAA 5309 PASS INDEL;BAVGPOST=0.905;BRSQ=0.814;LDAF=0.2929;AVGPOST=0.8791;RSQ=0.7906;ERATE=0.0106;THETA=0.0004;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 186834362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6892;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186834429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0605;AVGPOST=0.9985;RSQ=0.9909;ERATE=0.0003;THETA=0.0006;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 186834522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4160;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186834554 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5820;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186834591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4210;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186834673 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.889;LDAF=0.0318;AVGPOST=0.9931;RSQ=0.9178;ERATE=0.0005;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 186834678 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6673;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186834715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0089;AVGPOST=0.9977;RSQ=0.8831;ERATE=0.0017;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186834814 . A AT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4668;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186834818 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8656;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186834843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186834925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5535;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186834975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.7976;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186835008 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0048;AVGPOST=0.9966;RSQ=0.7350;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186835096 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8535;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186835098 . C CA 570 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0085;AVGPOST=0.9968;RSQ=0.8518;ERATE=0.0019;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186835123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7613;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186835137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5538;AVGPOST=0.9966;RSQ=0.9945;ERATE=0.0004;THETA=0.0032;AC=1209;AN=2184 GT:DS:GL:BD 0.55357140 1
1 186835173 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8374;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186835354 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6544;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186835469 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186835543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8364;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186835665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0097;AVGPOST=0.9987;RSQ=0.9488;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186835673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0596;AVGPOST=0.9983;RSQ=0.9913;ERATE=0.0004;THETA=0.0013;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 186835691 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.7969;ERATE=0.0004;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186835740 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8412;AVGPOST=0.9975;RSQ=0.9924;ERATE=0.0005;THETA=0.0005;AC=1838;AN=2184 GT:DS:GL:BD 0.84157509 1
1 186835747 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9981;RSQ=0.9488;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186835818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.8953;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186835995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8401;AVGPOST=0.9972;RSQ=0.9920;ERATE=0.0005;THETA=0.0002;AC=1835;AN=2184 GT:DS:GL:BD 0.84020144 1
1 186836006 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186836025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186836066 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.8393;AVGPOST=0.9981;RSQ=0.9942;ERATE=0.0004;THETA=0.0027;AC=1833;AN=2184 GT:DS:GL:BD 0.83928573 1
1 186836144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186836374 . A AT 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4872;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186836394 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8401;AVGPOST=0.9976;RSQ=0.9933;ERATE=0.0004;THETA=0.0004;AC=1836;AN=2184 GT:DS:GL:BD 0.84065932 1
1 186836434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8195;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186836461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6454;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186836468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7168;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186836553 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7313;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186836640 rs34920672 T TG 97399 PASS INDEL;BAVGPOST=0.984;BRSQ=0.950;LDAF=0.8367;AVGPOST=0.9900;RSQ=0.9736;ERATE=0.0013;THETA=0.0003;AC=1827;AN=2184 GT:DS:GL:BD 0.83653843 1
1 186836641 . G GT 31721 PASS INDEL;BAVGPOST=0.970;BRSQ=0.917;LDAF=0.8072;AVGPOST=0.9516;RSQ=0.8877;ERATE=0.0149;THETA=0.0007;AC=1781;AN=2184 GT:DS:GL:BD 0.81547618 1
1 186836721 . G GT 987 PASS INDEL;BAVGPOST=0.993;BRSQ=0.832;LDAF=0.0229;AVGPOST=0.9828;RSQ=0.7303;ERATE=0.0024;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 186836722 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8517;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186836837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186836844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7730;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186836856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5682;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186836889 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8411;AVGPOST=0.9975;RSQ=0.9934;ERATE=0.0003;THETA=0.0009;AC=1838;AN=2184 GT:DS:GL:BD 0.84157509 1
1 186836980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.6036;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186837027 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0589;AVGPOST=0.9974;RSQ=0.9870;ERATE=0.0003;THETA=0.0010;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 186837045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186837096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8801;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186837126 . T TTAAATTAA 413 PASS INDEL;BAVGPOST=0.999;BRSQ=0.522;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6333;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186837191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8386;AVGPOST=0.9972;RSQ=0.9916;ERATE=0.0006;THETA=0.0006;AC=1832;AN=2184 GT:DS:GL:BD 0.83882785 1
1 186837421 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.972;LDAF=0.7448;AVGPOST=0.9579;RSQ=0.9202;ERATE=0.0096;THETA=0.0005;AC=1640;AN=2184 GT:DS:GL:BD 0.75091577 1
1 186837456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7076;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186837463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0162;AVGPOST=0.9974;RSQ=0.9394;ERATE=0.0004;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 186837495 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.803;LDAF=0.0159;AVGPOST=0.9964;RSQ=0.9114;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186837511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8447;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186837512 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0045;AVGPOST=0.9978;RSQ=0.7969;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186837624 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186837640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8197;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186837685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9993;RSQ=0.9814;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186837754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8384;AVGPOST=0.9983;RSQ=0.9949;ERATE=0.0003;THETA=0.0008;AC=1831;AN=2184 GT:DS:GL:BD 0.83836997 1
1 186837865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.796;LDAF=0.0113;AVGPOST=0.9949;RSQ=0.8253;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186837877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2821;AVGPOST=0.9950;RSQ=0.9907;ERATE=0.0004;THETA=0.0007;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 186837894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9997;RSQ=0.9923;ERATE=0.0002;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186837929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186837992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.4894;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186838226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5025;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186838243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186838268 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8396;AVGPOST=0.9954;RSQ=0.9855;ERATE=0.0004;THETA=0.0005;AC=1834;AN=2184 GT:DS:GL:BD 0.83974361 1
1 186838310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186838333 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2028;AVGPOST=0.9933;RSQ=0.9848;ERATE=0.0004;THETA=0.0008;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 186838398 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8581;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186838432 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186838541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186838574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.0630;AVGPOST=0.9976;RSQ=0.9884;ERATE=0.0003;THETA=0.0031;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 186838575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7049;ERATE=0.0004;THETA=0.0127;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186838650 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7889;ERATE=0.0004;THETA=0.0093;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186838658 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5171;ERATE=0.0003;THETA=0.0108;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186838713 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8059;ERATE=0.0003;THETA=0.0082;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186838843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0084;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186838869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0002;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186838875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7380;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186839065 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186839104 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0002;THETA=0.0027;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186839133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186839199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0003;THETA=0.0065;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186839306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0130;AVGPOST=0.9994;RSQ=0.9819;ERATE=0.0003;THETA=0.0100;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186839339 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0317;AVGPOST=0.9978;RSQ=0.9726;ERATE=0.0003;THETA=0.0191;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 186839402 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9417;ERATE=0.0002;THETA=0.0145;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186839422 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0002;THETA=0.0074;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186839461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186839655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186839661 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.842;LDAF=0.0165;AVGPOST=0.9935;RSQ=0.8545;ERATE=0.0107;THETA=0.0017;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186839740 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8747;ERATE=0.0003;THETA=0.0111;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186839746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0081;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186839765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9709;ERATE=0.0002;THETA=0.0019;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186839788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0021;AVGPOST=0.9996;RSQ=0.9412;ERATE=0.0002;THETA=0.0166;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186839827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0122;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186839847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8499;ERATE=0.0002;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186839851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0060;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186839860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186839861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.1815;AVGPOST=0.9953;RSQ=0.9887;ERATE=0.0053;THETA=0.0080;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 186839878 . TAA T 3137 PASS INDEL;BAVGPOST=0.949;BRSQ=0.886;LDAF=0.2220;AVGPOST=0.9509;RSQ=0.9021;ERATE=0.0004;THETA=0.0014;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 186839879 rs12720508 AAG A 21341 PASS INDEL;BAVGPOST=0.954;BRSQ=0.902;LDAF=0.2314;AVGPOST=0.9554;RSQ=0.9148;ERATE=0.0034;THETA=0.0050;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 186839910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9664;ERATE=0.0003;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186839968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8493;ERATE=0.0005;THETA=0.0033;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186839971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0096;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186840018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.755;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6912;ERATE=0.0020;THETA=0.0112;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186840047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.7637;ERATE=0.0005;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186840149 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5249;ERATE=0.0004;THETA=0.0225;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186840285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186840298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.876;LDAF=0.0071;AVGPOST=0.9967;RSQ=0.8461;ERATE=0.0004;THETA=0.0091;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186840320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0004;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186840520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7011;ERATE=0.0002;THETA=0.0100;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186840688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186840711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186840988 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8253;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186841049 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0155;AVGPOST=0.9978;RSQ=0.9462;ERATE=0.0004;THETA=0.0040;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186841110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.9625;AVGPOST=0.9971;RSQ=0.9677;ERATE=0.0002;THETA=0.0019;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 186841115 . AG A 433 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8874;ERATE=0.0003;THETA=0.0052;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186841262 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9580;ERATE=0.0002;THETA=0.0033;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186841274 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9396;ERATE=0.0002;THETA=0.0026;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186841312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5219;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186841403 . TGAAA T 820 PASS INDEL;BAVGPOST=0.997;BRSQ=0.744;LDAF=0.0061;AVGPOST=0.9970;RSQ=0.8158;ERATE=0.0003;THETA=0.0037;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186841464 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5858;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186841486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4755;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186841580 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0688;AVGPOST=0.9963;RSQ=0.9798;ERATE=0.0003;THETA=0.0090;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 186841674 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0136;AVGPOST=0.9985;RSQ=0.9619;ERATE=0.0002;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186841743 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0138;AVGPOST=0.9992;RSQ=0.9786;ERATE=0.0003;THETA=0.0027;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186841801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0002;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186841866 . A AT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186841886 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.889;LDAF=0.0459;AVGPOST=0.9920;RSQ=0.9407;ERATE=0.0002;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 186841961 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2247;AVGPOST=0.9955;RSQ=0.9897;ERATE=0.0003;THETA=0.0006;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 186841971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.721;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8226;ERATE=0.0014;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186842034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9525;ERATE=0.0002;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186842054 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.876;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9726;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186842083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2053;AVGPOST=0.9961;RSQ=0.9928;ERATE=0.0003;THETA=0.0008;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 186842141 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9408;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186842186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8269;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186842255 rs59682543 AAT A 11919 PASS INDEL;BAVGPOST=0.992;BRSQ=0.974;LDAF=0.1478;AVGPOST=0.9899;RSQ=0.9703;ERATE=0.0004;THETA=0.0003;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 186842492 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.900;LDAF=0.0137;AVGPOST=0.9968;RSQ=0.9018;ERATE=0.0005;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186842559 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2248;AVGPOST=0.9948;RSQ=0.9887;ERATE=0.0005;THETA=0.0004;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 186842590 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186842638 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6173;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186842658 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.789;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9036;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186842664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2065;AVGPOST=0.9988;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186842709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0151;AVGPOST=0.9992;RSQ=0.9809;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186842715 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9600;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186842744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.649;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186842870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7970;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186842895 . A AG 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6452;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186842910 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2068;AVGPOST=0.9986;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186843233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7236;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186843244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186843251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5888;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186843275 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8564;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186843319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7911;ERATE=0.0020;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186843474 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8010;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186843510 . A AG 26504 PASS INDEL;BAVGPOST=0.958;BRSQ=0.740;LDAF=0.8968;AVGPOST=0.9247;RSQ=0.6901;ERATE=0.0258;THETA=0.0008;AC=2002;AN=2184 GT:DS:GL:BD 0.91666669 1
1 186843511 rs5779306 G GA 102828 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9606;AVGPOST=0.9971;RSQ=0.9759;ERATE=0.0003;THETA=0.0005;AC=2099;AN=2184 GT:DS:GL:BD 0.96108061 1
1 186843698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5958;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186843705 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186843804 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7565;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186843877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0288;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0002;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 186844251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7489;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186844278 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5341;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186844535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0039;AVGPOST=0.9968;RSQ=0.6627;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186844544 . TA T 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4190;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186844558 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0104;AVGPOST=0.9975;RSQ=0.9030;ERATE=0.0005;THETA=0.0048;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186844690 . TAC T 61 PASS INDEL;BAVGPOST=0.986;BRSQ=0.590;LDAF=0.0250;AVGPOST=0.9687;RSQ=0.5022;ERATE=0.0070;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 186844720 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6762;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186844799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0325;AVGPOST=0.9997;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 186844839 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5407;AVGPOST=0.9978;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 186844909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.523;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186844920 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186844926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5404;AVGPOST=0.9956;RSQ=0.9939;ERATE=0.0010;THETA=0.0005;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 186844931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0051;AVGPOST=0.9980;RSQ=0.8663;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186844957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2690;AVGPOST=0.9978;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 186844969 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186844997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186845129 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9232;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186845184 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186845191 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186845300 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186845323 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0036;AVGPOST=0.9987;RSQ=0.8533;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186845371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186845426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.6331;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186845431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0600;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0003;THETA=0.0002;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 186845468 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.948;LDAF=0.0360;AVGPOST=0.9959;RSQ=0.9526;ERATE=0.0003;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 186845547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.954;LDAF=0.0530;AVGPOST=0.9969;RSQ=0.9750;ERATE=0.0003;THETA=0.0006;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 186845628 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.869;LDAF=0.0129;AVGPOST=0.9988;RSQ=0.9609;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186845666 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0353;AVGPOST=0.9994;RSQ=0.9923;ERATE=0.0004;THETA=0.0006;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 186845738 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7329;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186845900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186845949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0073;AVGPOST=0.9980;RSQ=0.8961;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186846049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7672;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186846174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0681;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0002;THETA=0.0002;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 186846266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186846292 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6359;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186846332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.4891;AVGPOST=0.9954;RSQ=0.9945;ERATE=0.0004;THETA=0.0004;AC=1069;AN=2184 GT:DS:GL:BD 0.48946887 0
1 186846333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0304;AVGPOST=0.9966;RSQ=0.9618;ERATE=0.0002;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 186846482 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0291;AVGPOST=0.9994;RSQ=0.9914;ERATE=0.0003;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 186846512 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186846598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.2201;AVGPOST=0.9929;RSQ=0.9846;ERATE=0.0004;THETA=0.0008;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 186846702 . T TA 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7882;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186846727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186846823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0010;AVGPOST=0.9982;RSQ=0.3259;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186847255 . AT A 422 PASS INDEL;BAVGPOST=0.939;BRSQ=0.294;LDAF=0.1108;AVGPOST=0.8449;RSQ=0.3701;ERATE=0.0175;THETA=0.0007;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 186847294 . AT A 879 PASS INDEL;BAVGPOST=0.867;BRSQ=0.243;LDAF=0.1648;AVGPOST=0.7888;RSQ=0.3670;ERATE=0.0213;THETA=0.0004;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 186847333 rs10708783 AT A 378 PASS INDEL;BAVGPOST=0.876;BRSQ=0.149;LDAF=0.1494;AVGPOST=0.8065;RSQ=0.3912;ERATE=0.0119;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 186847341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.505;BRSQ=0.096;LDAF=0.4150;AVGPOST=0.6158;RSQ=0.2369;ERATE=0.0697;THETA=0.0003;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 186847354 . TA T 83 PASS INDEL;BAVGPOST=0.961;BRSQ=0.114;LDAF=0.0711;AVGPOST=0.9001;RSQ=0.4113;ERATE=0.0060;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 186847380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.675;BRSQ=0.266;LDAF=0.6717;AVGPOST=0.6715;RSQ=0.3318;ERATE=0.0436;THETA=0.0005;AC=1664;AN=2184 GT:DS:GL:BD 0.76190478 1
1 186847393 rs34606795 TA T 2465 PASS INDEL;BAVGPOST=0.737;BRSQ=0.145;LDAF=0.2703;AVGPOST=0.6792;RSQ=0.3000;ERATE=0.0357;THETA=0.0003;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 186847431 . AT A 88 PASS INDEL;BAVGPOST=0.962;BRSQ=0.202;LDAF=0.0766;AVGPOST=0.8859;RSQ=0.3827;ERATE=0.0088;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 186847482 rs10689140 A ATC 372 PASS INDEL;BAVGPOST=0.947;BRSQ=0.324;LDAF=0.1080;AVGPOST=0.8476;RSQ=0.3478;ERATE=0.0159;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 186847503 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.579;LDAF=0.0046;AVGPOST=0.9940;RSQ=0.3909;ERATE=0.0009;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186847574 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0548;AVGPOST=0.9962;RSQ=0.9688;ERATE=0.0004;THETA=0.0002;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 186847755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8296;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186848028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2070;AVGPOST=0.9962;RSQ=0.9929;ERATE=0.0003;THETA=0.0007;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 186848054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186848090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4332;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186848093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2074;AVGPOST=0.9980;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 186848148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0685;AVGPOST=0.9990;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 186848156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3800;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186848240 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0158;AVGPOST=0.9985;RSQ=0.9660;ERATE=0.0005;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186848356 . T TA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0036;AVGPOST=0.9957;RSQ=0.5711;ERATE=0.0004;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186848515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7361;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186848550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0297;AVGPOST=0.9995;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 186848587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186848828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8857;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186848863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0058;AVGPOST=0.9963;RSQ=0.7363;ERATE=0.0009;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186848957 . TTTTA T 324 PASS INDEL;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0092;AVGPOST=0.9931;RSQ=0.6814;ERATE=0.0007;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186848967 rs72346641 TTA T 11167 PASS INDEL;BAVGPOST=0.922;BRSQ=0.871;LDAF=0.5391;AVGPOST=0.8532;RSQ=0.7915;ERATE=0.0198;THETA=0.0004;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 186849084 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.4424;AVGPOST=0.9718;RSQ=0.9621;ERATE=0.0029;THETA=0.0003;AC=973;AN=2184 GT:DS:GL:BD 0.44551283 0
1 186849186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.957;LDAF=0.0672;AVGPOST=0.9948;RSQ=0.9706;ERATE=0.0002;THETA=0.0002;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 186849313 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0088;AVGPOST=0.9970;RSQ=0.8740;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186849317 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6243;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186849416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2036;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 186849584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8880;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186849611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0372;AVGPOST=0.9984;RSQ=0.9844;ERATE=0.0003;THETA=0.0002;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 186849860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9302;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186849861 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186850165 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0064;AVGPOST=0.9979;RSQ=0.8608;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186850207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5471;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186850248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0290;AVGPOST=0.9994;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 186850307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0682;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0001;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 186850379 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2389;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 186850387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186850522 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0321;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 186850570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0348;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0007;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 186850662 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8315;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186850668 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0321;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 186850676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186850680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8775;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186850681 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0115;AVGPOST=0.9989;RSQ=0.9594;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186850706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9913;ERATE=0.0002;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186850715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0682;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0002;THETA=0.0007;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 186850920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0690;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0002;THETA=0.0002;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 186850934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186850946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6548;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186850960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5868;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0003;THETA=0.0002;AC=1282;AN=2184 GT:DS:GL:BD 0.58699632 1
1 186851036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9611;AVGPOST=0.9992;RSQ=0.9912;ERATE=0.0002;THETA=0.0003;AC=2100;AN=2184 GT:DS:GL:BD 0.96153843 1
1 186851060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186851072 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9680;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186851157 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4140;AVGPOST=0.9972;RSQ=0.9962;ERATE=0.0006;THETA=0.0002;AC=903;AN=2184 GT:DS:GL:BD 0.41346154 0
1 186851216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3434;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 186851472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186851653 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0108;AVGPOST=0.9982;RSQ=0.9268;ERATE=0.0005;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186851697 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7287;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186851742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0076;AVGPOST=0.9984;RSQ=0.9234;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186851832 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5467;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186851887 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3416;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 186851915 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5548;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186851924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8135;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186852038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0682;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0002;THETA=0.0002;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 186852215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0316;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0002;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 186852232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186852252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.6008;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186852258 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6257;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186852283 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186852383 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0057;AVGPOST=0.9980;RSQ=0.8515;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186852454 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9620;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0002;THETA=0.0005;AC=2102;AN=2184 GT:DS:GL:BD 0.96245420 1
1 186852459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6283;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186852530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0061;AVGPOST=0.9981;RSQ=0.8787;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186852597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0771;AVGPOST=0.9994;RSQ=0.9964;ERATE=0.0003;THETA=0.0007;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 186852641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0610;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0002;THETA=0.0003;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 186852651 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0083;AVGPOST=0.9981;RSQ=0.9218;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186852661 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5898;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186852720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186852755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0092;AVGPOST=0.9985;RSQ=0.9319;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186852925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186852965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186853206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4177;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186853379 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.2072;AVGPOST=0.9964;RSQ=0.9925;ERATE=0.0004;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 186853517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0325;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 186853615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186853617 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7330;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186853655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.939;LDAF=0.0271;AVGPOST=0.9974;RSQ=0.9632;ERATE=0.0004;THETA=0.0013;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 186853735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186853860 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3527;AVGPOST=0.9976;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 186854072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0631;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 186854120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186854185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9032;ERATE=0.0007;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186854200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9321;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186854206 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186854222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186854249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7778;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186854406 . GAAAC G 76 PASS INDEL;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0119;AVGPOST=0.9865;RSQ=0.5679;ERATE=0.0037;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186854545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1592;AVGPOST=0.9978;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 186854609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8551;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186854963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186854965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2726;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 186855077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186855108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4853;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186855126 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0328;AVGPOST=0.9993;RSQ=0.9919;ERATE=0.0004;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 186855139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2298;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 186855176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186855206 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4166;AVGPOST=0.9967;RSQ=0.9949;ERATE=0.0004;THETA=0.0003;AC=911;AN=2184 GT:DS:GL:BD 0.41712454 0
1 186855295 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0123;AVGPOST=0.9971;RSQ=0.9179;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186855341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186855461 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6111;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186855538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186855555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2300;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0002;THETA=0.0006;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 186855640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0773;AVGPOST=0.9992;RSQ=0.9958;ERATE=0.0002;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 186855733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0051;AVGPOST=0.9992;RSQ=0.9295;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186855745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0121;AVGPOST=0.9977;RSQ=0.9239;ERATE=0.0004;THETA=0.0001;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186855977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6025;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186856003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0002;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186856037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186856138 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6657;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186856160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0289;AVGPOST=0.9995;RSQ=0.9914;ERATE=0.0003;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 186856163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9124;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186856167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0484;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0002;THETA=0.0003;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 186856168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186856228 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0772;AVGPOST=0.9992;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 186856248 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1610;AVGPOST=0.9973;RSQ=0.9919;ERATE=0.0004;THETA=0.0003;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 186856274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6707;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186856306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4723;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186856352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186856476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9255;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186856533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186856537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5119;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186856632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6366;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186856652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186856654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186856736 . CAT C 2570 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0141;AVGPOST=0.9987;RSQ=0.9604;ERATE=0.0002;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186856878 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8275;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186856885 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6919;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186856895 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8682;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186856947 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6151;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186857078 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5687;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186857114 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.4274;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186857232 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186857236 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3195;AVGPOST=0.9972;RSQ=0.9954;ERATE=0.0004;THETA=0.0028;AC=698;AN=2184 GT:DS:GL:BD 0.31959707 0
1 186857367 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186857388 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6171;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186857436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.7369;ERATE=0.0005;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186857492 rs34711478 TTC T 783 PASS INDEL;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0045;AVGPOST=0.9974;RSQ=0.7579;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186857498 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186857556 rs76737267 CCTT C 4621 PASS INDEL;BAVGPOST=0.988;BRSQ=0.813;LDAF=0.0254;AVGPOST=0.9927;RSQ=0.8948;ERATE=0.0004;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 186857646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.8276;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186857677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186857776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186857959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.5857;AVGPOST=0.9888;RSQ=0.9840;ERATE=0.0008;THETA=0.0050;AC=1283;AN=2184 GT:DS:GL:BD 0.58745420 1
1 186857990 . AG A 343 PASS INDEL;BAVGPOST=0.819;BRSQ=0.254;LDAF=0.1990;AVGPOST=0.7571;RSQ=0.3698;ERATE=0.0354;THETA=0.0009;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 186858048 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0637;AVGPOST=0.9978;RSQ=0.9870;ERATE=0.0002;THETA=0.0009;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 186858127 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0002;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186858135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.970;LDAF=0.1941;AVGPOST=0.9887;RSQ=0.9773;ERATE=0.0005;THETA=0.0281;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 186858165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.876;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9473;ERATE=0.0004;THETA=0.0059;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186858175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5890;ERATE=0.0003;THETA=0.0115;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186858239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7929;ERATE=0.0002;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186858265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0225;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186858364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0081;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186858497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.963;LDAF=0.4918;AVGPOST=0.9765;RSQ=0.9687;ERATE=0.0013;THETA=0.0014;AC=1070;AN=2184 GT:DS:GL:BD 0.48992673 0
1 186858498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.969;LDAF=0.2481;AVGPOST=0.9803;RSQ=0.9687;ERATE=0.0014;THETA=0.0160;AC=543;AN=2184 GT:DS:GL:BD 0.24862637 0
1 186858506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.957;LDAF=0.3288;AVGPOST=0.9744;RSQ=0.9598;ERATE=0.0045;THETA=0.0045;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 186858543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0003;AVGPOST=0.9997;RSQ=0.6564;ERATE=0.0002;THETA=0.0303;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186858770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6825;ERATE=0.0003;THETA=0.0090;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186858816 rs35412398 AT A 29522 PASS INDEL;BAVGPOST=0.933;BRSQ=0.895;LDAF=0.3928;AVGPOST=0.9356;RSQ=0.9117;ERATE=0.0048;THETA=0.0012;AC=850;AN=2184 GT:DS:GL:BD 0.38919413 0
1 186858823 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0047;AVGPOST=0.9967;RSQ=0.7308;ERATE=0.0010;THETA=0.0143;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186858823 . TG T 402 PASS INDEL;BAVGPOST=0.915;BRSQ=0.340;LDAF=0.0699;AVGPOST=0.9120;RSQ=0.5138;ERATE=0.0014;THETA=0.0161;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 186858905 rs10634937 A ACCT 146470 PASS INDEL;BAVGPOST=0.978;BRSQ=0.768;LDAF=0.9475;AVGPOST=0.9628;RSQ=0.7005;ERATE=0.0085;THETA=0.0099;AC=2099;AN=2184 GT:DS:GL:BD 0.96108061 1
1 186858920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.834;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8441;ERATE=0.0003;THETA=0.0035;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186858928 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8396;ERATE=0.0007;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186858929 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8596;ERATE=0.0003;THETA=0.0086;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186858939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5670;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186858997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6791;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186859035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0066;AVGPOST=0.9987;RSQ=0.9279;ERATE=0.0002;THETA=0.0145;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186859057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7206;ERATE=0.0002;THETA=0.0102;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186859165 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8973;ERATE=0.0004;THETA=0.0223;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186859200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0064;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186859291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0140;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186859319 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9642;ERATE=0.0002;THETA=0.0195;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186859330 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0375;AVGPOST=0.9973;RSQ=0.9719;ERATE=0.0004;THETA=0.0101;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 186859335 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9693;ERATE=0.0002;THETA=0.0053;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186859489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.966;LDAF=0.4017;AVGPOST=0.9751;RSQ=0.9636;ERATE=0.0017;THETA=0.0028;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 186859524 . T TA 476 PASS INDEL;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0079;AVGPOST=0.9971;RSQ=0.8494;ERATE=0.0003;THETA=0.0062;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186859544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5542;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186859649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186859672 . T TG 6917 PASS INDEL;BAVGPOST=0.977;BRSQ=0.968;LDAF=0.4198;AVGPOST=0.9619;RSQ=0.9479;ERATE=0.0007;THETA=0.0005;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 186859675 rs112458365 G GT 45276 PASS INDEL;BAVGPOST=0.979;BRSQ=0.969;LDAF=0.4233;AVGPOST=0.9678;RSQ=0.9557;ERATE=0.0003;THETA=0.0007;AC=924;AN=2184 GT:DS:GL:BD 0.42307693 0
1 186859746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7224;ERATE=0.0003;THETA=0.0074;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186859750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0368;AVGPOST=0.9968;RSQ=0.9676;ERATE=0.0002;THETA=0.0086;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 186859758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5764;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186859894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6702;ERATE=0.0005;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186859977 . C CT 69 PASS INDEL;BAVGPOST=0.997;BRSQ=0.614;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6392;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186860044 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186860236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.486;LDAF=0.0025;AVGPOST=0.9972;RSQ=0.5249;ERATE=0.0006;THETA=0.0040;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186860243 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.627;LDAF=0.0130;AVGPOST=0.9921;RSQ=0.7528;ERATE=0.0007;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186860243 . T TA 12958 PASS INDEL;BAVGPOST=0.983;BRSQ=0.669;LDAF=0.9672;AVGPOST=0.9701;RSQ=0.6675;ERATE=0.0022;THETA=0.0014;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 186860244 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.883;LDAF=0.0213;AVGPOST=0.9864;RSQ=0.7859;ERATE=0.0014;THETA=0.0027;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 186860420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4787;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186860539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186860744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8951;ERATE=0.0002;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186860799 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6852;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186860841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7176;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186860925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0084;AVGPOST=0.9991;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186860975 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186860980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6819;ERATE=0.0006;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186861224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6551;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186861237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186861238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4797;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186861392 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4450;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186861470 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186861521 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186861542 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0453;AVGPOST=0.9965;RSQ=0.9732;ERATE=0.0003;THETA=0.0007;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 186861616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186861759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0328;AVGPOST=0.9978;RSQ=0.9771;ERATE=0.0006;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 186861945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186862079 . TA T 729 PASS INDEL;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0062;AVGPOST=0.9970;RSQ=0.8484;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186862101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186862223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186862273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186862388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186862419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2335;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0010;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 186862512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3711;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0002;THETA=0.0002;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 186862557 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186862598 . AGTG A 56 PASS INDEL;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0068;AVGPOST=0.9947;RSQ=0.7117;ERATE=0.0006;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186862617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4314;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186862648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0080;AVGPOST=0.9987;RSQ=0.9337;ERATE=0.0002;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186862688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8070;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186862733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186862776 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7230;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186862806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.798;LDAF=0.0109;AVGPOST=0.9922;RSQ=0.7077;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186862932 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0317;AVGPOST=0.9984;RSQ=0.9780;ERATE=0.0003;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 186862989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.974;LDAF=0.3614;AVGPOST=0.9917;RSQ=0.9875;ERATE=0.0008;THETA=0.0013;AC=792;AN=2184 GT:DS:GL:BD 0.36263737 0
1 186863045 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0126;AVGPOST=0.9990;RSQ=0.9742;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186863239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186863287 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186863306 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186863320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186863385 rs80322371 TAA T 40465 PASS INDEL;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4114;AVGPOST=0.9865;RSQ=0.9805;ERATE=0.0011;THETA=0.0008;AC=894;AN=2184 GT:DS:GL:BD 0.40934065 0
1 186863521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9220;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186863565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0332;AVGPOST=0.9992;RSQ=0.9918;ERATE=0.0002;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 186863629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3868;AVGPOST=0.9975;RSQ=0.9962;ERATE=0.0006;THETA=0.0007;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 186863641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7307;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186863702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0333;AVGPOST=0.9989;RSQ=0.9875;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 186863705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186863818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0041;AVGPOST=0.9972;RSQ=0.7113;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186863949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5411;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186863956 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.969;LDAF=0.1746;AVGPOST=0.9912;RSQ=0.9806;ERATE=0.0005;THETA=0.0005;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 186864057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0126;AVGPOST=0.9981;RSQ=0.9505;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186864075 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186864079 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3706;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0003;THETA=0.0017;AC=811;AN=2184 GT:DS:GL:BD 0.37133700 0
1 186864127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6784;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186864294 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9115;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186864441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0148;AVGPOST=0.9992;RSQ=0.9772;ERATE=0.0002;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186864549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186864629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7111;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186864633 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8766;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186864842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8612;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186864926 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6903;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186864939 . CA C 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186865016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9707;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0012;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186865048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8461;ERATE=0.0002;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186865118 . AT A 40 PASS INDEL;BAVGPOST=0.998;BRSQ=0.402;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4341;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186865127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0029;AVGPOST=0.9962;RSQ=0.5247;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186865146 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7856;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186865331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6211;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186865347 . G GGCTT 282 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9966;RSQ=0.6648;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186865363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.696;LDAF=0.0034;AVGPOST=0.9969;RSQ=0.6355;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186865557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186865616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186865734 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8733;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186865815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9117;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186865818 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186865894 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6697;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186865899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.5155;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186866292 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9268;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186866387 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186866460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186866595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2357;AVGPOST=0.9926;RSQ=0.9872;ERATE=0.0012;THETA=0.0002;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 186866661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.806;LDAF=0.0557;AVGPOST=0.9872;RSQ=0.9033;ERATE=0.0004;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 186866734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9134;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186866788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.7828;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186866805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.680;LDAF=0.9354;AVGPOST=0.9460;RSQ=0.6620;ERATE=0.0063;THETA=0.0003;AC=2080;AN=2184 GT:DS:GL:BD 0.95238096 1
1 186866921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4410;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186866931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3721;AVGPOST=0.9930;RSQ=0.9891;ERATE=0.0004;THETA=0.0002;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 186867045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5919;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186867142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1390;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 186867146 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9373;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186867185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5186;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186867247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7851;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186867289 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3644;AVGPOST=0.9969;RSQ=0.9952;ERATE=0.0007;THETA=0.0001;AC=797;AN=2184 GT:DS:GL:BD 0.36492673 0
1 186867298 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.6598;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186867316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6511;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186867439 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0076;AVGPOST=0.9986;RSQ=0.9241;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186867463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.842;LDAF=0.0114;AVGPOST=0.9974;RSQ=0.9151;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186867539 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5486;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186867549 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2386;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 186867566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186867849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9159;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186867918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3890;AVGPOST=0.9959;RSQ=0.9942;ERATE=0.0007;THETA=0.0002;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 186867922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5360;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186867974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6042;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186868124 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2010;AVGPOST=0.9977;RSQ=0.9952;ERATE=0.0005;THETA=0.0004;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 186868431 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9277;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186868536 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9706;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0002;THETA=0.0003;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186868542 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9748;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186868561 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2326;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 186868691 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4840;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186868725 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0002;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186868740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2399;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 186868806 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186868832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0303;AVGPOST=0.9995;RSQ=0.9924;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 186868884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2332;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 186868937 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0072;AVGPOST=0.9990;RSQ=0.9409;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186869070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186869078 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186869150 rs12720539 G GC 49651 PASS INDEL;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3709;AVGPOST=0.9959;RSQ=0.9937;ERATE=0.0009;THETA=0.0005;AC=810;AN=2184 GT:DS:GL:BD 0.37087911 0
1 186869263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5550;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186869468 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9382;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186869651 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0062;AVGPOST=0.9989;RSQ=0.9364;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186869674 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9280;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186870072 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2379;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 186870135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186870165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9701;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186870220 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9707;AVGPOST=0.9996;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186870263 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3441;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 186870336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186870339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0097;AVGPOST=0.9983;RSQ=0.9331;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186870341 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7620;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186870385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.7386;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186870405 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.6029;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186870494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9040;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186870546 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2150;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0003;THETA=0.0006;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 186870729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9706;AVGPOST=0.9994;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186870752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0090;AVGPOST=0.9988;RSQ=0.9561;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186870964 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0442;AVGPOST=0.9985;RSQ=0.9874;ERATE=0.0003;THETA=0.0002;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 186870972 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5338;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186871025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2059;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 186871076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7293;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186871087 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9421;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186871129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7784;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186871193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9624;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186871221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8281;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186871242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186871270 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186871322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6204;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186871409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5765;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=1257;AN=2184 GT:DS:GL:BD 0.57554942 1
1 186871475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5816;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0005;THETA=0.0003;AC=1270;AN=2184 GT:DS:GL:BD 0.58150184 1
1 186871572 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1292;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 186871587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4552;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186871641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7213;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186871779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7732;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186871849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8500;ERATE=0.0002;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186871901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.651;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8652;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186871934 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9473;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186871941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.737;LDAF=0.0098;AVGPOST=0.9954;RSQ=0.8095;ERATE=0.0005;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186872201 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9629;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186872282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1535;AVGPOST=0.9979;RSQ=0.9942;ERATE=0.0003;THETA=0.0007;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 186872292 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7702;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186872307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1876;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 186872358 . CT C 309 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4400;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186872454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3706;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=810;AN=2184 GT:DS:GL:BD 0.37087911 0
1 186872706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0243;AVGPOST=0.9934;RSQ=0.8878;ERATE=0.0003;THETA=0.0001;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 186872714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1884;AVGPOST=0.9968;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 186872741 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.951;LDAF=0.0218;AVGPOST=0.9984;RSQ=0.9705;ERATE=0.0002;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 186872840 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5532;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186872846 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3728;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 186872985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1287;AVGPOST=0.9986;RSQ=0.9945;ERATE=0.0005;THETA=0.0006;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 186873188 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.836;LDAF=0.0170;AVGPOST=0.9926;RSQ=0.8282;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186873209 . CT C 244 PASS INDEL;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0053;AVGPOST=0.9947;RSQ=0.6125;ERATE=0.0006;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186873230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.923;LDAF=0.0619;AVGPOST=0.9899;RSQ=0.9409;ERATE=0.0004;THETA=0.0003;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 186873248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7825;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186873342 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.7038;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186873478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9144;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186873564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7038;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186873704 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5814;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0005;THETA=0.0004;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 186873802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186873925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0060;AVGPOST=0.9990;RSQ=0.9269;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186873978 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9703;AVGPOST=0.9991;RSQ=0.9862;ERATE=0.0004;THETA=0.0003;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186873980 . G GAT 9196 PASS INDEL;BAVGPOST=0.973;BRSQ=0.954;LDAF=0.5641;AVGPOST=0.9797;RSQ=0.9732;ERATE=0.0011;THETA=0.0003;AC=1229;AN=2184 GT:DS:GL:BD 0.56272894 1
1 186873994 . T TA 27807 PASS INDEL;BAVGPOST=0.959;BRSQ=0.928;LDAF=0.5076;AVGPOST=0.9454;RSQ=0.9229;ERATE=0.0121;THETA=0.0006;AC=1118;AN=2184 GT:DS:GL:BD 0.51190478 1
1 186874157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9605;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186874183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8263;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186874201 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.629;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.8994;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186874248 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.686;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8193;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186874314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3727;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 186874365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1290;AVGPOST=0.9991;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 186874409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186874461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5978;AVGPOST=0.9984;RSQ=0.9979;ERATE=0.0004;THETA=0.0002;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 186874477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186874775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186874891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0175;AVGPOST=0.9989;RSQ=0.9780;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 186875008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3725;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 186875148 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8938;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186875287 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186875319 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186875366 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9313;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186875459 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3722;AVGPOST=0.9974;RSQ=0.9961;ERATE=0.0007;THETA=0.0004;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 186875489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8881;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186875568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9548;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186875573 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186875657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.9012;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186875960 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186875981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8020;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186876010 . GCA G 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0064;AVGPOST=0.9962;RSQ=0.7353;ERATE=0.0006;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186876022 . TA T 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.644;LDAF=0.0058;AVGPOST=0.9932;RSQ=0.5651;ERATE=0.0008;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186876051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186876106 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186876203 . GA G 401 PASS INDEL;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0061;AVGPOST=0.9970;RSQ=0.7946;ERATE=0.0006;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186876305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9286;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186876361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9020;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186876396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8017;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186876464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186876503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9263;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186876601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4995;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186876612 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6677;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186876670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.847;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9538;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186876674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6863;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186876733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5503;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186876760 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8583;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186876807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186876847 . GT G 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0025;AVGPOST=0.9962;RSQ=0.4400;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186876921 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0052;AVGPOST=0.9986;RSQ=0.8925;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186877008 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186877119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0086;AVGPOST=0.9983;RSQ=0.9214;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186877211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.9480;AVGPOST=0.9970;RSQ=0.9710;ERATE=0.0006;THETA=0.0004;AC=2073;AN=2184 GT:DS:GL:BD 0.94917583 1
1 186877538 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186877620 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6586;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186877706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8147;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186877720 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0160;AVGPOST=0.9990;RSQ=0.9747;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 186877731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.6315;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186877733 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5387;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186877785 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1330;AVGPOST=0.9924;RSQ=0.9745;ERATE=0.0006;THETA=0.0006;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 186877872 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8555;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186877930 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2357;AVGPOST=0.9931;RSQ=0.9861;ERATE=0.0008;THETA=0.0006;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 186877953 . AATAT A 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4134;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186877983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.9626;AVGPOST=0.9964;RSQ=0.9606;ERATE=0.0005;THETA=0.0002;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 186878070 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0088;AVGPOST=0.9935;RSQ=0.7310;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186878090 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0090;AVGPOST=0.9941;RSQ=0.7076;ERATE=0.0009;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186878100 rs72020249 C CT 972 PASS INDEL;BAVGPOST=0.473;BRSQ=0.122;LDAF=0.4427;AVGPOST=0.6962;RSQ=0.5053;ERATE=0.0160;THETA=0.0006;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 186878150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.902;BRSQ=0.822;LDAF=0.5090;AVGPOST=0.8297;RSQ=0.7428;ERATE=0.0298;THETA=0.0006;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 186878327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.812;LDAF=0.0093;AVGPOST=0.9917;RSQ=0.5946;ERATE=0.0009;THETA=0.0029;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186878401 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0437;AVGPOST=0.9990;RSQ=0.9897;ERATE=0.0003;THETA=0.0006;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 186878451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6060;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186878494 . C CT 6861 PASS INDEL;BAVGPOST=0.920;BRSQ=0.860;LDAF=0.4960;AVGPOST=0.8479;RSQ=0.7838;ERATE=0.0425;THETA=0.0004;AC=1107;AN=2184 GT:DS:GL:BD 0.50686812 1
1 186878496 rs72503153 T TA 45412 PASS INDEL;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5887;AVGPOST=0.9826;RSQ=0.9751;ERATE=0.0037;THETA=0.0005;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 186878513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0033;AVGPOST=0.9961;RSQ=0.6025;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186878551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.858;LDAF=0.0074;AVGPOST=0.9988;RSQ=0.9284;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186878569 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.3933;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186878646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.718;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9421;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186878712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0069;AVGPOST=0.9987;RSQ=0.9136;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186878854 . T TC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4327;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186878964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186879043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1899;AVGPOST=0.9962;RSQ=0.9911;ERATE=0.0004;THETA=0.0003;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 186879071 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3695;AVGPOST=0.9964;RSQ=0.9945;ERATE=0.0006;THETA=0.0005;AC=811;AN=2184 GT:DS:GL:BD 0.37133700 0
1 186879085 . C CA 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0027;AVGPOST=0.9962;RSQ=0.4249;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186879178 . CAG C 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0036;AVGPOST=0.9952;RSQ=0.4307;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186879277 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5751;AVGPOST=0.9952;RSQ=0.9926;ERATE=0.0008;THETA=0.0004;AC=1257;AN=2184 GT:DS:GL:BD 0.57554942 1
1 186879291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9571;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186879329 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.7803;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186879465 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.869;LDAF=0.0132;AVGPOST=0.9983;RSQ=0.9530;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186879790 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7489;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186879891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5774;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0006;THETA=0.0002;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 186879986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186880045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186880521 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186880668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9302;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186880676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186880877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9324;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186880933 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.9151;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186880952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.3995;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186881072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8603;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186881233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186881324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0002;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 186881353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9149;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186881418 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8194;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186881468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0149;AVGPOST=0.9992;RSQ=0.9791;ERATE=0.0005;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186881500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186881522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7759;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186881615 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9710;AVGPOST=0.9990;RSQ=0.9844;ERATE=0.0003;THETA=0.0002;AC=2121;AN=2184 GT:DS:GL:BD 0.97115386 1
1 186881850 . ATATT A 552 PASS INDEL;BAVGPOST=0.993;BRSQ=0.761;LDAF=0.0185;AVGPOST=0.9957;RSQ=0.9014;ERATE=0.0006;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 186881881 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.887;LDAF=0.2412;AVGPOST=0.9266;RSQ=0.8598;ERATE=0.0074;THETA=0.0006;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 186881916 rs68042430 TTA T 3103 PASS INDEL;BAVGPOST=0.921;BRSQ=0.723;LDAF=0.2141;AVGPOST=0.8823;RSQ=0.7201;ERATE=0.0128;THETA=0.0002;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 186881940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.435;LDAF=0.0104;AVGPOST=0.9867;RSQ=0.5155;ERATE=0.0016;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186881941 . TAC T 71 PASS INDEL;BAVGPOST=0.980;BRSQ=0.406;LDAF=0.0449;AVGPOST=0.9405;RSQ=0.4612;ERATE=0.0048;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 186881964 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.449;LDAF=0.0114;AVGPOST=0.9883;RSQ=0.5931;ERATE=0.0009;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186882046 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0066;AVGPOST=0.9969;RSQ=0.7793;ERATE=0.0008;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186882073 . ATTAC A 96 PASS INDEL;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0089;AVGPOST=0.9907;RSQ=0.6091;ERATE=0.0008;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186882114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0063;AVGPOST=0.9974;RSQ=0.8110;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186882217 rs58829536 AT A 29420 PASS INDEL;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.5789;AVGPOST=0.9912;RSQ=0.9857;ERATE=0.0008;THETA=0.0033;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 186882285 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6755;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186882370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.567;LDAF=0.0042;AVGPOST=0.9968;RSQ=0.6803;ERATE=0.0011;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186882493 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0177;AVGPOST=0.9991;RSQ=0.9809;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 186882496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.947;LDAF=0.0223;AVGPOST=0.9961;RSQ=0.9283;ERATE=0.0005;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 186882649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0121;AVGPOST=0.9952;RSQ=0.8453;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186882686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186882712 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186882740 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5058;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186882793 rs35566402 CAT C 28876 PASS INDEL;BAVGPOST=0.642;BRSQ=0.269;LDAF=0.6631;AVGPOST=0.6823;RSQ=0.4204;ERATE=0.0391;THETA=0.0004;AC=1516;AN=2184 GT:DS:GL:BD 0.69413918 1
1 186882798 . ATG A 2898 PASS INDEL;BAVGPOST=0.975;BRSQ=0.930;LDAF=0.1849;AVGPOST=0.9787;RSQ=0.9512;ERATE=0.0009;THETA=0.0012;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 186882819 . CTT C 25 PASS INDEL;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7309;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186882820 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0436;AVGPOST=0.9989;RSQ=0.9882;ERATE=0.0004;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 186882834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.636;LDAF=0.0059;AVGPOST=0.9972;RSQ=0.7888;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186882879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0081;AVGPOST=0.9979;RSQ=0.9235;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186882979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6638;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186883072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5041;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186883140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9269;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186883201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0049;AVGPOST=0.9982;RSQ=0.8396;ERATE=0.0006;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186883245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0061;AVGPOST=0.9967;RSQ=0.7871;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186883285 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8918;ERATE=0.0002;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186883365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186883390 . T TTA 241 PASS INDEL;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0119;AVGPOST=0.9824;RSQ=0.4256;ERATE=0.0028;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186883402 rs57502674 G GT 67365 PASS INDEL;BAVGPOST=0.971;BRSQ=0.817;LDAF=0.9123;AVGPOST=0.9537;RSQ=0.7855;ERATE=0.0139;THETA=0.0004;AC=2011;AN=2184 GT:DS:GL:BD 0.92078757 1
1 186883597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1309;AVGPOST=0.9945;RSQ=0.9793;ERATE=0.0008;THETA=0.0004;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 186883702 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.788;LDAF=0.0330;AVGPOST=0.9891;RSQ=0.8756;ERATE=0.0003;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 186883809 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9996;RSQ=0.9790;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186883995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7909;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186884241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186884270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8622;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186884271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0085;AVGPOST=0.9993;RSQ=0.9585;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186884319 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.978;LDAF=0.5656;AVGPOST=0.9779;RSQ=0.9698;ERATE=0.0031;THETA=0.0024;AC=1238;AN=2184 GT:DS:GL:BD 0.56684983 1
1 186884479 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0024;AVGPOST=0.9972;RSQ=0.5952;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186884481 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7155;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186884743 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6862;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186884811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5871;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186885125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.2246;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186885137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.9984;AVGPOST=0.9976;RSQ=0.4339;ERATE=0.0003;THETA=0.0005;AC=2183;AN=2184 GT:DS:GL:BD 0.99954212 1
1 186885143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.788;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.7189;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186885165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186885190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186885264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0054;AVGPOST=0.9930;RSQ=0.5344;ERATE=0.0006;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186885306 rs60606724 TCTC T 26948 PASS INDEL;BAVGPOST=0.992;BRSQ=0.895;LDAF=0.9562;AVGPOST=0.9813;RSQ=0.8370;ERATE=0.0015;THETA=0.0003;AC=2103;AN=2184 GT:DS:GL:BD 0.96291208 1
1 186885313 . CTCG C 11997 PASS INDEL;BAVGPOST=0.898;BRSQ=0.453;LDAF=0.8482;AVGPOST=0.8174;RSQ=0.4622;ERATE=0.0155;THETA=0.0003;AC=1977;AN=2184 GT:DS:GL:BD 0.90521979 1
1 186885408 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9442;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186885626 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186885811 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186885868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.6976;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186885892 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1551;AVGPOST=0.9964;RSQ=0.9918;ERATE=0.0005;THETA=0.0006;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 186886133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.5676;AVGPOST=0.9888;RSQ=0.9830;ERATE=0.0008;THETA=0.0004;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 186886134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.2248;AVGPOST=0.9906;RSQ=0.9806;ERATE=0.0005;THETA=0.0003;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 186886177 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6796;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186886238 rs72503154 T TG 25531 PASS INDEL;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3300;AVGPOST=0.9865;RSQ=0.9792;ERATE=0.0017;THETA=0.0005;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 186886245 . G GT 85 PASS INDEL;BAVGPOST=0.994;BRSQ=0.663;LDAF=0.0098;AVGPOST=0.9928;RSQ=0.7078;ERATE=0.0021;THETA=0.0036;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186886381 . CA C 971 PASS INDEL;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0110;AVGPOST=0.9981;RSQ=0.9370;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186886479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9179;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186886501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186886655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0097;AVGPOST=0.9976;RSQ=0.9088;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186886666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186886823 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0054;AVGPOST=0.9981;RSQ=0.8782;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186887003 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6813;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186887065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5347;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186887066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0212;AVGPOST=0.9984;RSQ=0.9734;ERATE=0.0003;THETA=0.0036;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 186887106 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186887107 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1858;AVGPOST=0.9975;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 186887122 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0302;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0002;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 186887137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2079;AVGPOST=0.9975;RSQ=0.9947;ERATE=0.0005;THETA=0.0006;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 186887141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6549;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186887238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186887323 . CTGCTTT C 616 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9711;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186887415 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186887454 . TA T 23 PASS INDEL;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6887;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186887476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9079;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186887498 . CT C 2872 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0304;AVGPOST=0.9995;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 186887577 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0035;AVGPOST=0.9980;RSQ=0.7969;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186887667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7614;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186887731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6625;ERATE=0.0019;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186887762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8918;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186887964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0039;AVGPOST=0.9977;RSQ=0.7599;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186888010 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186888248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.3710;AVGPOST=0.9934;RSQ=0.9897;ERATE=0.0006;THETA=0.0013;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 186888337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0112;AVGPOST=0.9986;RSQ=0.9551;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186888436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0089;AVGPOST=0.9982;RSQ=0.9334;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186888480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0036;AVGPOST=0.9946;RSQ=0.5131;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186888512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3817;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186888617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5125;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186888845 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0102;AVGPOST=0.9980;RSQ=0.9230;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186888890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.843;LDAF=0.0088;AVGPOST=0.9966;RSQ=0.8455;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186888908 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0224;AVGPOST=0.9990;RSQ=0.9811;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 186888965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.850;LDAF=0.0241;AVGPOST=0.9947;RSQ=0.9050;ERATE=0.0006;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 186888966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.695;LDAF=0.0137;AVGPOST=0.9927;RSQ=0.8114;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186888983 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.5714;AVGPOST=0.9832;RSQ=0.9766;ERATE=0.0029;THETA=0.0006;AC=1253;AN=2184 GT:DS:GL:BD 0.57371795 1
1 186889047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186889077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7408;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186889104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3325;AVGPOST=0.9963;RSQ=0.9947;ERATE=0.0004;THETA=0.0005;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 186889131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0037;AVGPOST=0.9968;RSQ=0.6718;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186889168 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.696;LDAF=0.0047;AVGPOST=0.9961;RSQ=0.6679;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186889219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.9058;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186889312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.7023;ERATE=0.0002;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186889369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.972;LDAF=0.5554;AVGPOST=0.9724;RSQ=0.9604;ERATE=0.0065;THETA=0.0002;AC=1223;AN=2184 GT:DS:GL:BD 0.55998170 1
1 186889383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8209;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186889465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5899;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186889472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8101;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186889473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3713;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 186889550 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5779;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0005;THETA=0.0002;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 186889583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7740;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186889688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5753;AVGPOST=0.9946;RSQ=0.9920;ERATE=0.0008;THETA=0.0002;AC=1258;AN=2184 GT:DS:GL:BD 0.57600731 1
1 186889796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6001;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186889815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186889816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0114;AVGPOST=0.9970;RSQ=0.8904;ERATE=0.0004;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186889851 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6008;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186889864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6795;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186889873 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.808;LDAF=0.0205;AVGPOST=0.9907;RSQ=0.8481;ERATE=0.0006;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 186889885 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5738;AVGPOST=0.9928;RSQ=0.9897;ERATE=0.0011;THETA=0.0005;AC=1255;AN=2184 GT:DS:GL:BD 0.57463372 1
1 186889903 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4990;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186889912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186889951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4954;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186890016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5771;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0005;THETA=0.0003;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 186890062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186890063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9997;RSQ=0.0998;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186890134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5780;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186890141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186890170 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5782;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0005;THETA=0.0004;AC=1261;AN=2184 GT:DS:GL:BD 0.57738096 1
1 186890229 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5550;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186890400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9816;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186890420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5808;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186890469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186890486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0058;AVGPOST=0.9996;RSQ=0.9781;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186890531 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186890615 . G GTGTC 200 PASS INDEL;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186890701 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8997;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186890704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5779;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0004;THETA=0.0004;AC=1261;AN=2184 GT:DS:GL:BD 0.57738096 1
1 186890719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186890828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186890845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3368;AVGPOST=0.9924;RSQ=0.9886;ERATE=0.0009;THETA=0.0003;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 186890892 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5783;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=1261;AN=2184 GT:DS:GL:BD 0.57738096 1
1 186890907 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186890998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0019;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186891026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5751;AVGPOST=0.9963;RSQ=0.9941;ERATE=0.0008;THETA=0.0004;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 186891037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9533;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186891219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8921;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186891270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0427;AVGPOST=0.9988;RSQ=0.9885;ERATE=0.0003;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 186891305 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186891466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1857;AVGPOST=0.9973;RSQ=0.9936;ERATE=0.0005;THETA=0.0002;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 186891558 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0168;AVGPOST=0.9973;RSQ=0.9454;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186891571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0202;AVGPOST=0.9987;RSQ=0.9751;ERATE=0.0004;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 186891625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0064;AVGPOST=0.9987;RSQ=0.9072;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186891694 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0045;AVGPOST=0.9964;RSQ=0.7160;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186891987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9506;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186892008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7222;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186892013 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9991;AVGPOST=0.9985;RSQ=0.3720;ERATE=0.0002;THETA=0.0003;AC=2183;AN=2184 GT:DS:GL:BD 0.99954212 1
1 186892018 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9963;RSQ=0.6666;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186892025 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186892046 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9522;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186892071 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0042;AVGPOST=0.9966;RSQ=0.7055;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186892105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0115;AVGPOST=0.9987;RSQ=0.9652;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186892130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.8141;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186892528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5529;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186892708 . C CA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7397;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186892747 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9534;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186893001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0271;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0002;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 186893288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6873;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186893503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6491;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186893554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186893563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186893569 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186893592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186893736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9713;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0003;THETA=0.0006;AC=2121;AN=2184 GT:DS:GL:BD 0.97115386 1
1 186893845 . T TG 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7610;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186893846 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7147;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186893879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7076;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186893930 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1842;AVGPOST=0.9958;RSQ=0.9904;ERATE=0.0005;THETA=0.0005;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 186894027 . C CA 45 PASS INDEL;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6658;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186894051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6322;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186894081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2329;AVGPOST=0.9967;RSQ=0.9930;ERATE=0.0005;THETA=0.0002;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 186894172 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.6129;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186894229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.8162;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186894293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8997;ERATE=0.0004;THETA=0.0051;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186894318 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0047;AVGPOST=0.9974;RSQ=0.7860;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186894328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186894402 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3339;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 186894413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186894455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0238;AVGPOST=0.9998;RSQ=0.9965;ERATE=0.0002;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 186894487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9216;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186894497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186894770 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5309;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186894876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9360;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186894878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5060;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186894917 . T TA 334 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0038;AVGPOST=0.9983;RSQ=0.8366;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186894962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186895049 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8226;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186895086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186895177 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7202;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186895190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0160;AVGPOST=0.9990;RSQ=0.9749;ERATE=0.0002;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186895340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0202;AVGPOST=0.9996;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 186895548 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186895631 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0097;AVGPOST=0.9981;RSQ=0.9230;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186895850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2589;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 186895930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9421;ERATE=0.0003;THETA=0.0020;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186896025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7947;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186896082 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0071;AVGPOST=0.9970;RSQ=0.8615;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186896277 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.1123;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186896286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5799;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186896356 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0055;AVGPOST=0.9971;RSQ=0.7750;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186896387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.9136;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186896437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0206;AVGPOST=0.9970;RSQ=0.9435;ERATE=0.0003;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 186896479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0008;AVGPOST=0.9988;RSQ=0.4185;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186896603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2330;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0004;THETA=0.0002;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 186896676 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186896714 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7300;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186896774 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186896806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186896843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3785;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186896854 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186896894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0083;AVGPOST=0.9995;RSQ=0.9735;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186897102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3422;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 186897105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9292;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186897158 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186897238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2322;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0004;THETA=0.0004;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 186897315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9469;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186897379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9710;AVGPOST=0.9995;RSQ=0.9927;ERATE=0.0003;THETA=0.0002;AC=2121;AN=2184 GT:DS:GL:BD 0.97115386 1
1 186897427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8877;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186897435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0064;AVGPOST=0.9988;RSQ=0.9255;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186897625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9847;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186897651 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5952;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186897659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186897711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0160;AVGPOST=0.9990;RSQ=0.9740;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186898058 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186898065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3422;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0005;THETA=0.0006;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 186898084 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186898108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186898117 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5168;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186898170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5726;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186898341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186898458 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186898559 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9156;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186898708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3428;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0006;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 186898850 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186898995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.6625;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186899180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3434;AVGPOST=0.9979;RSQ=0.9971;ERATE=0.0003;THETA=0.0007;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 186899233 . A AAAAC 842 PASS INDEL;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0054;AVGPOST=0.9948;RSQ=0.6406;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186899253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6975;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186899295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186899385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3338;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0003;THETA=0.0009;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 186899413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7732;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186899466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186899503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3434;AVGPOST=0.9971;RSQ=0.9954;ERATE=0.0010;THETA=0.0002;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 186899655 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186899680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0102;AVGPOST=0.9981;RSQ=0.9293;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186899693 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1905;AVGPOST=0.9960;RSQ=0.9898;ERATE=0.0007;THETA=0.0004;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 186899698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9300;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186899726 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186899793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5656;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186899834 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0025;AVGPOST=0.9962;RSQ=0.5007;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186899876 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186899890 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6638;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186900041 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186900123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9377;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186900160 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8799;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186900198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3422;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0003;THETA=0.0007;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 186900353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6983;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186900389 . CAT C 257 PASS INDEL;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0061;AVGPOST=0.9965;RSQ=0.8072;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186900467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3489;AVGPOST=0.9971;RSQ=0.9953;ERATE=0.0010;THETA=0.0006;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 186900688 . TTAC T 224 PASS INDEL;BAVGPOST=0.931;BRSQ=0.441;LDAF=0.0908;AVGPOST=0.8940;RSQ=0.5015;ERATE=0.0138;THETA=0.0002;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 186900782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7845;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186901126 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9707;AVGPOST=0.9989;RSQ=0.9866;ERATE=0.0002;THETA=0.0004;AC=2121;AN=2184 GT:DS:GL:BD 0.97115386 1
1 186901171 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0078;AVGPOST=0.9989;RSQ=0.9438;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186901262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186901285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0003;AVGPOST=0.9996;RSQ=0.5697;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186901319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9328;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186901433 . T TC 118 PASS INDEL;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0061;AVGPOST=0.9940;RSQ=0.6453;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186901479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186901601 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6193;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186901653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.733;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8192;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186901664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.3315;AVGPOST=0.9907;RSQ=0.9865;ERATE=0.0005;THETA=0.0006;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 186901738 rs12720584 TTCTTCTTTTAAAA T 58696 PASS INDEL;BAVGPOST=0.961;BRSQ=0.933;LDAF=0.3596;AVGPOST=0.9704;RSQ=0.9557;ERATE=0.0052;THETA=0.0003;AC=792;AN=2184 GT:DS:GL:BD 0.36263737 0
1 186901781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186901852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0111;AVGPOST=0.9996;RSQ=0.9860;ERATE=0.0009;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186901856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186901912 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186902006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186902074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186902078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186902098 . TAGAAG T 176 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5836;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186902140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186902273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5650;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186902304 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5035;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186902313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3353;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 186902337 . TC T 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0053;AVGPOST=0.9938;RSQ=0.5780;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186902379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4003;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186902571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0033;AVGPOST=0.9973;RSQ=0.7039;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186902877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0086;AVGPOST=0.9990;RSQ=0.9596;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186903080 . T TA 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.585;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5012;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186903089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186903111 . CA C 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186903123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.7168;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186903134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186903216 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186903234 . T TG 18 PASS INDEL;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4739;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186903334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.5881;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186903789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9802;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186903791 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6410;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186903850 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.6615;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186903934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9737;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186903938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186903974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7214;ERATE=0.0002;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186904008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186904135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9324;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186904392 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.741;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8632;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186904433 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8105;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186904534 . G GT 51 PASS INDEL;BAVGPOST=0.996;BRSQ=0.579;LDAF=0.0130;AVGPOST=0.9813;RSQ=0.4578;ERATE=0.0035;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186904538 . TTA T 661 PASS INDEL;BAVGPOST=0.911;BRSQ=0.444;LDAF=0.1134;AVGPOST=0.8621;RSQ=0.4613;ERATE=0.0252;THETA=0.0004;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 186904574 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3625;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=793;AN=2184 GT:DS:GL:BD 0.36309522 0
1 186904592 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7879;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186904615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186904663 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186904683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0060;AVGPOST=0.9990;RSQ=0.9317;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186904796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186904955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9701;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186904971 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186904983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6825;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186905060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5257;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186905134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1878;AVGPOST=0.9988;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 186905141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0197;AVGPOST=0.9996;RSQ=0.9907;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 186905231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186905283 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0043;AVGPOST=0.9975;RSQ=0.7745;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186905315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3430;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 186905356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3435;AVGPOST=0.9968;RSQ=0.9954;ERATE=0.0005;THETA=0.0006;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 186905418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3428;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 186905523 . C CT 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6405;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186905768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186905799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6669;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186905821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3433;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0011;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 186905878 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3424;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 186905914 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5316;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186905935 rs11388924 T TC 1075 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0103;AVGPOST=0.9976;RSQ=0.8910;ERATE=0.0006;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186905963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.9700;AVGPOST=0.9985;RSQ=0.9759;ERATE=0.0004;THETA=0.0003;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186906038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186906076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7847;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186906143 rs67815329 T TG 19074 PASS INDEL;BAVGPOST=0.971;BRSQ=0.946;LDAF=0.3314;AVGPOST=0.9770;RSQ=0.9646;ERATE=0.0049;THETA=0.0002;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 186906150 . ATACTTT A 26344 PASS INDEL;BAVGPOST=0.971;BRSQ=0.946;LDAF=0.3305;AVGPOST=0.9885;RSQ=0.9816;ERATE=0.0014;THETA=0.0008;AC=727;AN=2184 GT:DS:GL:BD 0.33287546 0
1 186906286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5162;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186906309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1269;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 186906333 . TG T 606 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9985;RSQ=0.9212;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186906382 . GAA G 10329 PASS INDEL;BAVGPOST=0.917;BRSQ=0.844;LDAF=0.3293;AVGPOST=0.9229;RSQ=0.8816;ERATE=0.0108;THETA=0.0001;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 186906545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3430;AVGPOST=0.9975;RSQ=0.9963;ERATE=0.0005;THETA=0.0004;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 186906567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.942;LDAF=0.0484;AVGPOST=0.9962;RSQ=0.9690;ERATE=0.0003;THETA=0.0006;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 186906582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2311;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0005;THETA=0.0004;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 186906600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186906636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186906686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3429;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 186906872 rs66807128 AT A 47306 PASS INDEL;BAVGPOST=0.996;BRSQ=0.935;LDAF=0.9654;AVGPOST=0.9933;RSQ=0.9206;ERATE=0.0009;THETA=0.0003;AC=2114;AN=2184 GT:DS:GL:BD 0.96794873 1
1 186906912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0132;AVGPOST=0.9992;RSQ=0.9752;ERATE=0.0002;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186906916 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6294;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186906937 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5296;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186906947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0437;AVGPOST=0.9984;RSQ=0.9847;ERATE=0.0005;THETA=0.0003;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 186907002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.536;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6687;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186907046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1878;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 186907153 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0187;AVGPOST=0.9973;RSQ=0.9555;ERATE=0.0005;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 186907311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.694;LDAF=0.0170;AVGPOST=0.9825;RSQ=0.6343;ERATE=0.0047;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186907358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186907375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7451;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186907396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4700;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186907414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3681;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186907432 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9692;AVGPOST=0.9965;RSQ=0.9584;ERATE=0.0004;THETA=0.0006;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 186907520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3428;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0004;THETA=0.0002;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 186907580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186907662 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9524;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186907692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186907751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186907854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.9005;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186907910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7634;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186907915 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3428;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0004;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 186907936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9271;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186907965 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186907968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8499;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186907978 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186908015 . CA C 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186908120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186908192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186908219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186908350 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186908366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7220;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186908385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3428;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 186908393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9821;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186908407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8601;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186908495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3439;AVGPOST=0.9975;RSQ=0.9964;ERATE=0.0007;THETA=0.0002;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 186908632 rs79003114 A AC 104 PASS INDEL;BAVGPOST=0.999;BRSQ=0.560;LDAF=0.0046;AVGPOST=0.9941;RSQ=0.5268;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186908691 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.870;LDAF=0.0098;AVGPOST=0.9969;RSQ=0.8870;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186908743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2307;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 186908814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9928;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186908851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2308;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 186909042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186909074 . TA T 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4411;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186909090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0002;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186909348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186909374 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6800;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186909384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186909568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3345;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0010;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 186909790 . AGTT A 253 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5276;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186909862 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186909903 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9713;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186909918 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5429;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186910021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9997;RSQ=0.9790;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186910069 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186910117 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2306;AVGPOST=0.9986;RSQ=0.9969;ERATE=0.0004;THETA=0.0002;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 186910167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0210;AVGPOST=0.9970;RSQ=0.9426;ERATE=0.0004;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 186910231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186910293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186910419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.1873;AVGPOST=0.9988;RSQ=0.9968;ERATE=0.0005;THETA=0.0004;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 186910452 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9792;ERATE=0.0003;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186910529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186910540 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2311;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0005;THETA=0.0002;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 186910591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5739;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=1251;AN=2184 GT:DS:GL:BD 0.57280219 1
1 186910602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186910638 . GA G 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0061;AVGPOST=0.9934;RSQ=0.6278;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186910839 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9986;RSQ=0.9006;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186910889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3344;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 186911054 . GTT G 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6809;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186911080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3425;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 186911232 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186911453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3431;AVGPOST=0.9982;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 186911500 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186911542 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5107;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186911545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186911761 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0087;AVGPOST=0.9982;RSQ=0.9049;ERATE=0.0005;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186911831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7944;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186911869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186911880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.6282;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186911958 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5305;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186911987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3421;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 186911992 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186912014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5782;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186912016 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3429;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0007;THETA=0.0003;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 186912078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0133;AVGPOST=0.9991;RSQ=0.9687;ERATE=0.0005;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186912142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3429;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 186912198 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1264;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 186912212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.1895;AVGPOST=0.9957;RSQ=0.9898;ERATE=0.0007;THETA=0.0002;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 186912387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8944;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186912453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2308;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 186912479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3431;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0006;THETA=0.0002;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 186912508 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0097;AVGPOST=0.9996;RSQ=0.9801;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186912534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5678;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186912546 . T TTTTGACAGA 483 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4178;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186912622 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6489;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186912695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3425;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0005;THETA=0.0003;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 186912726 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7865;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186912743 . T TA 19 PASS INDEL;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6214;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186912752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8242;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186912924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.9034;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186912965 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0098;AVGPOST=0.9991;RSQ=0.9615;ERATE=0.0002;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186913055 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7135;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0006;THETA=0.0006;AC=1562;AN=2184 GT:DS:GL:BD 0.71520144 1
1 186913067 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0054;AVGPOST=0.9975;RSQ=0.8462;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186913192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0002;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186913263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3713;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 186913348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186913454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186913499 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0159;AVGPOST=0.9994;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186913589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6211;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186913683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9377;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186913776 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.7905;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186913827 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6099;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0006;THETA=0.0002;AC=1331;AN=2184 GT:DS:GL:BD 0.60943222 1
1 186913829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8082;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186913940 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.9692;AVGPOST=0.9969;RSQ=0.9616;ERATE=0.0006;THETA=0.0012;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186914002 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6100;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0007;AC=1331;AN=2184 GT:DS:GL:BD 0.60943222 1
1 186914023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3349;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 186914102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1581;AVGPOST=0.9960;RSQ=0.9904;ERATE=0.0005;THETA=0.0003;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 186914201 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9705;AVGPOST=0.9995;RSQ=0.9924;ERATE=0.0004;THETA=0.0003;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186914272 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186914316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1266;AVGPOST=0.9991;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 186914427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9430;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186914486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0266;AVGPOST=0.9996;RSQ=0.9926;ERATE=0.0003;THETA=0.0008;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 186914548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186914653 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186914666 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186914729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186914835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0430;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0004;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 186914844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8405;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186915022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6151;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186915064 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9067;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186915131 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0197;AVGPOST=0.9987;RSQ=0.9736;ERATE=0.0002;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 186915140 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3716;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 186915177 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.942;LDAF=0.1782;AVGPOST=0.9860;RSQ=0.9696;ERATE=0.0003;THETA=0.0020;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 186915278 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9474;ERATE=0.0005;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186915417 . T TG 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.479;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5438;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186915463 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9475;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186915464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9700;AVGPOST=0.9986;RSQ=0.9862;ERATE=0.0003;THETA=0.0004;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 186915584 . C CG 10069 PASS INDEL;BAVGPOST=0.865;BRSQ=0.762;LDAF=0.5056;AVGPOST=0.8309;RSQ=0.7464;ERATE=0.0398;THETA=0.0002;AC=1158;AN=2184 GT:DS:GL:BD 0.53021979 1
1 186915590 . T TC 8739 PASS INDEL;BAVGPOST=0.864;BRSQ=0.763;LDAF=0.4991;AVGPOST=0.8074;RSQ=0.7231;ERATE=0.0358;THETA=0.0003;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 186915663 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.935;LDAF=0.8861;AVGPOST=0.9550;RSQ=0.8426;ERATE=0.0226;THETA=0.0001;AC=1937;AN=2184 GT:DS:GL:BD 0.88690478 1
1 186915664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.935;LDAF=0.8670;AVGPOST=0.9670;RSQ=0.8901;ERATE=0.0401;THETA=0.0004;AC=1895;AN=2184 GT:DS:GL:BD 0.86767399 1
1 186915684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186915694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186915712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186915988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186916087 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186916104 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186916107 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186916115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186916159 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186916204 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9692;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186916248 . AAT A 283 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4603;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186916406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9429;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186916575 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.731;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8698;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186916608 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0263;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 186916631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8627;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186916746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5528;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0005;THETA=0.0004;AC=1210;AN=2184 GT:DS:GL:BD 0.55402929 1
1 186916767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3345;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0006;THETA=0.0003;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 186916825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9249;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186916949 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 186916987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9288;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186917463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7131;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186917520 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7421;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=1623;AN=2184 GT:DS:GL:BD 0.74313188 1
1 186917572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9705;AVGPOST=0.9994;RSQ=0.9898;ERATE=0.0003;THETA=0.0004;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186917598 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186917660 rs10596911 AAAG A 781 PASS INDEL;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0099;AVGPOST=0.9973;RSQ=0.8843;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186917951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=0.9997;RSQ=0.9744;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186917954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5291;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186917987 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2311;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 186918081 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8905;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186918311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7398;AVGPOST=0.9977;RSQ=0.9954;ERATE=0.0006;THETA=0.0003;AC=1619;AN=2184 GT:DS:GL:BD 0.74130034 1
1 186918316 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7413;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0003;THETA=0.0008;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 186918429 . AAAAG A 101 PASS INDEL;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0045;AVGPOST=0.9945;RSQ=0.5051;ERATE=0.0008;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186918433 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.970;LDAF=0.3671;AVGPOST=0.9886;RSQ=0.9831;ERATE=0.0018;THETA=0.0003;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 186918458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.876;LDAF=0.0141;AVGPOST=0.9970;RSQ=0.9164;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186918465 . A AAG 36 PASS INDEL;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0073;AVGPOST=0.9988;RSQ=0.9222;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186918556 rs68101595 TAGAA T 34426 PASS INDEL;BAVGPOST=0.982;BRSQ=0.970;LDAF=0.3678;AVGPOST=0.9854;RSQ=0.9795;ERATE=0.0013;THETA=0.0003;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 186918635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186918804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0103;AVGPOST=0.9959;RSQ=0.8697;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186918814 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8224;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186918975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8214;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186919034 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0090;AVGPOST=0.9979;RSQ=0.9094;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186919062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9697;AVGPOST=0.9979;RSQ=0.9713;ERATE=0.0004;THETA=0.0005;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186919068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.771;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186919079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.1807;AVGPOST=0.9915;RSQ=0.9804;ERATE=0.0003;THETA=0.0003;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 186919080 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9705;AVGPOST=0.9994;RSQ=0.9904;ERATE=0.0003;THETA=0.0005;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186919099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0047;AVGPOST=0.9957;RSQ=0.6348;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186919161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7397;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186919176 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.861;LDAF=0.0387;AVGPOST=0.9852;RSQ=0.8579;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 186919239 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3337;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0004;THETA=0.0007;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 186919251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186919381 . CTGTT C 1034 PASS INDEL;BAVGPOST=0.996;BRSQ=0.707;LDAF=0.0079;AVGPOST=0.9956;RSQ=0.7589;ERATE=0.0010;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186919383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.774;LDAF=0.0066;AVGPOST=0.9986;RSQ=0.9054;ERATE=0.0006;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186919414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186919434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9380;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186919634 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1883;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 186919675 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1267;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0002;THETA=0.0002;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 186919692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186919732 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9707;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186919765 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186919832 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186919863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0302;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 186919967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0002;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 186919993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9707;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0002;THETA=0.0004;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186920101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186920105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186920114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1265;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0002;THETA=0.0004;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 186920126 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7186;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186920192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9706;AVGPOST=0.9996;RSQ=0.9940;ERATE=0.0002;THETA=0.0003;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186920259 rs12720644 TA T 5372 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0262;AVGPOST=0.9997;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 186920389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9707;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0002;THETA=0.0003;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186920409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186920647 . C CT 126 PASS INDEL;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4680;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186920680 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4701;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186920888 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186920931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5428;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186920966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8804;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186920995 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9704;AVGPOST=0.9993;RSQ=0.9890;ERATE=0.0003;THETA=0.0003;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186921031 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9748;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186921044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2306;AVGPOST=0.9965;RSQ=0.9925;ERATE=0.0004;THETA=0.0002;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 186921177 . T TTA 26 PASS INDEL;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6168;ERATE=0.0004;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186921236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9705;AVGPOST=0.9995;RSQ=0.9924;ERATE=0.0004;THETA=0.0002;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186921315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9966;ERATE=0.0002;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 186921363 . CA C 369 PASS INDEL;BAVGPOST=0.992;BRSQ=0.403;LDAF=0.0047;AVGPOST=0.9958;RSQ=0.6467;ERATE=0.0008;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186921437 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9422;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186921476 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9707;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0012;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186921502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5003;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186921538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6561;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186921554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.3173;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186921667 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9700;AVGPOST=0.9994;RSQ=0.9901;ERATE=0.0003;THETA=0.0002;AC=2119;AN=2184 GT:DS:GL:BD 0.97023809 1
1 186921699 . ATCAG A 576 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9560;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186921738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9503;AVGPOST=0.9994;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=2076;AN=2184 GT:DS:GL:BD 0.95054942 1
1 186921773 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5354;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186921838 . G GC 18153 PASS INDEL;BAVGPOST=0.993;BRSQ=0.930;LDAF=0.9484;AVGPOST=0.9670;RSQ=0.7383;ERATE=0.0035;THETA=0.0013;AC=2091;AN=2184 GT:DS:GL:BD 0.95741761 1
1 186921943 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0114;AVGPOST=0.9967;RSQ=0.8740;ERATE=0.0006;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186921989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.9706;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186921994 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0067;AVGPOST=0.9984;RSQ=0.9104;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186922177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9692;AVGPOST=0.9979;RSQ=0.9700;ERATE=0.0005;THETA=0.0003;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 186922188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7072;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186922194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9705;AVGPOST=0.9994;RSQ=0.9898;ERATE=0.0003;THETA=0.0005;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186922200 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3339;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 186922203 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9603;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186922205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5874;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186922395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2316;AVGPOST=0.9979;RSQ=0.9955;ERATE=0.0005;THETA=0.0003;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 186922407 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8843;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186922423 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0096;AVGPOST=0.9997;RSQ=0.9853;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186922475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0118;AVGPOST=0.9972;RSQ=0.9042;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186922496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186922622 . AAAT A 47786 PASS INDEL;BAVGPOST=0.985;BRSQ=0.822;LDAF=0.9558;AVGPOST=0.9809;RSQ=0.8366;ERATE=0.0028;THETA=0.0004;AC=2098;AN=2184 GT:DS:GL:BD 0.96062273 1
1 186922624 rs71740518 ATAAT A 130379 PASS INDEL;BAVGPOST=0.988;BRSQ=0.833;LDAF=0.9690;AVGPOST=0.9969;RSQ=0.9579;ERATE=0.0004;THETA=0.0003;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 186922671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.5697;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186922732 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186922825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186922826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9405;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186922897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186922983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9371;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186923085 rs35146633 AG A 38335 PASS INDEL;BAVGPOST=0.986;BRSQ=0.976;LDAF=0.3654;AVGPOST=0.9880;RSQ=0.9840;ERATE=0.0005;THETA=0.0005;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 186923090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9706;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0003;THETA=0.0002;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186923119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186923265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7474;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186923274 . GTATGTT G 214 PASS INDEL;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7643;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186923289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8223;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186923378 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7493;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186923379 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4500;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186923387 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.857;LDAF=0.9634;AVGPOST=0.9895;RSQ=0.8869;ERATE=0.0007;THETA=0.0037;AC=2109;AN=2184 GT:DS:GL:BD 0.96565932 1
1 186923432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9865;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186923453 . TCAG T 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5429;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186923475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.605;LDAF=0.0205;AVGPOST=0.9773;RSQ=0.5812;ERATE=0.0020;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 186923539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.663;LDAF=0.0085;AVGPOST=0.9941;RSQ=0.7000;ERATE=0.0006;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186923560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.720;LDAF=0.9200;AVGPOST=0.9339;RSQ=0.6610;ERATE=0.0077;THETA=0.0003;AC=2053;AN=2184 GT:DS:GL:BD 0.94001830 1
1 186923581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.968;LDAF=0.1840;AVGPOST=0.9929;RSQ=0.9838;ERATE=0.0005;THETA=0.0003;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 186923594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.970;LDAF=0.3304;AVGPOST=0.9884;RSQ=0.9811;ERATE=0.0010;THETA=0.0010;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 186923666 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9675;AVGPOST=0.9941;RSQ=0.9271;ERATE=0.0008;THETA=0.0006;AC=2115;AN=2184 GT:DS:GL:BD 0.96840662 1
1 186923678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0054;AVGPOST=0.9994;RSQ=0.9648;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186923716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.829;LDAF=0.9639;AVGPOST=0.9916;RSQ=0.9053;ERATE=0.0009;THETA=0.0003;AC=2109;AN=2184 GT:DS:GL:BD 0.96565932 1
1 186923767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6323;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186923791 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0426;AVGPOST=0.9996;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 186923798 rs11375182 C CT 66268 PASS INDEL;BAVGPOST=0.970;BRSQ=0.836;LDAF=0.9048;AVGPOST=0.9463;RSQ=0.7540;ERATE=0.0184;THETA=0.0007;AC=2012;AN=2184 GT:DS:GL:BD 0.92124540 1
1 186923807 . C CT 12 PASS INDEL;BAVGPOST=0.996;BRSQ=0.700;LDAF=0.0117;AVGPOST=0.9862;RSQ=0.5244;ERATE=0.0036;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186923816 . AAC A 356 PASS INDEL;BAVGPOST=0.983;BRSQ=0.646;LDAF=0.0434;AVGPOST=0.9484;RSQ=0.5050;ERATE=0.0116;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 186923837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0058;AVGPOST=0.9915;RSQ=0.4964;ERATE=0.0007;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186923908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186923909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9717;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186923910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1888;AVGPOST=0.9979;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 186923912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.791;LDAF=0.0046;AVGPOST=0.9972;RSQ=0.7559;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186923952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9706;AVGPOST=0.9993;RSQ=0.9888;ERATE=0.0003;THETA=0.0003;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186924054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9708;AVGPOST=0.9997;RSQ=0.9951;ERATE=0.0003;THETA=0.0008;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186924135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.9708;AVGPOST=0.9995;RSQ=0.9912;ERATE=0.0003;THETA=0.0009;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186924175 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186924214 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9702;AVGPOST=0.9989;RSQ=0.9816;ERATE=0.0004;THETA=0.0007;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186924259 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2087;AVGPOST=0.9979;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 186924349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5754;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186924377 . T TA 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5522;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186924440 . AAT A 401 PASS INDEL;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0078;AVGPOST=0.9994;RSQ=0.9653;ERATE=0.0002;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186924448 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0072;AVGPOST=0.9992;RSQ=0.9544;ERATE=0.0002;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186924483 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186924503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5465;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186924504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0022;AVGPOST=0.9968;RSQ=0.4248;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186924656 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.9691;AVGPOST=0.9982;RSQ=0.9734;ERATE=0.0007;THETA=0.0002;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 186924706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9706;AVGPOST=0.9997;RSQ=0.9947;ERATE=0.0003;THETA=0.0008;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186924724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3344;AVGPOST=0.9956;RSQ=0.9930;ERATE=0.0003;THETA=0.0015;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 186924726 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2074;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 186924776 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0041;AVGPOST=0.9975;RSQ=0.7759;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186924801 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9705;AVGPOST=0.9995;RSQ=0.9924;ERATE=0.0004;THETA=0.0004;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186924827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9705;AVGPOST=0.9993;RSQ=0.9887;ERATE=0.0004;THETA=0.0006;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186924950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0077;AVGPOST=0.9989;RSQ=0.9351;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186924969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.762;LDAF=0.9448;AVGPOST=0.9730;RSQ=0.8087;ERATE=0.0016;THETA=0.0004;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 186924974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.941;LDAF=0.0566;AVGPOST=0.9902;RSQ=0.9378;ERATE=0.0003;THETA=0.0007;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 186925024 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.781;LDAF=0.9558;AVGPOST=0.9803;RSQ=0.8278;ERATE=0.0020;THETA=0.0008;AC=2100;AN=2184 GT:DS:GL:BD 0.96153843 1
1 186925065 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.870;LDAF=0.9513;AVGPOST=0.9823;RSQ=0.8612;ERATE=0.0008;THETA=0.0003;AC=2086;AN=2184 GT:DS:GL:BD 0.95512819 1
1 186925094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.822;LDAF=0.9504;AVGPOST=0.9806;RSQ=0.8562;ERATE=0.0004;THETA=0.0007;AC=2084;AN=2184 GT:DS:GL:BD 0.95421243 1
1 186925114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2310;AVGPOST=0.9967;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 186925119 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0223;AVGPOST=0.9970;RSQ=0.9503;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 186925168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9707;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0002;THETA=0.0004;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186925169 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.1226;AVGPOST=0.9937;RSQ=0.9792;ERATE=0.0002;THETA=0.0019;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 186925170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0292;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0002;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 186925194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9707;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0002;THETA=0.0006;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186925277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186925334 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186925406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0011;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186925434 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186925552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9707;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186925562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186925633 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0243;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0002;THETA=0.0013;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 186925636 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.9617;AVGPOST=0.9991;RSQ=0.9893;ERATE=0.0004;THETA=0.0006;AC=2101;AN=2184 GT:DS:GL:BD 0.96199632 1
1 186925723 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186925740 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186925939 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7785;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186925966 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186926050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.4740;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186926149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.7545;AVGPOST=0.9920;RSQ=0.9851;ERATE=0.0012;THETA=0.0007;AC=1649;AN=2184 GT:DS:GL:BD 0.75503665 1
1 186926213 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8957;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186926248 rs12720655 C CT 97577 PASS INDEL;BAVGPOST=0.981;BRSQ=0.809;LDAF=0.9455;AVGPOST=0.9737;RSQ=0.8046;ERATE=0.0059;THETA=0.0006;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 186926374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.8941;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186926437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9705;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0003;THETA=0.0008;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186926498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8923;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186926558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.861;LDAF=0.0069;AVGPOST=0.9972;RSQ=0.8557;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186926621 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0095;AVGPOST=0.9995;RSQ=0.9799;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186926676 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9706;AVGPOST=0.9997;RSQ=0.9947;ERATE=0.0003;THETA=0.0010;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186926726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.8934;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186926733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186926772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9706;AVGPOST=0.9996;RSQ=0.9932;ERATE=0.0003;THETA=0.0007;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186927017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9706;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0006;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186927276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4411;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186927366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5076;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186927369 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.9696;AVGPOST=0.9980;RSQ=0.9715;ERATE=0.0005;THETA=0.0006;AC=2119;AN=2184 GT:DS:GL:BD 0.97023809 1
1 186927507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186927675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9706;AVGPOST=0.9996;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186927831 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6172;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186927946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4140;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186927994 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1875;AVGPOST=0.9983;RSQ=0.9957;ERATE=0.0005;THETA=0.0007;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 186928056 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9692;AVGPOST=0.9986;RSQ=0.9785;ERATE=0.0006;THETA=0.0007;AC=2118;AN=2184 GT:DS:GL:BD 0.96978021 1
1 186928120 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9986;RSQ=0.8802;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186928124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0002;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186928135 . A AT 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0026;AVGPOST=0.9963;RSQ=0.5441;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186928142 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8699;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186928211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9705;AVGPOST=0.9994;RSQ=0.9903;ERATE=0.0004;THETA=0.0007;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186928235 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9759;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186928343 . AT A 32713 PASS INDEL;BAVGPOST=1.000;BRSQ=0;LDAF=0.9998;AVGPOST=0.9995;RSQ=0.0596;ERATE=0.0003;THETA=0.0004;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 186928389 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9542;ERATE=0.0003;THETA=0.0026;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186928481 . A ATAAAC 99848 PASS INDEL;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.9672;AVGPOST=0.9963;RSQ=0.9525;ERATE=0.0004;THETA=0.0004;AC=2112;AN=2184 GT:DS:GL:BD 0.96703297 1
1 186928499 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0047;AVGPOST=0.9957;RSQ=0.6780;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186928689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8010;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186928748 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7631;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186928754 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9576;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186928764 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4633;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186928811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7564;AVGPOST=0.9976;RSQ=0.9949;ERATE=0.0005;THETA=0.0012;AC=1652;AN=2184 GT:DS:GL:BD 0.75641024 1
1 186928911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0036;AVGPOST=0.9966;RSQ=0.6335;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186928965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5240;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186929041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.620;LDAF=0.0151;AVGPOST=0.9791;RSQ=0.4891;ERATE=0.0021;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186929050 . C CGAAAGG 24708 PASS INDEL;BAVGPOST=0.948;BRSQ=0.906;LDAF=0.3552;AVGPOST=0.9364;RSQ=0.8991;ERATE=0.0083;THETA=0.0005;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 186929051 rs112362999 T TAAAGGA 64170 PASS INDEL;BAVGPOST=0.960;BRSQ=0.927;LDAF=0.3757;AVGPOST=0.9770;RSQ=0.9649;ERATE=0.0006;THETA=0.0006;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 186929096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.9700;AVGPOST=0.9986;RSQ=0.9763;ERATE=0.0005;THETA=0.0005;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186929111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7478;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186929167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5730;ERATE=0.0005;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186929255 . CAT C 484 PASS INDEL;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0086;AVGPOST=0.9968;RSQ=0.8614;ERATE=0.0007;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186929395 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186929551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1875;AVGPOST=0.9975;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 186929574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6672;ERATE=0.0007;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186929589 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7425;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186929591 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6544;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186929601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9710;AVGPOST=0.9990;RSQ=0.9876;ERATE=0.0003;THETA=0.0007;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186929619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0481;AVGPOST=0.9985;RSQ=0.9874;ERATE=0.0003;THETA=0.0005;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 186929696 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9705;AVGPOST=0.9994;RSQ=0.9911;ERATE=0.0003;THETA=0.0008;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186929710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.7551;AVGPOST=0.9978;RSQ=0.9957;ERATE=0.0003;THETA=0.0007;AC=1650;AN=2184 GT:DS:GL:BD 0.75549453 1
1 186929713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.7553;AVGPOST=0.9975;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=1650;AN=2184 GT:DS:GL:BD 0.75549453 1
1 186929936 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186929990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6019;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186930018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.9217;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186930187 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4498;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186930255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186930358 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7376;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186930379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9307;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186930408 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0059;AVGPOST=0.9999;RSQ=0.9926;ERATE=0.0002;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186930476 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0056;AVGPOST=0.9980;RSQ=0.8664;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186930485 . AAAG A 744 PASS INDEL;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0050;AVGPOST=0.9982;RSQ=0.8388;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186930638 rs67233102 TAAC T 105464 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9700;AVGPOST=0.9984;RSQ=0.9751;ERATE=0.0005;THETA=0.0004;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186930753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0194;AVGPOST=0.9996;RSQ=0.9915;ERATE=0.0002;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 186931119 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186931165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5811;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186931177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2136;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 186931448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1345;AVGPOST=0.9931;RSQ=0.9775;ERATE=0.0003;THETA=0.0015;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 186931459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9648;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186931504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0312;AVGPOST=0.9976;RSQ=0.9703;ERATE=0.0002;THETA=0.0029;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 186931513 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.556;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7477;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186931617 . AT A 73 PASS INDEL;BAVGPOST=0.997;BRSQ=0.481;LDAF=0.0117;AVGPOST=0.9819;RSQ=0.3609;ERATE=0.0023;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186931622 . A AT 8970 PASS INDEL;BAVGPOST=0.970;BRSQ=0.929;LDAF=0.2239;AVGPOST=0.9360;RSQ=0.8738;ERATE=0.0105;THETA=0.0005;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 186931638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.713;LDAF=0.0183;AVGPOST=0.9901;RSQ=0.7791;ERATE=0.0007;THETA=0.0010;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 186931657 . TA T 77 PASS INDEL;BAVGPOST=0.980;BRSQ=0.304;LDAF=0.0277;AVGPOST=0.9612;RSQ=0.4438;ERATE=0.0033;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186931677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.480;LDAF=0.0127;AVGPOST=0.9893;RSQ=0.6522;ERATE=0.0009;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186931717 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.563;LDAF=0.0107;AVGPOST=0.9864;RSQ=0.4848;ERATE=0.0008;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186931746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.968;LDAF=0.3661;AVGPOST=0.9771;RSQ=0.9657;ERATE=0.0019;THETA=0.0002;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 186931864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1877;AVGPOST=0.9933;RSQ=0.9825;ERATE=0.0003;THETA=0.0002;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 186931958 . G GT 30516 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.9683;AVGPOST=0.9973;RSQ=0.9623;ERATE=0.0005;THETA=0.0005;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 186931959 rs11441392 T TA 82827 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.9674;AVGPOST=0.9953;RSQ=0.9421;ERATE=0.0006;THETA=0.0006;AC=2115;AN=2184 GT:DS:GL:BD 0.96840662 1
1 186931975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.556;LDAF=0.0037;AVGPOST=0.9970;RSQ=0.7085;ERATE=0.0007;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186932042 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5899;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186932211 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3739;AVGPOST=0.9904;RSQ=0.9860;ERATE=0.0009;THETA=0.0015;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 186932223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9701;AVGPOST=0.9984;RSQ=0.9743;ERATE=0.0006;THETA=0.0003;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186932348 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3663;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186932414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186932456 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8433;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186932466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5569;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186932599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6800;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186932629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4536;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186932658 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6632;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186932817 . C CT 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0054;AVGPOST=0.9985;RSQ=0.8785;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186932915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6263;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186933025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9706;AVGPOST=0.9997;RSQ=0.9955;ERATE=0.0003;THETA=0.0010;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 186933191 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9113;ERATE=0.0003;THETA=0.0041;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186933265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0078;AVGPOST=0.9989;RSQ=0.9388;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186933379 . A AT 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.4772;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186933441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8842;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186933447 . A AT 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186933476 rs12720658 G GTAAT 54705 PASS INDEL;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2109;AVGPOST=0.9969;RSQ=0.9940;ERATE=0.0004;THETA=0.0006;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 186933478 . A AATTG 31113 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2095;AVGPOST=0.9880;RSQ=0.9776;ERATE=0.0028;THETA=0.0004;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 186933495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7139;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186933555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4450;AVGPOST=0.9958;RSQ=0.9941;ERATE=0.0010;THETA=0.0037;AC=970;AN=2184 GT:DS:GL:BD 0.44413918 0
1 186933738 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.2829;ERATE=0.0003;THETA=0.0018;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186933764 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9749;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186934064 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9303;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186934092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2328;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 186934163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186934187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2448;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0003;THETA=0.0111;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 186934252 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0102;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186934420 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0107;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186934475 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186934481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186934559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186934668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0051;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186934691 . CT C 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186934719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0005;THETA=0.0109;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186934742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186934808 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186934853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186934871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.9670;AVGPOST=0.9994;RSQ=0.9920;ERATE=0.0003;THETA=0.0015;AC=2112;AN=2184 GT:DS:GL:BD 0.96703297 1
1 186934979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0002;THETA=0.0041;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186935062 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.842;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9466;ERATE=0.0002;THETA=0.0110;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186935112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0165;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186935199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.978;LDAF=0.1699;AVGPOST=0.9901;RSQ=0.9743;ERATE=0.0003;THETA=0.0072;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 186935471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6151;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186935562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8976;ERATE=0.0004;THETA=0.0059;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186935641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0366;AVGPOST=0.9976;RSQ=0.9765;ERATE=0.0004;THETA=0.0011;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 186935656 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0002;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186935659 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186935716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.8188;ERATE=0.0003;THETA=0.0037;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186935752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186935949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9606;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=2098;AN=2184 GT:DS:GL:BD 0.96062273 1
1 186935977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.9006;ERATE=0.0003;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186936041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186936096 . AT A 154 PASS INDEL;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.6491;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186936162 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9607;AVGPOST=0.9965;RSQ=0.9681;ERATE=0.0005;THETA=0.0052;AC=2100;AN=2184 GT:DS:GL:BD 0.96153843 1
1 186936265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186936346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9082;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186936470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186936504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6690;ERATE=0.0003;THETA=0.0051;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186936579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0003;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186936590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.9623;AVGPOST=0.9993;RSQ=0.9936;ERATE=0.0003;THETA=0.0014;AC=2102;AN=2184 GT:DS:GL:BD 0.96245420 1
1 186936651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.6936;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186936668 . GT G 10402 PASS INDEL;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1248;AVGPOST=0.9926;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 186936803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186937194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9608;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0002;THETA=0.0028;AC=2098;AN=2184 GT:DS:GL:BD 0.96062273 1
1 186937211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.9126;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186937216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186937220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186937299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0053;AVGPOST=0.9991;RSQ=0.9279;ERATE=0.0004;THETA=0.0026;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186937326 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6104;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186937463 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5295;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186937530 . GTA G 2275 PASS INDEL;BAVGPOST=0.977;BRSQ=0.863;LDAF=0.0902;AVGPOST=0.9767;RSQ=0.8950;ERATE=0.0009;THETA=0.0006;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 186937532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.922;BRSQ=0.734;LDAF=0.1950;AVGPOST=0.8805;RSQ=0.6876;ERATE=0.0431;THETA=0.0007;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 186937692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.633;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5955;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186937704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6863;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186937754 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1639;AVGPOST=0.9930;RSQ=0.9811;ERATE=0.0007;THETA=0.0008;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 186937758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.4455;ERATE=0.0007;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186937786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5509;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186937861 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0011;AVGPOST=0.9981;RSQ=0.2545;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186937865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.665;LDAF=0.0041;AVGPOST=0.9976;RSQ=0.7542;ERATE=0.0008;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186937956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.713;LDAF=0.0084;AVGPOST=0.9940;RSQ=0.7066;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186938061 . A AT 171 PASS INDEL;BAVGPOST=0.971;BRSQ=0.784;LDAF=0.0535;AVGPOST=0.9748;RSQ=0.8382;ERATE=0.0006;THETA=0.0006;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 186938062 rs74956429 T TA 5161 PASS INDEL;BAVGPOST=0.993;BRSQ=0.964;LDAF=0.0859;AVGPOST=0.9926;RSQ=0.9662;ERATE=0.0005;THETA=0.0004;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 186938064 . A AG 105 PASS INDEL;BAVGPOST=0.971;BRSQ=0.780;LDAF=0.0551;AVGPOST=0.9754;RSQ=0.8479;ERATE=0.0006;THETA=0.0041;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 186938104 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.794;LDAF=0.0125;AVGPOST=0.9927;RSQ=0.7612;ERATE=0.0004;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186938121 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186938193 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.3814;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186938222 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0144;AVGPOST=0.9984;RSQ=0.9563;ERATE=0.0004;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186938303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2022;AVGPOST=0.9946;RSQ=0.9865;ERATE=0.0006;THETA=0.0026;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 186938365 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5320;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186938470 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1966;AVGPOST=0.9978;RSQ=0.9943;ERATE=0.0004;THETA=0.0003;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 186938563 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9126;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186938718 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0615;AVGPOST=0.9963;RSQ=0.9780;ERATE=0.0003;THETA=0.0008;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 186938798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9349;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186938875 rs61377388 AT A 52793 PASS INDEL;BAVGPOST=0.989;BRSQ=0.975;LDAF=0.7508;AVGPOST=0.9693;RSQ=0.9377;ERATE=0.0132;THETA=0.0005;AC=1650;AN=2184 GT:DS:GL:BD 0.75549453 1
1 186938896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186938936 . CATTT C 112 PASS INDEL;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8934;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186939149 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5730;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186939288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0087;AVGPOST=0.9956;RSQ=0.8248;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186939297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0236;AVGPOST=0.9984;RSQ=0.9781;ERATE=0.0003;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 186939348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8326;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186939415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.733;LDAF=0.0041;AVGPOST=0.9975;RSQ=0.7682;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186939496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186939615 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8709;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186939688 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0382;AVGPOST=0.9993;RSQ=0.9922;ERATE=0.0004;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 186939774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9183;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186939821 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8083;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186939830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8195;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186939840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9610;AVGPOST=0.9996;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=2099;AN=2184 GT:DS:GL:BD 0.96108061 1
1 186939851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8737;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186939903 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0380;AVGPOST=0.9997;RSQ=0.9966;ERATE=0.0002;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 186939936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1958;AVGPOST=0.9971;RSQ=0.9932;ERATE=0.0004;THETA=0.0003;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 186940007 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4959;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186940052 . AT A 53 PASS INDEL;BAVGPOST=0.977;BRSQ=0.371;LDAF=0.0427;AVGPOST=0.9392;RSQ=0.4079;ERATE=0.0118;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 186940071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5849;AVGPOST=0.9971;RSQ=0.9956;ERATE=0.0006;THETA=0.0004;AC=1278;AN=2184 GT:DS:GL:BD 0.58516484 1
1 186940241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186940261 . T TC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4856;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186940438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9846;AVGPOST=0.9993;RSQ=0.9787;ERATE=0.0004;THETA=0.0004;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 186940457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0225;AVGPOST=0.9992;RSQ=0.9864;ERATE=0.0004;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 186940468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7731;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186940523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8000;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186940756 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9596;AVGPOST=0.9968;RSQ=0.9675;ERATE=0.0004;THETA=0.0005;AC=2098;AN=2184 GT:DS:GL:BD 0.96062273 1
1 186940932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9978;RSQ=0.8819;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186940959 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6241;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186941085 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7508;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186941254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6314;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186941496 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1984;AVGPOST=0.9983;RSQ=0.9961;ERATE=0.0003;THETA=0.0007;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 186941526 . CAA C 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186941597 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186941600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9848;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0002;THETA=0.0006;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 186941770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186941815 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0224;AVGPOST=0.9990;RSQ=0.9855;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 186941897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1970;AVGPOST=0.9983;RSQ=0.9954;ERATE=0.0005;THETA=0.0005;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 186942003 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0240;AVGPOST=0.9995;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 186942016 . T TG 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5547;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186942081 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186942100 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1999;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0005;THETA=0.0003;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 186942137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7577;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186942159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186942242 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9521;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186942246 . TAAC T 4340 PASS INDEL;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0214;AVGPOST=0.9982;RSQ=0.9678;ERATE=0.0003;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 186942293 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186942370 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186942438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186942538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0009;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186942610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1992;AVGPOST=0.9980;RSQ=0.9951;ERATE=0.0005;THETA=0.0007;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 186942707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186942778 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7397;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186942813 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9847;AVGPOST=0.9991;RSQ=0.9740;ERATE=0.0003;THETA=0.0003;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 186942832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6378;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186942898 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0072;AVGPOST=0.9976;RSQ=0.8558;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186943024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186943180 . G GTA 8132 PASS INDEL;BAVGPOST=0.969;BRSQ=0.919;LDAF=0.2526;AVGPOST=0.9171;RSQ=0.8293;ERATE=0.0163;THETA=0.0005;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 186943188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.736;LDAF=0.9183;AVGPOST=0.9489;RSQ=0.7387;ERATE=0.0051;THETA=0.0004;AC=2032;AN=2184 GT:DS:GL:BD 0.93040293 1
1 186943188 . GTA G 25620 PASS INDEL;BAVGPOST=0.977;BRSQ=0.506;LDAF=0.9641;AVGPOST=0.9767;RSQ=0.7523;ERATE=0.0010;THETA=0.0003;AC=2109;AN=2184 GT:DS:GL:BD 0.96565932 1
1 186943190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.1966;AVGPOST=0.9964;RSQ=0.9903;ERATE=0.0006;THETA=0.0003;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 186943250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.7963;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186943322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6856;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186943346 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186943392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0173;AVGPOST=0.9978;RSQ=0.9489;ERATE=0.0003;THETA=0.0014;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 186943559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.761;LDAF=0.9157;AVGPOST=0.9339;RSQ=0.6826;ERATE=0.0154;THETA=0.0004;AC=2035;AN=2184 GT:DS:GL:BD 0.93177658 1
1 186943685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0233;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0002;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 186943801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0148;AVGPOST=0.9996;RSQ=0.9903;ERATE=0.0002;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 186943833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5711;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186944267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186944307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186944390 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.804;LDAF=0.0096;AVGPOST=0.9955;RSQ=0.8247;ERATE=0.0006;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186944401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8084;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186944572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0818;AVGPOST=0.9983;RSQ=0.9910;ERATE=0.0005;THETA=0.0004;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 186944687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186944688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4341;AVGPOST=0.9972;RSQ=0.9959;ERATE=0.0004;THETA=0.0002;AC=949;AN=2184 GT:DS:GL:BD 0.43452382 0
1 186944701 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0075;AVGPOST=0.9972;RSQ=0.8490;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186944713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186944764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0002;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186944770 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0509;AVGPOST=0.9992;RSQ=0.9932;ERATE=0.0002;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 186944829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8709;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186944983 . CT C 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186945134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5450;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186945274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186945349 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6457;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186945497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.957;LDAF=0.1376;AVGPOST=0.9939;RSQ=0.9814;ERATE=0.0005;THETA=0.0003;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 186945498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186945690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186945952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9756;ERATE=0.0002;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186945978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7944;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186946010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.9617;AVGPOST=0.9958;RSQ=0.9564;ERATE=0.0003;THETA=0.0006;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 186946017 . AC A 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186946057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0070;AVGPOST=0.9988;RSQ=0.9361;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186946068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0026;AVGPOST=0.9996;RSQ=0.9462;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186946122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8581;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186946165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5607;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186946220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5722;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186946268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9749;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186946303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186946369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0386;AVGPOST=0.9980;RSQ=0.9782;ERATE=0.0003;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 186946386 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4133;AVGPOST=0.9976;RSQ=0.9967;ERATE=0.0005;THETA=0.0005;AC=903;AN=2184 GT:DS:GL:BD 0.41346154 0
1 186946465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186946631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0225;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 186946638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1641;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0002;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 186946639 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186946641 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1641;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0003;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 186946722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186946860 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186946869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186946872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186946912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9849;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 186946991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186947098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186947224 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2210;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0002;THETA=0.0003;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 186947245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186947359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9646;AVGPOST=0.9986;RSQ=0.9848;ERATE=0.0004;THETA=0.0004;AC=2107;AN=2184 GT:DS:GL:BD 0.96474361 1
1 186947503 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8025;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186947557 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9899;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186947589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7640;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186947641 rs112793937 CAAAG C 3045 PASS INDEL;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0214;AVGPOST=0.9983;RSQ=0.9647;ERATE=0.0005;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 186947725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7379;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186947729 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4126;AVGPOST=0.9985;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 186947810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6165;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186947928 . C CT 193 PASS INDEL;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7744;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186947953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186947966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186948027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4258;AVGPOST=0.9977;RSQ=0.9968;ERATE=0.0006;THETA=0.0003;AC=931;AN=2184 GT:DS:GL:BD 0.42628205 0
1 186948085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9795;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186948120 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9848;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 186948142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9829;ERATE=0.0002;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186948221 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0233;AVGPOST=0.9998;RSQ=0.9958;ERATE=0.0002;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 186948302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186948448 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9343;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186948481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0011;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 186948615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186948651 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186948851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8665;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186948857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186948862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4217;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 186948870 . TATATG T 47 PASS INDEL;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.5062;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186948983 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5765;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186948985 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186949062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.4233;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186949110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0149;AVGPOST=0.9940;RSQ=0.8479;ERATE=0.0009;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 186949144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0031;AVGPOST=0.9957;RSQ=0.4496;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186949158 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.733;LDAF=0.0170;AVGPOST=0.9855;RSQ=0.6773;ERATE=0.0006;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186949318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0292;AVGPOST=0.9953;RSQ=0.9426;ERATE=0.0004;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 186949320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.977;LDAF=0.4171;AVGPOST=0.9912;RSQ=0.9872;ERATE=0.0011;THETA=0.0004;AC=917;AN=2184 GT:DS:GL:BD 0.41987181 0
1 186949438 rs12720697 A AC 124 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186949635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5981;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186949762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186949764 . TG T 95 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186949829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0888;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 186949902 rs16670 CTTTAA C 48142 PASS INDEL;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4220;AVGPOST=0.9975;RSQ=0.9959;ERATE=0.0007;THETA=0.0005;AC=923;AN=2184 GT:DS:GL:BD 0.42261904 0
1 186950070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9017;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186950294 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0109;AVGPOST=0.9981;RSQ=0.9320;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186950473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186950479 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9544;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186950525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9402;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186950668 . AAT A 195 PASS INDEL;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.7260;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186950765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186950825 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0164;AVGPOST=0.9983;RSQ=0.9607;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 186950927 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5765;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186951027 rs77423922 C CATA 157391 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.9846;AVGPOST=0.9992;RSQ=0.9773;ERATE=0.0003;THETA=0.0006;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 186951050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.750;LDAF=0.0057;AVGPOST=0.9977;RSQ=0.8201;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186951053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0102;AVGPOST=0.9978;RSQ=0.9140;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186951102 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186951154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186951200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0227;AVGPOST=0.9993;RSQ=0.9896;ERATE=0.0002;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 186951429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4215;AVGPOST=0.9981;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 186951548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186951716 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9692;ERATE=0.0005;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186951817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.690;LDAF=0.0041;AVGPOST=0.9977;RSQ=0.7689;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186951893 rs79629897 TC T 6126 PASS INDEL;BAVGPOST=0.995;BRSQ=0.972;LDAF=0.0885;AVGPOST=0.9991;RSQ=0.9951;ERATE=0.0004;THETA=0.0002;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 186952017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.950;LDAF=0.1627;AVGPOST=0.9924;RSQ=0.9789;ERATE=0.0012;THETA=0.0002;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 186952059 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0434;AVGPOST=0.9973;RSQ=0.9737;ERATE=0.0005;THETA=0.0003;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 186952195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.975;LDAF=0.0888;AVGPOST=0.9989;RSQ=0.9942;ERATE=0.0003;THETA=0.0006;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 186952213 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0093;AVGPOST=0.9890;RSQ=0.5376;ERATE=0.0007;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186952232 . G GA 35292 PASS INDEL;BAVGPOST=0.875;BRSQ=0.418;LDAF=0.8742;AVGPOST=0.8690;RSQ=0.5466;ERATE=0.0102;THETA=0.0005;AC=1964;AN=2184 GT:DS:GL:BD 0.89926738 1
1 186952259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.4226;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=924;AN=2184 GT:DS:GL:BD 0.42307693 0
1 186952288 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4220;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 186952333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4218;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 186952409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2486;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 186952436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186952455 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9476;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186952510 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0621;AVGPOST=0.9981;RSQ=0.9891;ERATE=0.0003;THETA=0.0003;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 186952631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2397;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 186952673 . GTTTATC G 198 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5470;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186952721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0816;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 186952799 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6878;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186952818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186952836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.6607;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186952885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7739;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186952889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0104;AVGPOST=0.9947;RSQ=0.8488;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186952911 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186952980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9044;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186953291 rs10633079 C CTT 417 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8023;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186953410 . C CT 37 PASS INDEL;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5905;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186953498 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186953521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2401;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 186953530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9820;ERATE=0.0002;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186953568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5764;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186953591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6909;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186953611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186953748 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8557;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186953761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.5411;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186954034 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6719;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186954081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186954195 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0787;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0002;THETA=0.0005;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 186954204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186954285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4607;AVGPOST=0.9976;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 186954338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9996;RSQ=0.9728;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186954339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9674;ERATE=0.0002;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186954604 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186954633 . CT C 310 PASS INDEL;BAVGPOST=0.997;BRSQ=0.731;LDAF=0.0045;AVGPOST=0.9973;RSQ=0.7457;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186954825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6592;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186954854 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2319;AVGPOST=0.9982;RSQ=0.9964;ERATE=0.0003;THETA=0.0081;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 186954902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0071;AVGPOST=0.9993;RSQ=0.9522;ERATE=0.0004;THETA=0.0021;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186955158 . CAGGGT C 219 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8145;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186955171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186955366 . A AT 181 PASS INDEL;BAVGPOST=0.996;BRSQ=0.596;LDAF=0.0074;AVGPOST=0.9925;RSQ=0.6061;ERATE=0.0015;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186955430 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4707;AVGPOST=0.9964;RSQ=0.9953;ERATE=0.0004;THETA=0.0010;AC=1027;AN=2184 GT:DS:GL:BD 0.47023809 0
1 186955782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0377;AVGPOST=0.9994;RSQ=0.9946;ERATE=0.0002;THETA=0.0066;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 186955859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186955932 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0380;AVGPOST=0.9991;RSQ=0.9894;ERATE=0.0003;THETA=0.0061;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 186956083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5861;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186956152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186956213 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2072;AVGPOST=0.9983;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 186956378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1958;AVGPOST=0.9962;RSQ=0.9910;ERATE=0.0005;THETA=0.0004;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 186956439 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186956455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186956511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186956537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186956595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5207;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186956759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186956824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186956844 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186956933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186956990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9210;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186957017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0393;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0002;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 186957107 . TG T 84 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186957215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7177;AVGPOST=0.9953;RSQ=0.9924;ERATE=0.0019;THETA=0.0003;AC=1565;AN=2184 GT:DS:GL:BD 0.71657509 1
1 186957220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.9794;AVGPOST=0.9994;RSQ=0.9867;ERATE=0.0002;THETA=0.0003;AC=2139;AN=2184 GT:DS:GL:BD 0.97939563 1
1 186957375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186957378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186957379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186957637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0068;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186957855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186957996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0393;AVGPOST=0.9995;RSQ=0.9943;ERATE=0.0002;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 186958005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7548;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186958075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.772;LDAF=0.0122;AVGPOST=0.9945;RSQ=0.8131;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186958099 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6819;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186958130 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.705;LDAF=0.0106;AVGPOST=0.9923;RSQ=0.7212;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186958245 . AT A 454 PASS INDEL;BAVGPOST=0.996;BRSQ=0.767;LDAF=0.0072;AVGPOST=0.9969;RSQ=0.8313;ERATE=0.0005;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186958246 . T TTTAA 112 PASS INDEL;BAVGPOST=0.999;BRSQ=0.512;LDAF=0.0075;AVGPOST=0.9879;RSQ=0.3375;ERATE=0.0013;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186958248 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.809;LDAF=0.0181;AVGPOST=0.9881;RSQ=0.7291;ERATE=0.0016;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186958279 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0049;AVGPOST=0.9982;RSQ=0.8305;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186958288 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0048;AVGPOST=0.9939;RSQ=0.5355;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186958340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.873;LDAF=0.0254;AVGPOST=0.9885;RSQ=0.8512;ERATE=0.0005;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 186958379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.853;LDAF=0.0159;AVGPOST=0.9956;RSQ=0.8733;ERATE=0.0005;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186958442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.977;LDAF=0.2058;AVGPOST=0.9915;RSQ=0.9823;ERATE=0.0009;THETA=0.0003;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 186958567 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186958576 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0049;AVGPOST=0.9972;RSQ=0.7649;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186958576 . G GT 58 PASS INDEL;BAVGPOST=0.998;BRSQ=0.519;LDAF=0.0058;AVGPOST=0.9946;RSQ=0.6166;ERATE=0.0013;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186958629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0146;AVGPOST=0.9968;RSQ=0.9122;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186958672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0418;AVGPOST=0.9983;RSQ=0.9852;ERATE=0.0002;THETA=0.0002;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 186958684 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186958700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186958724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186959004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186959071 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0393;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0002;THETA=0.0007;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 186959082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0767;AVGPOST=0.9982;RSQ=0.9896;ERATE=0.0003;THETA=0.0001;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 186959145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2075;AVGPOST=0.9985;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 186959161 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8266;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186959364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8786;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186959386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0400;AVGPOST=0.9993;RSQ=0.9923;ERATE=0.0005;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 186959437 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186959455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186959518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1925;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 186959650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186959654 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186959661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8437;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186959736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5511;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186959791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186960016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186960067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6898;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186960175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8445;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186960200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9713;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186960250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5209;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186960583 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186960658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5672;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186960684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9851;AVGPOST=0.9995;RSQ=0.9833;ERATE=0.0003;THETA=0.0011;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 186960695 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7796;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186960841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9689;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186961049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0082;AVGPOST=0.9993;RSQ=0.9662;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186961182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9622;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186961191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0070;AVGPOST=0.9993;RSQ=0.9523;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186961311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9769;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186961326 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7254;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0002;THETA=0.0005;AC=1585;AN=2184 GT:DS:GL:BD 0.72573262 1
1 186961387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7200;AVGPOST=0.9974;RSQ=0.9954;ERATE=0.0005;THETA=0.0007;AC=1572;AN=2184 GT:DS:GL:BD 0.71978021 1
1 186961502 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.7182;AVGPOST=0.9980;RSQ=0.9962;ERATE=0.0005;THETA=0.0005;AC=1570;AN=2184 GT:DS:GL:BD 0.71886444 1
1 186961512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186961772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5838;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186961807 . T TC 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3577;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186961863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6702;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186961894 . TAAAG T 173 PASS INDEL;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0032;AVGPOST=0.9967;RSQ=0.5761;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186961959 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6045;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186962028 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0367;AVGPOST=0.9978;RSQ=0.9796;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 186962034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2334;AVGPOST=0.9981;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 186962045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6859;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186962232 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2002;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 186962363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7928;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186962438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9349;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186962464 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6719;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186962505 . ACT A 161 PASS INDEL;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5624;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186962597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9020;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186962704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7343;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186963061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9438;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186963063 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9854;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 186963069 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6951;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186963127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5341;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186963156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8290;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186963202 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8364;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186963230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8383;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186963255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1878;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 186963294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186963341 . A AATCATTT 935 PASS INDEL;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0053;AVGPOST=0.9991;RSQ=0.9374;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186963348 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186963397 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2332;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0004;THETA=0.0006;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 186963406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9521;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186963431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1879;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0006;THETA=0.0006;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 186963433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7163;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186963441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186963472 . A AG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.3351;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186963474 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8274;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186963487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1879;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 186963488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2066;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186963553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5843;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186963584 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1887;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0004;THETA=0.0002;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 186963653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.9078;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186963691 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1883;AVGPOST=0.9980;RSQ=0.9942;ERATE=0.0006;THETA=0.0005;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 186963905 . T TG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4370;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186963957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186964061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0153;AVGPOST=0.9992;RSQ=0.9840;ERATE=0.0002;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186964068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8562;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186964100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4087;AVGPOST=0.9971;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=893;AN=2184 GT:DS:GL:BD 0.40888280 0
1 186964106 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0391;AVGPOST=0.9982;RSQ=0.9816;ERATE=0.0005;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 186964126 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0454;AVGPOST=0.9997;RSQ=0.9966;ERATE=0.0002;THETA=0.0002;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 186964135 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9821;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186964151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186964164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0457;AVGPOST=0.9992;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 186964171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8255;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186964206 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2334;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 186964433 rs113295855 G GC 29432 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1879;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 186964451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1877;AVGPOST=0.9988;RSQ=0.9964;ERATE=0.0004;THETA=0.0004;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 186964561 . G GA 1340 PASS INDEL;BAVGPOST=0.980;BRSQ=0.731;LDAF=0.0503;AVGPOST=0.9520;RSQ=0.6004;ERATE=0.0114;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 186964601 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186964676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186964706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1878;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 186964783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7220;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186964844 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9247;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186964884 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0471;AVGPOST=0.9987;RSQ=0.9895;ERATE=0.0002;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 186964935 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4482;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0003;THETA=0.0020;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 186964950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0773;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 186965042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5894;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186965183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5964;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186965203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7219;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186965221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186965222 rs67612882 TTGGCCTAG T 2115 PASS INDEL;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0069;AVGPOST=0.9993;RSQ=0.9526;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186965290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9853;AVGPOST=0.9997;RSQ=0.9914;ERATE=0.0003;THETA=0.0007;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 186965351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9648;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186965414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4287;AVGPOST=0.9975;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=937;AN=2184 GT:DS:GL:BD 0.42902932 0
1 186965417 rs76874328 TA T 20041 PASS INDEL;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1901;AVGPOST=0.9979;RSQ=0.9937;ERATE=0.0005;THETA=0.0004;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 186965566 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186965676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186965677 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0027;AVGPOST=0.9985;RSQ=0.7959;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186965680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8164;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186965993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7334;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186966193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0402;AVGPOST=0.9979;RSQ=0.9824;ERATE=0.0002;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 186966242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186966357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9203;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186966478 . C CAAT 1250 PASS INDEL;BAVGPOST=0.996;BRSQ=0.890;LDAF=0.0221;AVGPOST=0.9868;RSQ=0.7457;ERATE=0.0032;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 186966499 . T TAA 285 PASS INDEL;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0114;AVGPOST=0.9990;RSQ=0.9622;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186966664 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5323;AVGPOST=0.9969;RSQ=0.9959;ERATE=0.0004;THETA=0.0005;AC=1164;AN=2184 GT:DS:GL:BD 0.53296703 1
1 186966849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5308;AVGPOST=0.9975;RSQ=0.9963;ERATE=0.0006;THETA=0.0002;AC=1160;AN=2184 GT:DS:GL:BD 0.53113556 1
1 186967011 . T TA 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6432;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186967072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9009;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186967138 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186967150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186967167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0097;AVGPOST=0.9972;RSQ=0.8878;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186967179 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186967193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.975;LDAF=0.1899;AVGPOST=0.9963;RSQ=0.9901;ERATE=0.0007;THETA=0.0002;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 186967242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5326;AVGPOST=0.9970;RSQ=0.9952;ERATE=0.0005;THETA=0.0018;AC=1165;AN=2184 GT:DS:GL:BD 0.53342491 1
1 186967294 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.788;LDAF=0.0051;AVGPOST=0.9970;RSQ=0.7541;ERATE=0.0004;THETA=0.0025;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186967369 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9748;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186967460 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1440;AVGPOST=0.9958;RSQ=0.9890;ERATE=0.0003;THETA=0.0008;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 186967481 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1310;AVGPOST=0.9978;RSQ=0.9925;ERATE=0.0005;THETA=0.0010;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 186967513 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0639;AVGPOST=0.9966;RSQ=0.9794;ERATE=0.0003;THETA=0.0005;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 186967613 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1888;AVGPOST=0.9968;RSQ=0.9921;ERATE=0.0004;THETA=0.0044;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 186967702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4415;AVGPOST=0.9921;RSQ=0.9890;ERATE=0.0006;THETA=0.0044;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 186967717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186967766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8200;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186967788 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0362;AVGPOST=0.9983;RSQ=0.9830;ERATE=0.0003;THETA=0.0035;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 186967804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9469;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186967916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0185;AVGPOST=0.9941;RSQ=0.8765;ERATE=0.0004;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 186967975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.764;LDAF=0.0048;AVGPOST=0.9973;RSQ=0.7636;ERATE=0.0005;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186967990 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.9870;AVGPOST=0.9981;RSQ=0.9441;ERATE=0.0003;THETA=0.0006;AC=2156;AN=2184 GT:DS:GL:BD 0.98717946 1
1 186968019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0046;AVGPOST=0.9985;RSQ=0.8673;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186968056 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7782;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186968090 . A ACTC 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5067;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186968180 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1344;AVGPOST=0.9952;RSQ=0.9841;ERATE=0.0006;THETA=0.0017;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 186968220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.977;LDAF=0.1736;AVGPOST=0.9919;RSQ=0.9779;ERATE=0.0004;THETA=0.0048;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 186968224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7758;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186968225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186968256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7951;ERATE=0.0003;THETA=0.0051;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186968263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.9878;AVGPOST=0.9984;RSQ=0.9578;ERATE=0.0002;THETA=0.0026;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 186968332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186968341 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0962;AVGPOST=0.9929;RSQ=0.9699;ERATE=0.0004;THETA=0.0039;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 186968450 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8380;ERATE=0.0002;THETA=0.0182;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186968466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0004;THETA=0.0269;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186968694 . TA T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5552;ERATE=0.0003;THETA=0.0206;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186968711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.939;LDAF=0.2851;AVGPOST=0.9670;RSQ=0.9436;ERATE=0.0074;THETA=0.0283;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 186968764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9527;ERATE=0.0003;THETA=0.0161;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186968766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.767;LDAF=0.0080;AVGPOST=0.9953;RSQ=0.7731;ERATE=0.0014;THETA=0.0296;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186968779 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0262;AVGPOST=0.9971;RSQ=0.9583;ERATE=0.0004;THETA=0.0342;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 186968795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0098;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186968927 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.9890;AVGPOST=0.9979;RSQ=0.9190;ERATE=0.0004;THETA=0.0099;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 186968984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.937;LDAF=0.0550;AVGPOST=0.9914;RSQ=0.9399;ERATE=0.0030;THETA=0.0296;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 186969026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.894;LDAF=0.1181;AVGPOST=0.9714;RSQ=0.8948;ERATE=0.0110;THETA=0.0275;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 186969079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.6863;ERATE=0.0003;THETA=0.0310;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186969123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0002;THETA=0.0165;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186969159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.9991;AVGPOST=0.9984;RSQ=0.3317;ERATE=0.0004;THETA=0.0142;AC=2183;AN=2184 GT:DS:GL:BD 0.99954212 1
1 186969167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.866;LDAF=0.4357;AVGPOST=0.9115;RSQ=0.8742;ERATE=0.0238;THETA=0.0228;AC=934;AN=2184 GT:DS:GL:BD 0.42765567 0
1 186969226 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0324;AVGPOST=0.9968;RSQ=0.9634;ERATE=0.0006;THETA=0.0203;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 186969227 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186969267 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.921;LDAF=0.0399;AVGPOST=0.9919;RSQ=0.9140;ERATE=0.0004;THETA=0.0141;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 186969277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186969334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6356;ERATE=0.0003;THETA=0.0353;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186969341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7439;ERATE=0.0004;THETA=0.0154;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186969380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8955;ERATE=0.0002;THETA=0.0190;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186969451 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0160;AVGPOST=0.9973;RSQ=0.9383;ERATE=0.0004;THETA=0.0073;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186969491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0214;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186969528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0002;THETA=0.0144;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186969569 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.954;LDAF=0.3183;AVGPOST=0.9641;RSQ=0.9442;ERATE=0.0009;THETA=0.0112;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 186969643 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9850;ERATE=0.0003;THETA=0.0086;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186969740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0300;AVGPOST=0.9975;RSQ=0.9622;ERATE=0.0004;THETA=0.0011;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 186970057 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186970104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6079;ERATE=0.0004;THETA=0.0085;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186970132 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8787;ERATE=0.0002;THETA=0.0036;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186970208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6875;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186970219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0049;AVGPOST=0.9987;RSQ=0.8907;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186970233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5681;ERATE=0.0004;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186970275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0181;AVGPOST=0.9984;RSQ=0.9624;ERATE=0.0004;THETA=0.0046;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 186970476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186970515 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0090;AVGPOST=0.9984;RSQ=0.9325;ERATE=0.0004;THETA=0.0065;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186970618 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186970796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7313;ERATE=0.0002;THETA=0.0109;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186970849 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4968;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186970965 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186971165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.5931;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186971296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7999;ERATE=0.0009;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186971354 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186971518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186971573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.877;LDAF=0.0110;AVGPOST=0.9988;RSQ=0.9589;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186971813 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.9065;ERATE=0.0002;THETA=0.0023;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186971950 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0126;AVGPOST=0.9984;RSQ=0.9460;ERATE=0.0003;THETA=0.0019;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 186972092 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6490;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186972105 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186972135 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186972347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186972355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1714;AVGPOST=0.9941;RSQ=0.9823;ERATE=0.0003;THETA=0.0008;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 186972387 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9744;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186972448 . T TA 34361 PASS INDEL;BAVGPOST=0.988;BRSQ=0.982;LDAF=0.6513;AVGPOST=0.9867;RSQ=0.9808;ERATE=0.0003;THETA=0.0005;AC=1421;AN=2184 GT:DS:GL:BD 0.65064102 1
1 186972449 rs34538215 A AG 94989 PASS INDEL;BAVGPOST=0.988;BRSQ=0.982;LDAF=0.6508;AVGPOST=0.9867;RSQ=0.9808;ERATE=0.0003;THETA=0.0043;AC=1421;AN=2184 GT:DS:GL:BD 0.65064102 1
1 186972476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4653;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186972543 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0066;AVGPOST=0.9975;RSQ=0.8574;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186972562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.656;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7638;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186972619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186972671 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.622;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6696;ERATE=0.0005;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186972713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5543;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186972726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0035;AVGPOST=0.9971;RSQ=0.6742;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186972811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0165;AVGPOST=0.9966;RSQ=0.9116;ERATE=0.0012;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 186972880 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186972935 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4101;AVGPOST=0.9969;RSQ=0.9949;ERATE=0.0003;THETA=0.0016;AC=897;AN=2184 GT:DS:GL:BD 0.41071430 0
1 186973023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186973154 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0170;AVGPOST=0.9994;RSQ=0.9829;ERATE=0.0003;THETA=0.0019;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 186973394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0170;AVGPOST=0.9994;RSQ=0.9834;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 186973497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9706;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186973537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.3212;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186973544 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186973574 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7681;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186973775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.878;LDAF=0.0341;AVGPOST=0.9942;RSQ=0.9340;ERATE=0.0003;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 186973783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.7485;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0005;THETA=0.0003;AC=1635;AN=2184 GT:DS:GL:BD 0.74862635 1
1 186973902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186974008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1979;AVGPOST=0.9978;RSQ=0.9943;ERATE=0.0004;THETA=0.0005;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 186974082 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186974098 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.7152;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186974102 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186974128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186974201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4477;AVGPOST=0.9965;RSQ=0.9938;ERATE=0.0007;THETA=0.0003;AC=978;AN=2184 GT:DS:GL:BD 0.44780219 0
1 186974332 . GA G 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186974350 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186974363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.6950;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186974365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4475;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=978;AN=2184 GT:DS:GL:BD 0.44780219 0
1 186974438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9419;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186974444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0724;AVGPOST=0.9994;RSQ=0.9959;ERATE=0.0002;THETA=0.0004;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 186974549 . AAAAT A 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.3720;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186974560 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.5992;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186974650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.3721;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186974681 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9845;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186974745 rs57643874 GTATT G 37321 PASS INDEL;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.4390;AVGPOST=0.9650;RSQ=0.9452;ERATE=0.0064;THETA=0.0003;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 186974806 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8291;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186974857 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.4475;AVGPOST=0.9926;RSQ=0.9873;ERATE=0.0014;THETA=0.0004;AC=978;AN=2184 GT:DS:GL:BD 0.44780219 0
1 186974966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186974997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9311;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186975014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8055;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186975023 . G GA 93 PASS INDEL;BAVGPOST=0.998;BRSQ=0.637;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.5880;ERATE=0.0005;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186975072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1975;AVGPOST=0.9981;RSQ=0.9953;ERATE=0.0004;THETA=0.0006;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 186975218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0021;AVGPOST=0.9970;RSQ=0.5548;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186975225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186975238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9775;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186975336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6483;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 186975360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9987;RSQ=0.4825;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186975412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7277;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186975413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9522;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186975460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0090;AVGPOST=0.9996;RSQ=0.9820;ERATE=0.0002;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186975613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8943;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186975623 . AC A 921 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0091;AVGPOST=0.9997;RSQ=0.9845;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186975643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9821;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186975690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6813;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186975692 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.837;LDAF=0.0109;AVGPOST=0.9951;RSQ=0.8179;ERATE=0.0006;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186975705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0072;AVGPOST=0.9991;RSQ=0.9461;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186975715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9442;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186975753 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186975780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186975794 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1975;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 186975799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6816;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186975810 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5537;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186975813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186976085 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7564;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=1652;AN=2184 GT:DS:GL:BD 0.75641024 1
1 186976114 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0043;AVGPOST=0.9980;RSQ=0.8444;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186976143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6635;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186976191 . CT C 376 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.9179;ERATE=0.0002;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186976197 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7506;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186976199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0096;AVGPOST=0.9976;RSQ=0.9209;ERATE=0.0002;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186976221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4824;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186976263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186976378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186976480 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186976530 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4932;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186976582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6538;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=1428;AN=2184 GT:DS:GL:BD 0.65384614 1
1 186976635 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186976754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186976788 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8193;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186976793 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9502;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186976937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7096;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186976962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9719;ERATE=0.0003;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186977050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8216;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186977086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4648;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0006;THETA=0.0005;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 186977176 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186977245 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4485;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 186977291 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0078;AVGPOST=0.9982;RSQ=0.9050;ERATE=0.0004;THETA=0.0001;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186977424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4014;AVGPOST=0.9955;RSQ=0.9931;ERATE=0.0008;THETA=0.0003;AC=878;AN=2184 GT:DS:GL:BD 0.40201464 0
1 186977428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8845;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186977460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6825;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186977511 . CT C 752 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0118;AVGPOST=0.9989;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186977656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4021;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=878;AN=2184 GT:DS:GL:BD 0.40201464 0
1 186977697 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0049;AVGPOST=0.9966;RSQ=0.7238;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186977818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2057;AVGPOST=0.9974;RSQ=0.9935;ERATE=0.0006;THETA=0.0003;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 186977869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5528;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186977919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7720;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186977928 . A AATGTCACT 1111 PASS INDEL;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8594;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186977984 . AG A 230 PASS INDEL;BAVGPOST=0.997;BRSQ=0.826;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8744;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186978016 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7924;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186978078 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0193;AVGPOST=0.9982;RSQ=0.9643;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 186978141 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6640;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186978144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9672;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186978224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186978305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186978377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.977;LDAF=0.7503;AVGPOST=0.9902;RSQ=0.9823;ERATE=0.0019;THETA=0.0003;AC=1645;AN=2184 GT:DS:GL:BD 0.75320512 1
1 186978379 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186978458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5954;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186978468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9885;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 186978545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9705;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186978577 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0733;AVGPOST=0.9981;RSQ=0.9893;ERATE=0.0004;THETA=0.0002;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 186978601 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9658;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186978626 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9262;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186978683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9390;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186978773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186978779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9297;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186978971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.801;LDAF=0.0114;AVGPOST=0.9943;RSQ=0.8014;ERATE=0.0005;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186978979 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9388;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186978999 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.563;LDAF=0.0117;AVGPOST=0.9854;RSQ=0.5322;ERATE=0.0035;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186979071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9304;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186979152 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4990;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186979193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9818;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186979340 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8610;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186979346 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9112;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186979406 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.7574;AVGPOST=0.9972;RSQ=0.9943;ERATE=0.0006;THETA=0.0004;AC=1654;AN=2184 GT:DS:GL:BD 0.75732601 1
1 186979409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6439;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186979416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186979424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7928;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186979442 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4573;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0005;THETA=0.0005;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 186979519 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186979543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186979557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0223;AVGPOST=0.9988;RSQ=0.9815;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 186979690 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8456;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186979700 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7162;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186979850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7008;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186980030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186980102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186980137 rs75091067 C CCTT 98006 PASS INDEL;BAVGPOST=0.973;BRSQ=0.950;LDAF=0.6517;AVGPOST=0.9852;RSQ=0.9755;ERATE=0.0005;THETA=0.0003;AC=1433;AN=2184 GT:DS:GL:BD 0.65613556 1
1 186980138 . C CTTA 34435 PASS INDEL;BAVGPOST=0.973;BRSQ=0.950;LDAF=0.6522;AVGPOST=0.9856;RSQ=0.9761;ERATE=0.0004;THETA=0.0004;AC=1433;AN=2184 GT:DS:GL:BD 0.65613556 1
1 186980139 . T TTCC 51770 PASS INDEL;BAVGPOST=0.957;BRSQ=0.924;LDAF=0.6282;AVGPOST=0.9429;RSQ=0.9135;ERATE=0.0135;THETA=0.0003;AC=1400;AN=2184 GT:DS:GL:BD 0.64102566 1
1 186980654 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0038;AVGPOST=0.9963;RSQ=0.6413;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186980669 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3408;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186980741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8708;ERATE=0.0006;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186980746 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186980769 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1761;AVGPOST=0.9982;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 186980818 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1750;AVGPOST=0.9973;RSQ=0.9926;ERATE=0.0005;THETA=0.0004;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 186980840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186980965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9301;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186981044 . CT C 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0038;AVGPOST=0.9972;RSQ=0.6977;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186981182 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186981198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7099;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186981259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8686;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186981298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5817;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186981339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4571;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 186981342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186981353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1879;AVGPOST=0.9974;RSQ=0.9935;ERATE=0.0002;THETA=0.0004;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 186981517 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0033;AVGPOST=0.9983;RSQ=0.7983;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186981541 . T TA 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4446;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186981661 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186981691 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186981709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.569;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5863;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186981779 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.4667;AVGPOST=0.9959;RSQ=0.9926;ERATE=0.0007;THETA=0.0003;AC=1022;AN=2184 GT:DS:GL:BD 0.46794870 0
1 186981791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186981800 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7554;AVGPOST=0.9983;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=1651;AN=2184 GT:DS:GL:BD 0.75595236 1
1 186981923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9886;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186981993 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186982020 . TTTG T 543 PASS INDEL;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0138;AVGPOST=0.9906;RSQ=0.7348;ERATE=0.0014;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186982061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8358;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186982073 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7570;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186982286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0184;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0003;THETA=0.0001;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 186982375 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186982383 . GA G 568 PASS INDEL;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0100;AVGPOST=0.9983;RSQ=0.9255;ERATE=0.0006;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186982544 . ATTGTT A 428 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0106;AVGPOST=0.9977;RSQ=0.9164;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186982545 . TTGTTTC T 1125 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0083;AVGPOST=0.9995;RSQ=0.9699;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186982554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0082;AVGPOST=0.9995;RSQ=0.9725;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186982672 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186982758 . AT A 2415 PASS INDEL;BAVGPOST=0.984;BRSQ=0.840;LDAF=0.0346;AVGPOST=0.9908;RSQ=0.8922;ERATE=0.0009;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 186982819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186982863 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9994;RSQ=0.9675;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186982870 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0107;AVGPOST=0.9994;RSQ=0.9792;ERATE=0.0002;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186982871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0058;AVGPOST=0.9983;RSQ=0.8717;ERATE=0.0008;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186982922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186982931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4496;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0006;THETA=0.0003;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 186982979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186983148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6258;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186983160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0002;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186983231 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186983312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9559;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186983323 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186983395 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4731;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=1034;AN=2184 GT:DS:GL:BD 0.47344321 0
1 186983452 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.6688;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186983462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0257;AVGPOST=0.9975;RSQ=0.9574;ERATE=0.0003;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 186983482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186983545 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186983548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0092;AVGPOST=0.9985;RSQ=0.9374;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186983549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7340;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186983621 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0058;AVGPOST=0.9979;RSQ=0.8629;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186983651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6951;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186983718 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186983752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9889;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186983885 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186983938 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.449;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4195;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186984081 . GGT G 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5628;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186984091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0185;AVGPOST=0.9996;RSQ=0.9892;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 186984113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6737;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186984150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186984157 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0092;AVGPOST=0.9990;RSQ=0.9549;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186984283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1960;AVGPOST=0.9963;RSQ=0.9895;ERATE=0.0007;THETA=0.0003;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 186984300 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9552;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186984371 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7267;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186984419 . TTATA T 287 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5132;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186984423 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0081;AVGPOST=0.9973;RSQ=0.8785;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186984544 . CAA C 1564 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9735;ERATE=0.0003;THETA=0.0001;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 186984566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0041;AVGPOST=0.9985;RSQ=0.8588;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186984612 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9832;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186984748 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0093;AVGPOST=0.9987;RSQ=0.9567;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186984760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186984812 . T TG 1176 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0084;AVGPOST=0.9988;RSQ=0.9447;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186984846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186984853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9666;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186984863 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0050;AVGPOST=0.9988;RSQ=0.8971;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186984877 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7937;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186984912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6725;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186984953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5846;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186984989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186985019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9997;RSQ=0.9819;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186985039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4733;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0005;THETA=0.0004;AC=1034;AN=2184 GT:DS:GL:BD 0.47344321 0
1 186985052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.886;LDAF=0.0098;AVGPOST=0.9978;RSQ=0.9180;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186985129 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0002;THETA=0.0001;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186985141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4730;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0005;THETA=0.0006;AC=1034;AN=2184 GT:DS:GL:BD 0.47344321 0
1 186985167 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186985230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9681;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186985326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9127;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186985374 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9915;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186985444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.885;LDAF=0.0208;AVGPOST=0.9973;RSQ=0.9437;ERATE=0.0004;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 186985553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9669;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186985595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186985617 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1971;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 186985710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1968;AVGPOST=0.9963;RSQ=0.9910;ERATE=0.0006;THETA=0.0006;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 186985752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0118;AVGPOST=0.9984;RSQ=0.9494;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 186985854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7941;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186985894 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5018;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186985953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0043;AVGPOST=0.9963;RSQ=0.6872;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186986034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9696;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186986065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9833;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186986087 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0068;AVGPOST=0.9982;RSQ=0.8905;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186986283 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5894;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186986289 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186986383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5874;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186986516 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.8062;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186986594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9996;RSQ=0.9454;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186986609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9844;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186986636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7031;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186986646 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186986653 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8989;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186986700 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8160;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186986701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0002;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186986807 . A AG 1621 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9671;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186986812 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1970;AVGPOST=0.9993;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 186986846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9542;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186986885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186986891 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6688;AVGPOST=0.9955;RSQ=0.9920;ERATE=0.0008;THETA=0.0006;AC=1463;AN=2184 GT:DS:GL:BD 0.66987181 1
1 186986910 rs112080939 AC A 16319 PASS INDEL;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2056;AVGPOST=0.9963;RSQ=0.9895;ERATE=0.0003;THETA=0.0005;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 186987091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7447;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186987097 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0050;AVGPOST=0.9996;RSQ=0.9660;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186987107 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8740;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186987142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186987237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4098;AVGPOST=0.9948;RSQ=0.9912;ERATE=0.0010;THETA=0.0005;AC=895;AN=2184 GT:DS:GL:BD 0.40979853 0
1 186987245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9562;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186987293 . TG T 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8211;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186987337 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9866;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 186987430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7822;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186987504 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9757;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186987516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9742;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186987550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186987554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0745;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 186987568 . C CA 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186987624 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5207;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186987653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186987728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9832;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186987747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8808;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186987783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9478;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186987925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.8986;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186987929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8435;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186987999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.918;LDAF=0.0213;AVGPOST=0.9962;RSQ=0.9305;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 186988008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1970;AVGPOST=0.9966;RSQ=0.9915;ERATE=0.0006;THETA=0.0004;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 186988130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0050;AVGPOST=0.9987;RSQ=0.8834;ERATE=0.0004;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186988273 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9655;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186988350 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9618;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186988378 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9992;RSQ=0.9247;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186988383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9644;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186988411 . AATG A 139 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7895;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186988503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186988528 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186988534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0095;AVGPOST=0.9975;RSQ=0.8875;ERATE=0.0007;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186988535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9632;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186988586 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9736;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186988596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9377;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186988621 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6356;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186988649 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6180;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186988789 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9992;RSQ=0.9470;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186988844 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0231;AVGPOST=0.9976;RSQ=0.9601;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 186988884 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9833;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186988914 . A AG 1886 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9730;ERATE=0.0002;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186988949 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0035;AVGPOST=0.9997;RSQ=0.9612;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186988977 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186989001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9195;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186989016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186989027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9390;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186989048 . TG T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5522;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186989055 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186989083 . AGGCTAT A 137 PASS INDEL;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8872;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186989200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5917;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186989240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186989250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9859;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186989318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186989319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186989344 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186989360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9876;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 186989397 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0002;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186989413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0092;AVGPOST=0.9996;RSQ=0.9785;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186989418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186989460 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8261;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186989487 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8125;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186989540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0163;AVGPOST=0.9995;RSQ=0.9853;ERATE=0.0002;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 186989612 . GA G 260 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0058;AVGPOST=0.9964;RSQ=0.7855;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186989698 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9698;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186989709 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8201;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186989727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0141;AVGPOST=0.9975;RSQ=0.9322;ERATE=0.0004;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 186989751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186989769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9754;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186989828 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6999;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186989830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5542;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186989930 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9669;ERATE=0.0002;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186990022 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0002;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186990087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4788;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186990090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7633;AVGPOST=0.9970;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=1667;AN=2184 GT:DS:GL:BD 0.76327837 1
1 186990160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186990307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6918;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186990398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6895;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186990420 . GA G 143 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186990503 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186990533 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5510;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186990550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186990557 . AAAGAG A 950 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0111;AVGPOST=0.9996;RSQ=0.9822;ERATE=0.0004;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 186990725 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186990881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186990886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186990916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.864;LDAF=0.0257;AVGPOST=0.9888;RSQ=0.8257;ERATE=0.0005;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 186990930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7505;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186990934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8340;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186990984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0002;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186990992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186990998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0095;AVGPOST=0.9968;RSQ=0.8867;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186991045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186991103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.8130;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186991213 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186991225 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4652;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0005;THETA=0.0005;AC=1017;AN=2184 GT:DS:GL:BD 0.46565935 0
1 186991261 . TA T 153 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186991288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186991312 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0080;AVGPOST=0.9959;RSQ=0.8113;ERATE=0.0007;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 186991347 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4567;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0007;THETA=0.0003;AC=998;AN=2184 GT:DS:GL:BD 0.45695969 0
1 186991352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0163;AVGPOST=0.9985;RSQ=0.9691;ERATE=0.0002;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 186991486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0085;AVGPOST=0.9993;RSQ=0.9598;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 186991539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186991590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1882;AVGPOST=0.9972;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 186991619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186991628 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186991642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9294;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186991711 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8148;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186991768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4654;AVGPOST=0.9972;RSQ=0.9951;ERATE=0.0006;THETA=0.0002;AC=1017;AN=2184 GT:DS:GL:BD 0.46565935 0
1 186991802 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1878;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0002;THETA=0.0003;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 186991829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8228;ERATE=0.0009;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186991833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186991927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8303;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186992050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0064;AVGPOST=0.9994;RSQ=0.9620;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 186992154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0097;AVGPOST=0.9986;RSQ=0.9512;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186992179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8455;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186992252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186992276 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0456;AVGPOST=0.9989;RSQ=0.9896;ERATE=0.0002;THETA=0.0003;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 186992377 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4553;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0006;THETA=0.0003;AC=996;AN=2184 GT:DS:GL:BD 0.45604396 0
1 186992441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186992555 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186992594 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4816;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186992650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186992698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186992838 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0041;AVGPOST=0.9964;RSQ=0.6889;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186992856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0088;AVGPOST=0.9991;RSQ=0.9616;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186992878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.969;LDAF=0.4460;AVGPOST=0.9782;RSQ=0.9660;ERATE=0.0051;THETA=0.0004;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 186993031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5628;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186993041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8092;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186993053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0181;AVGPOST=0.9991;RSQ=0.9754;ERATE=0.0004;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 186993138 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186993182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5166;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186993189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0783;AVGPOST=0.9967;RSQ=0.9835;ERATE=0.0004;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 186993218 . CAT C 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186993452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0223;AVGPOST=0.9972;RSQ=0.9470;ERATE=0.0004;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 186993476 . C CA 56 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.8035;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186993555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8429;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186993591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186993627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0092;AVGPOST=0.9989;RSQ=0.9519;ERATE=0.0005;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186993655 . AG A 277 PASS INDEL;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0050;AVGPOST=0.9980;RSQ=0.8583;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186993670 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6110;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186993683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6256;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186993704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4555;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=997;AN=2184 GT:DS:GL:BD 0.45650184 0
1 186993711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.6838;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186993778 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8545;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186993800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4562;AVGPOST=0.9958;RSQ=0.9932;ERATE=0.0003;THETA=0.0006;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 186993838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0182;AVGPOST=0.9989;RSQ=0.9764;ERATE=0.0002;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 186993908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0096;AVGPOST=0.9986;RSQ=0.9463;ERATE=0.0002;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186993948 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9996;RSQ=0.9763;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186994105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7895;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186994129 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186994135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186994227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0093;AVGPOST=0.9992;RSQ=0.9639;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 186994287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0073;AVGPOST=0.9985;RSQ=0.9096;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186994385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.8095;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186994397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186994403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186994406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8381;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186994438 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186994456 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.7309;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186994494 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7363;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186994585 . GTC G 175 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8262;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186994624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0182;AVGPOST=0.9991;RSQ=0.9758;ERATE=0.0004;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 186994662 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186994755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4014;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186994913 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186994969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5450;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186994983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4880;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186995039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.7992;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186995336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0076;AVGPOST=0.9989;RSQ=0.9410;ERATE=0.0006;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186995337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7388;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186995446 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0047;AVGPOST=0.9966;RSQ=0.7142;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186995482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5858;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186995634 . T TA 106 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7592;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186995637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0149;AVGPOST=0.9968;RSQ=0.9167;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 186995761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186995870 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6696;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186995911 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0291;AVGPOST=0.9995;RSQ=0.9920;ERATE=0.0002;THETA=0.0018;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 186995942 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186995946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186996020 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9603;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186996176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186996214 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9867;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186996285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0086;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0002;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186996331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0587;AVGPOST=0.9994;RSQ=0.9949;ERATE=0.0003;THETA=0.0006;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 186996372 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186996376 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9995;RSQ=0.9686;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186996400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4581;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186996443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8015;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186996480 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9151;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 186996507 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9574;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186996555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186996686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0096;AVGPOST=0.9998;RSQ=0.9910;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 186996785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8068;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186996815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7553;AVGPOST=0.9977;RSQ=0.9953;ERATE=0.0006;THETA=0.0004;AC=1652;AN=2184 GT:DS:GL:BD 0.75641024 1
1 186996825 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7297;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186996830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7558;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=1652;AN=2184 GT:DS:GL:BD 0.75641024 1
1 186996840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 186996853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1994;AVGPOST=0.9949;RSQ=0.9872;ERATE=0.0011;THETA=0.0002;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 186996854 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186996859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7617;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186996999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9889;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 186997301 . A AC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186997464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0095;AVGPOST=0.9971;RSQ=0.8716;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 186997475 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0050;AVGPOST=0.9986;RSQ=0.9011;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186997600 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4104;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0005;THETA=0.0004;AC=897;AN=2184 GT:DS:GL:BD 0.41071430 0
1 186997665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186997730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186997880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9473;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 186997935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9103;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 186997981 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9630;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186998009 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186998134 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186998248 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0180;AVGPOST=0.9997;RSQ=0.9926;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 186998282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8349;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186998288 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186998366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1983;AVGPOST=0.9977;RSQ=0.9938;ERATE=0.0003;THETA=0.0002;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 186998479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186998512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186998545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6338;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186998656 . A AC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186998659 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5929;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186998776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186998821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186998843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7620;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=1664;AN=2184 GT:DS:GL:BD 0.76190478 1
1 186998939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4778;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186999005 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8749;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186999079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0002;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 186999158 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=0.9999;RSQ=0.9913;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 186999164 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7327;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186999230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186999271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186999291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0052;AVGPOST=0.9983;RSQ=0.8774;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 186999296 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.877;LDAF=0.0194;AVGPOST=0.9955;RSQ=0.9051;ERATE=0.0004;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 186999324 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7618;AVGPOST=0.9971;RSQ=0.9949;ERATE=0.0006;THETA=0.0003;AC=1665;AN=2184 GT:DS:GL:BD 0.76236266 1
1 186999528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8608;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 186999604 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.7635;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=1668;AN=2184 GT:DS:GL:BD 0.76373625 1
1 186999629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0002;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186999657 . C CA 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4444;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 186999696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8779;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 186999712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 186999811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9288;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 186999824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.8136;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 186999852 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7147;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 186999859 . TTTTTG T 225 PASS INDEL;BAVGPOST=0.995;BRSQ=0.601;LDAF=0.0126;AVGPOST=0.9885;RSQ=0.6085;ERATE=0.0024;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 186999907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0697;AVGPOST=0.9971;RSQ=0.9819;ERATE=0.0003;THETA=0.0004;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 186999939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0108;AVGPOST=0.9990;RSQ=0.9647;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 187000047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1023;AVGPOST=0.9982;RSQ=0.9930;ERATE=0.0004;THETA=0.0004;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 187000073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0073;AVGPOST=0.9996;RSQ=0.9731;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187000074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0114;AVGPOST=0.9986;RSQ=0.9553;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187000467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.7633;AVGPOST=0.9983;RSQ=0.9964;ERATE=0.0006;THETA=0.0004;AC=1668;AN=2184 GT:DS:GL:BD 0.76373625 1
1 187000548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4509;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187000583 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0117;AVGPOST=0.9972;RSQ=0.9125;ERATE=0.0005;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 187000619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.8876;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187000790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8310;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187000917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9814;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187000959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187000965 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187000992 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0043;AVGPOST=0.9967;RSQ=0.7185;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187001113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9122;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187001203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1777;AVGPOST=0.9966;RSQ=0.9897;ERATE=0.0005;THETA=0.0002;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 187001236 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.934;LDAF=0.0309;AVGPOST=0.9949;RSQ=0.9396;ERATE=0.0003;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 187001256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2987;AVGPOST=0.9982;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 187001494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6188;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187001519 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187001819 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187001852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8801;ERATE=0.0021;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187001880 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7632;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=1668;AN=2184 GT:DS:GL:BD 0.76373625 1
1 187001905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0054;AVGPOST=0.9985;RSQ=0.9137;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187001953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187001980 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187001991 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187002035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.7360;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187002043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187002047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5542;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187002091 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9235;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187002199 . GT G 65 PASS INDEL;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8275;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187002203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187002205 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7194;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187002241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8395;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187002291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6537;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187002368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187002406 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187002419 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4104;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=897;AN=2184 GT:DS:GL:BD 0.41071430 0
1 187002684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187002733 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9602;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187002745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187003004 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4384;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187003080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8812;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187003092 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.905;LDAF=0.0193;AVGPOST=0.9963;RSQ=0.9222;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 187003113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8256;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187003289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9813;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187003322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187003335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7655;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187003352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7105;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187003491 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187003504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0074;AVGPOST=0.9979;RSQ=0.8948;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187003522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187003524 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187003559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7492;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187003692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0111;AVGPOST=0.9996;RSQ=0.9845;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187003769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187003770 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9617;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187003799 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1882;AVGPOST=0.9981;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 187003895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0038;AVGPOST=0.9974;RSQ=0.7560;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187004153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5438;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187004168 . ATC A 492 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0072;AVGPOST=0.9989;RSQ=0.9298;ERATE=0.0006;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187004175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187004179 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9996;RSQ=0.9888;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 187004267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0078;AVGPOST=0.9994;RSQ=0.9621;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187004416 . A AG 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.572;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7044;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187004450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9169;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187004756 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187004772 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8728;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187004780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7258;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187004793 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9361;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187004832 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1973;AVGPOST=0.9986;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 187004841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9799;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187004890 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187004947 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1758;AVGPOST=0.9983;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 187004975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6589;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187005003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187005063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7338;AVGPOST=0.9967;RSQ=0.9940;ERATE=0.0007;THETA=0.0003;AC=1604;AN=2184 GT:DS:GL:BD 0.73443222 1
1 187005253 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4734;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187005290 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1973;AVGPOST=0.9984;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 187005297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187005310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1886;AVGPOST=0.9975;RSQ=0.9942;ERATE=0.0002;THETA=0.0002;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 187005315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7452;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=1629;AN=2184 GT:DS:GL:BD 0.74587911 1
1 187005344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6384;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187005403 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6893;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187005416 . CGT C 111 PASS INDEL;BAVGPOST=0.984;BRSQ=0.639;LDAF=0.0340;AVGPOST=0.9636;RSQ=0.5492;ERATE=0.0176;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 187005417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9581;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187005434 . CGT C 194 PASS INDEL;BAVGPOST=0.990;BRSQ=0.649;LDAF=0.0225;AVGPOST=0.9744;RSQ=0.5398;ERATE=0.0091;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 187005490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187005535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9730;ERATE=0.0002;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 187005558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9448;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187005560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7687;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187005569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0039;AVGPOST=0.9954;RSQ=0.5388;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187005625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9032;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187005635 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5366;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187005663 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9667;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187005676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0189;AVGPOST=0.9979;RSQ=0.9527;ERATE=0.0004;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 187005700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.6203;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187005749 . G GA 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6585;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187005793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187005943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0078;AVGPOST=0.9972;RSQ=0.8840;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187005970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6443;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187005977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7624;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187006068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187006081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.8164;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187006122 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0085;AVGPOST=0.9984;RSQ=0.9375;ERATE=0.0003;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187006138 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8680;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187006297 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0125;AVGPOST=0.9986;RSQ=0.9532;ERATE=0.0005;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 187006313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0054;AVGPOST=0.9985;RSQ=0.9036;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187006339 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187006408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7901;ERATE=0.0019;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187006477 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187006675 . T TA 334 PASS INDEL;BAVGPOST=0.996;BRSQ=0.707;LDAF=0.0077;AVGPOST=0.9944;RSQ=0.7053;ERATE=0.0012;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187006718 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187006848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9402;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187006876 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7631;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0004;THETA=0.0007;AC=1668;AN=2184 GT:DS:GL:BD 0.76373625 1
1 187006891 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6223;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187006915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5928;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187006940 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0594;AVGPOST=0.9979;RSQ=0.9839;ERATE=0.0003;THETA=0.0004;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 187007046 rs5779317 AC A 42782 PASS INDEL;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.4081;AVGPOST=0.9963;RSQ=0.9935;ERATE=0.0008;THETA=0.0004;AC=894;AN=2184 GT:DS:GL:BD 0.40934065 0
1 187007175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187007181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1762;AVGPOST=0.9984;RSQ=0.9950;ERATE=0.0005;THETA=0.0005;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 187007257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6710;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187007314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0052;AVGPOST=0.9983;RSQ=0.8507;ERATE=0.0008;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187007398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9379;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187007403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9729;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187007418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0097;AVGPOST=0.9993;RSQ=0.9662;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 187007506 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8196;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187007524 . A AG 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5529;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187007545 . TC T 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187007849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187007929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187008018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9672;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187008029 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187008049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187008244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187008265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0040;AVGPOST=0.9981;RSQ=0.8448;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187008331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7270;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187008349 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187008444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.790;LDAF=0.0048;AVGPOST=0.9978;RSQ=0.8203;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187008467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187008619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9734;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187008763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187008772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187008773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9105;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187008774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8938;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187008787 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9542;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187009062 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0039;AVGPOST=0.9968;RSQ=0.7170;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187009119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7288;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187009177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.3858;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187009197 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.7904;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187009533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187009625 . TG T 228 PASS INDEL;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0069;AVGPOST=0.9957;RSQ=0.7799;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187009699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0059;AVGPOST=0.9975;RSQ=0.8310;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187009869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0032;AVGPOST=0.9966;RSQ=0.5825;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187009870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8516;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187009880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0119;AVGPOST=0.9987;RSQ=0.9555;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 187010127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8663;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187010178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5874;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187010186 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0167;AVGPOST=0.9987;RSQ=0.9736;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 187010260 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8852;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187010300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0171;AVGPOST=0.9978;RSQ=0.9627;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 187010334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.971;LDAF=0.1750;AVGPOST=0.9952;RSQ=0.9865;ERATE=0.0007;THETA=0.0006;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 187010335 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8769;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187010361 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4084;AVGPOST=0.9966;RSQ=0.9940;ERATE=0.0006;THETA=0.0003;AC=894;AN=2184 GT:DS:GL:BD 0.40934065 0
1 187010437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.8112;ERATE=0.0006;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187010599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187010631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7103;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187010659 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5494;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187010828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0036;AVGPOST=0.9955;RSQ=0.4696;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187010829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0092;AVGPOST=0.9963;RSQ=0.8410;ERATE=0.0008;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 187010842 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.539;LDAF=0.0036;AVGPOST=0.9968;RSQ=0.6225;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187010915 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187010964 . A AT 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3669;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187011039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0197;AVGPOST=0.9958;RSQ=0.9254;ERATE=0.0004;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 187011099 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.877;LDAF=0.3845;AVGPOST=0.9086;RSQ=0.8553;ERATE=0.0152;THETA=0.0005;AC=834;AN=2184 GT:DS:GL:BD 0.38186812 0
1 187011101 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.881;BRSQ=0.778;LDAF=0.5433;AVGPOST=0.8364;RSQ=0.7425;ERATE=0.0477;THETA=0.0003;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 187011103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.899;LDAF=0.3569;AVGPOST=0.9042;RSQ=0.8448;ERATE=0.0158;THETA=0.0003;AC=775;AN=2184 GT:DS:GL:BD 0.35485348 0
1 187011162 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9976;RSQ=0.8185;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187011264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9301;ERATE=0.0006;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187011285 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0106;AVGPOST=0.9995;RSQ=0.9801;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 187011417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7633;AVGPOST=0.9968;RSQ=0.9933;ERATE=0.0006;THETA=0.0003;AC=1668;AN=2184 GT:DS:GL:BD 0.76373625 1
1 187011512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9821;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187011547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0067;AVGPOST=0.9985;RSQ=0.9188;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187011564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0091;AVGPOST=0.9989;RSQ=0.9638;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 187011566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.938;LDAF=0.0223;AVGPOST=0.9961;RSQ=0.9303;ERATE=0.0003;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187011683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187011696 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5192;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187011706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6157;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187011722 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187012162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0113;AVGPOST=0.9989;RSQ=0.9538;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187012173 . AT A 2426 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0189;AVGPOST=0.9977;RSQ=0.9509;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 187012175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187012203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2205;AVGPOST=0.9954;RSQ=0.9886;ERATE=0.0005;THETA=0.0004;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 187012218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.7073;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187012233 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.890;LDAF=0.0121;AVGPOST=0.9978;RSQ=0.9242;ERATE=0.0005;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187012321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187012433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187012561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9724;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187012579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0046;AVGPOST=0.9985;RSQ=0.8906;ERATE=0.0002;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187012677 rs71733899 CTCTTCTTCTT C 18065 PASS INDEL;BAVGPOST=0.952;BRSQ=0.839;LDAF=0.1793;AVGPOST=0.9840;RSQ=0.9568;ERATE=0.0012;THETA=0.0002;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 187012694 . T TC 307 PASS INDEL;BAVGPOST=0.967;BRSQ=0.591;LDAF=0.0497;AVGPOST=0.9525;RSQ=0.6204;ERATE=0.0030;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 187012715 rs34756188 TTTC T 18989 PASS INDEL;BAVGPOST=0.960;BRSQ=0.919;LDAF=0.2974;AVGPOST=0.9867;RSQ=0.9746;ERATE=0.0015;THETA=0.0003;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 187012728 . TTCC T 4761 PASS INDEL;BAVGPOST=0.937;BRSQ=0.847;LDAF=0.2595;AVGPOST=0.9218;RSQ=0.8445;ERATE=0.0152;THETA=0.0006;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 187012740 . TTTC T 836 PASS INDEL;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0098;AVGPOST=0.9972;RSQ=0.8832;ERATE=0.0005;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 187012750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5290;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187012753 . TTCC T 145 PASS INDEL;BAVGPOST=0.965;BRSQ=0.262;LDAF=0.0141;AVGPOST=0.9864;RSQ=0.5675;ERATE=0.0013;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187012771 . TTTC T 1941 PASS INDEL;BAVGPOST=0.991;BRSQ=0.847;LDAF=0.0474;AVGPOST=0.9615;RSQ=0.6588;ERATE=0.0085;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 187012777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8880;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187012793 . TTCC T 474 PASS INDEL;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0049;AVGPOST=0.9979;RSQ=0.8213;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187012808 . TTCTTCC T 64 PASS INDEL;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0037;AVGPOST=0.9958;RSQ=0.5615;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187012949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187012961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9182;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187013031 . CCCTTT C 673 PASS INDEL;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0041;AVGPOST=0.9988;RSQ=0.8856;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187013039 . GTC G 354 PASS INDEL;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9267;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187013070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0147;AVGPOST=0.9969;RSQ=0.9238;ERATE=0.0004;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 187013166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187013183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187013184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187013207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187013321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5281;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187013363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187013395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187013422 . CAT C 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6024;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187013504 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7574;AVGPOST=0.9897;RSQ=0.9846;ERATE=0.0005;THETA=0.0004;AC=1650;AN=2184 GT:DS:GL:BD 0.75549453 1
1 187013524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4199;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187013648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4201;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187013679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.868;LDAF=0.0109;AVGPOST=0.9984;RSQ=0.9362;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 187013702 . TC T 96 PASS INDEL;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0036;AVGPOST=0.9974;RSQ=0.7138;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187013709 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9800;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187013915 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7346;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=1606;AN=2184 GT:DS:GL:BD 0.73534799 1
1 187014191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187014240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187014263 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0064;AVGPOST=0.9979;RSQ=0.8839;ERATE=0.0006;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187014268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8569;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187014273 . T TA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187014288 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187014309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7220;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187014335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4092;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0005;THETA=0.0002;AC=894;AN=2184 GT:DS:GL:BD 0.40934065 0
1 187014341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7390;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187014474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9221;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187014504 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8713;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187014505 rs77337749 AT A 12937 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1761;AVGPOST=0.9969;RSQ=0.9903;ERATE=0.0005;THETA=0.0005;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 187014587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187014661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0101;AVGPOST=0.9992;RSQ=0.9649;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 187014694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8618;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187014696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4189;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0006;THETA=0.0004;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 187014802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0163;AVGPOST=0.9964;RSQ=0.9204;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 187014837 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187014940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5413;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187015066 . CT C 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8583;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187015144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0060;AVGPOST=0.9974;RSQ=0.8232;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187015272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9709;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187015297 . G GGA 1322 PASS INDEL;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9752;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187015327 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9777;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187015446 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0777;AVGPOST=0.9984;RSQ=0.9899;ERATE=0.0004;THETA=0.0001;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 187015651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0104;AVGPOST=0.9997;RSQ=0.9903;ERATE=0.0002;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 187015677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1979;AVGPOST=0.9986;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 187015713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0309;AVGPOST=0.9975;RSQ=0.9670;ERATE=0.0003;THETA=0.0011;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 187015766 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0108;AVGPOST=0.9993;RSQ=0.9716;ERATE=0.0002;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 187016091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8475;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187016153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0080;AVGPOST=0.9982;RSQ=0.9058;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187016166 rs34430818 CA C 43983 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4101;AVGPOST=0.9954;RSQ=0.9923;ERATE=0.0006;THETA=0.0009;AC=895;AN=2184 GT:DS:GL:BD 0.40979853 0
1 187016339 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8047;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187016341 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5463;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187016417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9870;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187016459 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187016474 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7332;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0003;THETA=0.0007;AC=1602;AN=2184 GT:DS:GL:BD 0.73351645 1
1 187016478 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1951;AVGPOST=0.9988;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 187016558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187016623 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0160;AVGPOST=0.9997;RSQ=0.9912;ERATE=0.0002;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 187016645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9850;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187016721 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187016850 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9858;ERATE=0.0003;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 187016907 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6259;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187016931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.4819;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187016960 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8196;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187017099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187017223 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9288;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187017234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187017284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9993;RSQ=0.9552;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187017336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7299;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187017444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9386;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187017558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.8103;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187017559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187017580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9426;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187017614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4310;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187017662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7630;AVGPOST=0.9967;RSQ=0.9941;ERATE=0.0004;THETA=0.0003;AC=1669;AN=2184 GT:DS:GL:BD 0.76419413 1
1 187017688 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0104;AVGPOST=0.9987;RSQ=0.9460;ERATE=0.0006;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 187017727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8880;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187017768 . CAA C 158 PASS INDEL;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3613;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187017841 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3939;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187017935 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7515;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187018009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0139;AVGPOST=0.9985;RSQ=0.9557;ERATE=0.0004;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 187018061 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9764;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187018314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6312;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187018414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6302;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187018436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1761;AVGPOST=0.9937;RSQ=0.9809;ERATE=0.0004;THETA=0.0004;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 187018445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0101;AVGPOST=0.9965;RSQ=0.8626;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 187018467 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0181;AVGPOST=0.9995;RSQ=0.9856;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 187018481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7784;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187018621 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187018678 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5308;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187018682 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0002;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187018686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1964;AVGPOST=0.9962;RSQ=0.9902;ERATE=0.0003;THETA=0.0006;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 187018695 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9605;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187018729 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.4984;ERATE=0.0004;THETA=0.0055;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187018732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187018768 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9253;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187018817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0162;AVGPOST=0.9996;RSQ=0.9883;ERATE=0.0004;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 187018918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0184;AVGPOST=0.9996;RSQ=0.9891;ERATE=0.0003;THETA=0.0044;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 187018998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187019199 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9997;RSQ=0.9793;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187019223 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6706;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187019299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0048;AVGPOST=0.9991;RSQ=0.9347;ERATE=0.0002;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187019575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0118;AVGPOST=0.9981;RSQ=0.9273;ERATE=0.0004;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 187019581 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0232;AVGPOST=0.9991;RSQ=0.9828;ERATE=0.0004;THETA=0.0036;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 187019653 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8561;ERATE=0.0005;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187019723 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187019795 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.642;LDAF=0.0052;AVGPOST=0.9922;RSQ=0.3718;ERATE=0.0013;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187019902 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7071;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187019916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5768;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187020197 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9815;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 187020405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0183;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0002;THETA=0.0017;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 187020415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0077;AVGPOST=0.9996;RSQ=0.9814;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187020494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6276;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187020617 . AATAT A 2749 PASS INDEL;BAVGPOST=0.997;BRSQ=0.911;LDAF=0.0161;AVGPOST=0.9996;RSQ=0.9882;ERATE=0.0003;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 187020780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.815;LDAF=0.0174;AVGPOST=0.9932;RSQ=0.8460;ERATE=0.0006;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 187021038 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0002;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187021142 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6568;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187021285 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187021388 . A AAAG 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187021497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8429;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187021564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0240;AVGPOST=0.9987;RSQ=0.9792;ERATE=0.0003;THETA=0.0016;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 187021591 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5678;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187021599 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9081;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187021734 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8926;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187021791 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.951;LDAF=0.0441;AVGPOST=0.9949;RSQ=0.9537;ERATE=0.0003;THETA=0.0028;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 187021794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0070;AVGPOST=0.9988;RSQ=0.9361;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187021866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8517;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187021889 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7986;ERATE=0.0004;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187021892 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9063;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187022137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.856;LDAF=0.0136;AVGPOST=0.9950;RSQ=0.8651;ERATE=0.0005;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 187022162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9510;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187022193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.946;LDAF=0.2002;AVGPOST=0.9714;RSQ=0.9314;ERATE=0.0056;THETA=0.0036;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 187022284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6505;ERATE=0.0003;THETA=0.0064;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187022326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7923;ERATE=0.0003;THETA=0.0042;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187022327 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0032;AVGPOST=0.9964;RSQ=0.4968;ERATE=0.0006;THETA=0.0059;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187022382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5097;ERATE=0.0004;THETA=0.0117;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187022435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.919;LDAF=0.2269;AVGPOST=0.9605;RSQ=0.9174;ERATE=0.0007;THETA=0.0052;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 187022456 rs35324729 C CA 1159 PASS INDEL;BAVGPOST=0.495;BRSQ=0.111;LDAF=0.4433;AVGPOST=0.6068;RSQ=0.2903;ERATE=0.0484;THETA=0.0008;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 187022608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0179;AVGPOST=0.9990;RSQ=0.9792;ERATE=0.0003;THETA=0.0043;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 187022612 . TC T 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4768;ERATE=0.0005;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187022625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0161;AVGPOST=0.9978;RSQ=0.9467;ERATE=0.0003;THETA=0.0009;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 187022950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4826;ERATE=0.0005;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187023030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0039;AVGPOST=0.9982;RSQ=0.8269;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187023094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187023169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0161;AVGPOST=0.9997;RSQ=0.9914;ERATE=0.0002;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 187023366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187023384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187023407 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0182;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0002;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 187023790 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2658;AVGPOST=0.9932;RSQ=0.9868;ERATE=0.0005;THETA=0.0002;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 187023799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187023800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7949;ERATE=0.0010;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187023810 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187024162 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187024411 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9580;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187024462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5817;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187024742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187024825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0248;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0003;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 187024986 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0264;AVGPOST=0.9989;RSQ=0.9808;ERATE=0.0004;THETA=0.0012;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 187025014 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187025070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187025082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187025187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187025395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0271;AVGPOST=0.9993;RSQ=0.9892;ERATE=0.0003;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 187025495 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187025751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.913;LDAF=0.0188;AVGPOST=0.9937;RSQ=0.8759;ERATE=0.0002;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 187025838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3883;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187025843 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187025882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1753;AVGPOST=0.9920;RSQ=0.9797;ERATE=0.0005;THETA=0.0004;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 187025913 . T TTA 571 PASS INDEL;BAVGPOST=0.992;BRSQ=0.667;LDAF=0.0253;AVGPOST=0.9716;RSQ=0.5523;ERATE=0.0031;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 187026030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5361;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187026397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187026516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5614;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187026547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187026574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8595;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187026579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187026677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0248;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 187026990 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9464;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187027096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5378;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187027107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0250;AVGPOST=0.9990;RSQ=0.9826;ERATE=0.0005;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 187027181 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.944;LDAF=0.0390;AVGPOST=0.9968;RSQ=0.9666;ERATE=0.0002;THETA=0.0001;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 187027273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0059;AVGPOST=0.9995;RSQ=0.9660;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187027347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187027353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0247;AVGPOST=0.9996;RSQ=0.9926;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 187027365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.4427;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187027423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2065;AVGPOST=0.9952;RSQ=0.9891;ERATE=0.0005;THETA=0.0003;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 187027433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187027434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1741;AVGPOST=0.9966;RSQ=0.9907;ERATE=0.0004;THETA=0.0002;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 187027564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0263;AVGPOST=0.9992;RSQ=0.9864;ERATE=0.0004;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 187027597 rs4007492 CTT C 24095 PASS INDEL;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2342;AVGPOST=0.9899;RSQ=0.9788;ERATE=0.0019;THETA=0.0007;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 187027686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5767;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187027822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187027969 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0271;AVGPOST=0.9997;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 187028081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6248;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187028164 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9577;ERATE=0.0002;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 187028246 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9763;ERATE=0.0004;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 187028350 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.4797;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187028352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.890;LDAF=0.0151;AVGPOST=0.9960;RSQ=0.8891;ERATE=0.0003;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 187028476 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6456;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187028488 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7923;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187028631 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187028694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9522;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187028740 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187028802 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7541;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187028906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187029089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187029293 rs11313852 AG A 2961 PASS INDEL;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0248;AVGPOST=0.9995;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 187029658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0184;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 187029670 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9789;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 187029771 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0368;AVGPOST=0.9978;RSQ=0.9758;ERATE=0.0003;THETA=0.0008;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 187029825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6943;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187029833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8828;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187029897 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5926;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187029931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0554;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0002;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 187030017 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.7297;ERATE=0.0007;THETA=0.0056;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187030020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7663;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187030109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187030291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7476;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187030437 . G GA 17 PASS INDEL;BAVGPOST=0.999;BRSQ=0.532;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4072;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187030449 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.7620;AVGPOST=0.9888;RSQ=0.9779;ERATE=0.0005;THETA=0.0005;AC=1666;AN=2184 GT:DS:GL:BD 0.76282054 1
1 187030650 . TC T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5062;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187030834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0177;AVGPOST=0.9992;RSQ=0.9799;ERATE=0.0003;THETA=0.0046;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 187030920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187030961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0183;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0002;THETA=0.0028;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 187030997 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7050;ERATE=0.0003;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187031071 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.967;LDAF=0.0507;AVGPOST=0.9950;RSQ=0.9635;ERATE=0.0003;THETA=0.0021;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 187031088 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9401;ERATE=0.0002;THETA=0.0104;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187031118 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9525;ERATE=0.0003;THETA=0.0032;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187031190 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0243;AVGPOST=0.9989;RSQ=0.9818;ERATE=0.0003;THETA=0.0102;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 187031211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1678;AVGPOST=0.9964;RSQ=0.9896;ERATE=0.0005;THETA=0.0109;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 187031213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.7566;AVGPOST=0.9848;RSQ=0.9708;ERATE=0.0044;THETA=0.0003;AC=1656;AN=2184 GT:DS:GL:BD 0.75824177 1
1 187031296 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187031336 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0052;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187031493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9591;ERATE=0.0003;THETA=0.0032;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187031516 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2156;AVGPOST=0.9880;RSQ=0.9734;ERATE=0.0027;THETA=0.0023;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 187031735 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0378;AVGPOST=0.9993;RSQ=0.9912;ERATE=0.0003;THETA=0.0004;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 187031753 . AG A 558 PASS INDEL;BAVGPOST=0.993;BRSQ=0.782;LDAF=0.0190;AVGPOST=0.9911;RSQ=0.8383;ERATE=0.0004;THETA=0.0023;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 187031756 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0306;AVGPOST=0.9876;RSQ=0.8504;ERATE=0.0015;THETA=0.0013;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 187031757 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.2671;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 187031896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6801;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187031908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187031909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0040;AVGPOST=0.9973;RSQ=0.7666;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187032104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4543;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187032137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1706;AVGPOST=0.9979;RSQ=0.9940;ERATE=0.0005;THETA=0.0008;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 187032143 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0203;AVGPOST=0.9995;RSQ=0.9879;ERATE=0.0002;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 187032280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0086;AVGPOST=0.9980;RSQ=0.9025;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187032322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187032362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5062;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187032385 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187032475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187032497 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.565;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5518;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187032534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5711;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187032549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9934;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 187032729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6458;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187032731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.5216;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187032775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9755;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 187032798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4601;ERATE=0.0002;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187032855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5817;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187032882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0250;AVGPOST=0.9994;RSQ=0.9884;ERATE=0.0002;THETA=0.0009;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 187032911 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8048;ERATE=0.0003;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187033016 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.1686;AVGPOST=0.9980;RSQ=0.9930;ERATE=0.0005;THETA=0.0002;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 187033188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0168;AVGPOST=0.9974;RSQ=0.9436;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 187033397 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187033426 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0193;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 187033513 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7817;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187033589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1095;AVGPOST=0.9985;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 187033592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187033609 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0076;AVGPOST=0.9992;RSQ=0.9605;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187033639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8302;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=1815;AN=2184 GT:DS:GL:BD 0.83104396 1
1 187033795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187033813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0052;AVGPOST=0.9993;RSQ=0.9398;ERATE=0.0006;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187033814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187033937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187033946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0379;AVGPOST=0.9992;RSQ=0.9917;ERATE=0.0003;THETA=0.0001;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 187034030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8359;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187034215 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0375;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0002;THETA=0.0004;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 187034243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9208;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187034347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6828;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187034412 . AC A 407 PASS INDEL;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0036;AVGPOST=0.9975;RSQ=0.7011;ERATE=0.0014;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187034510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5020;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187034537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0077;AVGPOST=0.9977;RSQ=0.8877;ERATE=0.0005;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187034588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9821;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 187034615 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0002;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 187034651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2066;AVGPOST=0.9957;RSQ=0.9901;ERATE=0.0003;THETA=0.0003;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 187034700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0374;AVGPOST=0.9990;RSQ=0.9904;ERATE=0.0002;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 187034726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187034866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0239;AVGPOST=0.9989;RSQ=0.9825;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 187035014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7148;ERATE=0.0008;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187035060 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1673;AVGPOST=0.9985;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 187035084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187035094 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8288;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0003;THETA=0.0001;AC=1812;AN=2184 GT:DS:GL:BD 0.82967031 1
1 187035096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0069;AVGPOST=0.9993;RSQ=0.9591;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187035143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187035182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5084;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187035193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 187035267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0177;AVGPOST=0.9993;RSQ=0.9826;ERATE=0.0004;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 187035342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1679;AVGPOST=0.9987;RSQ=0.9957;ERATE=0.0005;THETA=0.0002;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 187035357 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187035397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0505;AVGPOST=0.9966;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 187035401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6411;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187035436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5778;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187035537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6856;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187035559 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4768;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187035644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0184;AVGPOST=0.9988;RSQ=0.9756;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 187035648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1672;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0002;THETA=0.0003;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 187035656 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0839;AVGPOST=0.9993;RSQ=0.9966;ERATE=0.0003;THETA=0.0001;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 187035782 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9582;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187035874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187035882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2193;AVGPOST=0.9963;RSQ=0.9916;ERATE=0.0004;THETA=0.0002;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 187036189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9991;RSQ=0.9179;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187036273 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4116;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187036452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.8043;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187036483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0117;AVGPOST=0.9981;RSQ=0.9320;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187036497 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0030;AVGPOST=0.9961;RSQ=0.4574;ERATE=0.0005;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187036564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0376;AVGPOST=0.9996;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 187036725 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1673;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0004;THETA=0.0006;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 187037008 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6497;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187037033 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187037118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9356;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187037137 . GA G 262 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0034;AVGPOST=0.9976;RSQ=0.7381;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187037144 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2105;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 187037150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0837;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 187037188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6600;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187037211 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1673;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 187037300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187037308 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.794;LDAF=0.0047;AVGPOST=0.9990;RSQ=0.9056;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187037367 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0235;AVGPOST=0.9994;RSQ=0.9888;ERATE=0.0002;THETA=0.0008;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 187037367 . T TA 16 PASS INDEL;BAVGPOST=0.997;BRSQ=0.630;LDAF=0.0042;AVGPOST=0.9950;RSQ=0.4996;ERATE=0.0009;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187037439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9528;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187037592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9113;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187037607 . AC A 2987 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0193;AVGPOST=0.9991;RSQ=0.9785;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 187037665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8515;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187037682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9129;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187037684 . C CT 838 PASS INDEL;BAVGPOST=0.996;BRSQ=0.795;LDAF=0.0091;AVGPOST=0.9966;RSQ=0.8480;ERATE=0.0006;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187037694 . G GT 2764 PASS INDEL;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0239;AVGPOST=0.9956;RSQ=0.9196;ERATE=0.0007;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 187037701 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.4885;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 187037861 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187038001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2614;AVGPOST=0.9962;RSQ=0.9912;ERATE=0.0010;THETA=0.0005;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 187038012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0038;AVGPOST=0.9983;RSQ=0.8434;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187038045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5703;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187038072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8812;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187038456 . A AC 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187038483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0372;AVGPOST=0.9987;RSQ=0.9868;ERATE=0.0003;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 187038519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5956;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187038529 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8545;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187038563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9690;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187038717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.590;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6075;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187038891 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8534;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187038924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7772;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187038949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6804;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187038951 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6227;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187038985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8216;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187039153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5076;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187039409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0066;AVGPOST=0.9982;RSQ=0.9013;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187039464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2345;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 187039601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1700;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0002;THETA=0.0002;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 187039770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2069;AVGPOST=0.9984;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 187039905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9134;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187039934 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187039984 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187040006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.7126;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187040012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9682;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 187040022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187040057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0002;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187040074 . G GT 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187040194 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187040294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0369;AVGPOST=0.9988;RSQ=0.9853;ERATE=0.0005;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 187040504 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0217;AVGPOST=0.9985;RSQ=0.9683;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 187040530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0038;AVGPOST=0.9942;RSQ=0.3444;ERATE=0.0016;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187040668 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.940;LDAF=0.0180;AVGPOST=0.9977;RSQ=0.9429;ERATE=0.0005;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 187040784 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.519;LDAF=0.0022;AVGPOST=0.9963;RSQ=0.3081;ERATE=0.0006;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187040822 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7247;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187040836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187041011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2634;AVGPOST=0.9940;RSQ=0.9869;ERATE=0.0009;THETA=0.0003;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 187041142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187041260 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5092;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187041272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187041399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5162;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187041401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0054;AVGPOST=0.9982;RSQ=0.8738;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187041418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0239;AVGPOST=0.9996;RSQ=0.9934;ERATE=0.0003;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 187041439 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0099;AVGPOST=0.9991;RSQ=0.9586;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 187041448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0098;AVGPOST=0.9992;RSQ=0.9604;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 187041635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0265;AVGPOST=0.9956;RSQ=0.9360;ERATE=0.0005;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 187041726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.1702;AVGPOST=0.9973;RSQ=0.9919;ERATE=0.0005;THETA=0.0005;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 187041827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.969;LDAF=0.2252;AVGPOST=0.9972;RSQ=0.9924;ERATE=0.0005;THETA=0.0002;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 187041844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1063;AVGPOST=0.9977;RSQ=0.9901;ERATE=0.0006;THETA=0.0002;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 187041846 . ATGT A 401 PASS INDEL;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.7886;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187041851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0173;AVGPOST=0.9952;RSQ=0.8901;ERATE=0.0008;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 187041896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.4711;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187042158 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.808;LDAF=0.0288;AVGPOST=0.9943;RSQ=0.9196;ERATE=0.0007;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 187042159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.2085;AVGPOST=0.9959;RSQ=0.9897;ERATE=0.0008;THETA=0.0005;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 187042397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4635;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187042511 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.959;LDAF=0.0811;AVGPOST=0.9957;RSQ=0.9751;ERATE=0.0008;THETA=0.0004;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 187042587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8856;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187042593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5104;ERATE=0.0010;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187042717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6735;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187042903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.4718;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187042943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.645;LDAF=0.0079;AVGPOST=0.9899;RSQ=0.5075;ERATE=0.0010;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187042953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1544;AVGPOST=0.9873;RSQ=0.9617;ERATE=0.0008;THETA=0.0002;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 187043068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0144;AVGPOST=0.9915;RSQ=0.7748;ERATE=0.0005;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187043253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.504;LDAF=0.0149;AVGPOST=0.9858;RSQ=0.6470;ERATE=0.0008;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 187043300 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.822;LDAF=0.0205;AVGPOST=0.9819;RSQ=0.6549;ERATE=0.0004;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 187043301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0072;AVGPOST=0.9943;RSQ=0.6693;ERATE=0.0009;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187043314 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.668;LDAF=0.0141;AVGPOST=0.9878;RSQ=0.6767;ERATE=0.0006;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 187043465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0031;AVGPOST=0.9961;RSQ=0.5920;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187043483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.957;LDAF=0.1549;AVGPOST=0.9972;RSQ=0.9903;ERATE=0.0004;THETA=0.0003;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 187043487 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 187043511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4932;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187043543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.921;LDAF=0.1553;AVGPOST=0.9902;RSQ=0.9711;ERATE=0.0007;THETA=0.0002;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 187043604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1592;AVGPOST=0.9931;RSQ=0.9793;ERATE=0.0009;THETA=0.0003;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 187043676 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6980;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187043702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 187043838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187043853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187043884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0105;AVGPOST=0.9995;RSQ=0.9805;ERATE=0.0002;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 187043930 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7143;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187044229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6567;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187044282 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0002;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 187044333 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1559;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 187044350 . T TCCA 357 PASS INDEL;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7433;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187044374 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1560;AVGPOST=0.9991;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 187044459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187044505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1589;AVGPOST=0.9985;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 187044526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2303;AVGPOST=0.9965;RSQ=0.9917;ERATE=0.0004;THETA=0.0002;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 187044530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187044572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1561;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 187044651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0365;AVGPOST=0.9995;RSQ=0.9949;ERATE=0.0003;THETA=0.0002;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 187044676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9890;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 187044720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9997;RSQ=0.9918;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 187044762 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5164;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187044911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1590;AVGPOST=0.9986;RSQ=0.9951;ERATE=0.0005;THETA=0.0002;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 187044913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7333;AVGPOST=0.9969;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=1601;AN=2184 GT:DS:GL:BD 0.73305863 1
1 187045027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9227;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187045135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4571;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187045153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5202;AVGPOST=0.9957;RSQ=0.9924;ERATE=0.0006;THETA=0.0002;AC=1137;AN=2184 GT:DS:GL:BD 0.52060437 1
1 187045283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 187045330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187045585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8323;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187045664 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187045720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0144;AVGPOST=0.9994;RSQ=0.9824;ERATE=0.0002;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 187045768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9227;ERATE=0.0002;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187045792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1586;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 187045799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0364;AVGPOST=0.9996;RSQ=0.9961;ERATE=0.0002;THETA=0.0002;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 187045812 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0245;AVGPOST=0.9989;RSQ=0.9820;ERATE=0.0002;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 187045878 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1557;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0005;THETA=0.0002;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 187045922 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187045974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187046079 . T TG 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3849;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187046215 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0002;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 187046266 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5418;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187046288 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187046323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5979;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187046368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187046407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5918;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187046502 . T TA 2447 PASS INDEL;BAVGPOST=0.804;BRSQ=0.628;LDAF=0.5659;AVGPOST=0.7559;RSQ=0.6196;ERATE=0.0569;THETA=0.0002;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 187046504 rs35190577 A AT 56510 PASS INDEL;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.7921;AVGPOST=0.9892;RSQ=0.9742;ERATE=0.0008;THETA=0.0002;AC=1734;AN=2184 GT:DS:GL:BD 0.79395604 1
1 187046538 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0229;AVGPOST=0.9991;RSQ=0.9840;ERATE=0.0003;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 187046559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2115;AVGPOST=0.9962;RSQ=0.9905;ERATE=0.0008;THETA=0.0004;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 187046743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.4593;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187046744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.7862;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187046762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9320;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187046856 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0002;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 187046872 . A AG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7367;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187046938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1591;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 187047044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187047118 . A AT 878 PASS INDEL;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0058;AVGPOST=0.9951;RSQ=0.7345;ERATE=0.0006;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187047156 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8309;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187047188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9695;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187047245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9270;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187047262 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1966;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 187047310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187047311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9891;ERATE=0.0002;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 187047323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7393;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187047429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187047530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187047545 . TG T 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6122;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187047613 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0364;AVGPOST=0.9996;RSQ=0.9961;ERATE=0.0002;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 187047645 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8964;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187047662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187047680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187047758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7171;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187047763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187047802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.908;LDAF=0.0318;AVGPOST=0.9932;RSQ=0.9192;ERATE=0.0006;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 187047812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7227;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187048034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.970;LDAF=0.0806;AVGPOST=0.9972;RSQ=0.9846;ERATE=0.0004;THETA=0.0004;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 187048037 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1856;AVGPOST=0.9974;RSQ=0.9935;ERATE=0.0005;THETA=0.0002;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 187048161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0223;AVGPOST=0.9985;RSQ=0.9699;ERATE=0.0003;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 187048162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.924;LDAF=0.0226;AVGPOST=0.9981;RSQ=0.9672;ERATE=0.0004;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 187048170 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187048196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.7849;ERATE=0.0010;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187048212 . C CTAA 210 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7866;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187048318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5104;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187048465 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9626;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187048474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0358;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0002;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 187048480 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187048535 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8308;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187048616 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187048631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8162;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187048688 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6745;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187048700 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0086;AVGPOST=0.9984;RSQ=0.9285;ERATE=0.0002;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 187048726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187048729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0003;THETA=0.0001;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 187048748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.6541;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187048762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0193;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0002;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 187048768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7303;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187048792 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187048797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0175;AVGPOST=0.9991;RSQ=0.9769;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 187049008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187049009 . CTCT C 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187049029 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9771;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187049044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187049076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7166;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187049088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4889;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187049143 . C CA 108 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.6830;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187049294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1832;AVGPOST=0.9974;RSQ=0.9938;ERATE=0.0003;THETA=0.0001;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 187049304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0125;AVGPOST=0.9978;RSQ=0.9284;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 187049451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0100;AVGPOST=0.9982;RSQ=0.9346;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 187049482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9455;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187049539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9599;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187049569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0098;AVGPOST=0.9997;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 187049626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0422;AVGPOST=0.9994;RSQ=0.9932;ERATE=0.0003;THETA=0.0007;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 187049708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0160;AVGPOST=0.9995;RSQ=0.9863;ERATE=0.0002;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 187049709 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1598;AVGPOST=0.9991;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 187049735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9997;RSQ=0.9918;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 187049798 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0840;AVGPOST=0.9992;RSQ=0.9959;ERATE=0.0002;THETA=0.0002;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 187049830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8525;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187049884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8587;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187049896 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9162;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187049964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0231;AVGPOST=0.9995;RSQ=0.9907;ERATE=0.0003;THETA=0.0001;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 187050047 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187050070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7406;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187050150 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1589;AVGPOST=0.9984;RSQ=0.9944;ERATE=0.0005;THETA=0.0002;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 187050203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.7051;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187050237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187050325 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187050327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.9128;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187050585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187050762 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1068;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0007;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 187050828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187050888 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9662;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187050913 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187050983 rs111441290 CCCTCCCTT C 1934 PASS INDEL;BAVGPOST=0.995;BRSQ=0.798;LDAF=0.0144;AVGPOST=0.9981;RSQ=0.9468;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 187051198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187051246 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9991;RSQ=0.9376;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187051532 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7774;AVGPOST=0.9962;RSQ=0.9911;ERATE=0.0003;THETA=0.0042;AC=1697;AN=2184 GT:DS:GL:BD 0.77701467 1
1 187051592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6016;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187051728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0031;AVGPOST=0.9997;RSQ=0.9652;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187051856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8907;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187051876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0158;AVGPOST=0.9990;RSQ=0.9786;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 187051940 . CT C 2467 PASS INDEL;BAVGPOST=0.971;BRSQ=0.914;LDAF=0.1690;AVGPOST=0.9818;RSQ=0.9561;ERATE=0.0004;THETA=0.0004;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 187051941 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.967;LDAF=0.1728;AVGPOST=0.9862;RSQ=0.9687;ERATE=0.0003;THETA=0.0001;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 187051944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.966;LDAF=0.1716;AVGPOST=0.9867;RSQ=0.9695;ERATE=0.0004;THETA=0.0005;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 187051959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187052078 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6983;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187052239 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5882;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187052311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0023;AVGPOST=0.9970;RSQ=0.5074;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187052333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.1819;AVGPOST=0.9969;RSQ=0.9903;ERATE=0.0004;THETA=0.0003;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 187052416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.969;LDAF=0.7193;AVGPOST=0.9617;RSQ=0.9252;ERATE=0.0052;THETA=0.0017;AC=1590;AN=2184 GT:DS:GL:BD 0.72802198 1
1 187052430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0048;AVGPOST=0.9948;RSQ=0.6064;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187052431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.2069;AVGPOST=0.9882;RSQ=0.9719;ERATE=0.0006;THETA=0.0012;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 187052493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6494;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187052501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8360;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187052598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0193;AVGPOST=0.9995;RSQ=0.9873;ERATE=0.0003;THETA=0.0023;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 187052666 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0046;AVGPOST=0.9974;RSQ=0.7816;ERATE=0.0005;THETA=0.0026;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187052775 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0089;AVGPOST=0.9981;RSQ=0.9107;ERATE=0.0002;THETA=0.0013;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 187052784 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.1541;AVGPOST=0.9969;RSQ=0.9897;ERATE=0.0003;THETA=0.0003;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 187052862 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0245;AVGPOST=0.9970;RSQ=0.9518;ERATE=0.0004;THETA=0.0038;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 187052924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5274;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187052972 . GGT G 400 PASS INDEL;BAVGPOST=0.971;BRSQ=0.592;LDAF=0.0603;AVGPOST=0.9330;RSQ=0.5238;ERATE=0.0151;THETA=0.0033;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 187053064 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5051;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187053082 . CA C 142 PASS INDEL;BAVGPOST=0.999;BRSQ=0.559;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6307;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187053092 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0083;AVGPOST=0.9987;RSQ=0.9276;ERATE=0.0004;THETA=0.0023;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187053107 . T TTG 224 PASS INDEL;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.5048;ERATE=0.0003;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187053109 . A ATTGTT 280 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187053110 . C CG 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.4674;ERATE=0.0006;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187053190 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0381;AVGPOST=0.9974;RSQ=0.9726;ERATE=0.0003;THETA=0.0014;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 187053291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0161;AVGPOST=0.9987;RSQ=0.9699;ERATE=0.0004;THETA=0.0034;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 187053307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7885;ERATE=0.0005;THETA=0.0054;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187053493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8806;ERATE=0.0003;THETA=0.0057;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187053557 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.7822;ERATE=0.0013;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187053600 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6019;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187053629 . TA T 91 PASS INDEL;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6602;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187053630 . A AT 795 PASS INDEL;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0161;AVGPOST=0.9979;RSQ=0.9472;ERATE=0.0005;THETA=0.0061;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 187053647 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5650;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187053700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.792;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8791;ERATE=0.0004;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187053779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.977;LDAF=0.1546;AVGPOST=0.9797;RSQ=0.9369;ERATE=0.0008;THETA=0.0162;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 187053791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6772;ERATE=0.0004;THETA=0.0268;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187054114 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.808;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7868;ERATE=0.0005;THETA=0.0133;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187054208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6289;ERATE=0.0003;THETA=0.0236;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187054329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0163;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187054371 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8143;ERATE=0.0003;THETA=0.0085;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187054384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7388;ERATE=0.0002;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187054674 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.6072;ERATE=0.0002;THETA=0.0221;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187054695 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.2186;ERATE=0.0004;THETA=0.0225;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 187054714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0303;AVGPOST=0.9986;RSQ=0.9809;ERATE=0.0003;THETA=0.0075;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 187054789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8603;ERATE=0.0004;THETA=0.0075;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187054805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7386;ERATE=0.0003;THETA=0.0108;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187054897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.6567;AVGPOST=0.9892;RSQ=0.9821;ERATE=0.0004;THETA=0.0007;AC=1437;AN=2184 GT:DS:GL:BD 0.65796703 1
1 187054899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6473;ERATE=0.0002;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187054939 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5112;ERATE=0.0003;THETA=0.0067;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187055040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187055152 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0060;AVGPOST=0.9984;RSQ=0.9078;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187055230 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8031;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187055323 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1658;AVGPOST=0.9965;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 187055436 . GTCTTTCA G 58394 PASS INDEL;BAVGPOST=0.942;BRSQ=0.912;LDAF=0.5576;AVGPOST=0.9130;RSQ=0.8741;ERATE=0.0156;THETA=0.0010;AC=1252;AN=2184 GT:DS:GL:BD 0.57326007 1
1 187055472 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.852;BRSQ=0.778;LDAF=0.4542;AVGPOST=0.8281;RSQ=0.7637;ERATE=0.0318;THETA=0.0019;AC=1032;AN=2184 GT:DS:GL:BD 0.47252747 0
1 187055561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2410;AVGPOST=0.9940;RSQ=0.9886;ERATE=0.0004;THETA=0.0005;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 187055675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187055907 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0070;AVGPOST=0.9986;RSQ=0.9187;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187055930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187055936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9291;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187055953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7478;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187056059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6216;ERATE=0.0004;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187056087 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2568;AVGPOST=0.9955;RSQ=0.9916;ERATE=0.0004;THETA=0.0005;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 187056155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0230;AVGPOST=0.9995;RSQ=0.9890;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 187056237 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8177;ERATE=0.0005;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187056282 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5554;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187056375 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5605;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187056422 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6142;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187056460 . CA C 5159 PASS INDEL;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0379;AVGPOST=0.9987;RSQ=0.9851;ERATE=0.0003;THETA=0.0007;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 187056463 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8415;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187056479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3197;AVGPOST=0.9968;RSQ=0.9946;ERATE=0.0006;THETA=0.0002;AC=698;AN=2184 GT:DS:GL:BD 0.31959707 0
1 187056516 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0002;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187056532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187056632 . TA T 400 PASS INDEL;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0050;AVGPOST=0.9976;RSQ=0.7900;ERATE=0.0005;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187056695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187056744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8736;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187056755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9868;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 187056775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187056895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7873;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187056986 rs72131931 TG T 10046 PASS INDEL;BAVGPOST=0.967;BRSQ=0.874;LDAF=0.1563;AVGPOST=0.9861;RSQ=0.9604;ERATE=0.0003;THETA=0.0005;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 187057011 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0229;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0002;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 187057086 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.631;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6405;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187057115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187057224 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187057284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5970;AVGPOST=0.9946;RSQ=0.9915;ERATE=0.0006;THETA=0.0003;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 187057337 . AT A 25298 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3159;AVGPOST=0.9943;RSQ=0.9890;ERATE=0.0013;THETA=0.0004;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 187057401 . ACTT A 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4291;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187057615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187057636 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1527;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 187057690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187057710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4712;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187057767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7444;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187057773 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187057798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6030;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187057804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.5316;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187057847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4182;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 187057859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4190;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 187057930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7267;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187058201 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187058241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1507;AVGPOST=0.9980;RSQ=0.9938;ERATE=0.0003;THETA=0.0002;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 187058312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9541;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187058417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1669;AVGPOST=0.9982;RSQ=0.9946;ERATE=0.0005;THETA=0.0003;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 187058441 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187058445 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187058449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1504;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0002;THETA=0.0005;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 187058559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7437;ERATE=0.0002;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187058643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187058651 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8533;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187058886 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0051;AVGPOST=0.9985;RSQ=0.8782;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187058924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0094;AVGPOST=0.9984;RSQ=0.9304;ERATE=0.0002;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 187058926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187058929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8080;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187058966 . AT A 1084 PASS INDEL;BAVGPOST=0.958;BRSQ=0.860;LDAF=0.1513;AVGPOST=0.9710;RSQ=0.9262;ERATE=0.0006;THETA=0.0004;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 187058968 rs35508050 TC T 17425 PASS INDEL;BAVGPOST=0.989;BRSQ=0.970;LDAF=0.1777;AVGPOST=0.9962;RSQ=0.9898;ERATE=0.0005;THETA=0.0004;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 187059029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187059041 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9279;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187059090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187059092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9270;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187059111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187059178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1800;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0003;THETA=0.0006;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 187059197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8171;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187059253 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.908;LDAF=0.0227;AVGPOST=0.9962;RSQ=0.9432;ERATE=0.0002;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 187059284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187059285 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.7824;ERATE=0.0002;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187059366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0124;AVGPOST=0.9996;RSQ=0.9882;ERATE=0.0002;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 187059368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0778;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 187059383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0232;AVGPOST=0.9994;RSQ=0.9877;ERATE=0.0003;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 187059586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0800;AVGPOST=0.9983;RSQ=0.9892;ERATE=0.0005;THETA=0.0002;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 187059642 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5258;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187059650 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6702;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187059665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.986;LDAF=0.6011;AVGPOST=0.9836;RSQ=0.9743;ERATE=0.0031;THETA=0.0003;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 187059688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8756;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187059711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0777;AVGPOST=0.9986;RSQ=0.9910;ERATE=0.0004;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 187059772 . CT C 415 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0125;AVGPOST=0.9982;RSQ=0.9379;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 187059807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.1870;AVGPOST=0.9807;RSQ=0.9556;ERATE=0.0021;THETA=0.0003;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 187059817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.967;LDAF=0.0408;AVGPOST=0.9984;RSQ=0.9801;ERATE=0.0005;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 187059835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.1049;AVGPOST=0.9924;RSQ=0.9708;ERATE=0.0005;THETA=0.0005;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 187059841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.3231;AVGPOST=0.9770;RSQ=0.9577;ERATE=0.0026;THETA=0.0002;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 187059945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.463;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4392;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187059948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0053;AVGPOST=0.9958;RSQ=0.6637;ERATE=0.0009;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187059988 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7290;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187060007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2108;AVGPOST=0.9934;RSQ=0.9856;ERATE=0.0006;THETA=0.0006;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 187060020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.882;LDAF=0.0138;AVGPOST=0.9946;RSQ=0.8398;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 187060098 . TTATGCACATG T 131 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187060122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0391;AVGPOST=0.9986;RSQ=0.9852;ERATE=0.0003;THETA=0.0009;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 187060129 . AT A 21195 PASS INDEL;BAVGPOST=0.961;BRSQ=0.896;LDAF=0.7334;AVGPOST=0.9601;RSQ=0.9180;ERATE=0.0020;THETA=0.0001;AC=1623;AN=2184 GT:DS:GL:BD 0.74313188 1
1 187060384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0036;AVGPOST=0.9969;RSQ=0.6842;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187060461 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0395;AVGPOST=0.9997;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 187060512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6104;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187060638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1760;AVGPOST=0.9988;RSQ=0.9963;ERATE=0.0005;THETA=0.0004;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 187060711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.6051;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187060740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6764;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187060741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8430;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187060797 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0391;AVGPOST=0.9977;RSQ=0.9796;ERATE=0.0004;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 187060851 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.489;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7275;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187061048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5163;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187061117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6697;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187061149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1658;AVGPOST=0.9982;RSQ=0.9948;ERATE=0.0004;THETA=0.0002;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 187061303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187061325 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6662;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187061363 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9507;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187061432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1663;AVGPOST=0.9990;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 187061437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0384;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0002;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 187061447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0106;AVGPOST=0.9985;RSQ=0.9426;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 187061474 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187061576 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5917;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187061713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187061735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4625;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187061756 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.821;LDAF=0.0052;AVGPOST=0.9970;RSQ=0.7692;ERATE=0.0013;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187061769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0384;AVGPOST=0.9997;RSQ=0.9961;ERATE=0.0002;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 187062070 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187062115 . TC T 139 PASS INDEL;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187062126 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187062292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1412;AVGPOST=0.9986;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 187062398 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0778;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0001;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 187062493 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187062672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0002;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187062807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6037;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=1320;AN=2184 GT:DS:GL:BD 0.60439563 1
1 187062812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0199;AVGPOST=0.9986;RSQ=0.9725;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 187062969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9705;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187063043 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9342;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187063191 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0128;AVGPOST=0.9985;RSQ=0.9553;ERATE=0.0002;THETA=0.0001;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 187063222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9869;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187063266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0043;AVGPOST=0.9975;RSQ=0.7948;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187063269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1551;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 187063284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4788;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187063353 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0043;AVGPOST=0.9963;RSQ=0.6780;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187063385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.1016;AVGPOST=0.9978;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 187063641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1500;AVGPOST=0.9985;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 187063677 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187063680 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0104;AVGPOST=0.9969;RSQ=0.8775;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 187063870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187063993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8416;AVGPOST=0.9988;RSQ=0.9957;ERATE=0.0002;THETA=0.0003;AC=1838;AN=2184 GT:DS:GL:BD 0.84157509 1
1 187064012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6323;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187064038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6007;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0005;THETA=0.0004;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 187064063 rs71557879 T TA 22255 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1667;AVGPOST=0.9986;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 187064097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7106;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187064237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9129;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187064273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7717;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187064287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4507;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187064411 rs35130071 C CA 190 PASS INDEL;BAVGPOST=0.981;BRSQ=0.530;LDAF=0.0371;AVGPOST=0.9519;RSQ=0.4739;ERATE=0.0090;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 187064419 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.5739;AVGPOST=0.9967;RSQ=0.9942;ERATE=0.0005;THETA=0.0002;AC=1257;AN=2184 GT:DS:GL:BD 0.57554942 1
1 187064461 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8859;ERATE=0.0004;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187064642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187064700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187064711 . TAA T 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187064725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187064731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187064775 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5390;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187064789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8005;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187064804 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0229;AVGPOST=0.9997;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 187064911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.7958;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187064918 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8331;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187064952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9264;ERATE=0.0002;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187064961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5441;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187065104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187065195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187065242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1838;AVGPOST=0.9985;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 187065315 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187065394 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5104;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187065529 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1659;AVGPOST=0.9983;RSQ=0.9947;ERATE=0.0004;THETA=0.0003;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 187065582 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1836;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0001;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 187065595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4238;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187065713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6374;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187065716 . A AC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4797;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187065750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0123;AVGPOST=0.9976;RSQ=0.9218;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 187065794 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8306;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187065965 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0123;AVGPOST=0.9986;RSQ=0.9542;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 187066043 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0306;AVGPOST=0.9994;RSQ=0.9915;ERATE=0.0002;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 187066105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0201;AVGPOST=0.9995;RSQ=0.9900;ERATE=0.0003;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 187066247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187066313 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6991;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187066370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9152;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187066402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7586;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187066405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6009;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 187066485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187066520 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1838;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 187066786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187066811 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.973;LDAF=0.8459;AVGPOST=0.9968;RSQ=0.9889;ERATE=0.0007;THETA=0.0003;AC=1848;AN=2184 GT:DS:GL:BD 0.84615386 1
1 187066838 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0193;AVGPOST=0.9971;RSQ=0.9346;ERATE=0.0007;THETA=0.0001;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 187066848 rs58623102 TA T 51746 PASS INDEL;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.5974;AVGPOST=0.9925;RSQ=0.9875;ERATE=0.0015;THETA=0.0004;AC=1309;AN=2184 GT:DS:GL:BD 0.59935898 1
1 187066912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2518;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0004;THETA=0.0002;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 187066914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187067004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1751;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 187067013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1432;AVGPOST=0.9957;RSQ=0.9887;ERATE=0.0005;THETA=0.0003;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 187067023 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.792;LDAF=0.0039;AVGPOST=0.9993;RSQ=0.9184;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187067470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6954;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187067539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1496;AVGPOST=0.9988;RSQ=0.9963;ERATE=0.0004;THETA=0.0001;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 187067603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 187067659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0317;AVGPOST=0.9991;RSQ=0.9878;ERATE=0.0003;THETA=0.0002;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 187067701 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0072;AVGPOST=0.9973;RSQ=0.8459;ERATE=0.0010;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187067915 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1849;AVGPOST=0.9993;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 187068051 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.871;LDAF=0.0239;AVGPOST=0.9937;RSQ=0.9080;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187068107 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187068130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7031;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187068169 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0385;AVGPOST=0.9996;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 187068199 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1813;AVGPOST=0.9983;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 187068261 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0384;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0002;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 187068326 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9997;AVGPOST=0.9995;RSQ=0.0768;ERATE=0.0003;THETA=0.0002;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 187068423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9411;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187068446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6196;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187068487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.908;LDAF=0.0155;AVGPOST=0.9971;RSQ=0.9253;ERATE=0.0002;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 187068547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7118;ERATE=0.0010;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187068707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8424;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187068858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.2284;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0005;THETA=0.0001;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 187068939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187069084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9667;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187069290 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5257;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187069327 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6908;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187069343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187069360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1551;AVGPOST=0.9985;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 187069419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2293;AVGPOST=0.9980;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 187069439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0081;AVGPOST=0.9980;RSQ=0.8949;ERATE=0.0004;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187069455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0387;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0002;THETA=0.0002;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 187069768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5799;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187069769 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1513;AVGPOST=0.9988;RSQ=0.9958;ERATE=0.0005;THETA=0.0005;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 187070156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0055;AVGPOST=0.9992;RSQ=0.9440;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187070313 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4741;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187070355 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8412;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=1838;AN=2184 GT:DS:GL:BD 0.84157509 1
1 187070421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9568;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187070596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187070637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.2519;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0002;THETA=0.0005;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 187070739 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7286;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187070742 . T TG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4776;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187070821 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.898;LDAF=0.0425;AVGPOST=0.9917;RSQ=0.9338;ERATE=0.0003;THETA=0.0014;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 187070836 . C CT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4934;ERATE=0.0005;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187070860 . TA T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4853;ERATE=0.0006;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187071027 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0134;AVGPOST=0.9970;RSQ=0.9180;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 187071078 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7597;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187071130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4968;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187071154 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5401;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187071369 . T TAC 9920 PASS INDEL;BAVGPOST=0.970;BRSQ=0.902;LDAF=0.1651;AVGPOST=0.9713;RSQ=0.9247;ERATE=0.0012;THETA=0.0002;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 187071371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.903;LDAF=0.1963;AVGPOST=0.9556;RSQ=0.9053;ERATE=0.0050;THETA=0.0002;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 187071375 . C CAT 1730 PASS INDEL;BAVGPOST=0.948;BRSQ=0.806;LDAF=0.1359;AVGPOST=0.9554;RSQ=0.8665;ERATE=0.0019;THETA=0.0002;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 187071390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0386;AVGPOST=0.9995;RSQ=0.9938;ERATE=0.0003;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 187071409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9208;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187071523 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.2541;AVGPOST=0.9958;RSQ=0.9906;ERATE=0.0005;THETA=0.0005;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 187071625 . CAA C 746 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.7844;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187071626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2115;AVGPOST=0.9936;RSQ=0.9864;ERATE=0.0005;THETA=0.0085;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 187071652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5351;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187072023 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7044;ERATE=0.0003;THETA=0.0138;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187072127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0121;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187072310 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0061;AVGPOST=0.9993;RSQ=0.9535;ERATE=0.0004;THETA=0.0051;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187072348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0161;AVGPOST=0.9989;RSQ=0.9703;ERATE=0.0003;THETA=0.0046;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 187072465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0160;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187072535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9207;ERATE=0.0006;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187072590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.2729;AVGPOST=0.9945;RSQ=0.9902;ERATE=0.0003;THETA=0.0003;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 187072591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8893;ERATE=0.0003;THETA=0.0026;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187072594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.1966;AVGPOST=0.9956;RSQ=0.9899;ERATE=0.0007;THETA=0.0009;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 187072617 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1862;AVGPOST=0.9966;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 187072660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4379;AVGPOST=0.9962;RSQ=0.9938;ERATE=0.0006;THETA=0.0079;AC=956;AN=2184 GT:DS:GL:BD 0.43772894 0
1 187072885 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6909;ERATE=0.0002;THETA=0.0070;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187072921 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2098;AVGPOST=0.9954;RSQ=0.9898;ERATE=0.0005;THETA=0.0032;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 187073016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0094;AVGPOST=0.9987;RSQ=0.9458;ERATE=0.0003;THETA=0.0017;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 187073072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187073091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187073094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0485;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 187073155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0287;AVGPOST=0.9993;RSQ=0.9893;ERATE=0.0003;THETA=0.0051;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 187073158 . ACCAG A 318 PASS INDEL;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7906;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187073203 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6835;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0006;THETA=0.0003;AC=1494;AN=2184 GT:DS:GL:BD 0.68406594 1
1 187073267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6792;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187073273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6272;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187073283 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0094;AVGPOST=0.9982;RSQ=0.9320;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 187073319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187073392 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187073436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9474;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187073571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0056;AVGPOST=0.9987;RSQ=0.9113;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187073712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0105;AVGPOST=0.9990;RSQ=0.9560;ERATE=0.0003;THETA=0.0016;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 187073725 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8987;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187073735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7491;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187073870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7579;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187073950 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6857;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=1498;AN=2184 GT:DS:GL:BD 0.68589741 1
1 187074086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7493;ERATE=0.0004;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187074124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9325;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187074126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2426;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0004;THETA=0.0004;AC=530;AN=2184 GT:DS:GL:BD 0.24267399 0
1 187074167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.960;LDAF=0.0427;AVGPOST=0.9989;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 187074300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187074307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6854;AVGPOST=0.9982;RSQ=0.9964;ERATE=0.0005;THETA=0.0002;AC=1498;AN=2184 GT:DS:GL:BD 0.68589741 1
1 187074330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8819;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187074334 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0183;AVGPOST=0.9995;RSQ=0.9861;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 187074369 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0114;AVGPOST=0.9985;RSQ=0.9441;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187074455 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6384;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187074490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.4362;AVGPOST=0.9977;RSQ=0.9963;ERATE=0.0005;THETA=0.0004;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 187074740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2398;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0002;THETA=0.0002;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 187074768 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6629;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187074775 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187074800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8548;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187074838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2434;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 187074844 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2827;AVGPOST=0.9970;RSQ=0.9945;ERATE=0.0005;THETA=0.0003;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 187074916 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5576;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187074932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187074951 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8128;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187075059 . CAG C 56 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5146;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187075082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8199;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187075098 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5272;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187075105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1558;AVGPOST=0.9978;RSQ=0.9935;ERATE=0.0005;THETA=0.0003;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 187075146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8535;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187075153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.756;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8346;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187075256 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.7926;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187075355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.496;LDAF=0.0038;AVGPOST=0.9951;RSQ=0.4683;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187075426 . AC A 912 PASS INDEL;BAVGPOST=0.746;BRSQ=0.268;LDAF=0.2989;AVGPOST=0.6811;RSQ=0.3462;ERATE=0.0495;THETA=0.0013;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 187075434 . C CA 775 PASS INDEL;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0292;AVGPOST=0.9981;RSQ=0.9686;ERATE=0.0006;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 187075435 . C CA 178 PASS INDEL;BAVGPOST=0.962;BRSQ=0.552;LDAF=0.0895;AVGPOST=0.9007;RSQ=0.5048;ERATE=0.0105;THETA=0.0002;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 187075473 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0039;AVGPOST=0.9983;RSQ=0.8213;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187075506 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.853;LDAF=0.0196;AVGPOST=0.9915;RSQ=0.8281;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 187075592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8937;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187075622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9915;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187075752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187075774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0284;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 187075982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8674;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0002;THETA=0.0003;AC=1895;AN=2184 GT:DS:GL:BD 0.86767399 1
1 187076010 . GT G 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5817;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187076016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187076028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0197;AVGPOST=0.9998;RSQ=0.9958;ERATE=0.0002;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 187076151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9016;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187076344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6826;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0003;THETA=0.0016;AC=1492;AN=2184 GT:DS:GL:BD 0.68315017 1
1 187076423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8818;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187076543 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187076667 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0089;AVGPOST=0.9981;RSQ=0.9274;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 187076672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187076785 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9749;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187076866 . GAAAA G 463 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9263;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187076915 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187077133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5277;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187077134 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.5219;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187077167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6341;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187077229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0163;AVGPOST=0.9991;RSQ=0.9767;ERATE=0.0003;THETA=0.0011;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 187077253 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7404;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187077303 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0051;AVGPOST=0.9971;RSQ=0.8047;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187077473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0102;AVGPOST=0.9966;RSQ=0.8757;ERATE=0.0005;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 187077666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7023;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187077687 . AAATAAT A 833 PASS INDEL;BAVGPOST=0.993;BRSQ=0.724;LDAF=0.0131;AVGPOST=0.9959;RSQ=0.8830;ERATE=0.0004;THETA=0.0047;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 187077845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.874;LDAF=0.1469;AVGPOST=0.9579;RSQ=0.8803;ERATE=0.0043;THETA=0.0006;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 187078002 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187078034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2832;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 187078097 . CTTTA C 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187078109 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187078276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5430;AVGPOST=0.9965;RSQ=0.9942;ERATE=0.0005;THETA=0.0004;AC=1187;AN=2184 GT:DS:GL:BD 0.54349816 1
1 187078293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2140;AVGPOST=0.9965;RSQ=0.9931;ERATE=0.0004;THETA=0.0019;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 187078397 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8449;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187078449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8559;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187078471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187078502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8889;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187078556 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187078571 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0183;AVGPOST=0.9990;RSQ=0.9799;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 187078640 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0212;AVGPOST=0.9994;RSQ=0.9877;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 187078671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2072;AVGPOST=0.9972;RSQ=0.9945;ERATE=0.0003;THETA=0.0002;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 187078757 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.744;LDAF=0.0075;AVGPOST=0.9948;RSQ=0.7601;ERATE=0.0004;THETA=0.0014;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187078841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4900;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187079127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0078;AVGPOST=0.9997;RSQ=0.9806;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187079132 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2655;AVGPOST=0.9948;RSQ=0.9904;ERATE=0.0010;THETA=0.0005;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 187079218 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5638;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187079342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2664;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 187079374 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0042;AVGPOST=0.9986;RSQ=0.8471;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187079401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0333;AVGPOST=0.9993;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 187079402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187079415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187079444 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8109;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187079491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0332;AVGPOST=0.9994;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 187079519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8484;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187079559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6288;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187079566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.8756;ERATE=0.0011;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187079704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5520;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187079922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.4672;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187079961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4746;AVGPOST=0.9940;RSQ=0.9906;ERATE=0.0009;THETA=0.0003;AC=1039;AN=2184 GT:DS:GL:BD 0.47573259 0
1 187080043 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5888;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187080100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.924;LDAF=0.0264;AVGPOST=0.9968;RSQ=0.9452;ERATE=0.0003;THETA=0.0001;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 187080133 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.619;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6440;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187080155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0316;AVGPOST=0.9986;RSQ=0.9822;ERATE=0.0005;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 187080186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8501;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187080329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6918;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187080444 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6610;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187080515 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0005;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187080529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9931;ERATE=0.0002;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 187080531 rs34938681 AT A 16856 PASS INDEL;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2619;AVGPOST=0.9967;RSQ=0.9939;ERATE=0.0006;THETA=0.0003;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 187080603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2157;AVGPOST=0.9950;RSQ=0.9892;ERATE=0.0009;THETA=0.0002;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 187080633 . ACT A 40 PASS INDEL;BAVGPOST=0.992;BRSQ=0.617;LDAF=0.0245;AVGPOST=0.9700;RSQ=0.5039;ERATE=0.0076;THETA=0.0015;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 187080788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6226;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187080962 rs67564421 A AT 629 PASS INDEL;BAVGPOST=0.776;BRSQ=0.380;LDAF=0.2535;AVGPOST=0.7776;RSQ=0.5390;ERATE=0.0167;THETA=0.0002;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 187081095 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1176;AVGPOST=0.9956;RSQ=0.9842;ERATE=0.0004;THETA=0.0003;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 187081170 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0310;AVGPOST=0.9993;RSQ=0.9892;ERATE=0.0003;THETA=0.0001;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 187081199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2609;AVGPOST=0.9981;RSQ=0.9962;ERATE=0.0006;THETA=0.0003;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 187081245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187081249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6637;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187081270 . CGTGGTAATA C 8623 PASS INDEL;BAVGPOST=0.901;BRSQ=0.724;LDAF=0.2051;AVGPOST=0.9324;RSQ=0.8504;ERATE=0.0051;THETA=0.0004;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 187081271 rs72237371 GTGGTAATAGTT G 19113 PASS INDEL;BAVGPOST=0.959;BRSQ=0.906;LDAF=0.2503;AVGPOST=0.9808;RSQ=0.9672;ERATE=0.0009;THETA=0.0001;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 187081326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6425;AVGPOST=0.9961;RSQ=0.9930;ERATE=0.0006;THETA=0.0003;AC=1404;AN=2184 GT:DS:GL:BD 0.64285713 1
1 187081391 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187081433 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2615;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0004;THETA=0.0005;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 187081469 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9994;RSQ=0.9859;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 187081612 . T TTTTTA 13767 PASS INDEL;BAVGPOST=0.933;BRSQ=0.848;LDAF=0.2456;AVGPOST=0.9547;RSQ=0.9139;ERATE=0.0037;THETA=0.0008;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 187081649 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.466;LDAF=0.0098;AVGPOST=0.9921;RSQ=0.6787;ERATE=0.0006;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187081653 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.666;LDAF=0.0908;AVGPOST=0.9230;RSQ=0.6300;ERATE=0.0132;THETA=0.0005;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 187081732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.757;LDAF=0.0105;AVGPOST=0.9895;RSQ=0.5993;ERATE=0.0010;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187081744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.743;LDAF=0.0116;AVGPOST=0.9942;RSQ=0.7970;ERATE=0.0005;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 187082142 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187082239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8677;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187082272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0646;AVGPOST=0.9994;RSQ=0.9961;ERATE=0.0002;THETA=0.0034;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 187082330 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2133;AVGPOST=0.9973;RSQ=0.9943;ERATE=0.0003;THETA=0.0054;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 187082408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5311;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187082409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187082465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0089;AVGPOST=0.9982;RSQ=0.9273;ERATE=0.0003;THETA=0.0021;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 187082502 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0100;AVGPOST=0.9975;RSQ=0.8981;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 187082510 . CT C 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5553;ERATE=0.0004;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187082569 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.812;LDAF=0.0061;AVGPOST=0.9985;RSQ=0.8925;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187082640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9079;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187082719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5198;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187082758 . TA T 164 PASS INDEL;BAVGPOST=0.998;BRSQ=0.565;LDAF=0.0043;AVGPOST=0.9955;RSQ=0.5580;ERATE=0.0008;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187082923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5873;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187082924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.7056;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187083123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187083145 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187083163 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.9017;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187083169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187083252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7685;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187083290 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9456;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187083298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187083354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0730;AVGPOST=0.9973;RSQ=0.9861;ERATE=0.0004;THETA=0.0010;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 187083362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2191;AVGPOST=0.9950;RSQ=0.9896;ERATE=0.0009;THETA=0.0003;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 187083388 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8544;ERATE=0.0004;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187083454 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5291;AVGPOST=0.9910;RSQ=0.9861;ERATE=0.0012;THETA=0.0017;AC=1156;AN=2184 GT:DS:GL:BD 0.52930403 1
1 187083562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187083580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0458;AVGPOST=0.9989;RSQ=0.9922;ERATE=0.0002;THETA=0.0023;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 187083696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6938;ERATE=0.0003;THETA=0.0097;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187083714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187083734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9995;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 187083808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9645;ERATE=0.0002;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187083900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187083980 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0265;AVGPOST=0.9997;RSQ=0.9954;ERATE=0.0002;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187084024 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9464;ERATE=0.0002;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187084063 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7600;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187084183 . C CA 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5558;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187084207 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0072;AVGPOST=0.9981;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187084210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8383;ERATE=0.0009;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187084268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9158;ERATE=0.0002;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187084273 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7895;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187084346 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5985;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187084598 . TGAGGAA T 181 PASS INDEL;BAVGPOST=0.998;BRSQ=0.669;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7091;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187084607 rs71665892 CAGA C 19273 PASS INDEL;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2064;AVGPOST=0.9955;RSQ=0.9891;ERATE=0.0006;THETA=0.0004;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 187084700 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187084723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2549;AVGPOST=0.9979;RSQ=0.9957;ERATE=0.0002;THETA=0.0002;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 187084806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2545;AVGPOST=0.9978;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 187084854 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5402;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187084970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8005;ERATE=0.0009;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187085034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187085111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7423;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187085254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187085353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187085487 . A AG 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4296;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187085534 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9744;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187085551 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7890;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187085601 . TTC T 22304 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2559;AVGPOST=0.9951;RSQ=0.9884;ERATE=0.0012;THETA=0.0003;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 187085614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187085758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187085831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0265;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0003;THETA=0.0007;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187085864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0246;AVGPOST=0.9974;RSQ=0.9638;ERATE=0.0004;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 187085870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0203;AVGPOST=0.9972;RSQ=0.9503;ERATE=0.0002;THETA=0.0001;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 187085970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4874;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187086011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7676;ERATE=0.0002;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187086053 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0177;AVGPOST=0.9994;RSQ=0.9847;ERATE=0.0002;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 187086076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1299;AVGPOST=0.9976;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 187086084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7487;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187086139 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5642;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=1233;AN=2184 GT:DS:GL:BD 0.56456041 1
1 187086353 . GGGGT G 5626 PASS INDEL;BAVGPOST=0.957;BRSQ=0.840;LDAF=0.1411;AVGPOST=0.9822;RSQ=0.9490;ERATE=0.0005;THETA=0.0002;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 187086493 . C CT 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4443;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187086674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5721;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187086693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0267;AVGPOST=0.9995;RSQ=0.9913;ERATE=0.0004;THETA=0.0001;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187086794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187086849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9642;ERATE=0.0003;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187087112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2823;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0003;THETA=0.0001;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 187087170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1539;AVGPOST=0.9981;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 187087201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187087215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9704;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187087218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8172;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187087229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2003;AVGPOST=0.9981;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 187087242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0373;AVGPOST=0.9973;RSQ=0.9720;ERATE=0.0002;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 187087328 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=0.9990;RSQ=0.9893;ERATE=0.0002;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187087348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0098;AVGPOST=0.9984;RSQ=0.9404;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 187087431 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9496;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187087469 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8562;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187087533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187087635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187087774 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187087888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8154;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187087927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6143;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187088085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0271;AVGPOST=0.9997;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 187088092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0451;AVGPOST=0.9988;RSQ=0.9900;ERATE=0.0004;THETA=0.0003;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 187088098 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7880;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187088275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187088396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5667;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=1238;AN=2184 GT:DS:GL:BD 0.56684983 1
1 187088397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6722;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187088477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8442;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187088523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7003;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187088545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0226;AVGPOST=0.9995;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187088611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2548;AVGPOST=0.9975;RSQ=0.9942;ERATE=0.0006;THETA=0.0003;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 187088755 . GC G 173 PASS INDEL;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5322;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187088779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.897;LDAF=0.0142;AVGPOST=0.9962;RSQ=0.8909;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 187088804 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5680;AVGPOST=0.9969;RSQ=0.9947;ERATE=0.0005;THETA=0.0004;AC=1241;AN=2184 GT:DS:GL:BD 0.56822342 1
1 187088954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0065;AVGPOST=0.9987;RSQ=0.9236;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187089061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.0204;AVGPOST=0.9982;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 187089119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187089141 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1538;AVGPOST=0.9983;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 187089236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.722;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187089277 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0222;AVGPOST=0.9990;RSQ=0.9828;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187089293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7012;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187089333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9744;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187089377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0266;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187089477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1282;AVGPOST=0.9991;RSQ=0.9965;ERATE=0.0004;THETA=0.0007;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 187089549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8606;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187089645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5107;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187089676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5372;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187089763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0036;AVGPOST=0.9946;RSQ=0.5296;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187089848 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2813;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=615;AN=2184 GT:DS:GL:BD 0.28159341 0
1 187089927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187089928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9482;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187090052 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0055;AVGPOST=0.9992;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187090077 . A AC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7478;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187090097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.822;LDAF=0.0149;AVGPOST=0.9956;RSQ=0.8882;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 187090415 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187090428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7851;AVGPOST=0.9983;RSQ=0.9953;ERATE=0.0003;THETA=0.0007;AC=1716;AN=2184 GT:DS:GL:BD 0.78571427 1
1 187090584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.981;LDAF=0.5661;AVGPOST=0.9941;RSQ=0.9905;ERATE=0.0010;THETA=0.0003;AC=1234;AN=2184 GT:DS:GL:BD 0.56501830 1
1 187090663 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4962;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187090673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2812;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 187090902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0174;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0002;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 187090918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0051;AVGPOST=0.9993;RSQ=0.9346;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187091158 . A AG 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6568;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187091258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4990;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187091372 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2549;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 187091418 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6967;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187091472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7571;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187091562 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.499;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7221;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187091634 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187091709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0458;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 187091744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0214;AVGPOST=0.9994;RSQ=0.9907;ERATE=0.0002;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187092010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5149;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187092029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8961;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187092156 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0458;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 187092219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187092274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0268;AVGPOST=0.9992;RSQ=0.9870;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187092319 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.3044;ERATE=0.0002;THETA=0.0030;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 187092320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.2212;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 187092350 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2811;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0004;THETA=0.0009;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 187092419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2813;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 187092482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2795;AVGPOST=0.9974;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 187092489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187092548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5792;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187092598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187092625 . TA T 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4324;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187092627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8494;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187092681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.911;LDAF=0.0061;AVGPOST=0.9990;RSQ=0.9292;ERATE=0.0002;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187092769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.798;LDAF=0.0090;AVGPOST=0.9977;RSQ=0.8917;ERATE=0.0005;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 187092848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6956;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187092926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5462;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187092981 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187093074 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9282;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187093075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9521;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187093132 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9643;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187093170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0031;AVGPOST=0.9981;RSQ=0.7656;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187093298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.1766;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 187093361 . C CT 1130 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1047;AVGPOST=0.9951;RSQ=0.9799;ERATE=0.0008;THETA=0.0004;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 187093363 rs72503160 T TA 10524 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1060;AVGPOST=0.9987;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 187093377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1915;AVGPOST=0.9984;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 187093415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6497;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187093445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2556;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0004;THETA=0.0002;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 187093575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.2041;AVGPOST=0.9935;RSQ=0.9844;ERATE=0.0015;THETA=0.0005;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 187093600 . A AAT 161 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7677;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187093666 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7858;AVGPOST=0.9946;RSQ=0.9860;ERATE=0.0012;THETA=0.0004;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 187093807 . ATTTG A 362 PASS INDEL;BAVGPOST=0.998;BRSQ=0.750;LDAF=0.0082;AVGPOST=0.9948;RSQ=0.7594;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187093842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7896;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187094165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2349;AVGPOST=0.9969;RSQ=0.9936;ERATE=0.0005;THETA=0.0004;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 187094214 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5110;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187094242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0048;AVGPOST=0.9978;RSQ=0.8124;ERATE=0.0005;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187094315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187094328 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2050;AVGPOST=0.9982;RSQ=0.9952;ERATE=0.0005;THETA=0.0003;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 187094337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9430;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187094447 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5461;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187094497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8270;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187094504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6942;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187094527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0225;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0003;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187094638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.964;LDAF=0.0497;AVGPOST=0.9969;RSQ=0.9769;ERATE=0.0003;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 187094667 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187094849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187094860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9125;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187094935 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187094945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9136;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187094962 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1561;AVGPOST=0.9986;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 187095112 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8496;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187095237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187095340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187095348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187095416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5888;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187095417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0076;AVGPOST=0.9984;RSQ=0.9179;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187095420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187095457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7937;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187095484 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=0.9991;RSQ=0.9874;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187095567 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6313;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187095610 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2542;AVGPOST=0.9982;RSQ=0.9958;ERATE=0.0005;THETA=0.0005;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 187095614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0127;AVGPOST=0.9987;RSQ=0.9579;ERATE=0.0002;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 187095638 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187095640 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187095712 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.795;LDAF=0.0088;AVGPOST=0.9951;RSQ=0.7852;ERATE=0.0005;THETA=0.0001;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187095751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.5577;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187095791 . T TA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4209;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187095884 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8626;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187095934 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.5848;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 187095959 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2523;AVGPOST=0.9983;RSQ=0.9962;ERATE=0.0004;THETA=0.0005;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 187095967 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0267;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0002;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187095980 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.979;LDAF=0.1065;AVGPOST=0.9965;RSQ=0.9877;ERATE=0.0004;THETA=0.0001;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 187095986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8958;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187096009 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5966;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187096016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0214;AVGPOST=0.9983;RSQ=0.9701;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 187096032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187096096 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.5818;AVGPOST=0.9899;RSQ=0.9841;ERATE=0.0019;THETA=0.0004;AC=1270;AN=2184 GT:DS:GL:BD 0.58150184 1
1 187096147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8465;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187096160 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6801;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187096178 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0024;AVGPOST=0.9960;RSQ=0.3769;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187096203 rs72292586 GA G 15192 PASS INDEL;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2542;AVGPOST=0.9948;RSQ=0.9878;ERATE=0.0013;THETA=0.0003;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 187096216 . G GA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5592;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187096481 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8090;AVGPOST=0.9957;RSQ=0.9881;ERATE=0.0008;THETA=0.0002;AC=1770;AN=2184 GT:DS:GL:BD 0.81043959 1
1 187096610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0268;AVGPOST=0.9994;RSQ=0.9888;ERATE=0.0004;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187096620 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8988;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187096626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6824;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187096736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7899;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187096773 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4046;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187096859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0049;AVGPOST=0.9990;RSQ=0.9056;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187096894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0470;AVGPOST=0.9981;RSQ=0.9872;ERATE=0.0004;THETA=0.0002;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 187096917 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6521;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187097046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187097145 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1279;AVGPOST=0.9981;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 187097197 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187097218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187097246 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.825;LDAF=0.0046;AVGPOST=0.9980;RSQ=0.8506;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187097294 . A AT 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187097308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8816;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187097309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187097352 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187097379 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6613;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187097395 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7285;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187097401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7857;AVGPOST=0.9979;RSQ=0.9943;ERATE=0.0005;THETA=0.0006;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 187097520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2805;AVGPOST=0.9979;RSQ=0.9954;ERATE=0.0006;THETA=0.0003;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 187097551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2847;AVGPOST=0.9943;RSQ=0.9890;ERATE=0.0007;THETA=0.0005;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 187097599 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.7021;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187097699 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8360;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187097801 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7111;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187097931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.9035;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187098152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0267;AVGPOST=0.9995;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187098216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.8100;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187098422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2089;AVGPOST=0.9977;RSQ=0.9947;ERATE=0.0006;THETA=0.0003;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 187098473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6487;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187098514 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2822;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 187098591 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0226;AVGPOST=0.9997;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187098627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.847;LDAF=0.0075;AVGPOST=0.9965;RSQ=0.8312;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187098693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7202;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187098749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5624;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187098812 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5471;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187099022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187099025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0214;AVGPOST=0.9994;RSQ=0.9906;ERATE=0.0002;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187099047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7667;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187099080 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8129;AVGPOST=0.9974;RSQ=0.9928;ERATE=0.0003;THETA=0.0002;AC=1776;AN=2184 GT:DS:GL:BD 0.81318682 1
1 187099210 . T TA 75 PASS INDEL;BAVGPOST=0.998;BRSQ=0.652;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7149;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187099385 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8076;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187099446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5379;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187099532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9424;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187099601 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1321;AVGPOST=0.9956;RSQ=0.9864;ERATE=0.0008;THETA=0.0002;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 187099843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187099854 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8739;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187099880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7717;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187099920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187100011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2030;AVGPOST=0.9985;RSQ=0.9959;ERATE=0.0006;THETA=0.0005;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 187100046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0266;AVGPOST=0.9997;RSQ=0.9953;ERATE=0.0002;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187100136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7789;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187100171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2540;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 187100198 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2814;AVGPOST=0.9983;RSQ=0.9962;ERATE=0.0010;THETA=0.0002;AC=615;AN=2184 GT:DS:GL:BD 0.28159341 0
1 187100212 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187100278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187100442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2541;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0005;THETA=0.0006;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 187100490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8080;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187100523 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6368;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187100560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187100872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2553;AVGPOST=0.9977;RSQ=0.9951;ERATE=0.0005;THETA=0.0013;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 187101005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8514;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187101144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0273;AVGPOST=0.9985;RSQ=0.9767;ERATE=0.0003;THETA=0.0023;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187101184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187101235 . A AG 6776 PASS INDEL;BAVGPOST=0.930;BRSQ=0.883;LDAF=0.4812;AVGPOST=0.9202;RSQ=0.8867;ERATE=0.0060;THETA=0.0002;AC=1069;AN=2184 GT:DS:GL:BD 0.48946887 0
1 187101236 rs74465749 G GA 62129 PASS INDEL;BAVGPOST=0.971;BRSQ=0.948;LDAF=0.5555;AVGPOST=0.9777;RSQ=0.9682;ERATE=0.0007;THETA=0.0003;AC=1220;AN=2184 GT:DS:GL:BD 0.55860806 1
1 187101237 . A AG 6218 PASS INDEL;BAVGPOST=0.933;BRSQ=0.886;LDAF=0.4967;AVGPOST=0.9440;RSQ=0.9218;ERATE=0.0006;THETA=0.0008;AC=1097;AN=2184 GT:DS:GL:BD 0.50228935 1
1 187101239 . A AT 11418 PASS INDEL;BAVGPOST=0.919;BRSQ=0.859;LDAF=0.4688;AVGPOST=0.8751;RSQ=0.8161;ERATE=0.0274;THETA=0.0003;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 187101250 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.968;LDAF=0.1288;AVGPOST=0.9942;RSQ=0.9797;ERATE=0.0004;THETA=0.0004;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 187101251 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8458;ERATE=0.0002;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187101284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7068;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187101470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9516;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187101482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0266;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187101565 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187101606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9572;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 187101625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187101673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.829;LDAF=0.0063;AVGPOST=0.9990;RSQ=0.9431;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187101839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2554;AVGPOST=0.9969;RSQ=0.9930;ERATE=0.0008;THETA=0.0002;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 187101863 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2804;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 187101930 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.957;LDAF=0.5506;AVGPOST=0.9559;RSQ=0.9297;ERATE=0.0130;THETA=0.0003;AC=1216;AN=2184 GT:DS:GL:BD 0.55677658 1
1 187102113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2545;AVGPOST=0.9971;RSQ=0.9932;ERATE=0.0008;THETA=0.0004;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 187102177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0060;AVGPOST=0.9982;RSQ=0.8672;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187102233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0269;AVGPOST=0.9992;RSQ=0.9856;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187102245 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6597;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187102267 . GA G 95 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0052;AVGPOST=0.9967;RSQ=0.7589;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187102299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0049;AVGPOST=0.9989;RSQ=0.8936;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187102300 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4537;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187102369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7949;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187102428 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2534;AVGPOST=0.9973;RSQ=0.9941;ERATE=0.0005;THETA=0.0005;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 187102480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187102539 . GAGT G 769 PASS INDEL;BAVGPOST=0.997;BRSQ=0.775;LDAF=0.0103;AVGPOST=0.9950;RSQ=0.8171;ERATE=0.0005;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 187102650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6884;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187102690 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5794;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187102773 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0266;AVGPOST=0.9996;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187102926 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9860;ERATE=0.0004;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 187103011 . CACA C 14810 PASS INDEL;BAVGPOST=0.988;BRSQ=0.958;LDAF=0.1557;AVGPOST=0.9841;RSQ=0.9571;ERATE=0.0017;THETA=0.0007;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 187103019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5880;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187103065 . CG C 2851 PASS INDEL;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0230;AVGPOST=0.9989;RSQ=0.9823;ERATE=0.0003;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 187103084 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9590;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187103177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8830;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187103284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187103377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0266;AVGPOST=0.9990;RSQ=0.9832;ERATE=0.0003;THETA=0.0001;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187103422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7607;ERATE=0.0003;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187103538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0208;AVGPOST=0.9973;RSQ=0.9484;ERATE=0.0004;THETA=0.0010;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 187103560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.4786;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187103582 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8882;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187103612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0045;AVGPOST=0.9963;RSQ=0.6983;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187103799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0214;AVGPOST=0.9993;RSQ=0.9876;ERATE=0.0002;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187103886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5567;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187103892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6603;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187103945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3757;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187104121 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1771;AVGPOST=0.9963;RSQ=0.9902;ERATE=0.0004;THETA=0.0003;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 187104139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2559;AVGPOST=0.9979;RSQ=0.9950;ERATE=0.0005;THETA=0.0004;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 187104181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0225;AVGPOST=0.9997;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187104186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0233;AVGPOST=0.9995;RSQ=0.9907;ERATE=0.0002;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 187104351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9047;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187104415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8136;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187104657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0469;AVGPOST=0.9993;RSQ=0.9937;ERATE=0.0004;THETA=0.0007;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 187104696 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2809;AVGPOST=0.9982;RSQ=0.9960;ERATE=0.0006;THETA=0.0005;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 187104699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6881;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187104739 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.5426;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187104864 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187104877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7800;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187104936 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187105002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0277;AVGPOST=0.9990;RSQ=0.9872;ERATE=0.0002;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 187105090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.760;LDAF=0.0087;AVGPOST=0.9971;RSQ=0.8584;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 187105157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0086;AVGPOST=0.9991;RSQ=0.9558;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 187105169 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187105510 rs35685965 A AC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187105588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9597;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187105625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.7874;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187105676 . CTT C 2160 PASS INDEL;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0200;AVGPOST=0.9990;RSQ=0.9785;ERATE=0.0004;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 187105692 . ATAACT A 240 PASS INDEL;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3149;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187105703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4081;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187105810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9987;RSQ=0.4064;ERATE=0.0002;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187105846 . G GA 49 PASS INDEL;BAVGPOST=0.998;BRSQ=0.676;LDAF=0.0044;AVGPOST=0.9953;RSQ=0.5972;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187105898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8529;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187105956 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9963;RSQ=0.6476;ERATE=0.0005;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187105970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.815;LDAF=0.0085;AVGPOST=0.9988;RSQ=0.9362;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 187106064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6624;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187106306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0206;AVGPOST=0.9990;RSQ=0.9791;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 187106332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7505;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187106361 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4962;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187106405 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2535;AVGPOST=0.9979;RSQ=0.9954;ERATE=0.0005;THETA=0.0022;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 187106515 . TCAC T 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5595;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187106542 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7605;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187106684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8717;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187106879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0059;AVGPOST=0.9927;RSQ=0.5324;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187106882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8380;AVGPOST=0.9872;RSQ=0.9684;ERATE=0.0011;THETA=0.0005;AC=1834;AN=2184 GT:DS:GL:BD 0.83974361 1
1 187106924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4345;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187107051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8667;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187107109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9466;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187107126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187107246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0206;AVGPOST=0.9990;RSQ=0.9798;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 187107319 . CT C 334 PASS INDEL;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0071;AVGPOST=0.9935;RSQ=0.6609;ERATE=0.0007;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187107343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7891;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187107399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0281;AVGPOST=0.9991;RSQ=0.9851;ERATE=0.0003;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 187107400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.919;LDAF=0.7729;AVGPOST=0.9266;RSQ=0.8494;ERATE=0.0258;THETA=0.0008;AC=1728;AN=2184 GT:DS:GL:BD 0.79120880 1
1 187107485 . AT A 265 PASS INDEL;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8182;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187107638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.785;LDAF=0.0057;AVGPOST=0.9988;RSQ=0.9133;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187107639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.638;LDAF=0.0121;AVGPOST=0.9843;RSQ=0.5061;ERATE=0.0033;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187107760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2537;AVGPOST=0.9987;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 187107788 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187107955 . CTA C 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187107962 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7925;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187108085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187108217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0036;AVGPOST=0.9978;RSQ=0.7475;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187108257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0269;AVGPOST=0.9989;RSQ=0.9824;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187108335 . AT A 3070 PASS INDEL;BAVGPOST=0.970;BRSQ=0.846;LDAF=0.1171;AVGPOST=0.9882;RSQ=0.9563;ERATE=0.0005;THETA=0.0001;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 187108339 . AG A 2966 PASS INDEL;BAVGPOST=0.970;BRSQ=0.846;LDAF=0.1156;AVGPOST=0.9869;RSQ=0.9524;ERATE=0.0005;THETA=0.0005;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 187108460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.972;LDAF=0.1987;AVGPOST=0.9946;RSQ=0.9864;ERATE=0.0004;THETA=0.0003;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 187108511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0286;AVGPOST=0.9971;RSQ=0.9636;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 187108547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.958;LDAF=0.4236;AVGPOST=0.9393;RSQ=0.9066;ERATE=0.0131;THETA=0.0004;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 187108548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7006;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187108629 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.960;LDAF=0.1985;AVGPOST=0.9898;RSQ=0.9737;ERATE=0.0006;THETA=0.0003;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 187108702 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0079;AVGPOST=0.9931;RSQ=0.6778;ERATE=0.0006;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187108845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0215;AVGPOST=0.9990;RSQ=0.9826;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187108897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8071;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187108927 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0191;AVGPOST=0.9982;RSQ=0.9629;ERATE=0.0005;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 187108989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187108996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187109135 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6249;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187109149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6453;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187109201 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187109416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0002;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187109615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8619;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187109772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5692;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187109982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8166;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187110026 . C CA 1159 PASS INDEL;BAVGPOST=0.995;BRSQ=0.881;LDAF=0.0229;AVGPOST=0.9957;RSQ=0.9289;ERATE=0.0004;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 187110033 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7746;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187110048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.911;LDAF=0.0258;AVGPOST=0.9927;RSQ=0.8954;ERATE=0.0007;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 187110080 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0180;AVGPOST=0.9988;RSQ=0.9699;ERATE=0.0004;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 187110209 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4082;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187110215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.680;LDAF=0.9412;AVGPOST=0.9400;RSQ=0.5766;ERATE=0.0146;THETA=0.0004;AC=2094;AN=2184 GT:DS:GL:BD 0.95879120 1
1 187110358 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6631;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187110420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8587;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187110468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.864;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9528;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187110475 rs59640139 A AC 12416 PASS INDEL;BAVGPOST=0.926;BRSQ=0.819;LDAF=0.2602;AVGPOST=0.9674;RSQ=0.9338;ERATE=0.0038;THETA=0.0003;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 187111344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187111396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0221;AVGPOST=0.9969;RSQ=0.9552;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 187111415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3696;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187111419 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0060;AVGPOST=0.9979;RSQ=0.8754;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187111429 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0086;AVGPOST=0.9962;RSQ=0.8306;ERATE=0.0007;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187111432 . TG T 82 PASS INDEL;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0068;AVGPOST=0.9922;RSQ=0.5377;ERATE=0.0008;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187111460 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.978;LDAF=0.2480;AVGPOST=0.9933;RSQ=0.9859;ERATE=0.0007;THETA=0.0003;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 187111494 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8409;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187111519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1999;AVGPOST=0.9956;RSQ=0.9885;ERATE=0.0004;THETA=0.0006;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 187111641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187111757 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187112125 . T TTG 138 PASS INDEL;BAVGPOST=0.821;BRSQ=0.132;LDAF=0.1383;AVGPOST=0.8633;RSQ=0.5550;ERATE=0.0058;THETA=0.0006;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 187112133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.589;LDAF=0.0709;AVGPOST=0.9152;RSQ=0.5357;ERATE=0.0040;THETA=0.0008;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 187112236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0168;AVGPOST=0.9992;RSQ=0.9772;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 187112490 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5489;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187112497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4932;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187112546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0219;AVGPOST=0.9981;RSQ=0.9655;ERATE=0.0005;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 187112612 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3698;ERATE=0.0004;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187112637 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.712;LDAF=0.0036;AVGPOST=0.9974;RSQ=0.7227;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187112795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0212;AVGPOST=0.9987;RSQ=0.9786;ERATE=0.0003;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 187112825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0032;AVGPOST=0.9958;RSQ=0.4562;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187112870 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6813;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187112890 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8537;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187112943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6116;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187112963 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187113050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0121;AVGPOST=0.9983;RSQ=0.9432;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 187113084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6797;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187113119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7573;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187113136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7502;ERATE=0.0002;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187113217 . CT C 37 PASS INDEL;BAVGPOST=0.999;BRSQ=0.499;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5302;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187113221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5992;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187113306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0035;AVGPOST=0.9967;RSQ=0.6370;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187113377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.1546;AVGPOST=0.9960;RSQ=0.9870;ERATE=0.0005;THETA=0.0003;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 187113385 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6181;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187113424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0072;AVGPOST=0.9988;RSQ=0.9211;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187113479 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9063;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187113559 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9071;ERATE=0.0002;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187113562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8203;AVGPOST=0.9969;RSQ=0.9917;ERATE=0.0005;THETA=0.0003;AC=1792;AN=2184 GT:DS:GL:BD 0.82051283 1
1 187113670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8991;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187113686 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9989;RSQ=0.9821;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 187113819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187113917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8704;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187113943 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0129;AVGPOST=0.9983;RSQ=0.9463;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 187114159 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8529;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187114217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2375;AVGPOST=0.9952;RSQ=0.9900;ERATE=0.0003;THETA=0.0006;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 187114368 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187114370 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187114377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1134;AVGPOST=0.9982;RSQ=0.9936;ERATE=0.0004;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 187114379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5142;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187114395 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187114439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187114542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187114566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5826;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187114595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0085;AVGPOST=0.9979;RSQ=0.9033;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187114645 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.5446;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187114753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3349;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 187114788 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9543;ERATE=0.0002;THETA=0.0024;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187114848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8632;ERATE=0.0009;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187114881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0080;AVGPOST=0.9972;RSQ=0.8569;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187114882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8138;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187114892 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6399;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187114910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1333;AVGPOST=0.9984;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 187114924 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8156;ERATE=0.0002;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187114968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0589;AVGPOST=0.9987;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 187115099 . T TG 1278 PASS INDEL;BAVGPOST=0.983;BRSQ=0.870;LDAF=0.0563;AVGPOST=0.9967;RSQ=0.9761;ERATE=0.0004;THETA=0.0004;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 187115138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5001;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187115166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187115229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0111;AVGPOST=0.9992;RSQ=0.9703;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187115269 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0215;AVGPOST=0.9989;RSQ=0.9808;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 187115290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6328;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187115319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187115389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7817;ERATE=0.0003;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187115655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.2433;AVGPOST=0.9956;RSQ=0.9908;ERATE=0.0004;THETA=0.0002;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 187115756 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187115781 . TC T 90 PASS INDEL;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0070;AVGPOST=0.9977;RSQ=0.8845;ERATE=0.0003;THETA=0.0018;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187115783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.509;LDAF=0.0055;AVGPOST=0.9968;RSQ=0.7833;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187115841 . TTCCC T 2288 PASS INDEL;BAVGPOST=0.893;BRSQ=0.527;LDAF=0.1643;AVGPOST=0.8395;RSQ=0.5509;ERATE=0.0125;THETA=0.0003;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 187115853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.402;LDAF=0.1248;AVGPOST=0.8598;RSQ=0.4925;ERATE=0.0154;THETA=0.0008;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 187115857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.801;BRSQ=0.286;LDAF=0.2356;AVGPOST=0.7384;RSQ=0.3703;ERATE=0.0415;THETA=0.0002;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 187115873 . C CTCGT 132 PASS INDEL;BAVGPOST=0.969;BRSQ=0.169;LDAF=0.1072;AVGPOST=0.8824;RSQ=0.5557;ERATE=0.0049;THETA=0.0006;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 187115880 . CT C 167 PASS INDEL;BAVGPOST=0.856;BRSQ=0.215;LDAF=0.1679;AVGPOST=0.8139;RSQ=0.4786;ERATE=0.0118;THETA=0.0003;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 187115881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.714;BRSQ=0.214;LDAF=0.3193;AVGPOST=0.6681;RSQ=0.3133;ERATE=0.0602;THETA=0.0007;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 187115885 . C CTCGT 27 PASS INDEL;BAVGPOST=0.953;BRSQ=0.108;LDAF=0.1064;AVGPOST=0.8511;RSQ=0.4047;ERATE=0.0083;THETA=0.0009;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 187115893 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.874;BRSQ=0.277;LDAF=0.1994;AVGPOST=0.7477;RSQ=0.3393;ERATE=0.0305;THETA=0.0006;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 187115897 . C CTCGT 587 PASS INDEL;BAVGPOST=0.896;BRSQ=0.204;LDAF=0.1691;AVGPOST=0.7721;RSQ=0.3468;ERATE=0.0189;THETA=0.0004;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 187116005 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.966;LDAF=0.3130;AVGPOST=0.9915;RSQ=0.9852;ERATE=0.0009;THETA=0.0003;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 187116019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1130;AVGPOST=0.9932;RSQ=0.9760;ERATE=0.0009;THETA=0.0002;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 187116141 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6955;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187116146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5822;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187116194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3149;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 187116256 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8450;AVGPOST=0.9944;RSQ=0.9854;ERATE=0.0005;THETA=0.0013;AC=1848;AN=2184 GT:DS:GL:BD 0.84615386 1
1 187116584 . A AGC 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4377;ERATE=0.0005;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187116883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.825;LDAF=0.0214;AVGPOST=0.9943;RSQ=0.9090;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 187116912 . AT A 27 PASS INDEL;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3734;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187117046 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6047;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187117128 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0213;AVGPOST=0.9994;RSQ=0.9896;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187117138 rs78179689 GTTTTGA G 1604 PASS INDEL;BAVGPOST=0.996;BRSQ=0.779;LDAF=0.0095;AVGPOST=0.9961;RSQ=0.8214;ERATE=0.0008;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187117165 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6470;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187117200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187117320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187117343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0265;AVGPOST=0.9992;RSQ=0.9869;ERATE=0.0004;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187117422 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0208;AVGPOST=0.9966;RSQ=0.9322;ERATE=0.0002;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 187117449 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5916;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187117598 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0198;AVGPOST=0.9994;RSQ=0.9868;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 187117693 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2459;AVGPOST=0.9977;RSQ=0.9951;ERATE=0.0004;THETA=0.0002;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 187117787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7336;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187117975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187117977 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6866;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187118131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0591;AVGPOST=0.9986;RSQ=0.9907;ERATE=0.0003;THETA=0.0002;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 187118136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2890;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 187118230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6011;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187118484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2907;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0004;THETA=0.0009;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 187118506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9490;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187118550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.822;LDAF=0.0058;AVGPOST=0.9965;RSQ=0.7796;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187118591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7644;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187118794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0218;AVGPOST=0.9984;RSQ=0.9737;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187118810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187118872 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0324;AVGPOST=0.9990;RSQ=0.9866;ERATE=0.0003;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 187118917 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187118964 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1182;AVGPOST=0.9977;RSQ=0.9902;ERATE=0.0003;THETA=0.0003;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 187118966 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.841;LDAF=0.0297;AVGPOST=0.9904;RSQ=0.8768;ERATE=0.0005;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187118968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187119026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.978;LDAF=0.1873;AVGPOST=0.9974;RSQ=0.9940;ERATE=0.0005;THETA=0.0006;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 187119067 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187119150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6784;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187119168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8200;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187119202 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187119230 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187119285 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0260;AVGPOST=0.9983;RSQ=0.9785;ERATE=0.0002;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 187119395 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.850;LDAF=0.0340;AVGPOST=0.9944;RSQ=0.9329;ERATE=0.0003;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 187119426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187119466 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.847;LDAF=0.0122;AVGPOST=0.9944;RSQ=0.8359;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187119488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9328;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187119543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5201;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187119591 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8671;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187119851 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187119896 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0037;AVGPOST=0.9955;RSQ=0.4997;ERATE=0.0011;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187120113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187120215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.771;LDAF=0.0067;AVGPOST=0.9992;RSQ=0.9452;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187120241 . CTTATTA C 132 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4327;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187120318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0082;AVGPOST=0.9991;RSQ=0.9475;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187120386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2888;AVGPOST=0.9968;RSQ=0.9936;ERATE=0.0006;THETA=0.0004;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 187120387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5444;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187120448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.8021;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187120481 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5636;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187120483 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9112;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187120524 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187120628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187120766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9262;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187120861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187120931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8059;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187120937 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9077;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187120941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6550;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187121004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5938;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187121010 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0211;AVGPOST=0.9981;RSQ=0.9673;ERATE=0.0003;THETA=0.0015;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 187121077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4884;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187121103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6028;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187121167 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.830;LDAF=0.0129;AVGPOST=0.9977;RSQ=0.9270;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 187121168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0265;AVGPOST=0.9984;RSQ=0.9715;ERATE=0.0003;THETA=0.0001;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187121188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0455;AVGPOST=0.9975;RSQ=0.9786;ERATE=0.0003;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 187121195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5468;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187121248 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8383;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187121253 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.919;LDAF=0.1004;AVGPOST=0.9977;RSQ=0.9893;ERATE=0.0005;THETA=0.0004;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 187121275 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0286;AVGPOST=0.9973;RSQ=0.9638;ERATE=0.0005;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 187121280 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9439;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187121349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4759;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187121415 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0064;AVGPOST=0.9973;RSQ=0.8532;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187121482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187121499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1888;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 187121626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9602;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187121792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6550;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187121798 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187121834 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187121899 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3152;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 187121939 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0203;AVGPOST=0.9985;RSQ=0.9743;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 187122143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.868;LDAF=0.0117;AVGPOST=0.9966;RSQ=0.8918;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187122225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2891;AVGPOST=0.9980;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 187122411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1804;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 187122432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5267;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187122608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8032;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187122651 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8013;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187122660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187122685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187122694 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6425;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187122947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.7178;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187122968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0588;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0002;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 187122976 . CTT C 166 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7946;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187123075 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7217;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187123084 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0131;AVGPOST=0.9991;RSQ=0.9702;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 187123185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1320;AVGPOST=0.9980;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 187123233 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187123285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5590;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187123382 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8456;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187123405 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0147;AVGPOST=0.9991;RSQ=0.9770;ERATE=0.0002;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 187123491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8297;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187123691 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6970;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0005;THETA=0.0004;AC=1525;AN=2184 GT:DS:GL:BD 0.69826007 1
1 187123704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5388;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187123865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187123948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1089;AVGPOST=0.9986;RSQ=0.9938;ERATE=0.0005;THETA=0.0002;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 187123972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2905;AVGPOST=0.9986;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 187124204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187124414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6101;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187124425 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187124719 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187124745 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.6029;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187124803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8756;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187124804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9117;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187124858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7666;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187124997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9289;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187125143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1830;AVGPOST=0.9986;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 187125167 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5991;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187125249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187125253 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5794;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187125280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187125355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0053;AVGPOST=0.9972;RSQ=0.8000;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187125453 . AT A 43 PASS INDEL;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5387;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187125522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0591;AVGPOST=0.9988;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 187125562 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4243;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187125661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6447;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187125735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6701;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187125786 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0045;AVGPOST=0.9998;RSQ=0.9772;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187125807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7856;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187125882 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.438;LDAF=0.0078;AVGPOST=0.9928;RSQ=0.6490;ERATE=0.0010;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187125897 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6296;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187125900 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0079;AVGPOST=0.9991;RSQ=0.9501;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187126130 . A AT 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6489;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187126148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187126227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.808;LDAF=0.0059;AVGPOST=0.9986;RSQ=0.9053;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187126299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187126335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9648;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187126448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6589;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187126458 . GC G 595 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9477;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187126487 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9357;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187126514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0040;AVGPOST=0.9981;RSQ=0.8214;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187126563 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4962;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187126565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0082;AVGPOST=0.9988;RSQ=0.9346;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 187126581 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187126621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5756;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187126626 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187126640 . ATG A 45 PASS INDEL;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5251;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187126680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187126725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9899;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187126793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7703;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187126841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187126867 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3150;AVGPOST=0.9972;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 187126916 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5296;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187126996 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187127038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7772;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187127075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2131;AVGPOST=0.9978;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 187127373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2442;AVGPOST=0.9958;RSQ=0.9905;ERATE=0.0007;THETA=0.0002;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 187127385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5817;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187127417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0039;AVGPOST=0.9976;RSQ=0.7741;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187127543 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8787;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187127671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0039;AVGPOST=0.9977;RSQ=0.7463;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187127716 . CAG C 636 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0103;AVGPOST=0.9966;RSQ=0.8750;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 187127730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0216;AVGPOST=0.9989;RSQ=0.9807;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187127762 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6209;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187127800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4768;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187127807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0080;AVGPOST=0.9982;RSQ=0.9134;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187127907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0193;AVGPOST=0.9983;RSQ=0.9595;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 187128069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187128282 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6983;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187128315 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187128342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2882;AVGPOST=0.9979;RSQ=0.9952;ERATE=0.0006;THETA=0.0005;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 187128359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0268;AVGPOST=0.9992;RSQ=0.9890;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187128420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9064;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187128480 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187128483 . G GT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6646;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187128484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187128522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187128524 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187128531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0267;AVGPOST=0.9995;RSQ=0.9918;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187128557 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2412;AVGPOST=0.9973;RSQ=0.9944;ERATE=0.0004;THETA=0.0002;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 187128626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1807;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 187128766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0086;AVGPOST=0.9929;RSQ=0.6997;ERATE=0.0007;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 187128767 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187128787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187128801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5348;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187128827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187128837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9997;RSQ=0.9616;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187128911 . G GT 4279 PASS INDEL;BAVGPOST=0.988;BRSQ=0.782;LDAF=0.0249;AVGPOST=0.9939;RSQ=0.8981;ERATE=0.0006;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 187129011 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0227;AVGPOST=0.9994;RSQ=0.9892;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187129072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.7758;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187129151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1329;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0004;THETA=0.0002;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 187129263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0466;AVGPOST=0.9993;RSQ=0.9940;ERATE=0.0002;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 187129431 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4911;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187129548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8348;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187129569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9748;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187129770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5780;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187129981 . A ATG 508 PASS INDEL;BAVGPOST=0.997;BRSQ=0.691;LDAF=0.0058;AVGPOST=0.9943;RSQ=0.6171;ERATE=0.0006;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187129990 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9720;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187129991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0265;AVGPOST=0.9993;RSQ=0.9887;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187129992 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187130158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8689;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187130247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4671;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187130383 rs72503161 ACT A 13789 PASS INDEL;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1093;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 187130437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8536;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187130494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0080;AVGPOST=0.9970;RSQ=0.8534;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187130504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187130516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.952;LDAF=0.1550;AVGPOST=0.9956;RSQ=0.9877;ERATE=0.0003;THETA=0.0004;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 187130639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.8866;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187130712 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0111;AVGPOST=0.9984;RSQ=0.9446;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187130765 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7273;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187130869 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5179;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187130913 . GAGGAAGCTAA G 537 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187130917 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187130919 . G GTC 104 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8072;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187130954 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9647;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187130959 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9640;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187131099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9711;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187131144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6875;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187131209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5713;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187131218 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2505;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 187131237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9676;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187131326 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187131403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5342;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187131404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.980;LDAF=0.2884;AVGPOST=0.9951;RSQ=0.9915;ERATE=0.0008;THETA=0.0007;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 187131422 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187131516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1805;AVGPOST=0.9985;RSQ=0.9967;ERATE=0.0005;THETA=0.0004;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 187131519 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.4456;AVGPOST=0.9943;RSQ=0.9903;ERATE=0.0016;THETA=0.0004;AC=971;AN=2184 GT:DS:GL:BD 0.44459707 0
1 187131660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187131702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5177;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187131718 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187131771 . GTA G 16212 PASS INDEL;BAVGPOST=0.977;BRSQ=0.960;LDAF=0.4106;AVGPOST=0.9717;RSQ=0.9613;ERATE=0.0040;THETA=0.0003;AC=896;AN=2184 GT:DS:GL:BD 0.41025642 0
1 187131829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.899;LDAF=0.1464;AVGPOST=0.9410;RSQ=0.8222;ERATE=0.0180;THETA=0.0003;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 187131994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8743;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187132026 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0266;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0002;THETA=0.0018;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187132115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187132133 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187132145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2880;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 187132311 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0468;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 187132323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6366;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187132424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187132799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0474;AVGPOST=0.9990;RSQ=0.9914;ERATE=0.0005;THETA=0.0002;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 187132883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.852;LDAF=0.1157;AVGPOST=0.9852;RSQ=0.9420;ERATE=0.0006;THETA=0.0002;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 187133180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5095;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187133329 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9432;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187133337 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0030;AVGPOST=0.9972;RSQ=0.6402;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187133345 . TAC T 89 PASS INDEL;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4024;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187133528 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6963;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187133540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8485;AVGPOST=0.9994;RSQ=0.9982;ERATE=0.0002;THETA=0.0003;AC=1855;AN=2184 GT:DS:GL:BD 0.84935898 1
1 187133652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0458;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0002;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 187133750 . G GAA 6710 PASS INDEL;BAVGPOST=0.830;BRSQ=0.641;LDAF=0.3745;AVGPOST=0.8171;RSQ=0.6504;ERATE=0.0990;THETA=0.0002;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 187133755 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4460;AVGPOST=0.9884;RSQ=0.9812;ERATE=0.0028;THETA=0.0002;AC=975;AN=2184 GT:DS:GL:BD 0.44642857 0
1 187133789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.3080;AVGPOST=0.9927;RSQ=0.9876;ERATE=0.0006;THETA=0.0003;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 187134062 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0200;AVGPOST=0.9994;RSQ=0.9877;ERATE=0.0002;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 187134095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187134096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7320;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187134212 rs75995609 CAATGTAT C 24088 PASS INDEL;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1529;AVGPOST=0.9933;RSQ=0.9804;ERATE=0.0007;THETA=0.0003;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 187134246 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8953;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187134247 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.924;LDAF=0.0689;AVGPOST=0.9918;RSQ=0.9558;ERATE=0.0004;THETA=0.0001;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 187134269 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0275;AVGPOST=0.9994;RSQ=0.9905;ERATE=0.0004;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 187134368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0134;AVGPOST=0.9984;RSQ=0.9586;ERATE=0.0002;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 187134454 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0216;AVGPOST=0.9988;RSQ=0.9805;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187134468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2892;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 187134547 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5547;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187134629 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7988;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187134671 rs59655466 C CA 1820 PASS INDEL;BAVGPOST=0.985;BRSQ=0.801;LDAF=0.0485;AVGPOST=0.9732;RSQ=0.7711;ERATE=0.0072;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 187134740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5237;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187134879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187134933 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.9201;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187134973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8768;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187135148 . ATTCT A 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7167;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187135336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0151;AVGPOST=0.9983;RSQ=0.9569;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 187135339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1518;AVGPOST=0.9979;RSQ=0.9937;ERATE=0.0003;THETA=0.0002;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 187135381 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0054;AVGPOST=0.9968;RSQ=0.7589;ERATE=0.0006;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187135415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187135438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2883;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 187135612 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1087;AVGPOST=0.9990;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 187135634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1512;AVGPOST=0.9985;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 187135743 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187135785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.7111;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187135834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187136000 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187136066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0266;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0002;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187136189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8436;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187136238 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2886;AVGPOST=0.9965;RSQ=0.9932;ERATE=0.0006;THETA=0.0003;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 187136336 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0209;AVGPOST=0.9992;RSQ=0.9836;ERATE=0.0004;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 187136495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.895;BRSQ=0.322;LDAF=0.1098;AVGPOST=0.8708;RSQ=0.5100;ERATE=0.0058;THETA=0.0006;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 187136627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.889;BRSQ=0.723;LDAF=0.7201;AVGPOST=0.8055;RSQ=0.6413;ERATE=0.0213;THETA=0.0003;AC=1683;AN=2184 GT:DS:GL:BD 0.77060437 1
1 187136712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6307;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187136726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8396;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187136829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1875;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 187136860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187136861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0266;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187136887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1107;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0004;THETA=0.0002;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 187137026 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0110;AVGPOST=0.9996;RSQ=0.9847;ERATE=0.0002;THETA=0.0001;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187137052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.6960;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=1522;AN=2184 GT:DS:GL:BD 0.69688642 1
1 187137060 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8778;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187137111 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187137145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0266;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187137248 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187137362 . GAAGTTCC G 345 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8344;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187137397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2884;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0005;THETA=0.0001;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 187137495 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6968;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=1524;AN=2184 GT:DS:GL:BD 0.69780219 1
1 187137531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7305;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187137568 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0266;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187137675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0275;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0003;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 187137720 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187137746 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7576;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187137768 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187137894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2891;AVGPOST=0.9968;RSQ=0.9943;ERATE=0.0004;THETA=0.0002;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 187137946 . T TA 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5134;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187137988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187137999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187138089 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5924;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187138121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7666;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187138139 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1793;AVGPOST=0.9979;RSQ=0.9943;ERATE=0.0005;THETA=0.0002;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 187138195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1787;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 187138343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.905;LDAF=0.0259;AVGPOST=0.9984;RSQ=0.9770;ERATE=0.0004;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 187138437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8202;ERATE=0.0004;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187138509 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.701;LDAF=0.0054;AVGPOST=0.9987;RSQ=0.8963;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187138611 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0067;AVGPOST=0.9992;RSQ=0.9473;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187138611 . T TA 192 PASS INDEL;BAVGPOST=0.864;BRSQ=0.477;LDAF=0.0874;AVGPOST=0.9116;RSQ=0.6029;ERATE=0.0056;THETA=0.0003;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 187138739 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9299;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187138843 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7515;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187138848 . CAG C 46 PASS INDEL;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187138863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8482;AVGPOST=0.9992;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=1854;AN=2184 GT:DS:GL:BD 0.84890109 1
1 187138920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0467;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0002;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 187138993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187139155 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7504;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187139278 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0222;AVGPOST=0.9977;RSQ=0.9661;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187139415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0266;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0002;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187139479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187139548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187139692 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187139882 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0073;AVGPOST=0.9968;RSQ=0.8072;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187139895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0276;AVGPOST=0.9996;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 187140390 . AAT A 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0033;AVGPOST=0.9956;RSQ=0.4830;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187140411 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5759;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187140449 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0075;AVGPOST=0.9986;RSQ=0.9365;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187140510 . A AT 2893 PASS INDEL;BAVGPOST=0.978;BRSQ=0.948;LDAF=0.2807;AVGPOST=0.9853;RSQ=0.9738;ERATE=0.0008;THETA=0.0004;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 187140513 rs80204661 T TC 29230 PASS INDEL;BAVGPOST=0.987;BRSQ=0.970;LDAF=0.2843;AVGPOST=0.9910;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 187140515 . C CT 2622 PASS INDEL;BAVGPOST=0.981;BRSQ=0.958;LDAF=0.2777;AVGPOST=0.9784;RSQ=0.9610;ERATE=0.0018;THETA=0.0002;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 187140608 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9748;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187140682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8672;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187140685 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9380;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187140711 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1177;AVGPOST=0.9984;RSQ=0.9928;ERATE=0.0004;THETA=0.0007;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 187140740 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.3042;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 187140753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0266;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187140754 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5085;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187140775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9987;RSQ=0.9953;ERATE=0.0002;THETA=0.0003;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 187140781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6937;AVGPOST=0.9961;RSQ=0.9934;ERATE=0.0004;THETA=0.0003;AC=1516;AN=2184 GT:DS:GL:BD 0.69413918 1
1 187140783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0212;AVGPOST=0.9996;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 187140792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5756;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187140818 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1521;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 187140873 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187141023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.4783;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187141031 . A AG 61 PASS INDEL;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8833;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187141100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8710;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187141119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0071;AVGPOST=0.9979;RSQ=0.8867;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187141165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9025;ERATE=0.0009;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187141200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.1098;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 187141258 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.613;LDAF=0.0183;AVGPOST=0.9815;RSQ=0.5984;ERATE=0.0088;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 187141263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6333;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187141534 rs71557883 CTG C 27646 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1493;AVGPOST=0.9977;RSQ=0.9932;ERATE=0.0005;THETA=0.0001;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 187141618 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0267;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0004;THETA=0.0001;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187141671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2009;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0003;THETA=0.0009;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 187141712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0103;AVGPOST=0.9980;RSQ=0.9253;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 187141754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5826;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187141798 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8201;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187141904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5937;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187141947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0036;AVGPOST=0.9976;RSQ=0.7807;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187142135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.903;LDAF=0.0160;AVGPOST=0.9974;RSQ=0.9433;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 187142193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8625;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187142202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9628;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187142282 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8777;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187142315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2008;AVGPOST=0.9977;RSQ=0.9940;ERATE=0.0005;THETA=0.0003;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 187142340 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4548;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187142353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0064;AVGPOST=0.9966;RSQ=0.8011;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187142367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1790;AVGPOST=0.9976;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 187142381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0466;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0002;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 187142385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3425;ERATE=0.0008;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187142393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0258;AVGPOST=0.9980;RSQ=0.9688;ERATE=0.0005;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 187142445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3144;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0005;THETA=0.0003;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 187142523 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0278;AVGPOST=0.9992;RSQ=0.9892;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 187142531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1088;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0003;THETA=0.0001;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 187142545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9302;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187142617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187142882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7851;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187142938 . AT A 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0028;AVGPOST=0.9958;RSQ=0.4716;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187142984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2882;AVGPOST=0.9966;RSQ=0.9931;ERATE=0.0006;THETA=0.0004;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 187143003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0274;AVGPOST=0.9982;RSQ=0.9756;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187143048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5954;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187143054 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0166;AVGPOST=0.9986;RSQ=0.9629;ERATE=0.0004;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 187143126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0202;AVGPOST=0.9989;RSQ=0.9765;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 187143288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187143314 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8467;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187143382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6843;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187143390 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7136;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187143400 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187143433 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2876;AVGPOST=0.9965;RSQ=0.9932;ERATE=0.0006;THETA=0.0004;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 187143450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187143479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7426;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187143568 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8573;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187143586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0265;AVGPOST=0.9996;RSQ=0.9941;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187143591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1312;AVGPOST=0.9966;RSQ=0.9898;ERATE=0.0004;THETA=0.0002;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 187143621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8811;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187143778 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7100;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187143909 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187143932 . GAATA G 869 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0133;AVGPOST=0.9988;RSQ=0.9650;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 187143954 . A AAT 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4668;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187143963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0466;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 187144017 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0048;AVGPOST=0.9989;RSQ=0.9005;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187144043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9973;RSQ=0.3140;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 187144054 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7019;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187144060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0215;AVGPOST=0.9989;RSQ=0.9822;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187144094 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8473;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187144160 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9463;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187144171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0199;AVGPOST=0.9993;RSQ=0.9846;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 187144238 . TTAA T 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7275;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187144281 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2874;AVGPOST=0.9981;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 187144294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0076;AVGPOST=0.9979;RSQ=0.9060;ERATE=0.0003;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187144348 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6983;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187144387 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0269;AVGPOST=0.9990;RSQ=0.9805;ERATE=0.0005;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187144451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2138;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0006;THETA=0.0005;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 187144453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1528;AVGPOST=0.9977;RSQ=0.9920;ERATE=0.0004;THETA=0.0004;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 187144505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6106;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187144516 . G GT 2811 PASS INDEL;BAVGPOST=0.983;BRSQ=0.866;LDAF=0.0720;AVGPOST=0.9546;RSQ=0.7526;ERATE=0.0077;THETA=0.0004;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 187144650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9120;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187144867 . AG A 462 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.7935;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187144980 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5170;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187145034 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7845;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187145148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5335;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187145235 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.5037;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187145537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1505;AVGPOST=0.9963;RSQ=0.9902;ERATE=0.0003;THETA=0.0004;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 187145588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.944;LDAF=0.0269;AVGPOST=0.9983;RSQ=0.9747;ERATE=0.0004;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187145597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0266;AVGPOST=0.9996;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187145615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.911;LDAF=0.4273;AVGPOST=0.9551;RSQ=0.9291;ERATE=0.0055;THETA=0.0006;AC=937;AN=2184 GT:DS:GL:BD 0.42902932 0
1 187145749 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187145753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0094;AVGPOST=0.9963;RSQ=0.8469;ERATE=0.0008;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 187145786 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2883;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0005;THETA=0.0001;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 187145859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9402;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187145987 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5596;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187146065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187146108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8479;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187146116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187146157 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.836;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9765;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187146183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5420;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187146200 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.8028;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187146233 rs57592159 T TTG 6876 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0284;AVGPOST=0.9986;RSQ=0.9808;ERATE=0.0003;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 187146288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6684;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187146345 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187146451 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9035;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187146498 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187146616 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0215;AVGPOST=0.9990;RSQ=0.9827;ERATE=0.0004;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187146713 . A AG 177 PASS INDEL;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187146817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6838;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187146860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1341;AVGPOST=0.9984;RSQ=0.9937;ERATE=0.0005;THETA=0.0003;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 187146882 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7096;AVGPOST=0.9963;RSQ=0.9918;ERATE=0.0008;THETA=0.0004;AC=1552;AN=2184 GT:DS:GL:BD 0.71062273 1
1 187147141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.438;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7332;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187147239 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.5786;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187147268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7115;AVGPOST=0.9971;RSQ=0.9946;ERATE=0.0005;THETA=0.0003;AC=1555;AN=2184 GT:DS:GL:BD 0.71199632 1
1 187147392 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.515;LDAF=0.0035;AVGPOST=0.9962;RSQ=0.6272;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187147478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0587;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 187147516 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0068;AVGPOST=0.9997;RSQ=0.9816;ERATE=0.0002;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187147666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.9116;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187147828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8024;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187147903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0270;AVGPOST=0.9990;RSQ=0.9894;ERATE=0.0002;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 187147946 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.8897;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187148013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1089;AVGPOST=0.9994;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 187148216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5001;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187148242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0266;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187148266 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0266;AVGPOST=0.9997;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187148340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.7127;ERATE=0.0017;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187148343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7189;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187148464 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187148491 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1327;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 187148526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0073;AVGPOST=0.9992;RSQ=0.9477;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187148577 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7219;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187148657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4467;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187148680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187148819 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2879;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0003;THETA=0.0014;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 187148864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6445;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187148976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187149005 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187149097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0588;AVGPOST=0.9994;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 187149104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.870;LDAF=0.0258;AVGPOST=0.9974;RSQ=0.9600;ERATE=0.0004;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 187149151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7067;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187149199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4066;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187149239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6441;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187149306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0029;AVGPOST=0.9964;RSQ=0.5080;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187149399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187149434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0468;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 187149462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.915;LDAF=0.0349;AVGPOST=0.9963;RSQ=0.9528;ERATE=0.0003;THETA=0.0007;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 187149545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0230;AVGPOST=0.9979;RSQ=0.9668;ERATE=0.0004;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187149659 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5916;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187149738 . C CT 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4327;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187149744 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7813;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187149851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.1903;AVGPOST=0.9935;RSQ=0.9845;ERATE=0.0007;THETA=0.0003;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 187149861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9983;RSQ=0.9088;ERATE=0.0002;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187149906 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5093;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187149914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4821;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187149970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6430;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187149980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0026;AVGPOST=0.9961;RSQ=0.4934;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187150020 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0067;AVGPOST=0.9992;RSQ=0.9414;ERATE=0.0004;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187150021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187150083 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.628;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7952;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187150084 rs113612221 AGT A 4502 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0267;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187150213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187150366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7907;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187150406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3155;AVGPOST=0.9968;RSQ=0.9939;ERATE=0.0005;THETA=0.0004;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 187150561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187150736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9990;RSQ=0.9403;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187150752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0071;AVGPOST=0.9996;RSQ=0.9723;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187150845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0049;AVGPOST=0.9983;RSQ=0.8542;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187150881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0217;AVGPOST=0.9991;RSQ=0.9812;ERATE=0.0002;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187151002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6952;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187151199 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7454;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187151364 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5540;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187151377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0276;AVGPOST=0.9979;RSQ=0.9748;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187151395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0468;AVGPOST=0.9994;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 187151439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2512;AVGPOST=0.9959;RSQ=0.9912;ERATE=0.0010;THETA=0.0007;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 187151525 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9223;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187151526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.5875;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187151557 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0261;AVGPOST=0.9990;RSQ=0.9876;ERATE=0.0003;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 187151572 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0277;AVGPOST=0.9984;RSQ=0.9770;ERATE=0.0003;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 187151588 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8463;AVGPOST=0.9965;RSQ=0.9903;ERATE=0.0004;THETA=0.0003;AC=1850;AN=2184 GT:DS:GL:BD 0.84706962 1
1 187151628 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9989;RSQ=0.2231;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 187151639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1330;AVGPOST=0.9978;RSQ=0.9922;ERATE=0.0005;THETA=0.0005;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 187151662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0274;AVGPOST=0.9995;RSQ=0.9919;ERATE=0.0002;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 187151704 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6241;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187151706 . AC A 178 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187151804 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8498;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187151833 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187151922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187151940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2129;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 187151969 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5682;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187151971 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187151994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0266;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187152026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9625;ERATE=0.0002;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 187152124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0266;AVGPOST=0.9996;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187152263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187152398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0470;AVGPOST=0.9993;RSQ=0.9937;ERATE=0.0003;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 187152411 . C CA 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187152464 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187152516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6016;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187152533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2867;AVGPOST=0.9975;RSQ=0.9951;ERATE=0.0004;THETA=0.0002;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 187152558 . TA T 556 PASS INDEL;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0048;AVGPOST=0.9961;RSQ=0.6743;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187152574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.825;LDAF=0.0062;AVGPOST=0.9984;RSQ=0.8943;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187152637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9873;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187152647 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9325;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187152676 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0216;AVGPOST=0.9985;RSQ=0.9747;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187152738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187152813 . TA T 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187152821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187152861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.7143;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187152964 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8739;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187153001 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0057;AVGPOST=0.9985;RSQ=0.9186;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187153025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187153079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.6283;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187153082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.975;LDAF=0.2123;AVGPOST=0.9980;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 187153134 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2131;AVGPOST=0.9983;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 187153195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4264;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187153234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1323;AVGPOST=0.9984;RSQ=0.9948;ERATE=0.0002;THETA=0.0008;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 187153340 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4815;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187153462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.7944;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187153483 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6662;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187153497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.7021;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187153598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0578;AVGPOST=0.9985;RSQ=0.9906;ERATE=0.0004;THETA=0.0002;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 187153760 . A AT 422 PASS INDEL;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9138;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187153908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0463;AVGPOST=0.9990;RSQ=0.9916;ERATE=0.0003;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 187153944 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8473;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187154092 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0265;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0002;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187154100 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6633;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187154166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9870;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187154205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9362;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187154302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187154303 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3138;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 187154314 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1509;AVGPOST=0.9968;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 187154386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0225;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187154470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6956;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=1521;AN=2184 GT:DS:GL:BD 0.69642860 1
1 187154651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0079;AVGPOST=0.9977;RSQ=0.8761;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187154662 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7827;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187154682 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3144;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 187154830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187154882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0213;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0002;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187154924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187154933 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0214;AVGPOST=0.9992;RSQ=0.9866;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187154956 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5353;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187155015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5736;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187155053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0203;AVGPOST=0.9985;RSQ=0.9698;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 187155089 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0046;AVGPOST=0.9969;RSQ=0.7262;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187155115 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0115;AVGPOST=0.9996;RSQ=0.9846;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 187155184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6880;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187155296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6981;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187155379 rs58310590 C CT 5352 PASS INDEL;BAVGPOST=0.988;BRSQ=0.910;LDAF=0.0699;AVGPOST=0.9831;RSQ=0.9075;ERATE=0.0023;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 187155447 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4518;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187155583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0278;AVGPOST=0.9989;RSQ=0.9834;ERATE=0.0004;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 187155629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2410;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 187155633 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0225;AVGPOST=0.9980;RSQ=0.9643;ERATE=0.0004;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187155635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.658;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187155776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0584;AVGPOST=0.9986;RSQ=0.9904;ERATE=0.0004;THETA=0.0004;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 187155803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5707;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187155855 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187155868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187155926 . CAG C 209 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8846;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187156027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.969;LDAF=0.3143;AVGPOST=0.9915;RSQ=0.9844;ERATE=0.0015;THETA=0.0003;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 187156187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8480;AVGPOST=0.9977;RSQ=0.9934;ERATE=0.0003;THETA=0.0007;AC=1855;AN=2184 GT:DS:GL:BD 0.84935898 1
1 187156247 . CTT C 151 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5695;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187156254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187156374 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 187156394 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0265;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0002;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187156399 . GAC G 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5584;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187156413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.9977;AVGPOST=0.9994;RSQ=0.8919;ERATE=0.0002;THETA=0.0003;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 187156420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8781;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187156451 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9702;ERATE=0.0002;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 187156479 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0177;AVGPOST=0.9991;RSQ=0.9802;ERATE=0.0002;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 187156504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187156567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8476;AVGPOST=0.9964;RSQ=0.9902;ERATE=0.0003;THETA=0.0008;AC=1855;AN=2184 GT:DS:GL:BD 0.84935898 1
1 187156637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1178;AVGPOST=0.9979;RSQ=0.9908;ERATE=0.0004;THETA=0.0003;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 187156738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6266;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187157192 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3153;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0004;THETA=0.0007;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 187157450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187157483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6983;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187157552 . T TA 2150 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0290;AVGPOST=0.9976;RSQ=0.9675;ERATE=0.0004;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 187157617 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0266;AVGPOST=0.9996;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187157709 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0082;AVGPOST=0.9986;RSQ=0.9313;ERATE=0.0004;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 187157896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1097;AVGPOST=0.9960;RSQ=0.9847;ERATE=0.0007;THETA=0.0004;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 187157959 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0227;AVGPOST=0.9994;RSQ=0.9876;ERATE=0.0002;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187158006 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0063;AVGPOST=0.9997;RSQ=0.9779;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187158030 . GT G 4287 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0236;AVGPOST=0.9991;RSQ=0.9829;ERATE=0.0003;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 187158066 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5713;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187158243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8114;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187158284 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0037;AVGPOST=0.9969;RSQ=0.6793;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187158296 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9319;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187158423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0268;AVGPOST=0.9994;RSQ=0.9899;ERATE=0.0004;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187158589 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0466;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0002;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 187158604 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2006;AVGPOST=0.9966;RSQ=0.9922;ERATE=0.0004;THETA=0.0004;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 187158636 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187158671 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1502;AVGPOST=0.9984;RSQ=0.9944;ERATE=0.0002;THETA=0.0002;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 187158710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7827;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187158894 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187158920 rs79429650 CA C 25262 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2883;AVGPOST=0.9958;RSQ=0.9918;ERATE=0.0005;THETA=0.0004;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 187159050 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0068;AVGPOST=0.9979;RSQ=0.8945;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187159070 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187159077 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5967;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187159172 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6034;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187159208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0267;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0003;THETA=0.0007;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187159389 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187159531 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187159548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5646;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187159565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1113;AVGPOST=0.9968;RSQ=0.9869;ERATE=0.0005;THETA=0.0003;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 187159620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0586;AVGPOST=0.9986;RSQ=0.9899;ERATE=0.0006;THETA=0.0006;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 187159643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5584;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187159761 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8806;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187159777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5771;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187159808 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7609;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187159968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6191;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187159988 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187160001 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0200;AVGPOST=0.9994;RSQ=0.9869;ERATE=0.0003;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 187160156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0460;AVGPOST=0.9982;RSQ=0.9866;ERATE=0.0002;THETA=0.0035;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 187160158 . T TC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0061;AVGPOST=0.9931;RSQ=0.5873;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187160273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7868;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187160323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7010;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187160358 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9432;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187160419 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9554;ERATE=0.0002;THETA=0.0034;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187160536 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9169;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187160696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5673;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187160709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187160740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0268;AVGPOST=0.9994;RSQ=0.9914;ERATE=0.0003;THETA=0.0012;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 187160841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9576;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187160953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6324;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187160963 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0112;AVGPOST=0.9904;RSQ=0.6815;ERATE=0.0007;THETA=0.0100;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 187160984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0228;AVGPOST=0.9966;RSQ=0.9464;ERATE=0.0004;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187160989 . ATTAAT A 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4446;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187161028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187161451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0578;AVGPOST=0.9990;RSQ=0.9924;ERATE=0.0003;THETA=0.0025;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 187161492 . CATAAT C 57 PASS INDEL;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6547;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187161531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6082;ERATE=0.0002;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187161564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0286;AVGPOST=0.9994;RSQ=0.9898;ERATE=0.0004;THETA=0.0018;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 187161646 . G GA 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4552;ERATE=0.0006;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187161657 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9070;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187161754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0178;AVGPOST=0.9991;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 187161863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.5055;AVGPOST=0.9806;RSQ=0.9730;ERATE=0.0016;THETA=0.0003;AC=1111;AN=2184 GT:DS:GL:BD 0.50869966 1
1 187161882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6033;ERATE=0.0004;THETA=0.0087;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187161887 . A AT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4610;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187161983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0387;AVGPOST=0.9986;RSQ=0.9865;ERATE=0.0004;THETA=0.0030;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 187162184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7777;ERATE=0.0003;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187162205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.5010;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187162208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0219;AVGPOST=0.9991;RSQ=0.9828;ERATE=0.0002;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187162292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.7994;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187162655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187162845 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.500;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7840;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187162871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.6814;AVGPOST=0.9943;RSQ=0.9898;ERATE=0.0007;THETA=0.0005;AC=1491;AN=2184 GT:DS:GL:BD 0.68269229 1
1 187163019 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187163060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187163160 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0384;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0002;THETA=0.0005;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 187163189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0865;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0002;THETA=0.0020;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 187163207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5326;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187163261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1507;AVGPOST=0.9977;RSQ=0.9919;ERATE=0.0006;THETA=0.0004;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 187163369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7053;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187163478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187163507 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0602;AVGPOST=0.9992;RSQ=0.9949;ERATE=0.0002;THETA=0.0003;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 187163544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6435;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0004;THETA=0.0005;AC=1405;AN=2184 GT:DS:GL:BD 0.64331502 1
1 187163588 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8516;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187163628 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7698;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187163851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7129;AVGPOST=0.9951;RSQ=0.9907;ERATE=0.0009;THETA=0.0003;AC=1560;AN=2184 GT:DS:GL:BD 0.71428573 1
1 187163974 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187163992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187164020 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7793;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187164043 . A AG 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187164048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9780;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187164180 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5537;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187164184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7136;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0003;THETA=0.0008;AC=1559;AN=2184 GT:DS:GL:BD 0.71382785 1
1 187164337 . G GTGTTT 32364 PASS INDEL;BAVGPOST=0.977;BRSQ=0.954;LDAF=0.7104;AVGPOST=0.9930;RSQ=0.9869;ERATE=0.0008;THETA=0.0002;AC=1554;AN=2184 GT:DS:GL:BD 0.71153843 1
1 187164339 rs10624505 G GTTTTC 103742 PASS INDEL;BAVGPOST=0.982;BRSQ=0.963;LDAF=0.7078;AVGPOST=0.9908;RSQ=0.9838;ERATE=0.0008;THETA=0.0003;AC=1548;AN=2184 GT:DS:GL:BD 0.70879120 1
1 187164340 rs67146687 T TTTTC 67507 PASS INDEL;BAVGPOST=0.963;BRSQ=0.924;LDAF=0.6757;AVGPOST=0.9210;RSQ=0.8689;ERATE=0.0166;THETA=0.0003;AC=1513;AN=2184 GT:DS:GL:BD 0.69276559 1
1 187164458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187164500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187164570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7972;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187164585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187164662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7149;AVGPOST=0.9979;RSQ=0.9955;ERATE=0.0008;THETA=0.0024;AC=1561;AN=2184 GT:DS:GL:BD 0.71474361 1
1 187164746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187164747 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.739;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8179;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187164751 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187165025 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7157;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0003;THETA=0.0013;AC=1563;AN=2184 GT:DS:GL:BD 0.71565932 1
1 187165290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0878;AVGPOST=0.9984;RSQ=0.9942;ERATE=0.0002;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 187165318 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187165336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6756;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187165378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8852;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187165402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187165499 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6686;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187165614 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7835;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187165621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5847;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187165640 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.740;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7557;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187165657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7103;AVGPOST=0.9915;RSQ=0.9846;ERATE=0.0015;THETA=0.0002;AC=1554;AN=2184 GT:DS:GL:BD 0.71153843 1
1 187165675 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9504;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187165692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5515;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187165742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.557;LDAF=0.0163;AVGPOST=0.9848;RSQ=0.6419;ERATE=0.0035;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 187165753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.889;LDAF=0.2098;AVGPOST=0.9798;RSQ=0.9519;ERATE=0.0006;THETA=0.0003;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 187165874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0255;AVGPOST=0.9983;RSQ=0.9725;ERATE=0.0004;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 187165943 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6548;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187165989 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0590;AVGPOST=0.9988;RSQ=0.9912;ERATE=0.0005;THETA=0.0006;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 187166005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.0191;AVGPOST=0.9947;RSQ=0.8911;ERATE=0.0004;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 187166012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7676;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187166044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.7146;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0003;THETA=0.0008;AC=1561;AN=2184 GT:DS:GL:BD 0.71474361 1
1 187166095 . TC T 2248 PASS INDEL;BAVGPOST=0.996;BRSQ=0.908;LDAF=0.0231;AVGPOST=0.9980;RSQ=0.9634;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187166206 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6814;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187166340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7742;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187166424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6057;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187166506 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0713;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0003;THETA=0.0008;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 187166507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9064;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187166571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5911;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187166602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187166645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.778;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.8385;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187166683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.689;LDAF=0.0051;AVGPOST=0.9968;RSQ=0.7565;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187166765 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6773;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187166879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.675;LDAF=0.0039;AVGPOST=0.9949;RSQ=0.5089;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187167058 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0060;AVGPOST=0.9939;RSQ=0.5905;ERATE=0.0008;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187167068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3938;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187167073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.635;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5124;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187167301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.728;LDAF=0.0065;AVGPOST=0.9991;RSQ=0.9355;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187167443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187167536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7154;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=1561;AN=2184 GT:DS:GL:BD 0.71474361 1
1 187167557 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8435;ERATE=0.0005;THETA=0.0028;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187167569 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6525;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187167595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5758;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187167685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6443;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0005;THETA=0.0007;AC=1406;AN=2184 GT:DS:GL:BD 0.64377290 1
1 187167724 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0226;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0002;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187167732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187167809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7143;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0005;THETA=0.0003;AC=1560;AN=2184 GT:DS:GL:BD 0.71428573 1
1 187167816 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0325;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0002;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 187167817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0385;AVGPOST=0.9997;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 187167850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0585;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0002;THETA=0.0007;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 187167925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187167967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0325;AVGPOST=0.9997;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 187167973 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0253;AVGPOST=0.9989;RSQ=0.9828;ERATE=0.0004;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 187168008 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187168075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187168153 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0324;AVGPOST=0.9995;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 187168194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187168304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7148;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=1561;AN=2184 GT:DS:GL:BD 0.71474361 1
1 187168422 . TG T 745 PASS INDEL;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0073;AVGPOST=0.9975;RSQ=0.8889;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187168436 . TTTG T 206 PASS INDEL;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0063;AVGPOST=0.9940;RSQ=0.6700;ERATE=0.0013;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187168503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187168550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0877;AVGPOST=0.9975;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 187168564 . T TA 13193 PASS INDEL;BAVGPOST=0.952;BRSQ=0.922;LDAF=0.5258;AVGPOST=0.9269;RSQ=0.8952;ERATE=0.0191;THETA=0.0002;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 187168565 rs55633854 A AT 63439 PASS INDEL;BAVGPOST=0.977;BRSQ=0.964;LDAF=0.5606;AVGPOST=0.9824;RSQ=0.9742;ERATE=0.0035;THETA=0.0004;AC=1223;AN=2184 GT:DS:GL:BD 0.55998170 1
1 187168662 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5916;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187168821 MERGED_DEL_2_6565 TATTGGGTATATACCCAAAGGAAAATAAATTATTCTACAAAAGAGACACAAGAACTCTTTTTTTTTTTTTTTTTTTGACAGGGTCTCACTCTGTTGCCCAGGCTGGAGTGCATTGGCATGATCTCAGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGAGATTCTCCTGCCTCATCCCCCTGAGTAGCTG T . . SV;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0028;AVGPOST=0.9970;RSQ=0.5342;ERATE=0.0005;THETA=0.0004;CIEND=-79,74;CIPOS=-98,59;END=187170414;HOMLEN=0;HOMSEQ;SOURCE=BreakDancer_187168812_187170400,Ge GT:DS:GL:BD 0.00137363 0
1 187168952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6420;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187169175 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.5299;ERATE=0.0006;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187169190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0059;AVGPOST=0.9980;RSQ=0.8622;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187169277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0775;AVGPOST=0.9975;RSQ=0.9867;ERATE=0.0005;THETA=0.0004;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 187169364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187169376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6924;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187169443 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6942;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187169483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.9972;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0002;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 187169508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6440;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=1408;AN=2184 GT:DS:GL:BD 0.64468867 1
1 187169674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.480;LDAF=0.9715;AVGPOST=0.9689;RSQ=0.5746;ERATE=0.0036;THETA=0.0003;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 187169762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0254;AVGPOST=0.9980;RSQ=0.9705;ERATE=0.0004;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 187169815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8283;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187169865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.9971;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0003;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 187169923 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5164;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187169983 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.929;LDAF=0.6065;AVGPOST=0.9423;RSQ=0.9185;ERATE=0.0202;THETA=0.0004;AC=1342;AN=2184 GT:DS:GL:BD 0.61446887 1
1 187170167 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.964;LDAF=0.7677;AVGPOST=0.9658;RSQ=0.9350;ERATE=0.0065;THETA=0.0007;AC=1687;AN=2184 GT:DS:GL:BD 0.77243590 1
1 187170170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0271;AVGPOST=0.9972;RSQ=0.9607;ERATE=0.0005;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 187170188 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7274;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187170280 . AG A 28715 PASS INDEL;BAVGPOST=0.985;BRSQ=0.946;LDAF=0.8656;AVGPOST=0.9903;RSQ=0.9653;ERATE=0.0008;THETA=0.0002;AC=1895;AN=2184 GT:DS:GL:BD 0.86767399 1
1 187170281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.953;LDAF=0.8657;AVGPOST=0.9901;RSQ=0.9639;ERATE=0.0011;THETA=0.0003;AC=1898;AN=2184 GT:DS:GL:BD 0.86904764 1
1 187170281 . G GA 11167 PASS INDEL;BAVGPOST=0.825;BRSQ=0.608;LDAF=0.6621;AVGPOST=0.7312;RSQ=0.5073;ERATE=0.0456;THETA=0.0004;AC=1523;AN=2184 GT:DS:GL:BD 0.69734430 1
1 187170425 rs34677661 CAG C 2263 PASS INDEL;BAVGPOST=0.996;BRSQ=0.925;LDAF=0.0248;AVGPOST=0.9985;RSQ=0.9744;ERATE=0.0004;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 187170525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6802;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187170543 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187170546 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7935;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187170583 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187170672 . ATGT A 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187170693 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187170882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7657;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187170894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187171038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7858;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187171059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4701;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187171106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6349;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187171170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8717;ERATE=0.0002;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187171193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187171376 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187171514 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7727;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187171516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8801;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187171723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8800;ERATE=0.0004;THETA=0.0020;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187171780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6369;AVGPOST=0.9980;RSQ=0.9966;ERATE=0.0006;THETA=0.0003;AC=1390;AN=2184 GT:DS:GL:BD 0.63644689 1
1 187171788 . C CA 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0029;AVGPOST=0.9971;RSQ=0.6008;ERATE=0.0006;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187171805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5985;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187171994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0029;AVGPOST=0.9952;RSQ=0.3430;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187172077 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9981;RSQ=0.9045;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187172127 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.7796;AVGPOST=0.9974;RSQ=0.9940;ERATE=0.0010;THETA=0.0006;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 187172172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187172195 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.813;LDAF=0.0089;AVGPOST=0.9968;RSQ=0.8457;ERATE=0.0006;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187172329 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3157;AVGPOST=0.9932;RSQ=0.9876;ERATE=0.0005;THETA=0.0005;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 187172499 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1227;AVGPOST=0.9968;RSQ=0.9891;ERATE=0.0004;THETA=0.0003;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 187172562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0098;AVGPOST=0.9989;RSQ=0.9518;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 187172692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6487;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187172731 . CA C 137 PASS INDEL;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8145;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187172738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1229;AVGPOST=0.9965;RSQ=0.9881;ERATE=0.0005;THETA=0.0005;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 187172801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5841;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187172805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9339;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187172943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6088;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187173081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6494;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187173129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5778;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187173215 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7787;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0005;THETA=0.0003;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 187173299 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7787;AVGPOST=0.9968;RSQ=0.9937;ERATE=0.0005;THETA=0.0006;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 187173341 . ATTC A 4321 PASS INDEL;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0234;AVGPOST=0.9979;RSQ=0.9602;ERATE=0.0005;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187173592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6628;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187173607 . AT A 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7961;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187173690 . CA C 61 PASS INDEL;BAVGPOST=0.980;BRSQ=0.479;LDAF=0.0556;AVGPOST=0.9264;RSQ=0.4456;ERATE=0.0084;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 187173742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7966;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187173749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187173843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187173895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187173981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0590;AVGPOST=0.9990;RSQ=0.9941;ERATE=0.0002;THETA=0.0004;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 187174014 . G GC 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187174066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6620;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187174202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187174216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7164;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187174298 . CTCAT C 128 PASS INDEL;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187174321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187174372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8868;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187174574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8665;AVGPOST=0.9985;RSQ=0.9949;ERATE=0.0004;THETA=0.0002;AC=1894;AN=2184 GT:DS:GL:BD 0.86721611 1
1 187174598 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0146;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0002;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 187174681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3782;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 187174719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0345;AVGPOST=0.9980;RSQ=0.9766;ERATE=0.0003;THETA=0.0008;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 187174803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187174939 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 187175038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8673;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187175049 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0587;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 187175135 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0587;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 187175439 . TG T 213 PASS INDEL;BAVGPOST=0.982;BRSQ=0.655;LDAF=0.0333;AVGPOST=0.9643;RSQ=0.5850;ERATE=0.0046;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 187175442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.962;LDAF=0.1065;AVGPOST=0.9975;RSQ=0.9896;ERATE=0.0005;THETA=0.0005;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 187175446 . AAAG A 2954 PASS INDEL;BAVGPOST=0.995;BRSQ=0.897;LDAF=0.0266;AVGPOST=0.9947;RSQ=0.9237;ERATE=0.0007;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 187175486 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8419;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187175513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6850;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187175521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187175565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0294;AVGPOST=0.9947;RSQ=0.9336;ERATE=0.0006;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 187175690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0193;AVGPOST=0.9979;RSQ=0.9557;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 187175691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.5748;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187175881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6184;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187175885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1302;AVGPOST=0.9984;RSQ=0.9943;ERATE=0.0003;THETA=0.0007;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 187175925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8665;AVGPOST=0.9987;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=1894;AN=2184 GT:DS:GL:BD 0.86721611 1
1 187175950 . C CT 453 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0121;AVGPOST=0.9926;RSQ=0.7926;ERATE=0.0005;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 187175976 . A AC 377 PASS INDEL;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7314;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187176015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7697;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187176052 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187176227 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0260;AVGPOST=0.9992;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 187176326 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7794;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=1702;AN=2184 GT:DS:GL:BD 0.77930403 1
1 187176342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6574;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187176349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5856;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187176370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7735;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187176504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6405;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187176548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0333;AVGPOST=0.9993;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 187176559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7793;AVGPOST=0.9978;RSQ=0.9955;ERATE=0.0003;THETA=0.0027;AC=1702;AN=2184 GT:DS:GL:BD 0.77930403 1
1 187176563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0859;AVGPOST=0.9989;RSQ=0.9948;ERATE=0.0003;THETA=0.0001;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 187176622 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187176642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7357;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187176752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7790;AVGPOST=0.9956;RSQ=0.9908;ERATE=0.0008;THETA=0.0006;AC=1702;AN=2184 GT:DS:GL:BD 0.77930403 1
1 187176767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4728;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187176787 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187176793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0596;AVGPOST=0.9986;RSQ=0.9915;ERATE=0.0003;THETA=0.0007;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 187176795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7840;AVGPOST=0.9985;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=1712;AN=2184 GT:DS:GL:BD 0.78388280 1
1 187176809 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0026;AVGPOST=0.9971;RSQ=0.5891;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187176811 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187176923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7964;AVGPOST=0.9977;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=1741;AN=2184 GT:DS:GL:BD 0.79716116 1
1 187176947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0577;AVGPOST=0.9981;RSQ=0.9883;ERATE=0.0003;THETA=0.0002;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 187177052 . A AGGCCT 324 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4250;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187177065 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9513;ERATE=0.0002;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187177097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187177105 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5367;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187177120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7677;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187177195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0151;AVGPOST=0.9995;RSQ=0.9826;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 187177198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9823;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187177230 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187177246 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0792;AVGPOST=0.9992;RSQ=0.9956;ERATE=0.0002;THETA=0.0003;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 187177304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2319;AVGPOST=0.9983;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 187177343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7428;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187177434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0844;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0002;THETA=0.0005;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 187177486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9152;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187177513 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0961;AVGPOST=0.9982;RSQ=0.9916;ERATE=0.0004;THETA=0.0026;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 187177558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4633;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187177598 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2321;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0004;THETA=0.0005;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 187177670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7567;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187177954 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5914;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187178012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7388;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187178013 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0031;AVGPOST=0.9977;RSQ=0.7033;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187178040 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1235;AVGPOST=0.9957;RSQ=0.9851;ERATE=0.0003;THETA=0.0003;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 187178072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0868;AVGPOST=0.9986;RSQ=0.9950;ERATE=0.0003;THETA=0.0026;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 187178161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6816;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187178263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.5664;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187178427 rs34544169 A AT 300 PASS INDEL;BAVGPOST=0.939;BRSQ=0.206;LDAF=0.1146;AVGPOST=0.8539;RSQ=0.4313;ERATE=0.0103;THETA=0.0006;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 187178430 rs5779323 TA T 244 PASS INDEL;BAVGPOST=0.912;BRSQ=0.148;LDAF=0.1079;AVGPOST=0.8579;RSQ=0.4191;ERATE=0.0074;THETA=0.0003;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 187178528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.637;LDAF=0.0074;AVGPOST=0.9954;RSQ=0.7292;ERATE=0.0010;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187178717 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.8108;AVGPOST=0.9947;RSQ=0.9854;ERATE=0.0005;THETA=0.0006;AC=1773;AN=2184 GT:DS:GL:BD 0.81181318 1
1 187178763 . CTG C 146 PASS INDEL;BAVGPOST=0.979;BRSQ=0.529;LDAF=0.0524;AVGPOST=0.9340;RSQ=0.4813;ERATE=0.0094;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 187178779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.961;LDAF=0.1106;AVGPOST=0.9932;RSQ=0.9728;ERATE=0.0005;THETA=0.0003;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 187178795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.529;LDAF=0.0053;AVGPOST=0.9937;RSQ=0.5482;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187178800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.751;LDAF=0.0897;AVGPOST=0.9483;RSQ=0.7486;ERATE=0.0089;THETA=0.0003;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 187178821 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0023;AVGPOST=0.9964;RSQ=0.4077;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187178873 . CTG C 26 PASS INDEL;BAVGPOST=0.994;BRSQ=0.634;LDAF=0.0154;AVGPOST=0.9806;RSQ=0.5128;ERATE=0.0048;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 187178935 . TA T 311 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0035;AVGPOST=0.9962;RSQ=0.5942;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187179022 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8731;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187179031 . T TA 14001 PASS INDEL;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.3622;AVGPOST=0.9882;RSQ=0.9829;ERATE=0.0005;THETA=0.0005;AC=792;AN=2184 GT:DS:GL:BD 0.36263737 0
1 187179032 rs5779325 A AC 39402 PASS INDEL;BAVGPOST=0.986;BRSQ=0.977;LDAF=0.3628;AVGPOST=0.9894;RSQ=0.9846;ERATE=0.0006;THETA=0.0006;AC=794;AN=2184 GT:DS:GL:BD 0.36355311 0
1 187179043 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.3633;AVGPOST=0.9917;RSQ=0.9880;ERATE=0.0003;THETA=0.0006;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 187179099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5941;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187179192 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6401;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187179267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4897;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187179298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.888;LDAF=0.0114;AVGPOST=0.9990;RSQ=0.9617;ERATE=0.0002;THETA=0.0032;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 187179341 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3625;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0005;THETA=0.0005;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 187179375 . TTG T 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6802;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187179388 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6758;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187179447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7662;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187179477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8500;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187179564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187179639 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0106;AVGPOST=0.9996;RSQ=0.9847;ERATE=0.0002;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 187179640 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0229;AVGPOST=0.9991;RSQ=0.9825;ERATE=0.0002;THETA=0.0011;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 187179648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0096;AVGPOST=0.9981;RSQ=0.9151;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 187179704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1081;AVGPOST=0.9981;RSQ=0.9920;ERATE=0.0005;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 187179711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4746;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187179781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.6653;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187179782 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.9050;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187179831 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187179885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187179914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0069;AVGPOST=0.9988;RSQ=0.9200;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 187179993 . AT A 92 PASS INDEL;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0046;AVGPOST=0.9950;RSQ=0.5840;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187180116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0218;AVGPOST=0.9994;RSQ=0.9887;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 187180130 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2204;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0003;THETA=0.0007;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 187180189 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3179;AVGPOST=0.9968;RSQ=0.9948;ERATE=0.0004;THETA=0.0005;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 187180197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0186;AVGPOST=0.9995;RSQ=0.9869;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 187180308 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7386;ERATE=0.0002;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187180322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0075;AVGPOST=0.9982;RSQ=0.9026;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 187180336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5996;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187180402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.6573;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187180503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7414;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187180591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8420;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187180751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0150;AVGPOST=0.9990;RSQ=0.9706;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 187180784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2340;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=510;AN=2184 GT:DS:GL:BD 0.23351648 0
1 187180790 . CATCTT C 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.2830;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187180915 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5788;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187180995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6652;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187181012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8895;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187181013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0745;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 187181021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0790;AVGPOST=0.9962;RSQ=0.9821;ERATE=0.0006;THETA=0.0002;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 187181851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6353;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187181866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9196;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187181906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0155;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0002;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 187181937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2525;AVGPOST=0.9972;RSQ=0.9934;ERATE=0.0010;THETA=0.0003;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 187181969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0060;AVGPOST=0.9977;RSQ=0.8478;ERATE=0.0003;THETA=0.0025;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187182027 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0074;AVGPOST=0.9973;RSQ=0.8801;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187182071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7780;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187182078 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187182085 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0590;AVGPOST=0.9989;RSQ=0.9916;ERATE=0.0004;THETA=0.0004;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 187182123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187182131 . G GA 529 PASS INDEL;BAVGPOST=0.998;BRSQ=0.749;LDAF=0.0063;AVGPOST=0.9955;RSQ=0.7827;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187182169 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4891;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187182177 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6569;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187182259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8587;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187182325 . T TA 79 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.3551;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187182414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5268;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187182519 . T TA 145 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6550;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187182634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187182668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4748;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187182703 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.7841;AVGPOST=0.9944;RSQ=0.9860;ERATE=0.0008;THETA=0.0005;AC=1713;AN=2184 GT:DS:GL:BD 0.78434068 1
1 187182748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0223;AVGPOST=0.9995;RSQ=0.9892;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187182761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1427;AVGPOST=0.9986;RSQ=0.9948;ERATE=0.0004;THETA=0.0004;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 187182929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8752;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187182947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.525;LDAF=0.0035;AVGPOST=0.9972;RSQ=0.6791;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187183135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3601;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0005;THETA=0.0004;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 187183293 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0051;AVGPOST=0.9965;RSQ=0.7267;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 187183377 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6227;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187183617 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7957;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187183728 . T TG 60 PASS INDEL;BAVGPOST=0.925;BRSQ=0.305;LDAF=0.0721;AVGPOST=0.9434;RSQ=0.7011;ERATE=0.0010;THETA=0.0005;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 187183775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.5712;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187184214 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0081;AVGPOST=0.9983;RSQ=0.9371;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 187184215 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0083;AVGPOST=0.9997;RSQ=0.9857;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 187184253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0766;AVGPOST=0.9992;RSQ=0.9947;ERATE=0.0003;THETA=0.0007;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 187184281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5941;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187184321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5835;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187184327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6765;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187184382 . CAT C 108 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187184444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187184751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8587;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187184791 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187184840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187184916 . C CA 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5360;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187185084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8440;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187185368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0052;AVGPOST=0.9973;RSQ=0.8342;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187185622 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.6460;ERATE=0.0003;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187185664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187185671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187185802 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0604;AVGPOST=0.9974;RSQ=0.9826;ERATE=0.0005;THETA=0.0003;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 187185990 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7443;ERATE=0.0002;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187186009 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187186048 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7430;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187186069 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.869;LDAF=0.3688;AVGPOST=0.9067;RSQ=0.8422;ERATE=0.0539;THETA=0.0023;AC=779;AN=2184 GT:DS:GL:BD 0.35668498 0
1 187186132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1434;AVGPOST=0.9972;RSQ=0.9901;ERATE=0.0004;THETA=0.0004;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 187186164 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.905;BRSQ=0.781;LDAF=0.6881;AVGPOST=0.8350;RSQ=0.7056;ERATE=0.0444;THETA=0.0009;AC=1566;AN=2184 GT:DS:GL:BD 0.71703297 1
1 187186238 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.892;LDAF=0.0756;AVGPOST=0.9945;RSQ=0.9677;ERATE=0.0008;THETA=0.0006;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 187186372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.579;LDAF=0.0031;AVGPOST=0.9953;RSQ=0.4036;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187186444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0140;AVGPOST=0.9986;RSQ=0.9576;ERATE=0.0002;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 187186616 . C CT 1018 PASS INDEL;BAVGPOST=0.926;BRSQ=0.779;LDAF=0.1839;AVGPOST=0.9563;RSQ=0.8882;ERATE=0.0005;THETA=0.0007;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 187186619 rs77634419 T TA 17685 PASS INDEL;BAVGPOST=0.975;BRSQ=0.936;LDAF=0.2627;AVGPOST=0.9755;RSQ=0.9485;ERATE=0.0039;THETA=0.0009;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 187186624 . A AC 348 PASS INDEL;BAVGPOST=0.926;BRSQ=0.777;LDAF=0.1764;AVGPOST=0.9462;RSQ=0.8612;ERATE=0.0018;THETA=0.0005;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 187186768 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2808;AVGPOST=0.9890;RSQ=0.9768;ERATE=0.0024;THETA=0.0002;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 187186771 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0084;AVGPOST=0.9987;RSQ=0.9318;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 187186843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6819;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187186844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7929;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187186879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187186966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0246;AVGPOST=0.9989;RSQ=0.9859;ERATE=0.0002;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 187187040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0033;AVGPOST=0.9994;RSQ=0.9194;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187187218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187187237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7838;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187187427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6899;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187187484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0240;AVGPOST=0.9996;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 187187546 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187187741 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8377;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187187754 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.821;LDAF=0.0061;AVGPOST=0.9993;RSQ=0.9471;ERATE=0.0003;THETA=0.0038;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187187762 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0588;AVGPOST=0.9984;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 187187821 . TC T 151 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187187824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.8220;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187187869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3195;AVGPOST=0.9971;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=698;AN=2184 GT:DS:GL:BD 0.31959707 0
1 187187919 . G GC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5122;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187188108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4800;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187188126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7058;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187188180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187188197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187188396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187188542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2566;AVGPOST=0.9967;RSQ=0.9928;ERATE=0.0007;THETA=0.0005;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 187188564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187188569 . CTTAAG C 359 PASS INDEL;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8851;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187188766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7273;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187188791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0212;AVGPOST=0.9997;RSQ=0.9928;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 187188870 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7842;AVGPOST=0.9939;RSQ=0.9864;ERATE=0.0004;THETA=0.0003;AC=1715;AN=2184 GT:DS:GL:BD 0.78525639 1
1 187188947 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0154;AVGPOST=0.9975;RSQ=0.9366;ERATE=0.0002;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 187189129 . A ACAAT 5617 PASS INDEL;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0184;AVGPOST=0.9996;RSQ=0.9911;ERATE=0.0003;THETA=0.0040;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 187189148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187189317 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7082;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187189343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8016;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187189374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.959;LDAF=0.8406;AVGPOST=0.9933;RSQ=0.9830;ERATE=0.0004;THETA=0.0003;AC=1839;AN=2184 GT:DS:GL:BD 0.84203297 1
1 187189381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0156;AVGPOST=0.9993;RSQ=0.9789;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 187189385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0155;AVGPOST=0.9996;RSQ=0.9874;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 187189489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0038;AVGPOST=0.9970;RSQ=0.7335;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187189501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5980;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187189590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0085;AVGPOST=0.9990;RSQ=0.9582;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 187189756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8721;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187189761 . A AT 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4899;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187189803 . A AT 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0057;AVGPOST=0.9955;RSQ=0.6896;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187189896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187189949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0035;AVGPOST=0.9977;RSQ=0.7768;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187190095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4776;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187190303 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5794;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187190390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.806;LDAF=0.0112;AVGPOST=0.9963;RSQ=0.8806;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 187190430 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2556;AVGPOST=0.9944;RSQ=0.9888;ERATE=0.0006;THETA=0.0003;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 187190457 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.735;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6636;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187190460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0733;AVGPOST=0.9984;RSQ=0.9895;ERATE=0.0004;THETA=0.0004;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 187190501 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0093;AVGPOST=0.9968;RSQ=0.8816;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 187190513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0042;AVGPOST=0.9946;RSQ=0.5734;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187190560 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6314;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187190563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2760;AVGPOST=0.9971;RSQ=0.9943;ERATE=0.0005;THETA=0.0003;AC=603;AN=2184 GT:DS:GL:BD 0.27609891 0
1 187190783 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187190845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8509;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187190884 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7234;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187190905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6719;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187190955 . AT A 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6814;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187191079 . TG T 23 PASS INDEL;BAVGPOST=0.998;BRSQ=0.691;LDAF=0.0053;AVGPOST=0.9946;RSQ=0.5958;ERATE=0.0011;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187191087 . TAAACAAGC T 2199 PASS INDEL;BAVGPOST=0.995;BRSQ=0.879;LDAF=0.0131;AVGPOST=0.9954;RSQ=0.8738;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 187191093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.967;LDAF=0.1229;AVGPOST=0.9981;RSQ=0.9915;ERATE=0.0005;THETA=0.0003;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 187191098 . AC A 185 PASS INDEL;BAVGPOST=0.995;BRSQ=0.878;LDAF=0.0122;AVGPOST=0.9965;RSQ=0.9008;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187191146 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8578;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187191179 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0327;AVGPOST=0.9994;RSQ=0.9910;ERATE=0.0004;THETA=0.0008;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 187191276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187191533 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7323;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187191558 . TTTG T 69 PASS INDEL;BAVGPOST=0.994;BRSQ=0.617;LDAF=0.0178;AVGPOST=0.9786;RSQ=0.5398;ERATE=0.0058;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 187191678 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8161;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187191791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0212;AVGPOST=0.9992;RSQ=0.9823;ERATE=0.0002;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 187192021 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0105;AVGPOST=0.9995;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 187192036 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0069;AVGPOST=0.9980;RSQ=0.9034;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187192038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187192058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6811;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187192074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0221;AVGPOST=0.9991;RSQ=0.9851;ERATE=0.0002;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187192091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0336;AVGPOST=0.9995;RSQ=0.9925;ERATE=0.0004;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 187192098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0190;AVGPOST=0.9986;RSQ=0.9705;ERATE=0.0002;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 187192100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4766;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187192190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.8052;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187192228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0331;AVGPOST=0.9988;RSQ=0.9859;ERATE=0.0003;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 187192280 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6409;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187192411 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0113;AVGPOST=0.9979;RSQ=0.9302;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 187192499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0340;AVGPOST=0.9987;RSQ=0.9824;ERATE=0.0003;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 187192655 . CTCTCTCTCTCTT C 36698 PASS INDEL;BAVGPOST=0.970;BRSQ=0.944;LDAF=0.3144;AVGPOST=0.9865;RSQ=0.9756;ERATE=0.0016;THETA=0.0002;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 187192715 . TTC T 103 PASS INDEL;BAVGPOST=0.991;BRSQ=0.670;LDAF=0.0279;AVGPOST=0.9659;RSQ=0.5124;ERATE=0.0084;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 187192808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5951;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187192828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.899;LDAF=0.0149;AVGPOST=0.9987;RSQ=0.9614;ERATE=0.0003;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 187192841 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187192982 . GGT G 4708 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0249;AVGPOST=0.9995;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 187193019 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8084;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187193041 rs111397091 CT C 11204 PASS INDEL;BAVGPOST=0.992;BRSQ=0.974;LDAF=0.1538;AVGPOST=0.9960;RSQ=0.9876;ERATE=0.0010;THETA=0.0006;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 187193071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4978;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187193072 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6298;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187193151 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1235;AVGPOST=0.9987;RSQ=0.9955;ERATE=0.0002;THETA=0.0003;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 187193179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9219;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187193245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8510;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187193436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187193552 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1532;AVGPOST=0.9979;RSQ=0.9934;ERATE=0.0004;THETA=0.0005;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 187193655 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5427;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187193699 . CTG C 179 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7542;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187193776 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8135;ERATE=0.0003;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187194003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187194004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0212;AVGPOST=0.9997;RSQ=0.9928;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 187194059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5311;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187194290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6248;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187194338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0617;AVGPOST=0.9994;RSQ=0.9956;ERATE=0.0003;THETA=0.0006;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 187194399 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8767;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187194536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0012;AVGPOST=0.9982;RSQ=0.4449;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187194560 . A ATAGGATCTT 12101 PASS INDEL;BAVGPOST=0.993;BRSQ=0.934;LDAF=0.0564;AVGPOST=0.9968;RSQ=0.9767;ERATE=0.0004;THETA=0.0005;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 187194600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0815;AVGPOST=0.9992;RSQ=0.9955;ERATE=0.0002;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 187194681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187194695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187194759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.4171;ERATE=0.0003;THETA=0.0038;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 187194983 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0151;AVGPOST=0.9991;RSQ=0.9724;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 187195107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0057;AVGPOST=0.9982;RSQ=0.8749;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187195109 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0848;AVGPOST=0.9959;RSQ=0.9795;ERATE=0.0006;THETA=0.0004;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 187195122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1225;AVGPOST=0.9955;RSQ=0.9836;ERATE=0.0007;THETA=0.0005;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 187195123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0031;AVGPOST=0.9974;RSQ=0.6749;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187195262 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6796;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187195349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.6405;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187195403 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0035;AVGPOST=0.9966;RSQ=0.6769;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187195418 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187195505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9609;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187195556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0778;AVGPOST=0.9988;RSQ=0.9942;ERATE=0.0002;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 187195617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187195690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3951;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0006;THETA=0.0003;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 187195762 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6518;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187195950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7177;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187195992 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0036;AVGPOST=0.9948;RSQ=0.5093;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187196022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0806;AVGPOST=0.9988;RSQ=0.9935;ERATE=0.0003;THETA=0.0002;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 187196134 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4650;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187196140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0842;AVGPOST=0.9973;RSQ=0.9887;ERATE=0.0003;THETA=0.0006;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 187196161 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6501;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187196172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5465;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187196205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0335;AVGPOST=0.9988;RSQ=0.9861;ERATE=0.0003;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 187196209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0159;AVGPOST=0.9990;RSQ=0.9710;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 187196233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6145;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187196272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2265;AVGPOST=0.9973;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 187196349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0002;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187196419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6954;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187196654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0622;AVGPOST=0.9989;RSQ=0.9917;ERATE=0.0005;THETA=0.0003;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 187196687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187196695 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.502;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5721;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187196789 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0186;AVGPOST=0.9994;RSQ=0.9847;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 187196996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6469;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187197228 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8558;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187197260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5608;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187197262 . CTG C 1589 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0151;AVGPOST=0.9997;RSQ=0.9911;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 187197417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0329;AVGPOST=0.9998;RSQ=0.9965;ERATE=0.0002;THETA=0.0001;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 187197692 rs35426785 C CTT 33993 PASS INDEL;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.3170;AVGPOST=0.9920;RSQ=0.9858;ERATE=0.0005;THETA=0.0005;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 187197738 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8825;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187197825 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5646;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187197826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187197862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187198219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187198229 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.7959;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187198262 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187198455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0221;AVGPOST=0.9996;RSQ=0.9912;ERATE=0.0002;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 187198495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0792;AVGPOST=0.9986;RSQ=0.9927;ERATE=0.0004;THETA=0.0006;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 187198604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7948;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187198625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187198693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0340;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0002;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 187198774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8297;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187198892 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187198946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3980;AVGPOST=0.9961;RSQ=0.9939;ERATE=0.0006;THETA=0.0005;AC=868;AN=2184 GT:DS:GL:BD 0.39743590 0
1 187198967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7839;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187199167 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8348;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187199238 . C CT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4910;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187199251 . G GA 7506 PASS INDEL;BAVGPOST=0.994;BRSQ=0.973;LDAF=0.1136;AVGPOST=0.9966;RSQ=0.9862;ERATE=0.0007;THETA=0.0006;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 187199305 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0248;AVGPOST=0.9997;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 187199320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7215;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187199330 . C CA 2309 PASS INDEL;BAVGPOST=0.996;BRSQ=0.870;LDAF=0.0179;AVGPOST=0.9922;RSQ=0.8398;ERATE=0.0006;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 187199425 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7831;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187199449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0618;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0002;THETA=0.0002;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 187199570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.858;LDAF=0.0101;AVGPOST=0.9950;RSQ=0.8172;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 187199693 . A AC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187199892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187199953 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0617;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0002;THETA=0.0002;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 187199975 . GT G 2287 PASS INDEL;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0200;AVGPOST=0.9981;RSQ=0.9632;ERATE=0.0004;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 187199979 . TTTG T 62 PASS INDEL;BAVGPOST=0.995;BRSQ=0.607;LDAF=0.0121;AVGPOST=0.9882;RSQ=0.6118;ERATE=0.0013;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 187199987 . TG T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6425;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187199998 . TTTTG T 6560 PASS INDEL;BAVGPOST=0.990;BRSQ=0.936;LDAF=0.0841;AVGPOST=0.9897;RSQ=0.9469;ERATE=0.0015;THETA=0.0010;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 187200059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4859;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187200073 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5805;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187200153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0825;AVGPOST=0.9949;RSQ=0.9735;ERATE=0.0006;THETA=0.0004;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 187200302 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5341;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187200351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.9991;AVGPOST=0.9985;RSQ=0.4214;ERATE=0.0004;THETA=0.0005;AC=2183;AN=2184 GT:DS:GL:BD 0.99954212 1
1 187200483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7300;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187200572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7455;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187200622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5761;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187200692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6305;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187201013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187201079 . GT G 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4616;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187201092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5736;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187201334 . CTG C 18 PASS INDEL;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3907;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187201417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0155;AVGPOST=0.9990;RSQ=0.9738;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 187201613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187201621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0340;AVGPOST=0.9995;RSQ=0.9926;ERATE=0.0003;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 187201641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5447;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187201699 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187201766 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.562;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.4216;ERATE=0.0010;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187201805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0217;AVGPOST=0.9978;RSQ=0.9587;ERATE=0.0004;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 187201854 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7070;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187201969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.553;LDAF=0.0154;AVGPOST=0.9821;RSQ=0.5505;ERATE=0.0016;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 187202012 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.547;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6043;ERATE=0.0009;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187202080 rs35409127 TC T 25036 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3151;AVGPOST=0.9955;RSQ=0.9918;ERATE=0.0006;THETA=0.0003;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 187202279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 187202345 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6942;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187202386 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.3977;AVGPOST=0.9926;RSQ=0.9875;ERATE=0.0017;THETA=0.0005;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 187202430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0153;AVGPOST=0.9996;RSQ=0.9898;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 187202440 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187202485 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0159;AVGPOST=0.9991;RSQ=0.9733;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 187202552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8971;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187202587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6023;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187202593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0224;AVGPOST=0.9990;RSQ=0.9823;ERATE=0.0002;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 187202718 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7774;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187202895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.886;LDAF=0.0156;AVGPOST=0.9959;RSQ=0.9039;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 187202914 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7431;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187202918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8031;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187202936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187202940 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0327;AVGPOST=0.9990;RSQ=0.9868;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 187203085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8346;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187203164 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8590;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187203285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8494;ERATE=0.0004;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187203427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6334;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187203463 . CTATT C 15165 PASS INDEL;BAVGPOST=0.992;BRSQ=0.974;LDAF=0.1431;AVGPOST=0.9958;RSQ=0.9863;ERATE=0.0007;THETA=0.0002;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 187203581 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.801;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8774;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187203678 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.909;LDAF=0.0223;AVGPOST=0.9976;RSQ=0.9545;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 187203742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7951;AVGPOST=0.9887;RSQ=0.9749;ERATE=0.0013;THETA=0.0005;AC=1742;AN=2184 GT:DS:GL:BD 0.79761904 1
1 187203963 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0810;AVGPOST=0.9985;RSQ=0.9934;ERATE=0.0002;THETA=0.0004;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 187204192 . A ATT 2310 PASS INDEL;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0831;AVGPOST=0.9986;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 187204260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.9127;ERATE=0.0002;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187204401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.0804;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0002;THETA=0.0004;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 187204402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187204445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8295;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187204474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4818;AVGPOST=0.9979;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=1052;AN=2184 GT:DS:GL:BD 0.48168498 0
1 187204486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9911;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 187204526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187204533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6245;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187204534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187204691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9235;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187204959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7720;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187204984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.6983;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187205033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6624;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187205064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4885;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187205129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7197;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187205137 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0048;AVGPOST=0.9971;RSQ=0.7819;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 187205152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7629;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187205410 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1484;AVGPOST=0.9987;RSQ=0.9953;ERATE=0.0005;THETA=0.0003;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 187205463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0113;AVGPOST=0.9992;RSQ=0.9694;ERATE=0.0004;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 187205464 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6469;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187205724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0017;AVGPOST=0.9997;RSQ=0.9311;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187205753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187205814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9415;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 187205841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7601;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187205868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8220;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187205883 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4006;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=875;AN=2184 GT:DS:GL:BD 0.40064102 0
1 187206087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187206187 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0213;AVGPOST=0.9994;RSQ=0.9903;ERATE=0.0002;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 187206334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 187206498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6318;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187206516 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7488;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 187206661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6622;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187206757 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.9073;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187206866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0895;AVGPOST=0.9988;RSQ=0.9937;ERATE=0.0003;THETA=0.0002;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 187207174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0327;AVGPOST=0.9972;RSQ=0.9676;ERATE=0.0004;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 187207182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0207;AVGPOST=0.9983;RSQ=0.9631;ERATE=0.0006;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 187207253 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5405;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187207280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.778;LDAF=0.0063;AVGPOST=0.9973;RSQ=0.8244;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 187207319 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5889;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187207451 . AAAAT A 10999 PASS INDEL;BAVGPOST=0.994;BRSQ=0.972;LDAF=0.1265;AVGPOST=0.9915;RSQ=0.9699;ERATE=0.0007;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 187207469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0152;AVGPOST=0.9993;RSQ=0.9779;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 187207490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8092;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187207506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.576;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4184;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187207537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0220;AVGPOST=0.9996;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 187207573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5806;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187207653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.744;LDAF=0.0057;AVGPOST=0.9963;RSQ=0.7459;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 187207760 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8012;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187207772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5567;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187207779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5393;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187208014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4001;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0004;THETA=0.0006;AC=875;AN=2184 GT:DS:GL:BD 0.40064102 0
1 187208303 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0201;AVGPOST=1.0000;RSQ=0.9989;ERATE=0.0002;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 187208397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7965;AVGPOST=0.9955;RSQ=0.9892;ERATE=0.0005;THETA=0.0003;AC=1739;AN=2184 GT:DS:GL:BD 0.79624540 1
1 187208586 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7268;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187208649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0038;AVGPOST=0.9973;RSQ=0.7090;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187208675 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0220;AVGPOST=0.9995;RSQ=0.9907;ERATE=0.0003;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 187208724 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6318;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187208768 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3985;AVGPOST=0.9963;RSQ=0.9937;ERATE=0.0007;THETA=0.0006;AC=870;AN=2184 GT:DS:GL:BD 0.39835164 0
1 187208868 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187208892 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5802;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187209044 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7533;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 187209108 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0845;AVGPOST=0.9974;RSQ=0.9892;ERATE=0.0004;THETA=0.0005;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 187209127 . A AG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187209319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5396;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187209360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0203;AVGPOST=0.9997;RSQ=0.9926;ERATE=0.0002;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 187209465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5406;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187209493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8224;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187209642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7420;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 187209646 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7441;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187209649 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6644;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187209952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1716;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 187209965 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7581;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187210098 . A AC 26 PASS INDEL;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6282;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187210107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187210186 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5635;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187210247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187210318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0033;AVGPOST=0.9966;RSQ=0.6253;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 187210350 . C CT 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4466;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187210385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0330;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 187210400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5935;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187210404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187210502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5487;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 187210553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 187210628 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3985;AVGPOST=0.9973;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=869;AN=2184 GT:DS:GL:BD 0.39789379 0
1 187210630 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6244;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 187210635 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9182;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 187210662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0155;AVGPOST=0.9975;RSQ=0.9390;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 187210684 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8989;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0